Query 036427
Match_columns 536
No_of_seqs 214 out of 2425
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 12:34:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036427.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036427hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02605 monogalactosyldiacylg 100.0 5.4E-44 1.2E-48 374.1 38.5 379 147-526 1-382 (382)
2 PRK13608 diacylglycerol glucos 100.0 2.8E-39 6E-44 339.4 35.9 365 143-525 4-371 (391)
3 PRK13609 diacylglycerol glucos 100.0 5.6E-37 1.2E-41 321.0 35.6 372 141-531 1-377 (380)
4 COG0707 MurG UDP-N-acetylgluco 100.0 2.4E-30 5.1E-35 264.7 29.1 343 145-524 1-356 (357)
5 PRK00726 murG undecaprenyldiph 100.0 2.7E-29 5.8E-34 260.7 33.2 345 144-524 1-356 (357)
6 cd03785 GT1_MurG MurG is an N- 100.0 6.1E-29 1.3E-33 256.8 33.6 338 146-517 1-349 (350)
7 PRK12446 undecaprenyldiphospho 100.0 1.7E-28 3.8E-33 253.3 34.6 340 144-521 1-351 (352)
8 cd04962 GT1_like_5 This family 100.0 3.1E-27 6.8E-32 245.3 36.1 350 145-525 1-370 (371)
9 PLN02871 UDP-sulfoquinovose:DA 100.0 2.7E-27 5.9E-32 254.3 36.2 339 142-521 56-429 (465)
10 TIGR01133 murG undecaprenyldip 100.0 1.1E-27 2.5E-32 247.1 30.9 338 145-519 1-348 (348)
11 TIGR03088 stp2 sugar transfera 100.0 9.9E-26 2.1E-30 235.1 36.0 344 145-525 2-372 (374)
12 PRK10307 putative glycosyl tra 100.0 3.8E-25 8.2E-30 234.0 36.4 358 145-525 1-407 (412)
13 TIGR03449 mycothiol_MshA UDP-N 100.0 1.9E-25 4.2E-30 235.5 33.8 344 156-525 20-401 (405)
14 cd04951 GT1_WbdM_like This fam 99.9 5.5E-25 1.2E-29 226.8 32.8 343 146-524 1-359 (360)
15 TIGR02472 sucr_P_syn_N sucrose 99.9 1.9E-24 4.1E-29 230.6 33.4 343 156-523 26-438 (439)
16 PRK15427 colanic acid biosynth 99.9 3.1E-24 6.7E-29 226.4 34.3 357 145-525 1-405 (406)
17 cd03796 GT1_PIG-A_like This fa 99.9 2.5E-24 5.3E-29 226.9 33.5 340 146-525 1-367 (398)
18 cd03807 GT1_WbnK_like This fam 99.9 1.7E-23 3.7E-28 214.0 35.5 340 146-523 1-364 (365)
19 cd03812 GT1_CapH_like This fam 99.9 1E-23 2.2E-28 217.6 33.9 322 146-507 1-346 (358)
20 PRK09922 UDP-D-galactose:(gluc 99.9 2.8E-24 6.1E-29 223.3 29.4 334 145-523 1-357 (359)
21 cd03820 GT1_amsD_like This fam 99.9 7.2E-24 1.6E-28 215.0 31.6 326 146-520 1-347 (348)
22 cd03819 GT1_WavL_like This fam 99.9 1.2E-23 2.6E-28 216.8 33.6 318 156-510 10-349 (355)
23 cd03823 GT1_ExpE7_like This fa 99.9 1.8E-23 3.9E-28 214.0 34.2 342 146-524 1-358 (359)
24 cd03814 GT1_like_2 This family 99.9 9E-24 2E-28 217.0 31.1 335 146-523 1-363 (364)
25 TIGR02149 glgA_Coryne glycogen 99.9 1.3E-23 2.9E-28 219.8 32.9 339 145-525 1-386 (388)
26 TIGR02468 sucrsPsyn_pln sucros 99.9 2E-23 4.4E-28 234.1 36.1 264 246-525 310-670 (1050)
27 cd03800 GT1_Sucrose_synthase T 99.9 2.4E-23 5.2E-28 217.9 34.2 339 156-520 21-397 (398)
28 cd03825 GT1_wcfI_like This fam 99.9 1.8E-23 3.8E-28 216.0 32.6 312 145-525 1-364 (365)
29 PRK14099 glycogen synthase; Pr 99.9 2.4E-23 5.2E-28 223.7 32.9 265 244-525 131-478 (485)
30 cd03822 GT1_ecORF704_like This 99.9 5.5E-23 1.2E-27 211.6 34.0 335 146-524 1-366 (366)
31 cd03801 GT1_YqgM_like This fam 99.9 5.7E-23 1.2E-27 209.3 33.9 343 146-524 1-374 (374)
32 cd05844 GT1_like_7 Glycosyltra 99.9 2.8E-23 6.2E-28 215.3 31.4 261 236-521 72-366 (367)
33 PRK00025 lpxB lipid-A-disaccha 99.9 3.9E-23 8.5E-28 216.2 32.6 350 144-526 1-378 (380)
34 PRK15179 Vi polysaccharide bio 99.9 5.5E-23 1.2E-27 226.6 35.1 277 232-524 386-692 (694)
35 PRK15490 Vi polysaccharide bio 99.9 6.7E-23 1.5E-27 216.7 34.0 275 235-525 269-575 (578)
36 cd03792 GT1_Trehalose_phosphor 99.9 3.7E-23 8.1E-28 215.8 30.9 342 146-525 1-371 (372)
37 cd03808 GT1_cap1E_like This fa 99.9 8.9E-23 1.9E-27 207.9 32.8 331 146-520 1-358 (359)
38 cd03805 GT1_ALG2_like This fam 99.9 6.2E-23 1.3E-27 215.0 30.9 348 145-518 1-391 (392)
39 PRK00654 glgA glycogen synthas 99.9 6.7E-23 1.5E-27 220.2 31.6 276 235-525 105-462 (466)
40 PLN02316 synthase/transferase 99.9 3.2E-22 6.9E-27 225.1 38.0 389 116-525 560-1033(1036)
41 cd03821 GT1_Bme6_like This fam 99.9 1.5E-22 3.2E-27 207.8 31.9 340 146-520 1-374 (375)
42 cd03816 GT1_ALG1_like This fam 99.9 1.9E-22 4.2E-27 213.5 33.3 339 143-509 2-401 (415)
43 cd03817 GT1_UGDG_like This fam 99.9 2.1E-22 4.5E-27 206.9 31.9 338 146-523 1-371 (374)
44 PRK05749 3-deoxy-D-manno-octul 99.9 6.6E-22 1.4E-26 210.2 36.3 335 145-524 51-422 (425)
45 cd03818 GT1_ExpC_like This fam 99.9 4E-22 8.6E-27 209.9 32.5 216 292-520 154-395 (396)
46 cd03799 GT1_amsK_like This is 99.9 1.1E-21 2.4E-26 201.7 34.3 328 146-518 1-354 (355)
47 cd03794 GT1_wbuB_like This fam 99.9 4.1E-22 8.9E-27 205.4 31.2 350 146-519 1-393 (394)
48 TIGR02470 sucr_synth sucrose s 99.9 1.1E-21 2.4E-26 216.2 35.8 278 233-524 369-746 (784)
49 cd03811 GT1_WabH_like This fam 99.9 4.7E-22 1E-26 201.8 30.4 322 146-506 1-346 (353)
50 PLN02949 transferase, transfer 99.9 1.5E-21 3.4E-26 207.9 35.2 359 143-525 32-456 (463)
51 TIGR03087 stp1 sugar transfera 99.9 9.5E-23 2.1E-27 214.7 25.2 274 231-525 89-396 (397)
52 TIGR00215 lpxB lipid-A-disacch 99.9 2.9E-22 6.2E-27 209.7 28.1 341 145-521 6-384 (385)
53 PRK15484 lipopolysaccharide 1, 99.9 2.4E-21 5.3E-26 202.8 35.1 267 237-526 87-378 (380)
54 PLN02939 transferase, transfer 99.9 1.9E-21 4.2E-26 215.2 35.8 282 234-525 596-966 (977)
55 TIGR02095 glgA glycogen/starch 99.9 5.1E-22 1.1E-26 213.9 30.4 277 234-525 114-472 (473)
56 cd03798 GT1_wlbH_like This fam 99.9 3.3E-21 7.1E-26 197.2 34.9 347 147-525 1-376 (377)
57 cd03809 GT1_mtfB_like This fam 99.9 4.5E-22 9.7E-27 204.7 27.4 331 146-520 1-364 (365)
58 cd03795 GT1_like_4 This family 99.9 2.1E-21 4.5E-26 199.9 32.2 328 146-515 1-356 (357)
59 PRK14098 glycogen synthase; Pr 99.9 2.5E-21 5.4E-26 208.4 33.2 280 235-525 128-485 (489)
60 TIGR00236 wecB UDP-N-acetylglu 99.9 1.6E-21 3.4E-26 203.1 28.9 344 145-521 1-363 (365)
61 cd03806 GT1_ALG11_like This fa 99.9 2.6E-21 5.6E-26 205.0 29.5 349 146-515 2-416 (419)
62 cd04955 GT1_like_6 This family 99.9 5.6E-21 1.2E-25 197.3 31.2 331 146-524 1-363 (363)
63 PLN02846 digalactosyldiacylgly 99.9 7.7E-21 1.7E-25 200.2 30.5 344 142-526 2-392 (462)
64 cd03802 GT1_AviGT4_like This f 99.9 2.5E-20 5.4E-25 190.4 33.0 311 145-523 1-334 (335)
65 PRK10125 putative glycosyl tra 99.9 2.8E-21 6.1E-26 203.5 26.6 334 145-525 1-404 (405)
66 cd03791 GT1_Glycogen_synthase_ 99.9 2.2E-20 4.7E-25 201.4 33.0 277 234-524 115-475 (476)
67 TIGR03492 conserved hypothetic 99.9 6.3E-20 1.4E-24 192.4 31.4 261 236-522 81-395 (396)
68 PLN00142 sucrose synthase 99.9 2.8E-20 6E-25 205.2 29.9 276 234-524 393-769 (815)
69 cd03813 GT1_like_3 This family 99.9 1.1E-20 2.5E-25 203.4 26.3 255 245-523 172-474 (475)
70 cd03786 GT1_UDP-GlcNAc_2-Epime 99.9 1.5E-20 3.3E-25 195.2 25.7 268 231-519 73-362 (363)
71 PLN02501 digalactosyldiacylgly 99.9 8.7E-19 1.9E-23 187.5 32.8 263 231-525 419-709 (794)
72 TIGR02918 accessory Sec system 99.8 4.6E-19 1E-23 190.8 28.0 261 236-525 201-499 (500)
73 cd04949 GT1_gtfA_like This fam 99.8 1E-18 2.3E-23 181.9 25.5 252 244-519 97-372 (372)
74 cd04946 GT1_AmsK_like This fam 99.8 8.1E-18 1.7E-22 177.8 28.3 210 290-520 179-406 (407)
75 cd03804 GT1_wbaZ_like This fam 99.8 5.5E-18 1.2E-22 175.1 25.4 184 292-507 151-342 (351)
76 cd03784 GT1_Gtf_like This fami 99.8 1.4E-17 3E-22 175.6 28.8 161 347-521 236-400 (401)
77 PLN02275 transferase, transfer 99.8 2.1E-17 4.5E-22 172.6 29.2 226 242-489 96-371 (371)
78 PHA01633 putative glycosyl tra 99.8 1E-16 2.3E-21 162.8 30.3 233 274-521 71-335 (335)
79 PF13528 Glyco_trans_1_3: Glyc 99.8 3.2E-18 7E-23 174.6 16.0 300 145-488 1-317 (318)
80 TIGR03590 PseG pseudaminic aci 99.8 4.7E-17 1E-21 162.9 23.8 263 146-459 1-273 (279)
81 PHA01630 putative group 1 glyc 99.8 8.9E-17 1.9E-21 164.6 23.9 214 290-525 89-330 (331)
82 COG1519 KdtA 3-deoxy-D-manno-o 99.7 1.3E-14 2.8E-19 147.3 32.1 329 145-519 50-415 (419)
83 PF06925 MGDG_synth: Monogalac 99.7 4.5E-17 9.7E-22 150.9 13.0 169 158-326 1-169 (169)
84 TIGR01426 MGT glycosyltransfer 99.7 1.1E-14 2.5E-19 153.1 30.2 165 348-524 223-391 (392)
85 COG0381 WecB UDP-N-acetylgluco 99.7 1.8E-14 3.8E-19 145.2 28.8 355 142-526 1-375 (383)
86 COG1819 Glycosyl transferases, 99.7 1.7E-15 3.8E-20 159.0 22.2 166 346-526 233-402 (406)
87 cd04950 GT1_like_1 Glycosyltra 99.7 8E-15 1.7E-19 153.2 24.8 248 244-525 100-371 (373)
88 TIGR00661 MJ1255 conserved hyp 99.7 1.3E-15 2.7E-20 156.0 16.3 300 146-490 1-313 (321)
89 TIGR03568 NeuC_NnaA UDP-N-acet 99.7 4.1E-14 9E-19 147.1 27.4 268 233-518 80-364 (365)
90 KOG1111 N-acetylglucosaminyltr 99.7 5.1E-15 1.1E-19 145.4 18.5 301 146-490 2-334 (426)
91 COG0763 LpxB Lipid A disacchar 99.7 1.1E-13 2.4E-18 139.2 28.0 351 144-524 1-380 (381)
92 COG4671 Predicted glycosyl tra 99.6 6.5E-14 1.4E-18 137.8 24.6 357 140-531 5-397 (400)
93 cd03793 GT1_Glycogen_synthase_ 99.6 6.1E-13 1.3E-17 141.5 32.2 281 234-523 136-584 (590)
94 cd03788 GT1_TPS Trehalose-6-Ph 99.6 1.6E-14 3.4E-19 154.8 19.1 262 246-522 131-458 (460)
95 PF02684 LpxB: Lipid-A-disacch 99.6 4.4E-13 9.6E-18 137.9 27.0 259 233-503 69-351 (373)
96 PF00534 Glycos_transf_1: Glyc 99.6 1.3E-14 2.9E-19 134.1 14.3 160 337-506 2-172 (172)
97 TIGR02400 trehalose_OtsA alpha 99.6 2.4E-13 5.2E-18 144.8 25.3 261 244-523 124-454 (456)
98 PRK09814 beta-1,6-galactofuran 99.6 2.2E-13 4.7E-18 140.2 22.6 232 237-509 54-315 (333)
99 PHA03392 egt ecdysteroid UDP-g 99.5 6E-12 1.3E-16 135.9 29.1 174 338-526 285-468 (507)
100 PF02350 Epimerase_2: UDP-N-ac 99.5 9.6E-14 2.1E-18 143.0 14.1 270 233-520 54-346 (346)
101 PRK01021 lpxB lipid-A-disaccha 99.5 5.8E-12 1.3E-16 134.8 28.0 260 233-505 297-584 (608)
102 PF04007 DUF354: Protein of un 99.5 1.7E-11 3.8E-16 124.5 29.7 328 145-523 1-334 (335)
103 COG3980 spsG Spore coat polysa 99.5 2.2E-13 4.7E-18 130.4 14.6 303 145-515 1-316 (318)
104 cd01635 Glycosyltransferase_GT 99.5 2.6E-12 5.6E-17 122.8 21.0 215 147-474 1-228 (229)
105 PRK14089 ipid-A-disaccharide s 99.4 6.7E-12 1.4E-16 128.5 20.1 252 236-521 68-346 (347)
106 PF04101 Glyco_tran_28_C: Glyc 99.4 1.4E-14 3.1E-19 133.8 -1.5 148 353-505 2-157 (167)
107 PLN03063 alpha,alpha-trehalose 99.4 5.6E-11 1.2E-15 134.6 24.2 265 243-524 143-476 (797)
108 KOG1387 Glycosyltransferase [C 99.4 4.3E-10 9.2E-15 110.4 25.6 366 141-525 40-458 (465)
109 KOG0853 Glycosyltransferase [C 99.3 6.1E-11 1.3E-15 124.0 16.8 225 293-524 208-466 (495)
110 PLN02670 transferase, transfer 99.3 7.1E-09 1.5E-13 110.6 31.0 180 339-527 267-467 (472)
111 PLN02448 UDP-glycosyltransfera 99.3 8.3E-09 1.8E-13 110.6 31.3 141 339-493 263-416 (459)
112 PLN03007 UDP-glucosyltransfera 99.2 2.7E-08 5.9E-13 107.3 34.3 147 338-493 273-441 (482)
113 COG0297 GlgA Glycogen synthase 99.2 1.1E-08 2.4E-13 108.6 30.0 279 245-532 129-484 (487)
114 PRK14501 putative bifunctional 99.2 3.3E-10 7.1E-15 128.2 19.6 264 244-525 130-462 (726)
115 PLN00414 glycosyltransferase f 99.2 5.1E-08 1.1E-12 103.7 33.0 179 318-505 219-416 (446)
116 KOG2941 Beta-1,4-mannosyltrans 99.2 1.3E-08 2.8E-13 100.2 25.6 219 290-517 165-437 (444)
117 PLN02208 glycosyltransferase f 99.2 3.2E-08 7E-13 105.1 31.0 201 294-505 193-415 (442)
118 PLN02863 UDP-glucoronosyl/UDP- 99.2 6.3E-08 1.4E-12 103.9 32.1 156 338-501 271-443 (477)
119 PLN02210 UDP-glucosyl transfer 99.2 6.4E-08 1.4E-12 103.4 31.5 162 340-510 259-439 (456)
120 PLN02562 UDP-glycosyltransfera 99.2 3.2E-08 6.8E-13 105.6 29.1 155 342-505 265-426 (448)
121 PLN00164 glucosyltransferase; 99.2 6.9E-08 1.5E-12 103.8 31.6 204 318-530 239-478 (480)
122 COG1817 Uncharacterized protei 99.1 4.5E-08 9.7E-13 95.6 26.1 308 145-494 1-316 (346)
123 PLN02173 UDP-glucosyl transfer 99.1 1.6E-07 3.4E-12 99.9 31.9 143 340-493 254-409 (449)
124 TIGR02398 gluc_glyc_Psyn gluco 99.1 5.4E-08 1.2E-12 103.8 28.1 264 243-524 128-481 (487)
125 COG0438 RfaG Glycosyltransfera 99.1 1.9E-08 4.1E-13 100.9 23.3 211 294-525 150-376 (381)
126 PLN02410 UDP-glucoronosyl/UDP- 99.1 3E-07 6.5E-12 98.1 32.1 190 294-493 203-411 (451)
127 PLN02992 coniferyl-alcohol glu 99.1 3.1E-07 6.7E-12 98.3 31.1 197 318-525 233-473 (481)
128 PLN02764 glycosyltransferase f 99.1 3.6E-07 7.7E-12 97.0 31.2 178 318-505 226-421 (453)
129 PF13692 Glyco_trans_1_4: Glyc 99.1 4.1E-10 9E-15 99.6 7.7 126 351-490 3-134 (135)
130 TIGR03713 acc_sec_asp1 accesso 99.0 9E-09 2E-13 111.3 18.3 202 293-522 271-518 (519)
131 PF13439 Glyco_transf_4: Glyco 99.0 6E-09 1.3E-13 95.6 13.3 157 147-331 1-176 (177)
132 PLN02152 indole-3-acetate beta 99.0 5.6E-07 1.2E-11 95.9 29.0 161 339-509 250-439 (455)
133 PRK10017 colanic acid biosynth 98.9 5.4E-06 1.2E-10 87.6 34.7 336 145-503 1-404 (426)
134 PF00201 UDPGT: UDP-glucoronos 98.9 1.9E-08 4.1E-13 109.3 14.8 172 338-524 264-443 (500)
135 PLN02534 UDP-glycosyltransfera 98.9 3.1E-06 6.6E-11 91.0 29.8 144 339-490 272-443 (491)
136 PLN02555 limonoid glucosyltran 98.9 6.4E-06 1.4E-10 88.4 32.0 145 339-493 266-430 (480)
137 PLN03004 UDP-glycosyltransfera 98.8 3.9E-07 8.4E-12 97.0 20.0 198 294-500 208-432 (451)
138 PLN03064 alpha,alpha-trehalose 98.8 1.2E-06 2.7E-11 99.6 24.3 265 242-523 226-559 (934)
139 PLN02554 UDP-glycosyltransfera 98.8 1.3E-06 2.8E-11 94.3 22.9 154 339-501 263-450 (481)
140 PLN02167 UDP-glycosyltransfera 98.7 2.1E-06 4.5E-11 92.6 21.8 219 293-521 214-468 (475)
141 PLN02207 UDP-glycosyltransfera 98.6 7E-06 1.5E-10 87.8 22.0 208 293-509 210-448 (468)
142 PF13579 Glyco_trans_4_4: Glyc 98.6 1.5E-07 3.2E-12 84.7 7.6 145 156-325 1-160 (160)
143 COG3660 Predicted nucleoside-d 98.6 2.3E-05 4.9E-10 75.0 22.0 257 145-454 1-273 (329)
144 TIGR02919 accessory Sec system 98.5 9.1E-06 2E-10 86.2 19.9 188 293-513 238-432 (438)
145 PF13524 Glyco_trans_1_2: Glyc 98.5 2.7E-07 5.9E-12 76.1 6.2 79 436-521 12-92 (92)
146 PF13844 Glyco_transf_41: Glyc 98.5 2.1E-06 4.6E-11 90.5 13.9 179 340-525 275-466 (468)
147 COG3914 Spy Predicted O-linked 98.4 0.00024 5.2E-09 75.2 27.6 268 237-525 326-613 (620)
148 PLN03015 UDP-glucosyl transfer 98.4 1.4E-05 3E-10 85.3 18.8 188 293-490 203-425 (470)
149 PRK10916 ADP-heptose:LPS hepto 98.4 9.8E-05 2.1E-09 76.5 24.6 274 145-457 1-291 (348)
150 PF04464 Glyphos_transf: CDP-G 98.3 7.3E-06 1.6E-10 85.6 13.7 221 291-521 131-369 (369)
151 TIGR02195 heptsyl_trn_II lipop 98.3 0.00027 5.8E-09 72.8 24.6 270 146-457 1-281 (334)
152 COG4370 Uncharacterized protei 98.2 0.00016 3.6E-09 70.6 18.3 212 293-522 177-410 (412)
153 PF06258 Mito_fiss_Elm1: Mitoc 98.1 0.00022 4.7E-09 72.4 19.4 191 242-456 53-259 (311)
154 KOG1192 UDP-glucuronosyl and U 98.1 6.9E-05 1.5E-09 81.4 16.7 168 350-525 277-455 (496)
155 PRK10422 lipopolysaccharide co 98.1 0.00087 1.9E-08 69.5 23.6 100 351-457 184-292 (352)
156 PF05693 Glycogen_syn: Glycoge 98.1 0.00096 2.1E-08 71.8 23.1 101 419-521 462-577 (633)
157 PF04413 Glycos_transf_N: 3-De 98.0 8.1E-05 1.8E-09 69.8 13.1 147 145-325 22-180 (186)
158 PRK10964 ADP-heptose:LPS hepto 98.0 0.0057 1.2E-07 62.6 26.7 100 350-458 178-284 (322)
159 TIGR02193 heptsyl_trn_I lipopo 97.9 0.0024 5.2E-08 65.2 22.8 129 349-489 178-319 (319)
160 COG0859 RfaF ADP-heptose:LPS h 97.9 0.0021 4.5E-08 66.3 21.6 268 144-457 1-281 (334)
161 PF00982 Glyco_transf_20: Glyc 97.8 0.0035 7.5E-08 67.4 22.3 264 246-524 141-473 (474)
162 cd03789 GT1_LPS_heptosyltransf 97.8 0.01 2.2E-07 59.3 23.5 86 366-458 139-229 (279)
163 PRK10117 trehalose-6-phosphate 97.7 0.0064 1.4E-07 64.8 21.9 268 243-525 119-453 (474)
164 KOG3349 Predicted glycosyltran 97.7 0.00026 5.5E-09 62.3 9.2 100 386-487 37-143 (170)
165 PF08660 Alg14: Oligosaccharid 97.7 0.00044 9.5E-09 63.8 11.1 72 236-309 82-161 (170)
166 TIGR02201 heptsyl_trn_III lipo 97.6 0.0079 1.7E-07 62.1 20.0 101 350-457 181-290 (344)
167 PLN02205 alpha,alpha-trehalose 97.6 0.033 7.1E-07 64.2 26.5 264 242-521 195-547 (854)
168 PRK02797 4-alpha-L-fucosyltran 97.5 0.025 5.5E-07 56.4 21.4 254 234-525 27-316 (322)
169 COG4641 Uncharacterized protei 97.5 0.0099 2.1E-07 60.5 18.8 302 152-508 10-343 (373)
170 COG0380 OtsA Trehalose-6-phosp 97.5 0.062 1.3E-06 57.3 25.3 276 233-525 136-479 (486)
171 PF07429 Glyco_transf_56: 4-al 97.4 0.045 9.9E-07 55.4 21.8 233 235-490 67-332 (360)
172 KOG4626 O-linked N-acetylgluco 97.3 0.03 6.6E-07 60.0 20.1 177 340-524 749-939 (966)
173 PF13477 Glyco_trans_4_2: Glyc 97.2 0.0017 3.6E-08 57.4 8.9 107 146-282 1-108 (139)
174 PF09314 DUF1972: Domain of un 97.0 0.012 2.6E-07 54.8 12.8 163 144-327 1-185 (185)
175 COG2099 CobK Precorrin-6x redu 96.2 1.3 2.8E-05 43.1 21.6 42 236-281 56-101 (257)
176 COG5017 Uncharacterized conser 96.2 0.025 5.4E-07 49.2 7.9 94 386-487 31-134 (161)
177 PF03033 Glyco_transf_28: Glyc 96.1 0.022 4.7E-07 50.3 7.7 34 147-184 1-34 (139)
178 TIGR02094 more_P_ylases alpha- 95.7 0.56 1.2E-05 52.1 18.2 169 346-523 385-598 (601)
179 PF01075 Glyco_transf_9: Glyco 95.7 0.44 9.5E-06 46.4 15.6 102 348-456 103-212 (247)
180 TIGR00715 precor6x_red precorr 95.7 2.5 5.4E-05 41.7 24.6 53 426-489 197-255 (256)
181 PF04230 PS_pyruv_trans: Polys 95.3 2.9 6.4E-05 40.5 20.8 152 291-454 124-284 (286)
182 COG2327 WcaK Polysaccharide py 95.2 4.5 9.8E-05 42.0 30.1 234 246-498 89-357 (385)
183 COG1887 TagB Putative glycosyl 95.1 2.4 5.2E-05 44.5 19.5 219 294-521 148-386 (388)
184 TIGR03609 S_layer_CsaB polysac 95.0 4.6 9.9E-05 40.6 21.0 165 274-454 100-277 (298)
185 PF08323 Glyco_transf_5: Starc 94.7 0.39 8.4E-06 47.1 11.5 77 233-310 118-231 (245)
186 PF05159 Capsule_synth: Capsul 93.9 0.59 1.3E-05 46.4 11.2 46 408-454 181-226 (269)
187 PF02571 CbiJ: Precorrin-6x re 93.6 7.9 0.00017 38.0 21.2 44 236-283 56-103 (249)
188 cd04299 GT1_Glycogen_Phosphory 93.1 3 6.6E-05 47.6 16.3 169 346-522 474-686 (778)
189 PRK06849 hypothetical protein; 87.5 2.9 6.3E-05 43.9 9.3 84 142-255 2-85 (389)
190 TIGR03646 YtoQ_fam YtoQ family 81.8 10 0.00022 33.0 8.1 66 419-489 68-143 (144)
191 TIGR00730 conserved hypothetic 81.0 32 0.0007 31.9 12.1 46 410-455 80-135 (178)
192 PRK08057 cobalt-precorrin-6x r 79.3 29 0.00062 34.1 11.7 53 426-489 190-247 (248)
193 PF11071 DUF2872: Protein of u 79.0 4.9 0.00011 34.8 5.4 65 420-489 66-140 (141)
194 PF06564 YhjQ: YhjQ protein; 78.7 42 0.00091 32.8 12.5 39 145-186 1-40 (243)
195 COG0373 HemA Glutamyl-tRNA red 77.4 1E+02 0.0022 32.6 17.0 137 339-505 168-317 (414)
196 PRK13195 pyrrolidone-carboxyla 76.2 5.8 0.00013 38.2 5.7 29 144-172 1-30 (222)
197 PRK13196 pyrrolidone-carboxyla 75.8 6.2 0.00013 37.7 5.8 29 144-172 1-30 (211)
198 COG0796 MurI Glutamate racemas 75.8 53 0.0012 32.5 12.3 98 142-282 3-100 (269)
199 PF12038 DUF3524: Domain of un 75.5 26 0.00056 32.0 9.3 34 145-184 1-34 (168)
200 PF00862 Sucrose_synth: Sucros 74.4 10 0.00022 40.7 7.4 124 153-283 294-434 (550)
201 PF00551 Formyl_trans_N: Formy 73.7 7.3 0.00016 36.2 5.7 21 235-255 68-88 (181)
202 PF02844 GARS_N: Phosphoribosy 73.5 29 0.00064 28.9 8.5 33 236-269 52-86 (100)
203 COG1091 RfbD dTDP-4-dehydrorha 73.3 16 0.00034 36.5 8.1 18 237-254 41-58 (281)
204 PF10087 DUF2325: Uncharacteri 72.8 12 0.00025 30.9 6.1 36 419-454 41-83 (97)
205 PF15024 Glyco_transf_18: Glyc 68.2 35 0.00075 37.3 9.8 108 411-527 324-457 (559)
206 TIGR00725 conserved hypothetic 68.0 94 0.002 28.2 11.5 39 418-456 83-125 (159)
207 COG2894 MinD Septum formation 67.2 31 0.00067 33.2 8.1 37 145-184 2-39 (272)
208 PRK13940 glutamyl-tRNA reducta 66.6 1.2E+02 0.0025 32.3 13.4 64 388-455 207-273 (414)
209 PRK10017 colanic acid biosynth 66.1 66 0.0014 34.3 11.5 40 419-458 110-160 (426)
210 COG1927 Mtd Coenzyme F420-depe 65.5 34 0.00073 32.3 7.8 94 435-532 75-175 (277)
211 PF05014 Nuc_deoxyrib_tr: Nucl 65.3 8.3 0.00018 32.6 3.8 35 421-455 56-98 (113)
212 KOG3339 Predicted glycosyltran 64.5 34 0.00075 31.7 7.6 28 144-173 38-65 (211)
213 PF04321 RmlD_sub_bind: RmlD s 63.1 33 0.00072 34.2 8.3 31 145-183 1-31 (286)
214 TIGR00853 pts-lac PTS system, 61.8 30 0.00064 28.5 6.3 67 387-454 5-83 (95)
215 COG2120 Uncharacterized protei 61.3 1.1E+02 0.0025 29.6 11.4 25 231-255 94-118 (237)
216 cd05565 PTS_IIB_lactose PTS_II 60.6 30 0.00065 28.8 6.1 66 387-454 2-80 (99)
217 PF01470 Peptidase_C15: Pyrogl 59.3 17 0.00036 34.5 5.0 36 145-180 1-37 (202)
218 PRK05647 purN phosphoribosylgl 59.3 14 0.00031 34.9 4.6 20 236-255 70-89 (200)
219 PF12146 Hydrolase_4: Putative 58.6 32 0.00069 27.2 5.8 38 144-185 15-52 (79)
220 PRK12767 carbamoyl phosphate s 58.5 29 0.00063 35.1 7.1 34 144-185 1-34 (326)
221 TIGR03018 pepcterm_TyrKin exop 58.2 1.3E+02 0.0027 28.3 11.0 39 145-186 35-75 (207)
222 PF10093 DUF2331: Uncharacteri 58.2 1E+02 0.0023 32.1 10.8 109 337-455 168-291 (374)
223 PRK13193 pyrrolidone-carboxyla 55.6 27 0.00059 33.3 5.7 28 145-172 1-29 (209)
224 PLN00203 glutamyl-tRNA reducta 55.6 3.2E+02 0.0068 30.0 14.8 38 418-455 321-369 (519)
225 COG4635 HemG Flavodoxin [Energ 55.4 21 0.00045 32.3 4.5 39 145-186 1-39 (175)
226 COG1087 GalE UDP-glucose 4-epi 55.3 35 0.00075 34.4 6.5 19 236-254 57-75 (329)
227 COG0027 PurT Formate-dependent 54.3 57 0.0012 33.0 7.8 91 142-271 10-100 (394)
228 PRK13194 pyrrolidone-carboxyla 54.3 29 0.00063 33.1 5.7 28 145-172 1-29 (208)
229 PF12000 Glyco_trans_4_3: Gkyc 52.0 29 0.00062 32.0 5.1 80 244-330 64-169 (171)
230 PRK05294 carB carbamoyl phosph 51.9 58 0.0013 39.2 9.0 42 142-186 552-598 (1066)
231 PRK13197 pyrrolidone-carboxyla 51.5 36 0.00079 32.6 5.9 29 144-172 1-30 (215)
232 cd05564 PTS_IIB_chitobiose_lic 51.3 42 0.0009 27.6 5.5 66 388-454 2-79 (96)
233 PRK12815 carB carbamoyl phosph 51.3 75 0.0016 38.2 9.8 41 143-186 554-599 (1068)
234 PF07355 GRDB: Glycine/sarcosi 51.0 1.2E+02 0.0027 31.1 9.8 19 236-254 70-88 (349)
235 PRK01372 ddl D-alanine--D-alan 50.9 35 0.00076 34.2 6.1 40 142-184 2-44 (304)
236 PRK06988 putative formyltransf 50.9 56 0.0012 33.2 7.5 18 237-254 68-85 (312)
237 COG2086 FixA Electron transfer 50.4 2E+02 0.0043 28.5 11.0 108 157-283 37-148 (260)
238 PRK13768 GTPase; Provisional 49.6 1.3E+02 0.0027 29.5 9.7 40 144-186 1-40 (253)
239 TIGR00655 PurU formyltetrahydr 49.4 1E+02 0.0023 30.8 9.1 21 236-256 150-170 (280)
240 PRK00994 F420-dependent methyl 49.4 68 0.0015 31.0 7.1 53 435-489 75-128 (277)
241 PLN02735 carbamoyl-phosphate s 49.0 45 0.00097 40.2 7.4 40 143-185 22-66 (1102)
242 TIGR03609 S_layer_CsaB polysac 48.5 1.6E+02 0.0034 29.3 10.5 79 366-457 15-110 (298)
243 PRK13789 phosphoribosylamine-- 48.1 62 0.0013 34.5 7.7 18 237-254 59-76 (426)
244 COG1519 KdtA 3-deoxy-D-manno-o 47.9 2.1E+02 0.0046 30.2 11.2 99 349-454 48-154 (419)
245 TIGR02049 gshA_ferroox glutama 47.9 7.6 0.00016 39.8 0.7 171 104-317 23-211 (403)
246 PF03641 Lysine_decarbox: Poss 47.3 74 0.0016 27.8 6.9 45 411-455 38-93 (133)
247 PRK06756 flavodoxin; Provision 47.1 38 0.00083 30.0 5.1 38 144-184 1-38 (148)
248 PLN02929 NADH kinase 47.0 62 0.0013 32.7 7.0 69 422-490 60-136 (301)
249 COG0299 PurN Folate-dependent 46.7 2.6E+02 0.0056 26.4 14.2 76 234-327 67-144 (200)
250 cd01080 NAD_bind_m-THF_DH_Cycl 46.6 1.4E+02 0.003 27.4 8.7 65 389-456 47-117 (168)
251 PF01993 MTD: methylene-5,6,7, 46.3 39 0.00085 32.6 5.1 94 435-532 74-174 (276)
252 PRK04539 ppnK inorganic polyph 46.1 51 0.0011 33.3 6.3 55 422-490 64-123 (296)
253 COG0716 FldA Flavodoxins [Ener 44.5 34 0.00074 30.5 4.4 33 144-179 1-33 (151)
254 PLN02727 NAD kinase 44.3 2.7E+02 0.0058 32.7 12.0 57 420-490 737-798 (986)
255 PRK13010 purU formyltetrahydro 44.2 1.2E+02 0.0025 30.6 8.5 20 236-255 159-178 (289)
256 cd02037 MRP-like MRP (Multiple 44.1 1.1E+02 0.0024 27.6 7.8 37 147-186 2-38 (169)
257 COG2039 Pcp Pyrrolidone-carbox 43.6 64 0.0014 30.2 5.9 69 145-256 1-70 (207)
258 PRK02649 ppnK inorganic polyph 43.4 52 0.0011 33.3 5.9 55 422-490 64-123 (305)
259 COG3414 SgaB Phosphotransferas 43.1 1.1E+02 0.0024 25.1 6.7 47 387-434 3-57 (93)
260 PRK04885 ppnK inorganic polyph 43.1 60 0.0013 32.2 6.2 52 425-490 34-92 (265)
261 PRK00865 glutamate racemase; P 42.8 3.4E+02 0.0073 26.7 12.1 37 143-185 4-40 (261)
262 PRK01911 ppnK inorganic polyph 42.7 59 0.0013 32.8 6.1 55 422-490 60-119 (292)
263 PRK03372 ppnK inorganic polyph 42.7 64 0.0014 32.7 6.4 53 424-490 70-127 (306)
264 PRK14077 pnk inorganic polypho 42.3 58 0.0013 32.7 6.0 55 422-490 60-119 (287)
265 PRK12815 carB carbamoyl phosph 42.2 51 0.0011 39.6 6.5 40 142-184 5-49 (1068)
266 PRK11519 tyrosine kinase; Prov 41.2 3.8E+02 0.0082 30.8 13.1 39 144-185 525-564 (719)
267 PLN02735 carbamoyl-phosphate s 40.8 62 0.0014 39.0 6.9 43 142-187 572-619 (1102)
268 PRK09590 celB cellobiose phosp 40.7 1.4E+02 0.003 25.1 7.1 67 387-454 3-83 (104)
269 PRK00994 F420-dependent methyl 40.7 2E+02 0.0043 28.0 8.8 21 237-257 51-71 (277)
270 PRK06395 phosphoribosylamine-- 40.5 55 0.0012 35.0 5.9 19 236-254 55-73 (435)
271 PRK06703 flavodoxin; Provision 40.4 53 0.0011 29.2 4.9 38 144-184 1-38 (151)
272 TIGR00486 YbgI_SA1388 dinuclea 40.3 3.6E+02 0.0078 26.3 13.0 30 425-454 187-217 (249)
273 PRK05294 carB carbamoyl phosph 39.8 46 0.00099 40.0 5.7 40 142-184 5-49 (1066)
274 PRK09271 flavodoxin; Provision 39.1 58 0.0013 29.4 5.1 37 145-184 1-37 (160)
275 PRK06027 purU formyltetrahydro 38.9 2.4E+02 0.0052 28.3 9.8 20 236-255 155-174 (286)
276 PRK09739 hypothetical protein; 38.6 67 0.0014 30.1 5.6 42 142-186 1-44 (199)
277 PF00731 AIRC: AIR carboxylase 38.3 2.3E+02 0.0049 25.5 8.5 32 426-457 55-89 (150)
278 PRK09288 purT phosphoribosylgl 38.3 1.6E+02 0.0034 30.8 8.9 35 143-186 11-45 (395)
279 TIGR01007 eps_fam capsular exo 37.8 68 0.0015 30.0 5.5 38 145-185 17-55 (204)
280 TIGR00514 accC acetyl-CoA carb 37.8 81 0.0017 33.8 6.7 33 144-185 2-34 (449)
281 KOG2884 26S proteasome regulat 37.8 3.8E+02 0.0081 25.7 10.6 58 426-490 167-228 (259)
282 KOG3742 Glycogen synthase [Car 37.5 18 0.00039 38.1 1.5 38 419-456 493-534 (692)
283 PRK14075 pnk inorganic polypho 37.2 84 0.0018 30.9 6.2 52 425-490 40-93 (256)
284 PRK13011 formyltetrahydrofolat 36.6 2E+02 0.0043 28.9 8.8 20 236-255 155-174 (286)
285 TIGR00639 PurN phosphoribosylg 36.3 65 0.0014 30.2 5.0 20 236-255 69-88 (190)
286 PRK02155 ppnK NAD(+)/NADH kina 36.0 91 0.002 31.4 6.3 52 425-490 62-118 (291)
287 PLN02285 methionyl-tRNA formyl 35.8 3.1E+02 0.0067 28.2 10.3 18 237-254 84-101 (334)
288 TIGR01369 CPSaseII_lrg carbamo 35.8 74 0.0016 38.2 6.5 42 142-186 552-598 (1050)
289 COG1066 Sms Predicted ATP-depe 35.4 5.2E+02 0.011 27.5 11.6 34 147-184 95-128 (456)
290 PF03016 Exostosin: Exostosin 35.3 32 0.0007 34.2 3.0 37 419-455 229-270 (302)
291 PF04413 Glycos_transf_N: 3-De 35.1 2E+02 0.0044 26.7 8.1 97 351-454 22-126 (186)
292 PRK03378 ppnK inorganic polyph 34.8 82 0.0018 31.7 5.8 55 422-490 59-118 (292)
293 PRK02231 ppnK inorganic polyph 34.7 96 0.0021 30.9 6.2 55 422-490 38-97 (272)
294 PF02441 Flavoprotein: Flavopr 34.7 51 0.0011 28.5 3.8 33 145-182 1-33 (129)
295 PRK01185 ppnK inorganic polyph 34.7 93 0.002 31.0 6.0 51 426-490 52-104 (271)
296 PF03435 Saccharop_dh: Sacchar 34.4 4.1E+02 0.009 27.5 11.3 65 388-452 25-97 (386)
297 TIGR03837 efp_adjacent_2 conse 34.4 3.9E+02 0.0085 27.8 10.5 44 410-454 243-288 (371)
298 PLN02778 3,5-epimerase/4-reduc 34.3 97 0.0021 31.0 6.3 34 140-181 5-38 (298)
299 PF02302 PTS_IIB: PTS system, 33.9 1.7E+02 0.0036 23.1 6.5 64 388-453 2-74 (90)
300 PRK03767 NAD(P)H:quinone oxido 33.7 86 0.0019 29.4 5.5 37 144-184 1-39 (200)
301 COG0394 Wzb Protein-tyrosine-p 33.7 51 0.0011 29.2 3.6 28 143-171 1-28 (139)
302 COG0489 Mrp ATPases involved i 33.5 2.8E+02 0.006 27.4 9.2 39 144-185 56-95 (265)
303 TIGR01470 cysG_Nterm siroheme 33.2 4.2E+02 0.0091 25.0 14.8 100 385-490 32-145 (205)
304 cd03129 GAT1_Peptidase_E_like 32.7 3.7E+02 0.0081 25.2 9.8 37 418-454 72-122 (210)
305 PRK07206 hypothetical protein; 32.6 2E+02 0.0044 30.1 8.7 34 143-185 1-34 (416)
306 PRK03501 ppnK inorganic polyph 32.2 1.2E+02 0.0026 30.0 6.4 53 425-490 38-96 (264)
307 PRK08462 biotin carboxylase; V 32.1 1.4E+02 0.003 31.8 7.4 33 143-184 3-35 (445)
308 TIGR01319 glmL_fam conserved h 31.7 6.8E+02 0.015 27.0 16.8 37 420-456 213-258 (463)
309 PRK13886 conjugal transfer pro 31.7 93 0.002 30.4 5.4 40 144-186 1-41 (241)
310 PF03358 FMN_red: NADPH-depend 31.0 1.3E+02 0.0029 26.4 6.0 39 145-186 1-41 (152)
311 KOG0780 Signal recognition par 30.6 2.7E+02 0.0058 29.3 8.5 39 142-183 98-136 (483)
312 CHL00072 chlL photochlorophyll 30.5 84 0.0018 31.5 5.0 38 145-186 1-38 (290)
313 PRK05568 flavodoxin; Provision 30.3 1.2E+02 0.0026 26.4 5.5 37 144-184 1-38 (142)
314 PRK08305 spoVFB dipicolinate s 30.1 1E+02 0.0022 29.1 5.2 36 143-182 4-39 (196)
315 PRK09620 hypothetical protein; 30.1 1.3E+02 0.0029 29.0 6.1 22 160-184 30-51 (229)
316 COG4394 Uncharacterized protei 30.1 5.9E+02 0.013 25.7 14.3 46 409-455 238-285 (370)
317 COG2185 Sbm Methylmalonyl-CoA 29.7 62 0.0013 28.8 3.4 39 142-184 10-48 (143)
318 PRK00045 hemA glutamyl-tRNA re 29.6 7E+02 0.015 26.4 14.8 39 418-456 234-281 (423)
319 COG0223 Fmt Methionyl-tRNA for 29.4 2E+02 0.0043 29.2 7.4 18 237-254 70-87 (307)
320 PF00448 SRP54: SRP54-type pro 29.3 3.7E+02 0.0079 25.2 8.9 37 145-184 1-37 (196)
321 PF02441 Flavoprotein: Flavopr 29.3 3.1E+02 0.0067 23.5 7.9 36 419-454 66-118 (129)
322 PRK08105 flavodoxin; Provision 29.3 95 0.0021 27.7 4.7 38 144-184 1-38 (149)
323 cd01409 SIRT4 SIRT4: Eukaryoti 29.2 95 0.0021 30.7 5.1 49 408-456 180-241 (260)
324 PRK01231 ppnK inorganic polyph 29.2 1.3E+02 0.0027 30.4 6.0 53 424-490 60-117 (295)
325 COG3640 CooC CO dehydrogenase 29.1 1.2E+02 0.0026 29.6 5.4 39 145-186 1-39 (255)
326 PRK00676 hemA glutamyl-tRNA re 29.0 6.6E+02 0.014 25.9 14.0 94 422-528 222-321 (338)
327 PRK03359 putative electron tra 28.9 91 0.002 30.7 4.8 107 157-282 36-148 (256)
328 COG0496 SurE Predicted acid ph 28.9 1.2E+02 0.0026 29.8 5.5 34 145-184 1-34 (252)
329 cd02032 Bchl_like This family 28.5 98 0.0021 30.3 5.1 38 145-186 1-38 (267)
330 PLN02935 Bifunctional NADH kin 28.4 1.3E+02 0.0028 32.7 6.1 54 423-490 259-317 (508)
331 COG0541 Ffh Signal recognition 28.4 5E+02 0.011 27.7 10.2 92 145-255 100-191 (451)
332 cd05566 PTS_IIB_galactitol PTS 28.3 2.3E+02 0.005 22.4 6.4 62 387-454 2-71 (89)
333 PRK05920 aromatic acid decarbo 28.2 1.1E+02 0.0024 29.1 5.1 35 143-182 2-36 (204)
334 PRK12342 hypothetical protein; 28.1 97 0.0021 30.5 4.8 46 234-283 97-146 (254)
335 PRK05562 precorrin-2 dehydroge 27.9 5.5E+02 0.012 24.7 14.4 67 384-455 47-119 (223)
336 COG0788 PurU Formyltetrahydrof 27.6 3.3E+02 0.0071 27.0 8.1 27 137-165 83-109 (287)
337 TIGR00959 ffh signal recogniti 27.4 5.7E+02 0.012 27.3 10.8 40 144-186 98-138 (428)
338 PRK08057 cobalt-precorrin-6x r 27.4 1.6E+02 0.0034 28.9 6.2 43 236-282 55-101 (248)
339 PRK03202 6-phosphofructokinase 27.3 6.8E+02 0.015 25.5 12.3 36 144-182 1-37 (320)
340 COG1703 ArgK Putative periplas 27.2 6.3E+02 0.014 25.7 10.2 45 141-187 48-92 (323)
341 PRK09004 FMN-binding protein M 27.1 1.1E+02 0.0023 27.2 4.6 38 144-184 1-38 (146)
342 PF06626 DUF1152: Protein of u 27.0 2.5E+02 0.0053 28.4 7.5 26 155-183 7-32 (297)
343 PTZ00408 NAD-dependent deacety 26.8 2E+02 0.0044 28.0 6.8 49 408-456 150-209 (242)
344 cd03146 GAT1_Peptidase_E Type 26.7 5.5E+02 0.012 24.2 10.2 38 418-455 72-123 (212)
345 PF10649 DUF2478: Protein of u 25.9 1.1E+02 0.0024 27.8 4.5 36 420-455 86-132 (159)
346 PRK07308 flavodoxin; Validated 25.8 1.3E+02 0.0028 26.4 4.9 37 145-184 2-38 (146)
347 PRK05569 flavodoxin; Provision 25.8 1.6E+02 0.0034 25.6 5.5 38 144-184 1-38 (141)
348 TIGR01369 CPSaseII_lrg carbamo 25.6 1E+02 0.0023 37.0 5.4 40 143-185 5-49 (1050)
349 cd01965 Nitrogenase_MoFe_beta_ 25.5 8.2E+02 0.018 25.9 17.5 161 295-456 59-255 (428)
350 PRK13185 chlL protochlorophyll 25.4 1.4E+02 0.003 29.3 5.5 38 146-186 3-40 (270)
351 PRK13234 nifH nitrogenase redu 25.4 1.4E+02 0.0031 29.9 5.7 39 144-186 4-42 (295)
352 TIGR01286 nifK nitrogenase mol 25.4 9.2E+02 0.02 26.4 13.9 161 296-456 121-319 (515)
353 PF01408 GFO_IDH_MocA: Oxidore 25.2 3.9E+02 0.0084 22.0 9.2 63 384-453 24-93 (120)
354 PLN02496 probable phosphopanto 25.2 1.5E+02 0.0033 28.2 5.4 70 421-490 91-198 (209)
355 PF02374 ArsA_ATPase: Anion-tr 25.2 1.1E+02 0.0024 30.9 4.9 37 145-184 1-37 (305)
356 PLN02554 UDP-glycosyltransfera 25.1 1.1E+02 0.0024 33.1 5.2 38 144-183 2-39 (481)
357 TIGR03453 partition_RepA plasm 25.1 1.4E+02 0.0031 31.2 5.8 41 143-186 102-143 (387)
358 PRK10037 cell division protein 24.9 1.3E+02 0.0028 29.2 5.2 38 146-186 3-40 (250)
359 COG3613 Nucleoside 2-deoxyribo 24.8 81 0.0018 28.9 3.3 36 421-456 63-108 (172)
360 PRK00170 azoreductase; Reviewe 24.7 1.6E+02 0.0034 27.4 5.5 43 144-187 1-46 (201)
361 PRK08591 acetyl-CoA carboxylas 24.6 79 0.0017 33.8 3.9 33 144-185 2-34 (451)
362 PRK04761 ppnK inorganic polyph 24.6 1.6E+02 0.0034 28.9 5.6 51 426-490 25-81 (246)
363 PF11997 DUF3492: Domain of un 24.5 1.6E+02 0.0034 29.3 5.7 35 246-283 172-206 (268)
364 PF12996 DUF3880: DUF based on 24.2 1.7E+02 0.0037 22.9 4.8 43 291-335 15-57 (79)
365 cd05312 NAD_bind_1_malic_enz N 24.2 5.5E+02 0.012 25.7 9.3 18 237-254 96-113 (279)
366 COG0745 OmpR Response regulato 24.1 4.2E+02 0.0091 25.5 8.5 31 145-183 1-31 (229)
367 TIGR00460 fmt methionyl-tRNA f 24.0 5.1E+02 0.011 26.2 9.5 18 237-254 69-86 (313)
368 cd00501 Peptidase_C15 Pyroglut 23.7 2.2E+02 0.0048 26.6 6.3 28 145-172 1-29 (194)
369 PLN02260 probable rhamnose bio 23.6 1.9E+02 0.0042 32.6 6.9 31 142-180 378-408 (668)
370 COG2204 AtoC Response regulato 23.4 9.6E+02 0.021 25.9 11.6 79 410-490 30-121 (464)
371 PRK11670 antiporter inner memb 23.3 1.9E+02 0.0041 30.2 6.3 42 142-186 104-146 (369)
372 PRK00005 fmt methionyl-tRNA fo 23.3 4.8E+02 0.01 26.3 9.1 19 237-255 69-87 (309)
373 cd05212 NAD_bind_m-THF_DH_Cycl 23.2 4.8E+02 0.01 23.1 7.9 40 410-449 54-96 (140)
374 PRK05579 bifunctional phosphop 23.1 4.7E+02 0.01 27.6 9.2 133 348-489 5-181 (399)
375 TIGR01754 flav_RNR ribonucleot 23.1 1.3E+02 0.0028 26.3 4.3 33 145-180 1-33 (140)
376 PRK07313 phosphopantothenoylcy 23.0 1.5E+02 0.0034 27.4 5.0 34 144-182 1-34 (182)
377 TIGR01281 DPOR_bchL light-inde 23.0 1.5E+02 0.0032 29.0 5.2 38 145-186 1-38 (268)
378 TIGR01142 purT phosphoribosylg 22.9 3.1E+02 0.0067 28.3 7.9 32 146-186 1-32 (380)
379 PF00852 Glyco_transf_10: Glyc 22.8 96 0.0021 32.0 4.0 77 420-502 221-308 (349)
380 PRK13530 arsenate reductase; P 22.8 1.5E+02 0.0032 25.9 4.6 25 143-168 2-26 (133)
381 PLN00016 RNA-binding protein; 22.7 79 0.0017 32.8 3.4 40 142-185 50-89 (378)
382 PRK12446 undecaprenyldiphospho 22.7 4.1E+02 0.0089 27.3 8.7 28 427-454 92-122 (352)
383 cd07354 HN_L-delphilin-R1_like 22.7 3E+02 0.0065 21.9 5.6 46 479-524 6-51 (80)
384 COG1611 Predicted Rossmann fol 22.5 5.8E+02 0.013 24.2 8.8 41 411-451 95-140 (205)
385 TIGR03282 methan_mark_13 putat 22.4 3.8E+02 0.0083 27.6 7.8 82 438-525 97-187 (352)
386 COG2805 PilT Tfp pilus assembl 22.3 3.1E+02 0.0067 27.9 7.0 40 143-183 122-162 (353)
387 KOG4180 Predicted kinase [Gene 22.3 71 0.0015 32.3 2.6 55 398-455 80-138 (395)
388 TIGR01425 SRP54_euk signal rec 22.3 7.2E+02 0.016 26.6 10.3 38 145-185 100-137 (429)
389 TIGR01283 nifE nitrogenase mol 22.2 8.5E+02 0.018 26.0 11.2 98 143-282 325-422 (456)
390 cd01408 SIRT1 SIRT1: Eukaryoti 22.1 1.2E+02 0.0026 29.4 4.2 48 408-455 151-210 (235)
391 cd02040 NifH NifH gene encodes 22.1 1.6E+02 0.0035 28.6 5.3 38 145-186 2-39 (270)
392 PRK14982 acyl-ACP reductase; P 22.0 6.5E+02 0.014 26.0 9.7 38 418-455 207-246 (340)
393 PRK13556 azoreductase; Provisi 21.9 1.5E+02 0.0031 28.0 4.7 43 144-187 1-47 (208)
394 COG0205 PfkA 6-phosphofructoki 21.9 9E+02 0.019 25.0 11.8 37 143-182 1-38 (347)
395 PRK08535 translation initiatio 21.8 8.4E+02 0.018 24.7 11.0 54 397-453 162-229 (310)
396 PRK10342 glycerate kinase I; P 21.8 3.9E+02 0.0084 28.1 8.0 55 418-475 276-342 (381)
397 PRK13235 nifH nitrogenase redu 21.7 1.6E+02 0.0035 28.9 5.3 38 145-186 2-39 (274)
398 PRK14076 pnk inorganic polypho 21.6 1.9E+02 0.0041 32.1 6.2 51 426-490 348-403 (569)
399 COG0132 BioD Dethiobiotin synt 21.5 1.9E+02 0.004 27.9 5.3 36 144-182 1-37 (223)
400 PRK03708 ppnK inorganic polyph 21.4 1.7E+02 0.0036 29.2 5.2 51 426-490 57-111 (277)
401 PRK10867 signal recognition pa 21.4 7.7E+02 0.017 26.4 10.4 40 144-185 99-138 (433)
402 PF01745 IPT: Isopentenyl tran 21.4 1.7E+02 0.0037 28.2 4.9 34 145-184 1-34 (233)
403 PRK13230 nitrogenase reductase 21.4 1.8E+02 0.0038 28.8 5.5 38 145-186 2-39 (279)
404 PF02951 GSH-S_N: Prokaryotic 21.4 1.4E+02 0.003 25.8 4.0 34 145-183 1-38 (119)
405 COG0052 RpsB Ribosomal protein 21.4 3.2E+02 0.007 26.7 6.8 51 247-308 157-208 (252)
406 PRK09932 glycerate kinase II; 21.3 3.9E+02 0.0084 28.0 8.0 55 418-475 276-342 (381)
407 COG3563 KpsC Capsule polysacch 21.2 6.6E+02 0.014 27.3 9.4 46 406-453 205-251 (671)
408 TIGR00045 glycerate kinase. Th 21.2 3.7E+02 0.008 28.2 7.8 55 418-475 275-341 (375)
409 COG1440 CelA Phosphotransferas 21.2 4.2E+02 0.0092 22.1 6.5 45 410-454 31-81 (102)
410 TIGR03029 EpsG chain length de 21.1 1.9E+02 0.0042 28.3 5.7 39 144-185 102-141 (274)
411 PF03401 TctC: Tripartite tric 21.1 8E+02 0.017 24.1 12.6 143 351-506 79-246 (274)
412 PRK14569 D-alanyl-alanine synt 21.1 1.9E+02 0.004 29.0 5.6 39 143-184 2-43 (296)
413 PRK10818 cell division inhibit 21.0 1.9E+02 0.0041 28.2 5.6 39 145-186 2-41 (270)
414 PF01975 SurE: Survival protei 21.0 1.3E+02 0.0029 28.2 4.2 34 145-184 1-35 (196)
415 COG2266 GTP:adenosylcobinamide 20.9 3.1E+02 0.0067 25.4 6.3 94 393-488 50-167 (177)
416 COG0371 GldA Glycerol dehydrog 20.9 6E+02 0.013 26.5 9.1 69 387-456 32-118 (360)
417 COG1618 Predicted nucleotide k 20.9 3.2E+02 0.007 25.1 6.2 71 419-490 93-176 (179)
418 cd03145 GAT1_cyanophycinase Ty 20.8 7.2E+02 0.016 23.5 9.6 36 418-453 75-124 (217)
419 KOG1192 UDP-glucuronosyl and U 20.6 1.3E+02 0.0028 32.3 4.7 36 143-183 5-40 (496)
420 PRK01355 azoreductase; Reviewe 20.6 2.5E+02 0.0053 26.3 6.0 43 144-187 1-47 (199)
421 TIGR00511 ribulose_e2b2 ribose 20.5 8.8E+02 0.019 24.4 11.0 54 397-453 157-224 (301)
422 PRK13525 glutamine amidotransf 20.5 3.7E+02 0.008 24.9 7.1 62 387-454 5-80 (189)
423 PF01656 CbiA: CobQ/CobB/MinD/ 20.4 2E+02 0.0043 26.1 5.3 37 147-186 1-37 (195)
424 PF02585 PIG-L: GlcNAc-PI de-N 20.4 88 0.0019 26.7 2.7 26 232-257 86-111 (128)
425 PRK13232 nifH nitrogenase redu 20.3 1.7E+02 0.0037 28.7 5.1 38 145-186 2-39 (273)
426 TIGR03371 cellulose_yhjQ cellu 20.0 2E+02 0.0043 27.5 5.4 39 145-186 1-40 (246)
No 1
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=100.00 E-value=5.4e-44 Score=374.13 Aligned_cols=379 Identities=79% Similarity=1.322 Sum_probs=310.8
Q ss_pred EEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccchh
Q 036427 147 VLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSN 226 (536)
Q Consensus 147 IL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~ 226 (536)
|||++.++|+||...+.+|+++|.++.+++++|.+.|......++........|..+.+.+.+|...|..+.........
T Consensus 1 ilils~~~G~GH~~aa~al~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~Y~~~~~~p~~~~~~y~~~~~~~~~~~~ 80 (382)
T PLN02605 1 VLILMSDTGGGHRASAEAIKDAFQLEFGDEYQVFIVDLWKEHTPWPFNQLPRSYKFLVKHPQLWKMTYHGTNPRLIHQSY 80 (382)
T ss_pred CEEEEEcCCcChHHHHHHHHHHHHhhcCCCeeEEEEehhhhcCcchhhhHHHHHHHHhhCHHHHHHHHHhcCchhhhHHH
Confidence 68999999999999999999999876565688889998877666655557778988777744788777655433222222
Q ss_pred hhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcC--CCCCceEEEEecCCCCcccccccccCCEEEEcCHH
Q 036427 227 FAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKG--LLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTAD 304 (536)
Q Consensus 227 ~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g--~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~~ 304 (536)
.........+++.++|++++||+||+++|++..+|+.++...+ ...++|++++++|+...|..|+.+.+|.++++|+.
T Consensus 81 ~~~~~~~~~~~l~~~i~~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~~~w~~~~~d~~~~~s~~ 160 (382)
T PLN02605 81 FAATSAFVAREVAKGLMKYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCHPTWFHKGVTRCFCPSEE 160 (382)
T ss_pred HHHHHHHHHHHHHHHHHhcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcCcccccCCCCEEEECCHH
Confidence 2233444567888999999999999999987665544443321 12358999999999768999999999999999999
Q ss_pred HHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCC
Q 036427 305 VAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEP 384 (536)
Q Consensus 305 ~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~ 384 (536)
.++.+.+.|++++++.++|+|+++.+......++++++++|++++.++++++||+.+.+....+++++.+.+.+.....+
T Consensus 161 ~~~~l~~~g~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~ 240 (382)
T PLN02605 161 VAKRALKRGLEPSQIRVYGLPIRPSFARAVRPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKP 240 (382)
T ss_pred HHHHHHHcCCCHHHEEEECcccCHhhccCCCCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCC
Confidence 99999999999999999999999877654445678899999999999999999999988888888877654310000134
Q ss_pred CcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChh
Q 036427 385 IGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVP 464 (536)
Q Consensus 385 ~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~ 464 (536)
+.++++++|.++++.+.+++.....+|+++|+++++.++|+.||++|+++||+|++|||+||+|+|+++...++|.+|+.
T Consensus 241 ~~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G~~~~~~~l~~aaDv~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~ 320 (382)
T PLN02605 241 IGQVVVICGRNKKLQSKLESRDWKIPVKVRGFVTNMEEWMGACDCIITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVP 320 (382)
T ss_pred CceEEEEECCCHHHHHHHHhhcccCCeEEEeccccHHHHHHhCCEEEECCCcchHHHHHHcCCCEEEecCCCccchhhHH
Confidence 56677889988766666665544567999999999999999999999999999999999999999999988889989999
Q ss_pred hHhhCCceeecCCHHHHHHHHHHHhCCC-HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhc
Q 036427 465 YVVENGCGKFSKSPKEIANMVSQWFGPK-IDELKAMSQNALKLARPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 465 ~lv~~g~g~~~~d~~~La~~I~~ll~~d-~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~~ 526 (536)
.+++.|.|..+.|+++++++|.++++ + ++.+++|++++++++.+++++++++.+.+++++|
T Consensus 321 ~i~~~g~g~~~~~~~~la~~i~~ll~-~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~~~~ 382 (382)
T PLN02605 321 YVVDNGFGAFSESPKEIARIVAEWFG-DKSDELEAMSENALKLARPEAVFDIVHDLHELVRQR 382 (382)
T ss_pred HHHhCCceeecCCHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHhhCC
Confidence 99999999888999999999999999 7 9999999999999999999999999999988775
No 2
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=100.00 E-value=2.8e-39 Score=339.35 Aligned_cols=365 Identities=25% Similarity=0.389 Sum_probs=288.6
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhcc-ccceeecCCCccc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGP-LWKMTYYGTAPRV 221 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~-l~~~~~~~~~~~~ 221 (536)
.+|||||++.++|+||.+.|.+|+++|.++.+++.+|.++|......++........|....+..| +|...|+.+...
T Consensus 4 ~~~~vlil~~~~G~GH~~aA~al~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~Y~~~~~~~p~~y~~~y~~~~~~- 82 (391)
T PRK13608 4 QNKKILIITGSFGNGHMQVTQSIVNQLNDMNLDHLSVIEHDLFMEAHPILTSICKKWYINSFKYFRNMYKGFYYSRPDK- 82 (391)
T ss_pred CCceEEEEECCCCchHHHHHHHHHHHHHhhCCCCceEEEeehHHhcCchHHHHHHHHHHHHHHHhHHHHHHHHHcCchh-
Confidence 457999999999999999999999999987433478888898776555433335567877776655 676666543311
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEc
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCP 301 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~ 301 (536)
... ........+++.++|++++||+||+++|... +..+++.+.. ++|++++++|+. .+..|+.+.+|.+++.
T Consensus 83 ~~~---~~~~~~~~~~l~~~l~~~kPDvVi~~~p~~~---~~~l~~~~~~-~iP~~~v~td~~-~~~~w~~~~~d~~~v~ 154 (391)
T PRK13608 83 LDK---CFYKYYGLNKLINLLIKEKPDLILLTFPTPV---MSVLTEQFNI-NIPVATVMTDYR-LHKNWITPYSTRYYVA 154 (391)
T ss_pred hHH---HHHHHHHHHHHHHHHHHhCcCEEEECCcHHH---HHHHHHhcCC-CCCEEEEeCCCC-cccccccCCCCEEEEC
Confidence 111 1122223468889999999999999987642 2223333222 499999999985 8889999999999999
Q ss_pred CHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCC-CcHHHHHHHHHHHhhhcc
Q 036427 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGM-GPIEATARALGNALYDEN 380 (536)
Q Consensus 302 S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~-k~~~~~l~al~~~l~~~~ 380 (536)
++.+++.+.+.|++++++.++|+|+++.+.... ++.+++++++++++.+++++++|+.+. +.+..+++++.+.
T Consensus 155 s~~~~~~l~~~gi~~~ki~v~GiPv~~~f~~~~-~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~----- 228 (391)
T PRK13608 155 TKETKQDFIDVGIDPSTVKVTGIPIDNKFETPI-DQKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAK----- 228 (391)
T ss_pred CHHHHHHHHHcCCCHHHEEEECeecChHhcccc-cHHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhc-----
Confidence 999999999999999999999999987765432 355677889999888888888998884 6666666654321
Q ss_pred cCCCCcEEEEEecCCHHHHHHHHc-CCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccc
Q 036427 381 LGEPIGQVLVICGRNKKLANKLLS-TDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQE 459 (536)
Q Consensus 381 ~~~~~~~~lvi~G~~~~l~~~l~~-~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e 459 (536)
.+++++++++|.+.++.+.+++ .....+|++.||++++.++|+.||++|+.+||.|+.|||++|+|+|+++...++|
T Consensus 229 --~~~~~~vvv~G~~~~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~~aDl~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe 306 (391)
T PRK13608 229 --SANAQVVMICGKSKELKRSLTAKFKSNENVLILGYTKHMNEWMASSQLMITKPGGITISEGLARCIPMIFLNPAPGQE 306 (391)
T ss_pred --CCCceEEEEcCCCHHHHHHHHHHhccCCCeEEEeccchHHHHHHhhhEEEeCCchHHHHHHHHhCCCEEECCCCCCcc
Confidence 3567777888988655454443 2344689999999999999999999999999999999999999999997656677
Q ss_pred cCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 460 AGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 460 ~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
..|+..+.+.|.|..+.|+++++++|.++++ |++.+++|++++++.+.+++++++++.+.+++..
T Consensus 307 ~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~-~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~ 371 (391)
T PRK13608 307 LENALYFEEKGFGKIADTPEEAIKIVASLTN-GNEQLTNMISTMEQDKIKYATQTICRDLLDLIGH 371 (391)
T ss_pred hhHHHHHHhCCcEEEeCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhh
Confidence 7799999999999988999999999999999 9999999999999999999999999999888754
No 3
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=100.00 E-value=5.6e-37 Score=320.97 Aligned_cols=372 Identities=26% Similarity=0.404 Sum_probs=273.5
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceE-EEEeecccccCCCCCCcchhHHHHHHhhcc-ccceeecCCC
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQ-VFVTDLWSDHTPWPFNQLPRSYNFLVKHGP-LWKMTYYGTA 218 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~e-V~v~~~~~~~~~~~~~~~~~~y~~~~~~~~-l~~~~~~~~~ 218 (536)
|.++|||||+++++|+||...+.+|+++|.++ |++ +.++|......++........|....+..| +|+..+....
T Consensus 1 ~~~~~rili~t~~~G~GH~~~a~al~~~l~~~---g~~~~~~~d~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 77 (380)
T PRK13609 1 MIKNPKVLILTAHYGNGHVQVAKTLEQTFRQK---GIKDVIVCDLFGESHPVITEITKYLYLKSYTIGKELYRLFYYGVE 77 (380)
T ss_pred CCCCCeEEEEEcCCCchHHHHHHHHHHHHHhc---CCCcEEEEEhHHhcchHHHHHHHHHHHHHHHHhHHHHHHHHhccC
Confidence 34678999999999999999999999999998 554 566676544322211112223433333322 4444443222
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEE
Q 036427 219 PRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRC 298 (536)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~v 298 (536)
.... ............+++.+++++++||+||++++... ++.. .+..+. ++|++++++|+. .+..|+++.+|.+
T Consensus 78 ~~~~-~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~-~~~~-~~~~~~--~ip~~~~~td~~-~~~~~~~~~ad~i 151 (380)
T PRK13609 78 KIYD-KKIFSWYANFGRKRLKLLLQAEKPDIVINTFPIIA-VPEL-KKQTGI--SIPTYNVLTDFC-LHKIWVHREVDRY 151 (380)
T ss_pred cccc-hHHHHHHHHHHHHHHHHHHHHhCcCEEEEcChHHH-HHHH-HHhcCC--CCCeEEEeCCCC-CCcccccCCCCEE
Confidence 1111 11111122233478899999999999999987653 2322 222232 489998888875 7888999999999
Q ss_pred EEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCC-CcHHHHHHHHHHHhh
Q 036427 299 YCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGM-GPIEATARALGNALY 377 (536)
Q Consensus 299 i~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~-k~~~~~l~al~~~l~ 377 (536)
+++++..++.+.+.|++++++.++|+|+++.+.... ++..++++++++++.+++++++|+.+. +.+..+++++.+
T Consensus 152 ~~~s~~~~~~l~~~gi~~~ki~v~G~p~~~~f~~~~-~~~~~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~--- 227 (380)
T PRK13609 152 FVATDHVKKVLVDIGVPPEQVVETGIPIRSSFELKI-NPDIIYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLMS--- 227 (380)
T ss_pred EECCHHHHHHHHHcCCChhHEEEECcccChHHcCcC-CHHHHHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhh---
Confidence 999999999999999999999999999977554332 345678899999888888888887764 455555554431
Q ss_pred hcccCCCCcEEEEEecCCHHHHHHHHcC--CCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccC
Q 036427 378 DENLGEPIGQVLVICGRNKKLANKLLST--DWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 378 ~~~~~~~~~~~lvi~G~~~~l~~~l~~~--~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~ 455 (536)
.+++++++++|.+..+.+.+++. ....+|+++|+++++.++|+.||++|+.+|+.|++|||++|+|+|+++..
T Consensus 228 -----~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD~~v~~~gg~t~~EA~a~g~PvI~~~~~ 302 (380)
T PRK13609 228 -----VPDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENIDELFRVTSCMITKPGGITLSEAAALGVPVILYKPV 302 (380)
T ss_pred -----CCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechhhHHHHHHhccEEEeCCCchHHHHHHHhCCCEEECCCC
Confidence 35677777778665444444332 22358999999999999999999999988999999999999999998654
Q ss_pred CccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhcCCcCC
Q 036427 456 AGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPH 531 (536)
Q Consensus 456 ~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~~~~~~~ 531 (536)
++++..|+..+.+.|.+....|+++++++|.++++ |++.+++|++++++++..++++++++.+++.+....++.|
T Consensus 303 ~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~-~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~~~~~~ 377 (380)
T PRK13609 303 PGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQ-DDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVEPNLAQ 377 (380)
T ss_pred CCcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHC-CHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhhhhhHh
Confidence 45555577788888888877899999999999999 9999999999999999999999999999988765444433
No 4
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.98 E-value=2.4e-30 Score=264.75 Aligned_cols=343 Identities=24% Similarity=0.350 Sum_probs=252.5
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCce-EEEEeecccccCCCCCC--cchhHHHHHHhhccccceeecCCCccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEY-QVFVTDLWSDHTPWPFN--QLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~-eV~v~~~~~~~~~~~~~--~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
|+|++..+++ |||..++++|+++|.++ |+ +|.+............. ..... .....++.+. ..
T Consensus 1 ~~ivl~~gGT-GGHv~pAlAl~~~l~~~---g~~~v~~~~~~~~~e~~l~~~~~~~~~---~I~~~~~~~~-------~~ 66 (357)
T COG0707 1 KKIVLTAGGT-GGHVFPALALAEELAKR---GWEQVIVLGTGDGLEAFLVKQYGIEFE---LIPSGGLRRK-------GS 66 (357)
T ss_pred CeEEEEeCCC-ccchhHHHHHHHHHHhh---CccEEEEecccccceeeeccccCceEE---EEeccccccc-------Cc
Confidence 5788888888 79999999999999999 66 45444221111110000 00000 0000000000 00
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC-cccccccccCCEEEE
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST-CHPTWFHKLVTRCYC 300 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-~~~~~~~~~~d~vi~ 300 (536)
.......+.......+.+++|++++||+|++++++.+..+.+.++..+ +|++.+.+|... ...+++.+.++.|.+
T Consensus 67 ~~~~~~~~~~~~~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~----iPv~ihEqn~~~G~ank~~~~~a~~V~~ 142 (357)
T COG0707 67 LKLLKAPFKLLKGVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLG----IPVIIHEQNAVPGLANKILSKFAKKVAS 142 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCccccHHHHHHHhCC----CCEEEEecCCCcchhHHHhHHhhceeee
Confidence 000000112333445778899999999999999988876666666655 999887777642 344778899999998
Q ss_pred cCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcc
Q 036427 301 PTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDEN 380 (536)
Q Consensus 301 ~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~ 380 (536)
..+. ...+.+++++.++|+|++.++.. . +....+.... .++++|+++||+.|.+.+.+.+..+...+.
T Consensus 143 ~f~~-----~~~~~~~~~~~~tG~Pvr~~~~~-~-~~~~~~~~~~--~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~--- 210 (357)
T COG0707 143 AFPK-----LEAGVKPENVVVTGIPVRPEFEE-L-PAAEVRKDGR--LDKKTILVTGGSQGAKALNDLVPEALAKLA--- 210 (357)
T ss_pred cccc-----ccccCCCCceEEecCcccHHhhc-c-chhhhhhhcc--CCCcEEEEECCcchhHHHHHHHHHHHHHhh---
Confidence 8776 23456778899999999998876 1 1222332222 278899999999999999988888887764
Q ss_pred cCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCc-
Q 036427 381 LGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAG- 457 (536)
Q Consensus 381 ~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~- 457 (536)
.++++++++|... +..+.+.+.+. +.+.+|.++|.++|+.||++|+.+|++|+.|.+++|+|+|.+|.+..
T Consensus 211 ---~~~~v~~~~G~~~~~~~~~~~~~~~~---~~v~~f~~dm~~~~~~ADLvIsRaGa~Ti~E~~a~g~P~IliP~p~~~ 284 (357)
T COG0707 211 ---NRIQVIHQTGKNDLEELKSAYNELGV---VRVLPFIDDMAALLAAADLVISRAGALTIAELLALGVPAILVPYPPGA 284 (357)
T ss_pred ---hCeEEEEEcCcchHHHHHHHHhhcCc---EEEeeHHhhHHHHHHhccEEEeCCcccHHHHHHHhCCCEEEeCCCCCc
Confidence 2578889999986 33344444333 99999999999999999999999999999999999999999999755
Q ss_pred --cccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 458 --QEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 458 --~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
+|+.||..+++.|.+.++. +++.+.+.|.++++ +++.+++|++++++...+++.+++++.++.+.+
T Consensus 285 ~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~-~~~~l~~m~~~a~~~~~p~aa~~i~~~~~~~~~ 356 (357)
T COG0707 285 DGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLS-NPEKLKAMAENAKKLGKPDAAERIADLLLALAK 356 (357)
T ss_pred cchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhc
Confidence 7778999999999999986 57799999999999 999999999999999999999999999887654
No 5
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.97 E-value=2.7e-29 Score=260.65 Aligned_cols=345 Identities=20% Similarity=0.256 Sum_probs=237.2
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc-c
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV-I 222 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~-~ 222 (536)
||||+|.+.+. |||++.+..|++.|.++ ||+|.++............. ...+............. .
T Consensus 1 ~~~i~i~~~g~-gG~~~~~~~la~~L~~~---g~ev~vv~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~ 67 (357)
T PRK00726 1 MKKILLAGGGT-GGHVFPALALAEELKKR---GWEVLYLGTARGMEARLVPK---------AGIEFHFIPSGGLRRKGSL 67 (357)
T ss_pred CcEEEEEcCcc-hHhhhHHHHHHHHHHhC---CCEEEEEECCCchhhhcccc---------CCCcEEEEeccCcCCCChH
Confidence 58999999999 69999999999999998 78887765422100000000 00011111100000000 0
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCC-CcccccccccCCEEEEc
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLS-TCHPTWFHKLVTRCYCP 301 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~-~~~~~~~~~~~d~vi~~ 301 (536)
..............++.+++++++||+||+++.........+.+..+ +|++.+.++.. ....+|+++.+|.+++.
T Consensus 68 ~~l~~~~~~~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~----~p~v~~~~~~~~~~~~r~~~~~~d~ii~~ 143 (357)
T PRK00726 68 ANLKAPFKLLKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLG----IPLVIHEQNAVPGLANKLLARFAKKVATA 143 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcC----CCEEEEcCCCCccHHHHHHHHHhchheEC
Confidence 00001112234456778889999999999998544332233333333 78876555432 12346778899999998
Q ss_pred CHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhccc
Q 036427 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENL 381 (536)
Q Consensus 302 S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~ 381 (536)
++.... + .+..+++++|||++.+.+.+.. .+++++++++.++++++||+.+.+.....+..+.+.+.
T Consensus 144 ~~~~~~---~--~~~~~i~vi~n~v~~~~~~~~~----~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~---- 210 (357)
T PRK00726 144 FPGAFP---E--FFKPKAVVTGNPVREEILALAA----PPARLAGREGKPTLLVVGGSQGARVLNEAVPEALALLP---- 210 (357)
T ss_pred chhhhh---c--cCCCCEEEECCCCChHhhcccc----hhhhccCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh----
Confidence 875432 1 5778999999999987654322 22356777777888888887766655555533333332
Q ss_pred CCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCC---
Q 036427 382 GEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA--- 456 (536)
Q Consensus 382 ~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~--- 456 (536)
.. ...++++|.++ ++.+.++ .++ +|.+.|+++++.++|+.||++|+++|+++++|||++|+|+|+++.++
T Consensus 211 -~~-~~~~~~~G~g~~~~~~~~~~-~~~--~v~~~g~~~~~~~~~~~~d~~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~ 285 (357)
T PRK00726 211 -EA-LQVIHQTGKGDLEEVRAAYA-AGI--NAEVVPFIDDMAAAYAAADLVICRAGASTVAELAAAGLPAILVPLPHAAD 285 (357)
T ss_pred -hC-cEEEEEcCCCcHHHHHHHhh-cCC--cEEEeehHhhHHHHHHhCCEEEECCCHHHHHHHHHhCCCEEEecCCCCCc
Confidence 11 24466788875 3333343 333 39999999999999999999999999999999999999999998753
Q ss_pred ccccCChhhHhhCCceeecC--C--HHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 457 GQEAGNVPYVVENGCGKFSK--S--PKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 457 ~~e~~na~~lv~~g~g~~~~--d--~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
+.+.+++..+.+.|.|.+++ | +++|+++|+++++ |++.+++|++++++++++++.+++++.|.++++
T Consensus 286 ~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 286 DHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLS-DPERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred CcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHc-CHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 33445677888999998874 4 9999999999999 999999999999999999999999999998765
No 6
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.97 E-value=6.1e-29 Score=256.83 Aligned_cols=338 Identities=23% Similarity=0.290 Sum_probs=234.8
Q ss_pred eEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccch
Q 036427 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQS 225 (536)
Q Consensus 146 KIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~ 225 (536)
||+|.++++ |||.+++..|+++|.++ ||+|.++....... ....+ ....................+.
T Consensus 1 ~~~~~~~~~-gG~~~~~~~la~~l~~~---G~ev~v~~~~~~~~---~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 67 (350)
T cd03785 1 RILIAGGGT-GGHIFPALALAEELRER---GAEVLFLGTKRGLE---ARLVP------KAGIPLHTIPVGGLRRKGSLKK 67 (350)
T ss_pred CEEEEecCc-hhhhhHHHHHHHHHHhC---CCEEEEEECCCcch---hhccc------ccCCceEEEEecCcCCCChHHH
Confidence 688999999 69999999999999999 88887765422100 00000 0000111111100000000000
Q ss_pred hh-hhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC-cccccccccCCEEEEcCH
Q 036427 226 NF-AATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST-CHPTWFHKLVTRCYCPTA 303 (536)
Q Consensus 226 ~~-~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-~~~~~~~~~~d~vi~~S~ 303 (536)
.. .........++.+++++.+||+||++++.........++..+ +|++.+.++... ...+++.+.+|.++++++
T Consensus 68 ~~~~~~~~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~~~----~p~v~~~~~~~~~~~~~~~~~~~~~vi~~s~ 143 (350)
T cd03785 68 LKAPFKLLKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLG----IPLVIHEQNAVPGLANRLLARFADRVALSFP 143 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCcchHHHHHHHHhC----CCEEEEcCCCCccHHHHHHHHhhCEEEEcch
Confidence 00 111133445778889999999999987654322233334333 787755444221 223556777899999999
Q ss_pred HHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCC
Q 036427 304 DVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGE 383 (536)
Q Consensus 304 ~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~ 383 (536)
...+. .++.++.++||+++...+.+. .. +++++++++.++++++||..+.++..+++..+.+.+. .
T Consensus 144 ~~~~~-----~~~~~~~~i~n~v~~~~~~~~---~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~-----~ 209 (350)
T cd03785 144 ETAKY-----FPKDKAVVTGNPVREEILALD---RE-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELL-----R 209 (350)
T ss_pred hhhhc-----CCCCcEEEECCCCchHHhhhh---hh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh-----c
Confidence 88765 467889999999988765432 12 6778888888888888887776655555544444443 2
Q ss_pred CCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCC---cc
Q 036427 384 PIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA---GQ 458 (536)
Q Consensus 384 ~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~---~~ 458 (536)
++..+++++|.+. ++.+.+++. ..+|++.|+++++.++|+.||++|+++|++|++|||++|+|+|+++..+ +.
T Consensus 210 ~~~~~~~i~G~g~~~~l~~~~~~~--~~~v~~~g~~~~~~~~l~~ad~~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~ 287 (350)
T cd03785 210 KRLQVIHQTGKGDLEEVKKAYEEL--GVNYEVFPFIDDMAAAYAAADLVISRAGASTVAELAALGLPAILIPLPYAADDH 287 (350)
T ss_pred cCeEEEEEcCCccHHHHHHHHhcc--CCCeEEeehhhhHHHHHHhcCEEEECCCHhHHHHHHHhCCCEEEeecCCCCCCc
Confidence 4556666778874 333444443 4689999999999999999999999999999999999999999998653 34
Q ss_pred ccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHH
Q 036427 459 EAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQ 517 (536)
Q Consensus 459 e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~ 517 (536)
+..+++.+.+.|+|.+++ |+++++++|..+++ +++.+++|+++++++++.++.++|++
T Consensus 288 ~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~i~~ 349 (350)
T cd03785 288 QTANARALVKAGAAVLIPQEELTPERLAAALLELLS-DPERLKAMAEAARSLARPDAAERIAD 349 (350)
T ss_pred HHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHHHHh
Confidence 445678899999998875 79999999999999 99999999999999999999999876
No 7
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.97 E-value=1.7e-28 Score=253.27 Aligned_cols=340 Identities=16% Similarity=0.202 Sum_probs=237.9
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcc-cc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPR-VI 222 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~-~~ 222 (536)
|+||+|.++|| |||..++++++++|+++ +++|.++........ ..++. + .-+............ .+
T Consensus 1 ~~~i~~~~GGT-GGHi~Pala~a~~l~~~---g~~v~~vg~~~~~e~---~l~~~-~-----g~~~~~~~~~~l~~~~~~ 67 (352)
T PRK12446 1 MKKIVFTGGGS-AGHVTPNLAIIPYLKED---NWDISYIGSHQGIEK---TIIEK-E-----NIPYYSISSGKLRRYFDL 67 (352)
T ss_pred CCeEEEEcCCc-HHHHHHHHHHHHHHHhC---CCEEEEEECCCcccc---ccCcc-c-----CCcEEEEeccCcCCCchH
Confidence 46899999999 89999999999999987 889966642221100 00110 0 000000000000000 00
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCC-CcccccccccCCEEEEc
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLS-TCHPTWFHKLVTRCYCP 301 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~-~~~~~~~~~~~d~vi~~ 301 (536)
..............+..+++++++||+||+++.+.+..+..+++..+ +|++.+..+.. ....+.+.++++.+++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~----~p~~i~e~n~~~g~~nr~~~~~a~~v~~~ 143 (352)
T PRK12446 68 KNIKDPFLVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNR----VPVLLHESDMTPGLANKIALRFASKIFVT 143 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcC----CCEEEECCCCCccHHHHHHHHhhCEEEEE
Confidence 01111112233345667889999999999999887655555566555 88755444321 12235678899999988
Q ss_pred CHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhccc
Q 036427 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENL 381 (536)
Q Consensus 302 S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~ 381 (536)
.++..+ +++++++.++|+|+++++.... ++..++.+++++++++++++||+.|.+.+.+.+..+...+.
T Consensus 144 f~~~~~-----~~~~~k~~~tG~Pvr~~~~~~~--~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---- 212 (352)
T PRK12446 144 FEEAAK-----HLPKEKVIYTGSPVREEVLKGN--REKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL---- 212 (352)
T ss_pred ccchhh-----hCCCCCeEEECCcCCccccccc--chHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc----
Confidence 766443 3456789999999999875432 44566788998899999999999999888887777665542
Q ss_pred CCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh-hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccC----C
Q 036427 382 GEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV-SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFI----A 456 (536)
Q Consensus 382 ~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v-~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~----~ 456 (536)
.++++++++|... +.+..... .++...+|. ++|.++|+.||++|+.+|++|+.|++++|+|+|++|.. .
T Consensus 213 --~~~~vv~~~G~~~-~~~~~~~~---~~~~~~~f~~~~m~~~~~~adlvIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~ 286 (352)
T PRK12446 213 --LKYQIVHLCGKGN-LDDSLQNK---EGYRQFEYVHGELPDILAITDFVISRAGSNAIFEFLTLQKPMLLIPLSKFASR 286 (352)
T ss_pred --cCcEEEEEeCCch-HHHHHhhc---CCcEEecchhhhHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEEcCCCCCCC
Confidence 2377888999875 33323222 245667888 68999999999999999999999999999999999874 2
Q ss_pred ccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 457 GQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 457 ~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
++|..|++.+.+.|.+..+. +++.|.+++.++++ |++.++ +++.++...++.+++++.+.+
T Consensus 287 ~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~-~~~~~~---~~~~~~~~~~aa~~i~~~i~~ 351 (352)
T PRK12446 287 GDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSH-NNEKYK---TALKKYNGKEAIQTIIDHISE 351 (352)
T ss_pred chHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHc-CHHHHH---HHHHHcCCCCHHHHHHHHHHh
Confidence 46777999999999998764 68999999999998 876653 566777888899988887754
No 8
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.97 E-value=3.1e-27 Score=245.29 Aligned_cols=350 Identities=15% Similarity=0.125 Sum_probs=243.4
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||++++....||..+.+..|++.|.++ |++|.+++..... .... .. +................
T Consensus 1 mki~~~~~p~~gG~~~~~~~la~~L~~~---G~~v~v~~~~~~~---~~~~---------~~-~~~~~~~~~~~~~~~~~ 64 (371)
T cd04962 1 MKIGIVCYPTYGGSGVVATELGKALARR---GHEVHFITSSRPF---RLDE---------YS-PNIFFHEVEVPQYPLFQ 64 (371)
T ss_pred CceeEEEEeCCCCccchHHHHHHHHHhc---CCceEEEecCCCc---chhh---------hc-cCeEEEEecccccchhh
Confidence 7999998665589999999999999999 7788776542210 0000 00 00000000000000000
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc----------cccccccc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC----------HPTWFHKL 294 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~----------~~~~~~~~ 294 (536)
. ..........+.+++++.+||+||++.+.....+..++++.....++|++...|+.... ..++..+.
T Consensus 65 ~--~~~~~~~~~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~ 142 (371)
T cd04962 65 Y--PPYDLALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDITLVGQDPSFQPATRFSIEK 142 (371)
T ss_pred c--chhHHHHHHHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccccccccccchHHHHHHHhh
Confidence 0 00122334677888999999999998755433333333332211247887666532210 11344578
Q ss_pred CCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHH
Q 036427 295 VTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGN 374 (536)
Q Consensus 295 ~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~ 374 (536)
+|.+++.|+...+.+.+.+..+.++.+++|+++...+.+. .....++++++.++.++++++|+....|++..+++++..
T Consensus 143 ~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~-~~~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~a~~~ 221 (371)
T cd04962 143 SDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPK-PDEALKRRLGAPEGEKVLIHISNFRPVKRIDDVIRIFAK 221 (371)
T ss_pred CCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCC-chHHHHHhcCCCCCCeEEEEecccccccCHHHHHHHHHH
Confidence 9999999999999887765556789999999987655443 234566778888888888889988888888888877755
Q ss_pred HhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhCC
Q 036427 375 ALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRGL 447 (536)
Q Consensus 375 ~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~Gl 447 (536)
... ..+.++ +++|.++ .+.+..++.+..++|++.|+.+++.++|+.||++|+|| | |++++|||++|+
T Consensus 222 l~~-----~~~~~l-~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~ 295 (371)
T cd04962 222 VRK-----EVPARL-LLVGDGPERSPAERLARELGLQDDVLFLGKQDHVEELLSIADLFLLPSEKESFGLAALEAMACGV 295 (371)
T ss_pred HHh-----cCCceE-EEEcCCcCHHHHHHHHHHcCCCceEEEecCcccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCC
Confidence 432 234554 5556664 34555666677788999999999999999999999998 3 899999999999
Q ss_pred cEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHh-cCCchHHHHHHHHHHHHh
Q 036427 448 PIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKL-ARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 448 PVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~-a~~~~~~~i~~~i~~l~~ 524 (536)
|||+++.++..+ .+.+...|.+++ |+++++++|..+++ +++.+++|++++++. .+.++++.+++.+.++++
T Consensus 296 PvI~s~~~~~~e-----~i~~~~~G~~~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 296 PVVASNAGGIPE-----VVKHGETGFLVDVGDVEAMAEYALSLLE-DDELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred CEEEeCCCCchh-----hhcCCCceEEcCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999998765433 234445677765 89999999999999 999999999999998 567999999999998876
Q ss_pred h
Q 036427 525 Q 525 (536)
Q Consensus 525 ~ 525 (536)
+
T Consensus 370 ~ 370 (371)
T cd04962 370 R 370 (371)
T ss_pred h
Confidence 4
No 9
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.96 E-value=2.7e-27 Score=254.29 Aligned_cols=339 Identities=14% Similarity=0.196 Sum_probs=226.8
Q ss_pred CCCceEEEEeCC----CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCC
Q 036427 142 DQPKKVLILMSD----TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGT 217 (536)
Q Consensus 142 ~~~mKIL~~~~~----~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~ 217 (536)
.++|||++++.. .-||...+...|++.|.++ ||+|.++...... +..+.++.. ... ..+...++.
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~---G~eV~vlt~~~~~-~~~~~g~~v-----~~~-~~~~~~~~~- 124 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREM---GDEVLVVTTDEGV-PQEFHGAKV-----IGS-WSFPCPFYQ- 124 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHC---CCeEEEEecCCCC-CccccCcee-----ecc-CCcCCccCC-
Confidence 677999998642 1267788999999999998 7888776542211 100111100 000 000000000
Q ss_pred CcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchH-HHHHHHHcCCCCCceEEEEecCCCC-cc--------
Q 036427 218 APRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHV-PLRILRAKGLLKKIVFTTVITDLST-CH-------- 287 (536)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i-~~~~~~~~g~~~~ip~v~~~~d~~~-~~-------- 287 (536)
... .......++.+++++.+||+||++.+..... .+.+++..+ +|++...|+... ..
T Consensus 125 --~~~-------~~~~~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~----ip~V~~~h~~~~~~~~~~~~~~~ 191 (465)
T PLN02871 125 --KVP-------LSLALSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLC----VPLVMSYHTHVPVYIPRYTFSWL 191 (465)
T ss_pred --Cce-------eeccCCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhC----CCEEEEEecCchhhhhcccchhh
Confidence 000 0111112567788999999999987654322 233344444 788754443211 00
Q ss_pred -------cccccccCCEEEEcCHHHHHHHHHhCC-CCCCEEEeCCCCCCCCCCCCCchHHHHHHcC-CCCCCCEEEEecC
Q 036427 288 -------PTWFHKLVTRCYCPTADVAKRAMKAGL-QASQIKVYGLPVRPSFVKPVRPKVELRRELG-MDEDLPAVLLMGG 358 (536)
Q Consensus 288 -------~~~~~~~~d~vi~~S~~~~~~l~~~g~-~~~ki~vignpv~~~~~~~~~~~~~~r~~lg-i~~~~~~il~~gg 358 (536)
.+++.+.+|.++++|+...+.+.+.+. +..++.+++|++|.+.+.+.......++.+. ..++.++|+++|+
T Consensus 192 ~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~i~~vGr 271 (465)
T PLN02871 192 VKPMWDIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSEEMRARLSGGEPEKPLIVYVGR 271 (465)
T ss_pred HHHHHHHHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccccHHHHHHhcCCCCCCeEEEEeCC
Confidence 134567899999999999999988764 4678999999999887765444455565553 3345677777766
Q ss_pred CCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC--
Q 036427 359 GEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA-- 434 (536)
Q Consensus 359 ~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s-- 434 (536)
....|+...+++++. . .+++++ +++|+++ ..+.++++....+|+|+|++ +++.++|+.||++|+||
T Consensus 272 l~~~K~~~~li~a~~-~-------~~~~~l-~ivG~G~-~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~ 341 (465)
T PLN02871 272 LGAEKNLDFLKRVME-R-------LPGARL-AFVGDGP-YREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVMPSES 341 (465)
T ss_pred CchhhhHHHHHHHHH-h-------CCCcEE-EEEeCCh-HHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCEEEECCcc
Confidence 554455444433332 1 245665 5667776 23344443234579999998 68999999999999998
Q ss_pred -C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhh----CCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHh
Q 036427 435 -G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE----NGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKL 506 (536)
Q Consensus 435 -G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~----~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~ 506 (536)
+ |++++|||+||+|||+++.++..+ +++ .+.|.+++ |+++++++|.++++ +++.+++|++++++.
T Consensus 342 E~~g~~vlEAmA~G~PVI~s~~gg~~e------iv~~~~~~~~G~lv~~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~ 414 (465)
T PLN02871 342 ETLGFVVLEAMASGVPVVAARAGGIPD------IIPPDQEGKTGFLYTPGDVDDCVEKLETLLA-DPELRERMGAAAREE 414 (465)
T ss_pred cccCcHHHHHHHcCCCEEEcCCCCcHh------hhhcCCCCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHH
Confidence 3 899999999999999998654333 444 45677764 89999999999999 999999999999999
Q ss_pred cCCchHHHHHHHHHH
Q 036427 507 ARPDAVFRIVQDLHE 521 (536)
Q Consensus 507 a~~~~~~~i~~~i~~ 521 (536)
+..+.|+.+++++.+
T Consensus 415 ~~~fsw~~~a~~l~~ 429 (465)
T PLN02871 415 VEKWDWRAATRKLRN 429 (465)
T ss_pred HHhCCHHHHHHHHHH
Confidence 888999999998876
No 10
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.96 E-value=1.1e-27 Score=247.13 Aligned_cols=338 Identities=20% Similarity=0.239 Sum_probs=223.8
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||+|++++. +||...+..|+++|.++ ||+|.++...... .... .. .+ ..+................
T Consensus 1 ~~i~~~~g~~-~g~~~~~~~La~~L~~~---g~eV~vv~~~~~~-~~~~--~~-~~-----g~~~~~i~~~~~~~~~~~~ 67 (348)
T TIGR01133 1 KKVVLAAGGT-GGHIFPALAVAEELIKR---GVEVLWLGTKRGL-EKRL--VP-KA-----GIEFYFIPVGGLRRKGSFR 67 (348)
T ss_pred CeEEEEeCcc-HHHHhHHHHHHHHHHhC---CCEEEEEeCCCcc-hhcc--cc-cC-----CCceEEEeccCcCCCChHH
Confidence 6999999999 69999888999999998 7888776431110 0000 00 00 0000010000000000000
Q ss_pred hh-hhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCC-CcccccccccCCEEEEcC
Q 036427 225 SN-FAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLS-TCHPTWFHKLVTRCYCPT 302 (536)
Q Consensus 225 ~~-~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~-~~~~~~~~~~~d~vi~~S 302 (536)
.+ ..........++.+++++++||+||++.+........+.+..+ +|++.+.++.. ....+|+.+.+|.+++.+
T Consensus 68 ~l~~~~~~~~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~~----~p~v~~~~~~~~~~~~~~~~~~~d~ii~~~ 143 (348)
T TIGR01133 68 LIKTPLKLLKAVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKLLG----IPLFHHEQNAVPGLTNKLLSRFAKKVLISF 143 (348)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHHcC----CCEEEECCCCCccHHHHHHHHHhCeeEECc
Confidence 00 0111233445788899999999999987654332222334333 67764333322 123468889999999999
Q ss_pred HHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccC
Q 036427 303 ADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLG 382 (536)
Q Consensus 303 ~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~ 382 (536)
+...+.+ +..++|||++..++.+.. .+++++++++.++++++||+.+.+...+.+..+.+.+.
T Consensus 144 ~~~~~~~--------~~~~i~n~v~~~~~~~~~----~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~----- 206 (348)
T TIGR01133 144 PGAKDHF--------EAVLVGNPVRQEIRSLPV----PRERFGLREGKPTILVLGGSQGAKILNELVPKALAKLA----- 206 (348)
T ss_pred hhHhhcC--------CceEEcCCcCHHHhcccc----hhhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHh-----
Confidence 9887653 247899999876554321 13457788788888899988776554554433334443
Q ss_pred CCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCC--cc
Q 036427 383 EPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA--GQ 458 (536)
Q Consensus 383 ~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~--~~ 458 (536)
+.+.++++++|.++ ++.+.+++.++...+.+. +. ++.++|+.||++|+++|+++++|||++|+|+|+++..+ ++
T Consensus 207 ~~~~~~~~~~g~~~~~~l~~~~~~~~l~~~v~~~-~~-~~~~~l~~ad~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~ 284 (348)
T TIGR01133 207 EKGIQIVHQTGKNDLEKVKNVYQELGIEAIVTFI-DE-NMAAAYAAADLVISRAGASTVAELAAAGVPAILIPYPYAADD 284 (348)
T ss_pred hcCcEEEEECCcchHHHHHHHHhhCCceEEecCc-cc-CHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEeeCCCCccc
Confidence 23456666777764 334444444443334444 22 89999999999999999999999999999999998754 23
Q ss_pred ccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 036427 459 EAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDL 519 (536)
Q Consensus 459 e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i 519 (536)
+..+++.+.+.+.|.+++ ++++|+++|+++++ |++.+++|+++++++..++..+++++.|
T Consensus 285 ~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 348 (348)
T TIGR01133 285 QYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLL-DPANLEAMAEAARKLAKPDAAKRIAELI 348 (348)
T ss_pred hhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHc-CHHHHHHHHHHHHhcCCccHHHHHHhhC
Confidence 444667788888888874 39999999999999 9999999999999999999999998753
No 11
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.96 E-value=9.9e-26 Score=235.09 Aligned_cols=344 Identities=14% Similarity=0.127 Sum_probs=233.8
Q ss_pred ceEEEEeCCC-CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhcc-ccceeecCCCcccc
Q 036427 145 KKVLILMSDT-GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGP-LWKMTYYGTAPRVI 222 (536)
Q Consensus 145 mKIL~~~~~~-GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~-l~~~~~~~~~~~~~ 222 (536)
.||+++..++ .||.++.+..|++.|.++ ++++.++...... .+... ..+.+. .... ... ..
T Consensus 2 ~~il~ii~~~~~GG~e~~~~~l~~~l~~~---~~~~~v~~~~~~~------~~~~~---~~~~~i~~~~~----~~~-~~ 64 (374)
T TIGR03088 2 PLIVHVVYRFDVGGLENGLVNLINHLPAD---RYRHAVVALTEVS------AFRKR---IQRPDVAFYAL----HKQ-PG 64 (374)
T ss_pred ceEEEEeCCCCCCcHHHHHHHHHhhcccc---ccceEEEEcCCCC------hhHHH---HHhcCceEEEe----CCC-CC
Confidence 5899888664 389999999999999887 6666555432211 11111 111111 1110 000 00
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEE-EEec--CCCCcc---------ccc
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFT-TVIT--DLSTCH---------PTW 290 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v-~~~~--d~~~~~---------~~~ 290 (536)
.......++.+++++.+||+||++..... .....++..+ +|.. ...+ +....+ .++
T Consensus 65 -------~~~~~~~~l~~~l~~~~~Divh~~~~~~~-~~~~~~~~~~----~~~~i~~~h~~~~~~~~~~~~~~~~~~~~ 132 (374)
T TIGR03088 65 -------KDVAVYPQLYRLLRQLRPDIVHTRNLAAL-EAQLPAALAG----VPARIHGEHGRDVFDLDGSNWKYRWLRRL 132 (374)
T ss_pred -------CChHHHHHHHHHHHHhCCCEEEEcchhHH-HHHHHHHhcC----CCeEEEeecCcccccchhhHHHHHHHHHH
Confidence 11223457888899999999999865322 1223334444 4432 1111 111111 122
Q ss_pred ccccCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCC-chHHHHHHcCCCCCCCEEEEecCCCCCCcHHHH
Q 036427 291 FHKLVTRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVR-PKVELRRELGMDEDLPAVLLMGGGEGMGPIEAT 368 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~-~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~ 368 (536)
..+.+|.++++|+...+.+.+ .++++.++.+++|+++.+.+.+.. .....++.....++.++++++|+....|+...+
T Consensus 133 ~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~l 212 (374)
T TIGR03088 133 YRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADESVVVGTVGRLQAVKDQPTL 212 (374)
T ss_pred HHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHhhcCCCCCeEEEEEecCCcccCHHHH
Confidence 345789999999999998876 477888999999999987765432 222233334445666788888888777888888
Q ss_pred HHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHH
Q 036427 369 ARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAE 441 (536)
Q Consensus 369 l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllE 441 (536)
++++.+...+.....+++++ +++|.++ ++.+.+++.++..++.|.|+.+++.++|+.||++|+|| | |.+++|
T Consensus 213 i~a~~~l~~~~~~~~~~~~l-~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~pS~~Eg~~~~~lE 291 (374)
T TIGR03088 213 VRAFALLVRQLPEGAERLRL-VIVGDGPARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSLAEGISNTILE 291 (374)
T ss_pred HHHHHHHHHhCcccccceEE-EEecCCchHHHHHHHHHHcCCcceEEEcCCcCCHHHHHHhcCEEEeccccccCchHHHH
Confidence 87776554321111235554 5557664 44556667778888999999999999999999999998 4 899999
Q ss_pred HHHhCCcEEEeccCCccccCChhhHhhC-CceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHH
Q 036427 442 AMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQ 517 (536)
Q Consensus 442 Ama~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~ 517 (536)
||+||+|||+++.++..| ++++ ..|.+++ |+++++++|..+++ +++.+.+|+++|++.+ ..++++.+++
T Consensus 292 Ama~G~Pvv~s~~~g~~e------~i~~~~~g~~~~~~d~~~la~~i~~l~~-~~~~~~~~~~~a~~~~~~~fs~~~~~~ 364 (374)
T TIGR03088 292 AMASGLPVIATAVGGNPE------LVQHGVTGALVPPGDAVALARALQPYVS-DPAARRAHGAAGRARAEQQFSINAMVA 364 (374)
T ss_pred HHHcCCCEEEcCCCCcHH------HhcCCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 999999999999765444 4444 4566664 89999999999999 9999999999999987 5799999999
Q ss_pred HHHHHHhh
Q 036427 518 DLHELVRQ 525 (536)
Q Consensus 518 ~i~~l~~~ 525 (536)
.+.+++++
T Consensus 365 ~~~~~y~~ 372 (374)
T TIGR03088 365 AYAGLYDQ 372 (374)
T ss_pred HHHHHHHH
Confidence 99998764
No 12
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.95 E-value=3.8e-25 Score=234.02 Aligned_cols=358 Identities=15% Similarity=0.187 Sum_probs=233.4
Q ss_pred ceEEEEeC----CCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCc--chhHHHH-HHhhccccceeecCC
Q 036427 145 KKVLILMS----DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQ--LPRSYNF-LVKHGPLWKMTYYGT 217 (536)
Q Consensus 145 mKIL~~~~----~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~--~~~~y~~-~~~~~~l~~~~~~~~ 217 (536)
|||++++. .. ||...+...|+++|.++ ||+|.|++....-..+.... ....|.. ....-+.++......
T Consensus 1 mkIlii~~~~~P~~-~g~~~~~~~l~~~L~~~---G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~ 76 (412)
T PRK10307 1 MKILVYGINYAPEL-TGIGKYTGEMAEWLAAR---GHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVP 76 (412)
T ss_pred CeEEEEecCCCCCc-cchhhhHHHHHHHHHHC---CCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCC
Confidence 79999973 34 67778899999999998 78887765421111110000 0000000 000111111111000
Q ss_pred -CcccccchhhhhhhHHHHHHHHHHHH--hhCCCEEEEcCcccchH--HHHHHHHcCCCCCceEEEEecCCCC-------
Q 036427 218 -APRVIHQSNFAATSTFIAREVAKGLM--KYQPDIIISVHPLMQHV--PLRILRAKGLLKKIVFTTVITDLST------- 285 (536)
Q Consensus 218 -~~~~~~~~~~~~~~~~~~~~l~~~l~--~~kPDvVi~~~~~~~~i--~~~~~~~~g~~~~ip~v~~~~d~~~------- 285 (536)
......+ ... ...+....+..+++ +.+||+||++.+..... .+.+++..+ +|++...+|+..
T Consensus 77 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~----~~~v~~~~d~~~~~~~~~~ 150 (412)
T PRK10307 77 KQPSGLKR-LLH-LGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSG----ARTWLHIQDYEVDAAFGLG 150 (412)
T ss_pred CCccHHHH-HHH-HHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhC----CCEEEEeccCCHHHHHHhC
Confidence 0000000 000 00111112222222 27899999987654322 223344444 787776666531
Q ss_pred -c-----------ccccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCc--hHHHHHHcCCCCCCC
Q 036427 286 -C-----------HPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRP--KVELRRELGMDEDLP 351 (536)
Q Consensus 286 -~-----------~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~--~~~~r~~lgi~~~~~ 351 (536)
. ..++..+.+|.++++|+..++.+.+.+.++.++.+++|+++.+.+.+... ...+++.++++++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (412)
T PRK10307 151 LLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAREKGVAAEKVIFFPNWSEVARFQPVADADVDALRAQLGLPDGKK 230 (412)
T ss_pred CccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHHcCCCcccEEEECCCcCHhhcCCCCccchHHHHHHcCCCCCCE
Confidence 0 01234667999999999999999888888889999999999876654322 345788899988777
Q ss_pred EEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhh
Q 036427 352 AVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGA 426 (536)
Q Consensus 352 ~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~ 426 (536)
+++++|+....++...+++++.. +. ..+++++ +++|.++ ++++.+++.++. +|+|+|++ +++.++|+.
T Consensus 231 ~i~~~G~l~~~kg~~~li~a~~~-l~----~~~~~~l-~ivG~g~~~~~l~~~~~~~~l~-~v~f~G~~~~~~~~~~~~~ 303 (412)
T PRK10307 231 IVLYSGNIGEKQGLELVIDAARR-LR----DRPDLIF-VICGQGGGKARLEKMAQCRGLP-NVHFLPLQPYDRLPALLKM 303 (412)
T ss_pred EEEEcCccccccCHHHHHHHHHH-hc----cCCCeEE-EEECCChhHHHHHHHHHHcCCC-ceEEeCCCCHHHHHHHHHh
Confidence 88887776666777777777653 32 2456665 5567775 344455556665 79999997 489999999
Q ss_pred cCeEEECC---C-----hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHH
Q 036427 427 CDCIITKA---G-----PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDEL 496 (536)
Q Consensus 427 aDv~V~~s---G-----~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~ 496 (536)
||++|+|+ + |.+++|||+||+|||+++.++.. ...+++ +.|.+++ |+++++++|.++++ +++.+
T Consensus 304 aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~----~~~~i~-~~G~~~~~~d~~~la~~i~~l~~-~~~~~ 377 (412)
T PRK10307 304 ADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE----LGQLVE-GIGVCVEPESVEALVAAIAALAR-QALLR 377 (412)
T ss_pred cCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch----HHHHHh-CCcEEeCCCCHHHHHHHHHHHHh-CHHHH
Confidence 99999986 1 56789999999999999865421 123555 6777774 89999999999999 99999
Q ss_pred HHHHHHHHHhcC-CchHHHHHHHHHHHHhh
Q 036427 497 KAMSQNALKLAR-PDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 497 ~~m~~~a~~~a~-~~~~~~i~~~i~~l~~~ 525 (536)
++|+++|++.+. .++++.+++.+.+++++
T Consensus 378 ~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 378 PKLGTVAREYAERTLDKENVLRQFIADIRG 407 (412)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 999999999876 58999999988887764
No 13
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.95 E-value=1.9e-25 Score=235.50 Aligned_cols=344 Identities=14% Similarity=0.082 Sum_probs=231.0
Q ss_pred chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccchhhhhhhHHHH
Q 036427 156 GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIA 235 (536)
Q Consensus 156 gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (536)
||.+.++..|+++|.++ |++|.|.+.............. ............ ...............+..
T Consensus 20 GG~e~~v~~la~~L~~~---G~~V~v~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~ 88 (405)
T TIGR03449 20 GGMNVYILETATELARR---GIEVDIFTRATRPSQPPVVEVA-------PGVRVRNVVAGP-YEGLDKEDLPTQLCAFTG 88 (405)
T ss_pred CCceehHHHHHHHHhhC---CCEEEEEecccCCCCCCccccC-------CCcEEEEecCCC-cccCCHHHHHHHHHHHHH
Confidence 89999999999999998 7888777543211100000000 000000000000 000000000000011111
Q ss_pred HHHHHHHHh--hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc----------c----c----ccccccC
Q 036427 236 REVAKGLMK--YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC----------H----P----TWFHKLV 295 (536)
Q Consensus 236 ~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~----------~----~----~~~~~~~ 295 (536)
..+..++++ .+||+||++........+.+.+.. ++|++...|+.... . . +++.+.+
T Consensus 89 ~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~----~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 164 (405)
T TIGR03449 89 GVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRW----GVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNA 164 (405)
T ss_pred HHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhc----CCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhc
Confidence 223344443 479999998743322223333333 37888766654210 0 0 1245688
Q ss_pred CEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHH
Q 036427 296 TRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGN 374 (536)
Q Consensus 296 d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~ 374 (536)
|.+++.|+...+.+.+ ++.+..++.+++|+++.+.+.+. ++...+.+++++++.++++++|+....|+...+++++.+
T Consensus 165 d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~-~~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~li~a~~~ 243 (405)
T TIGR03449 165 DRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPG-DRATERARLGLPLDTKVVAFVGRIQPLKAPDVLLRAVAE 243 (405)
T ss_pred CeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCC-cHHHHHHhcCCCCCCcEEEEecCCCcccCHHHHHHHHHH
Confidence 9999999998888765 57777899999999998776544 355677888988888889899888777888878877766
Q ss_pred HhhhcccCCCC--cEEEEEec---CC-H---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHH
Q 036427 375 ALYDENLGEPI--GQVLVICG---RN-K---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTI 439 (536)
Q Consensus 375 ~l~~~~~~~~~--~~~lvi~G---~~-~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tl 439 (536)
... ..++ +++++++| .+ + ++.+..++.++.++|+|+|++ +++.++|+.||++|+|+ | |+++
T Consensus 244 l~~----~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~ 319 (405)
T TIGR03449 244 LLD----RDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVA 319 (405)
T ss_pred HHh----hCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHH
Confidence 543 2344 65555543 13 2 345556667788899999997 58999999999999997 3 8999
Q ss_pred HHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHH
Q 036427 440 AEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQ 517 (536)
Q Consensus 440 lEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~ 517 (536)
+|||++|+|||+++.++..+. +.+...|++++ |+++++++|.++++ +++.+++|++++++.++.++|+++++
T Consensus 320 lEAma~G~Pvi~~~~~~~~e~-----i~~~~~g~~~~~~d~~~la~~i~~~l~-~~~~~~~~~~~~~~~~~~fsw~~~~~ 393 (405)
T TIGR03449 320 MEAQACGTPVVAARVGGLPVA-----VADGETGLLVDGHDPADWADALARLLD-DPRTRIRMGAAAVEHAAGFSWAATAD 393 (405)
T ss_pred HHHHHcCCCEEEecCCCcHhh-----hccCCceEECCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 999999999999997554432 44445677775 89999999999999 99999999999999888899999999
Q ss_pred HHHHHHhh
Q 036427 518 DLHELVRQ 525 (536)
Q Consensus 518 ~i~~l~~~ 525 (536)
++.+++.+
T Consensus 394 ~~~~~y~~ 401 (405)
T TIGR03449 394 GLLSSYRD 401 (405)
T ss_pred HHHHHHHH
Confidence 99998865
No 14
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.95 E-value=5.5e-25 Score=226.78 Aligned_cols=343 Identities=17% Similarity=0.169 Sum_probs=231.5
Q ss_pred eEEEEeCCCC-chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 146 KVLILMSDTG-GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 146 KIL~~~~~~G-gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||+++++.+ ||+.+.+..|++.|.+. |++|.+.+....... ..... .... ...... ..
T Consensus 1 ~il~~~~~~~~gG~~~~~~~l~~~L~~~---g~~v~v~~~~~~~~~----~~~~~---~~~~---~~~~~~----~~--- 60 (360)
T cd04951 1 KILYVITGLGLGGAEKQVVDLADQFVAK---GHQVAIISLTGESEV----KPPID---ATII---LNLNMS----KN--- 60 (360)
T ss_pred CeEEEecCCCCCCHHHHHHHHHHhcccC---CceEEEEEEeCCCCc----cchhh---ccce---EEeccc----cc---
Confidence 5888887654 89999999999999988 778877654222110 00000 0000 000000 00
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc--cc----ccccccCCEE
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC--HP----TWFHKLVTRC 298 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~--~~----~~~~~~~d~v 298 (536)
.. ........+.+++++++||+||++.+....+ ..+.+.. ...+|++...++.... .. ++..+.++.+
T Consensus 61 -~~--~~~~~~~~~~~~~~~~~pdiv~~~~~~~~~~-~~l~~~~--~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ 134 (360)
T cd04951 61 -PL--SFLLALWKLRKILRQFKPDVVHAHMFHANIF-ARLLRLF--LPSPPLICTAHSKNEGGRLRMLAYRLTDFLSDLT 134 (360)
T ss_pred -ch--hhHHHHHHHHHHHHhcCCCEEEEcccchHHH-HHHHHhh--CCCCcEEEEeeccCchhHHHHHHHHHHhhccCce
Confidence 00 1112234667788999999999987543322 2222322 2236766555544211 11 2234556778
Q ss_pred EEcCHHHHHHHHHhC-CCCCCEEEeCCCCCCCCCCCC-CchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHh
Q 036427 299 YCPTADVAKRAMKAG-LQASQIKVYGLPVRPSFVKPV-RPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNAL 376 (536)
Q Consensus 299 i~~S~~~~~~l~~~g-~~~~ki~vignpv~~~~~~~~-~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l 376 (536)
+++++...+.+.+.+ +++.++.+++|+++...+.+. .....+++.++++++.++++++|+....++...+++++.+..
T Consensus 135 ~~~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~ 214 (360)
T cd04951 135 TNVSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLL 214 (360)
T ss_pred EEEcHHHHHHHHhccCCCcccEEEEccccchhhcCcchHHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHH
Confidence 888999999888765 677899999999987665433 224457778888888888888988877788888887776544
Q ss_pred hhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcE
Q 036427 377 YDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPI 449 (536)
Q Consensus 377 ~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPV 449 (536)
. ..++++++ ++|.++ ++.+.+++.+...+|.++|+.+++.++|+.||++++|| | |++++|||++|+||
T Consensus 215 ~----~~~~~~l~-i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~Pv 289 (360)
T cd04951 215 S----DYLDIKLL-IAGDGPLRATLERLIKALGLSNRVKLLGLRDDIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPV 289 (360)
T ss_pred h----hCCCeEEE-EEcCCCcHHHHHHHHHhcCCCCcEEEecccccHHHHHHhhceEEecccccCCChHHHHHHHcCCCE
Confidence 3 23567654 456654 34555666677789999999999999999999999998 3 89999999999999
Q ss_pred EEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 450 ILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 450 I~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
|+++.++..+. +.+.|......|+++++++|.++++.+++.++.++.+.....+.++++.+++.+.++++
T Consensus 290 I~~~~~~~~e~-----i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 290 VATDAGGVREV-----VGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred EEecCCChhhE-----ecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 99986554442 33333333335999999999999953677778887774445677999999999998875
No 15
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.94 E-value=1.9e-24 Score=230.56 Aligned_cols=343 Identities=15% Similarity=0.128 Sum_probs=220.2
Q ss_pred chHHHHHHHHHHHHHhccCCce--EEEEeeccccc----CCCCCCcchhHHHHHHhhccccceeecCCCcccccchhhhh
Q 036427 156 GGHRASAEAIKAAFHEKFGNEY--QVFVTDLWSDH----TPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAA 229 (536)
Q Consensus 156 gGh~~~~l~La~~L~~~~g~g~--eV~v~~~~~~~----~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 229 (536)
||...++..|+++|.++ |+ +|.|++..... ..+... ... .....++.+..... . ..........
T Consensus 26 GG~~~~v~~La~~L~~~---G~~~~V~v~t~~~~~~~~~~~~~~~-~~~----~~~gv~v~r~~~~~-~-~~~~~~~~~~ 95 (439)
T TIGR02472 26 GGQTKYVLELARALARR---SEVEQVDLVTRLIKDAKVSPDYAQP-IER----IAPGARIVRLPFGP-R-RYLRKELLWP 95 (439)
T ss_pred CCcchHHHHHHHHHHhC---CCCcEEEEEeccccCcCCCCccCCC-eeE----eCCCcEEEEecCCC-C-CCcChhhhhh
Confidence 79999999999999998 54 78776542211 011000 000 00111111111100 0 0000000011
Q ss_pred hhHHHHHHHHHHHHhh--CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc--------------------
Q 036427 230 TSTFIAREVAKGLMKY--QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH-------------------- 287 (536)
Q Consensus 230 ~~~~~~~~l~~~l~~~--kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~-------------------- 287 (536)
....+...+.+++++. +||+||++......+...+++..+ +|++...|+.....
T Consensus 96 ~~~~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~~----~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (439)
T TIGR02472 96 YLDELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLLG----VPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNI 171 (439)
T ss_pred hHHHHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHhC----CCEEEecccccchhhhhcccCCCChhhhhhhcch
Confidence 1123445677777754 699999987543322333344444 78876665432100
Q ss_pred ------cccccccCCEEEEcCHHHHHH-HHHh-CCCCCCEEEeCCCCCCCCCCCCCch---HH---HHHHcCCCCCCCEE
Q 036427 288 ------PTWFHKLVTRCYCPTADVAKR-AMKA-GLQASQIKVYGLPVRPSFVKPVRPK---VE---LRRELGMDEDLPAV 353 (536)
Q Consensus 288 ------~~~~~~~~d~vi~~S~~~~~~-l~~~-g~~~~ki~vignpv~~~~~~~~~~~---~~---~r~~lgi~~~~~~i 353 (536)
.++..+.+|.++++++..... +..+ +++++++.+++|+++.+.+.+..+. .. .++.++..++.+++
T Consensus 172 ~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i 251 (439)
T TIGR02472 172 SRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPI 251 (439)
T ss_pred HHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCCcEE
Confidence 013456789999988765443 3333 6788899999999998876543211 11 22345566677888
Q ss_pred EEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHH--------------HHHHHHcCCCCCCEEEecCh--
Q 036427 354 LLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKK--------------LANKLLSTDWKIPVQVKGFV-- 417 (536)
Q Consensus 354 l~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~--------------l~~~l~~~~~~~~V~~~G~v-- 417 (536)
+++|+....|+...+++++..... . .....+++++|.+++ +.+.....++..+|+|.|++
T Consensus 252 ~~vGrl~~~Kg~~~li~A~~~l~~-~---~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~ 327 (439)
T TIGR02472 252 LAISRPDRRKNIPSLVEAYGRSPK-L---QEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRP 327 (439)
T ss_pred EEEcCCcccCCHHHHHHHHHhChh-h---hhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCH
Confidence 899988888888888888764211 0 112334445676531 11223455678899999975
Q ss_pred hhHHHHHhhc----CeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC--CHHHHHHHHH
Q 036427 418 SKMEEAMGAC----DCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK--SPKEIANMVS 486 (536)
Q Consensus 418 ~~l~~ll~~a----Dv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~--d~~~La~~I~ 486 (536)
+++.++|+.| |++|+|| | |++++|||+||+|||+++.++..| ++++ ..|.+++ |+++|+++|.
T Consensus 328 ~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~e------iv~~~~~G~lv~~~d~~~la~~i~ 401 (439)
T TIGR02472 328 DDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRD------IIANCRNGLLVDVLDLEAIASALE 401 (439)
T ss_pred HHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHH------HhcCCCcEEEeCCCCHHHHHHHHH
Confidence 5899999987 9999998 4 899999999999999999755443 5554 4566664 8999999999
Q ss_pred HHhCCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHH
Q 036427 487 QWFGPKIDELKAMSQNALKLA-RPDAVFRIVQDLHELV 523 (536)
Q Consensus 487 ~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~l~ 523 (536)
++++ +++.+++|++++++.+ +.++|+++++.+++++
T Consensus 402 ~ll~-~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 402 DALS-DSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999 9999999999999875 5689999999999876
No 16
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.94 E-value=3.1e-24 Score=226.40 Aligned_cols=357 Identities=15% Similarity=0.121 Sum_probs=231.5
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCC-----cc--hhHHHH------HHhhcc-cc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFN-----QL--PRSYNF------LVKHGP-LW 210 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~-----~~--~~~y~~------~~~~~~-l~ 210 (536)
|||.+++.....=.++-...=+.+|.++ |++|.+++.........-. .+ ...|.. +..... ..
T Consensus 1 m~ia~~~~~~P~~setFi~~ei~~l~~~---G~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (406)
T PRK15427 1 MKVGFFLLKFPLSSETFVLNQITAFIDM---GFEVEIVALQKGDTQNTHAAWTKYNLAAKTRWLQDEPQGKVAKLRHRAS 77 (406)
T ss_pred CeEEEEeccCCccchhhHHHHHHHHHHc---CceEEEEEccCCCccccccchhhhccccceeecCcCccchHHHHhhhhh
Confidence 7999999876656666677777889998 8889888654332111000 00 000100 000000 00
Q ss_pred -cee-ecCCC--cc-cccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec--CC
Q 036427 211 -KMT-YYGTA--PR-VIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT--DL 283 (536)
Q Consensus 211 -~~~-~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~--d~ 283 (536)
... +.... .. ...+..........+-.+.+.+++.+||+||+|....... ...++..+..+ .|.+++.| |.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diihaH~~~~~~~-~~~~~~~~~~~-~~~~~t~Hg~d~ 155 (406)
T PRK15427 78 QTLRGIHRKNTWKALNLKRYGAESRNLILSAICAQVATPFVADVFIAHFGPAGVT-AAKLRELGVLR-GKIATIFHGIDI 155 (406)
T ss_pred hHhhhhcccchhccCChhhhhhhhHHHHHHHHHhhhhccCCCCEEEEcCChHHHH-HHHHHHhCCCC-CCeEEEEccccc
Confidence 000 00000 00 0000000111122223445667788999999987643222 22233333322 23344433 33
Q ss_pred CCc--------ccccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEE
Q 036427 284 STC--------HPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLL 355 (536)
Q Consensus 284 ~~~--------~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~ 355 (536)
... ...+..+.+|.++++|+..++.+.+.|++++++.+++|+++.+.+.+.... ...+...+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~ad~vv~~S~~~~~~l~~~g~~~~ki~vi~nGvd~~~f~~~~~~--------~~~~~~~il~ 227 (406)
T PRK15427 156 SSREVLNHYTPEYQQLFRRGDLMLPISDLWAGRLQKMGCPPEKIAVSRMGVDMTRFSPRPVK--------APATPLEIIS 227 (406)
T ss_pred ccchhhhhhhHHHHHHHHhCCEEEECCHHHHHHHHHcCCCHHHEEEcCCCCCHHHcCCCccc--------cCCCCeEEEE
Confidence 210 112345789999999999999998888888999999999998766532211 1123446788
Q ss_pred ecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeE
Q 036427 356 MGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCI 430 (536)
Q Consensus 356 ~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~ 430 (536)
+|+....|+...+++++..... ..+++++ +++|.++ ++++.++++++.++|+|.|++ +++.++|+.||++
T Consensus 228 vGrl~~~Kg~~~ll~a~~~l~~----~~~~~~l-~ivG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~aDv~ 302 (406)
T PRK15427 228 VARLTEKKGLHVAIEACRQLKE----QGVAFRY-RILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVF 302 (406)
T ss_pred EeCcchhcCHHHHHHHHHHHHh----hCCCEEE-EEEECchhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhCCEE
Confidence 8888777888888877765432 2456665 4567765 455667777888899999998 4899999999999
Q ss_pred EECC---------C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC--CHHHHHHHHHHHhCCCHHHHH
Q 036427 431 ITKA---------G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK--SPKEIANMVSQWFGPKIDELK 497 (536)
Q Consensus 431 V~~s---------G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~--d~~~La~~I~~ll~~d~~~~~ 497 (536)
|+|| | |++++|||++|+|||+++.++..| ++++ ..|.+++ |+++++++|.+++++|++.++
T Consensus 303 v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E------~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~ 376 (406)
T PRK15427 303 LLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPE------LVEADKSGWLVPENDAQALAQRLAAFSQLDTDELA 376 (406)
T ss_pred EECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchh------hhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHH
Confidence 9986 3 789999999999999998655443 5554 4676764 899999999999976789999
Q ss_pred HHHHHHHHhc-CCchHHHHHHHHHHHHhh
Q 036427 498 AMSQNALKLA-RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 498 ~m~~~a~~~a-~~~~~~~i~~~i~~l~~~ 525 (536)
+|+++|++.+ ..+.++++++.+.+++++
T Consensus 377 ~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 377 PVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 9999999876 558999999999998865
No 17
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.94 E-value=2.5e-24 Score=226.86 Aligned_cols=340 Identities=12% Similarity=0.057 Sum_probs=226.0
Q ss_pred eEEEEeC---CCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 146 KVLILMS---DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 146 KIL~~~~---~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
||++++. ...||..+.+..|+++|.++ ||+|.|.+...+.. ...... ...-+...........
T Consensus 1 kI~~v~~~~~p~~GG~e~~~~~la~~L~~~---G~~V~v~~~~~~~~-~~~~~~-------~~~i~v~~~p~~~~~~--- 66 (398)
T cd03796 1 RICMVSDFFYPNLGGVETHIYQLSQCLIKR---GHKVVVITHAYGNR-VGIRYL-------TNGLKVYYLPFVVFYN--- 66 (398)
T ss_pred CeeEEeeccccccccHHHHHHHHHHHHHHc---CCeeEEEeccCCcC-CCcccc-------cCceeEEEecceeccC---
Confidence 7888864 23489999999999999998 78887775422110 000000 0000011100000000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchH--HHHHHHHcCCCCCceEEEEecCCCCc----------cccc
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHV--PLRILRAKGLLKKIVFTTVITDLSTC----------HPTW 290 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i--~~~~~~~~g~~~~ip~v~~~~d~~~~----------~~~~ 290 (536)
..... ........+.+.+++.+||+||++.+..... .+.+++..+ +|+++..|+.... ..++
T Consensus 67 ~~~~~--~~~~~~~~l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~----~~~v~t~h~~~~~~~~~~~~~~~~~~~ 140 (398)
T cd03796 67 QSTLP--TFFGTFPLLRNILIRERITIVHGHQAFSALAHEALLHARTMG----LKTVFTDHSLFGFADASSIHTNKLLRF 140 (398)
T ss_pred Ccccc--chhhhHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHhhhcC----CcEEEEecccccccchhhHHhhHHHHH
Confidence 00000 1112234666778889999999998653321 122233333 7887666653211 1133
Q ss_pred ccccCCEEEEcCHHHHHHH-HHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHH
Q 036427 291 FHKLVTRCYCPTADVAKRA-MKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATA 369 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l-~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l 369 (536)
..+.+|.++++|+...+.+ .+.+++++++.+++|+++...+.+.... .+++.++++++|+....|+...++
T Consensus 141 ~~~~~d~ii~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~--------~~~~~~~i~~~grl~~~Kg~~~li 212 (398)
T cd03796 141 SLADVDHVICVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSK--------RDNDKITIVVISRLVYRKGIDLLV 212 (398)
T ss_pred hhccCCEEEEecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCccc--------CCCCceEEEEEeccchhcCHHHHH
Confidence 4678999999999988765 3457778899999999987765443211 234566788888877778877777
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHHH
Q 036427 370 RALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTIA 440 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tll 440 (536)
+++....+ ..+++++ +++|.++ .+.+.+++.++.++|+|+|++ +++..+|+.||++++|| | |.+++
T Consensus 213 ~a~~~l~~----~~~~~~l-~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~ 287 (398)
T cd03796 213 GIIPEICK----KHPNVRF-IIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIV 287 (398)
T ss_pred HHHHHHHh----hCCCEEE-EEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHH
Confidence 77754332 2467765 4556664 455666777888899999997 58999999999999998 3 89999
Q ss_pred HHHHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHh-cCCchHHHHHHH
Q 036427 441 EAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWFGPKIDELKAMSQNALKL-ARPDAVFRIVQD 518 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~-a~~~~~~~i~~~ 518 (536)
|||+||+|||+++.++..| +++++.+.++ .|+++++++|.++++ ++.....+++++++. .+.+++++++++
T Consensus 288 EAma~G~PVI~s~~gg~~e------~i~~~~~~~~~~~~~~l~~~l~~~l~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~ 360 (398)
T cd03796 288 EAASCGLLVVSTRVGGIPE------VLPPDMILLAEPDVESIVRKLEEAIS-ILRTGKHDPWSFHNRVKKMYSWEDVAKR 360 (398)
T ss_pred HHHHcCCCEEECCCCCchh------heeCCceeecCCCHHHHHHHHHHHHh-ChhhhhhHHHHHHHHHHhhCCHHHHHHH
Confidence 9999999999999765444 5555555544 489999999999999 766665677777664 566899999999
Q ss_pred HHHHHhh
Q 036427 519 LHELVRQ 525 (536)
Q Consensus 519 i~~l~~~ 525 (536)
+.+++++
T Consensus 361 ~~~~y~~ 367 (398)
T cd03796 361 TEKVYDR 367 (398)
T ss_pred HHHHHHH
Confidence 9887765
No 18
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.94 E-value=1.7e-23 Score=214.01 Aligned_cols=340 Identities=18% Similarity=0.164 Sum_probs=234.4
Q ss_pred eEEEEeCCCC-chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 146 KVLILMSDTG-GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 146 KIL~~~~~~G-gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
||++++..++ ||..+.+..|++.|.+. ++++.++....... .. ..+......... ..... .
T Consensus 1 ~i~~i~~~~~~gG~~~~~~~l~~~l~~~---~~~v~~~~~~~~~~------~~---~~~~~~~i~v~~-~~~~~-~---- 62 (365)
T cd03807 1 KVLHVITGLDVGGAERMLVRLLKGLDRD---RFEHVVISLTDRGE------LG---EELEEAGVPVYC-LGKRP-G---- 62 (365)
T ss_pred CeEEEEeeccCccHHHHHHHHHHHhhhc---cceEEEEecCcchh------hh---HHHHhcCCeEEE-Eeccc-c----
Confidence 6888876532 89999999999999887 67776654322110 00 001111100000 00000 0
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc-----------cccccc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH-----------PTWFHK 293 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~-----------~~~~~~ 293 (536)
........++.+++++.+||+|+++............+..+ ++|++...++..... ..++.+
T Consensus 63 ----~~~~~~~~~~~~~~~~~~~div~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (365)
T cd03807 63 ----RPDPGALLRLYKLIRRLRPDVVHTWMYHADLYGGLAARLAG---VPPVIWGIRHSDLDLGKKSTRLVARLRRLLSS 135 (365)
T ss_pred ----cccHHHHHHHHHHHHhhCCCEEEeccccccHHHHHHHHhcC---CCcEEEEecCCcccccchhHhHHHHHHHHhcc
Confidence 01223445677889999999999986543322222223212 367776666543221 133456
Q ss_pred cCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCC-CchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHH
Q 036427 294 LVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPV-RPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARAL 372 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~-~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al 372 (536)
.++.+++.|+...+.+.+.+++..++.+++|+++...+.+. ......+++++++++.+.++++|+....++...+++++
T Consensus 136 ~~~~~i~~s~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 215 (365)
T cd03807 136 FIPLIVANSAAAAEYHQAIGYPPKKIVVIPNGVDTERFSPDLDARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA 215 (365)
T ss_pred ccCeEEeccHHHHHHHHHcCCChhheeEeCCCcCHHhcCCcccchHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHH
Confidence 78888999999999998888888899999999987655433 23445667888888888888888877778877777777
Q ss_pred HHHhhhcccCCCCcEEEEEecCCH---HHHHHHH-cCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHH
Q 036427 373 GNALYDENLGEPIGQVLVICGRNK---KLANKLL-STDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMI 444 (536)
Q Consensus 373 ~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~-~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma 444 (536)
..... ..+++++ +++|.+. ...+... +.+...++.+.|..+++.++|+.||++++|+ | |++++|||+
T Consensus 216 ~~l~~----~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a 290 (365)
T cd03807 216 ALLLK----KFPNARL-LLVGDGPDRANLELLALKELGLEDKVILLGERSDVPALLNALDVFVLSSLSEGFPNVLLEAMA 290 (365)
T ss_pred HHHHH----hCCCeEE-EEecCCcchhHHHHHHHHhcCCCceEEEccccccHHHHHHhCCEEEeCCccccCCcHHHHHHh
Confidence 55433 2456765 4456654 2233333 5567788999999999999999999999998 3 899999999
Q ss_pred hCCcEEEeccCCccccCChhhHhhCCceeec--CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC-CchHHHHHHHHHH
Q 036427 445 RGLPIILNDFIAGQEAGNVPYVVENGCGKFS--KSPKEIANMVSQWFGPKIDELKAMSQNALKLAR-PDAVFRIVQDLHE 521 (536)
Q Consensus 445 ~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~--~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~-~~~~~~i~~~i~~ 521 (536)
||+|||+++.++..+ +... .|.++ .|+++++++|..+++ +++.++++++++++.+. .++++++++.+.+
T Consensus 291 ~g~PvI~~~~~~~~e------~~~~-~g~~~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 362 (365)
T cd03807 291 CGLPVVATDVGDNAE------LVGD-TGFLVPPGDPEALAEAIEALLA-DPALRQALGEAARERIEENFSIEAMVEAYEE 362 (365)
T ss_pred cCCCEEEcCCCChHH------Hhhc-CCEEeCCCCHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999988654333 4444 55555 489999999999999 99999999999999875 4899999999988
Q ss_pred HH
Q 036427 522 LV 523 (536)
Q Consensus 522 l~ 523 (536)
++
T Consensus 363 ~y 364 (365)
T cd03807 363 LY 364 (365)
T ss_pred Hh
Confidence 75
No 19
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.94 E-value=1e-23 Score=217.59 Aligned_cols=322 Identities=17% Similarity=0.146 Sum_probs=219.6
Q ss_pred eEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhc-cccceeecCCCccccc
Q 036427 146 KVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHG-PLWKMTYYGTAPRVIH 223 (536)
Q Consensus 146 KIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~-~l~~~~~~~~~~~~~~ 223 (536)
||++++.. ..||....+..++++|.+. +++|.++....... ..... ....+ ..+.... ...
T Consensus 1 kIl~~~~~~~~GG~~~~~~~l~~~L~~~---~~~v~~i~~~~~~~-----~~~~~---~~~~~~~~~~~~~---~~~--- 63 (358)
T cd03812 1 KILHIVGTMNRGGIETFIMNYYRNLDRS---KIQFDFLVTSKEEG-----DYDDE---IEKLGGKIYYIPA---RKK--- 63 (358)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHhcCcc---ceEEEEEEeCCCCc-----chHHH---HHHcCCeEEEecC---CCc---
Confidence 78888865 3489999999999999977 78887765432211 01000 11111 1111000 000
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceE-EEEecCCCCcc------------ccc
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVF-TTVITDLSTCH------------PTW 290 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~-v~~~~d~~~~~------------~~~ 290 (536)
........+.+.+++.+||+||++.+....++..+.+..+ .|. +...++..... ...
T Consensus 64 ------~~~~~~~~~~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (358)
T cd03812 64 ------NPLKYFKKLYKLIKKNKYDIVHVHGSSASGFILLAAKKAG----VKVRIAHSHNTSDSHDKKKKILKYKVLRKL 133 (358)
T ss_pred ------cHHHHHHHHHHHHhcCCCCEEEEeCcchhHHHHHHHhhCC----CCeEEEEeccccccccccchhhHHHHHHHH
Confidence 1112334566678899999999988764444444444433 443 33333321110 123
Q ss_pred ccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHH
Q 036427 291 FHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATAR 370 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~ 370 (536)
+.+.++.++++++...+.+... .++.++.+++|+++...+.+.....+.++..+...+.+.++++|+....|+...+++
T Consensus 134 ~~~~~~~~i~~s~~~~~~~~~~-~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~ 212 (358)
T cd03812 134 INRLATDYLACSEEAGKWLFGK-VKNKKFKVIPNGIDLEKFIFNEEIRKKRRELGILEDKFVIGHVGRFSEQKNHEFLIE 212 (358)
T ss_pred HHhcCCEEEEcCHHHHHHHHhC-CCcccEEEEeccCcHHHcCCCchhhhHHHHcCCCCCCEEEEEEeccccccChHHHHH
Confidence 3567899999999999988766 567889999999998766543322233556677777888888988877788877777
Q ss_pred HHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHH
Q 036427 371 ALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAM 443 (536)
Q Consensus 371 al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAm 443 (536)
++..... ..+++++ +++|.++ .+.+.+++.++.++|.+.|+.+++.++|+.||++|+|| | |++++|||
T Consensus 213 a~~~l~~----~~~~~~l-~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~~E~~~~~~lEAm 287 (358)
T cd03812 213 IFAELLK----KNPNAKL-LLVGDGELEEEIKKKVKELGLEDKVIFLGVRNDVPELLQAMDVFLFPSLYEGLPLVLIEAQ 287 (358)
T ss_pred HHHHHHH----hCCCeEE-EEEeCCchHHHHHHHHHhcCCCCcEEEecccCCHHHHHHhcCEEEecccccCCCHHHHHHH
Confidence 7765543 2466765 4557665 34555666778889999999889999999999999998 4 89999999
Q ss_pred HhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc
Q 036427 444 IRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLA 507 (536)
Q Consensus 444 a~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a 507 (536)
++|+|||+++.++..+ +++++.+++.. ++++++++|.++++ +++.++.+...+....
T Consensus 288 a~G~PvI~s~~~~~~~------~i~~~~~~~~~~~~~~~~a~~i~~l~~-~~~~~~~~~~~~~~~~ 346 (358)
T cd03812 288 ASGLPCILSDTITKEV------DLTDLVKFLSLDESPEIWAEEILKLKS-EDRRERSSESIKKKGL 346 (358)
T ss_pred HhCCCEEEEcCCchhh------hhccCccEEeCCCCHHHHHHHHHHHHh-Ccchhhhhhhhhhccc
Confidence 9999999999766444 44456666553 57999999999999 9999988887776643
No 20
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.94 E-value=2.8e-24 Score=223.29 Aligned_cols=334 Identities=15% Similarity=0.167 Sum_probs=214.1
Q ss_pred ceEEEEeCCC--CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 145 KKVLILMSDT--GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 145 mKIL~~~~~~--GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
|||++++... -||.++....++++|.+. |+|++++++....... ..+ ......... ... ...
T Consensus 1 mkI~~~~~~~~~~GG~e~~~~~l~~~L~~~-~~g~~v~v~~~~~~~~--------~~~--~~~~~~~~~--~~~--~~~- 64 (359)
T PRK09922 1 MKIAFIGEAVSGFGGMETVISNVINTFEES-KINCEMFFFCRNDKMD--------KAW--LKEIKYAQS--FSN--IKL- 64 (359)
T ss_pred CeeEEecccccCCCchhHHHHHHHHHhhhc-CcceeEEEEecCCCCC--------hHH--HHhcchhcc--ccc--chh-
Confidence 8999997542 289999999999999997 7789998765422100 000 000000000 000 000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC-CCC-ccc-ccccccCCEEE
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD-LST-CHP-TWFHKLVTRCY 299 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~-~~~-~~~~~~~d~vi 299 (536)
.. ........++.+++++.+||+||++.+........+.+..+. +.+++.+.+. ... ... ....+.+|.++
T Consensus 65 ---~~-~~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~~~~~~~~~~~~~~~d~~i 138 (359)
T PRK09922 65 ---SF-LRRAKHVYNFSKWLKETQPDIVICIDVISCLYANKARKKSGK--QFKIFSWPHFSLDHKKHAECKKITCADYHL 138 (359)
T ss_pred ---hh-hcccHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHHHHhCC--CCeEEEEecCcccccchhhhhhhhcCCEEE
Confidence 00 001122356778999999999999876543222222233332 2344433321 110 111 11136889999
Q ss_pred EcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCC--CCCcHHHHHHHHHHHhh
Q 036427 300 CPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGE--GMGPIEATARALGNALY 377 (536)
Q Consensus 300 ~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~--g~k~~~~~l~al~~~l~ 377 (536)
++|+..++.+.+++++++++.+++||++.+.+....+. ..+.+.++++|+.. +.++...+++++...
T Consensus 139 ~~S~~~~~~~~~~~~~~~ki~vi~N~id~~~~~~~~~~---------~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~-- 207 (359)
T PRK09922 139 AISSGIKEQMMARGISAQRISVIYNPVEIKTIIIPPPE---------RDKPAVFLYVGRLKFEGQKNVKELFDGLSQT-- 207 (359)
T ss_pred EcCHHHHHHHHHcCCCHHHEEEEcCCCCHHHccCCCcc---------cCCCcEEEEEEEEecccCcCHHHHHHHHHhh--
Confidence 99999999999888888899999999985432211111 12356788888753 457777777766542
Q ss_pred hcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChh----hHHHHHhhcCeEEECC---C-hHHHHHHHHhC
Q 036427 378 DENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVS----KMEEAMGACDCIITKA---G-PGTIAEAMIRG 446 (536)
Q Consensus 378 ~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~----~l~~ll~~aDv~V~~s---G-~~tllEAma~G 446 (536)
.+++++ +++|.++ ++.+..++.++.++|+|.|+++ ++.++|+.||++|+|| | |++++|||+||
T Consensus 208 -----~~~~~l-~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G 281 (359)
T PRK09922 208 -----TGEWQL-HIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG 281 (359)
T ss_pred -----CCCeEE-EEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHcC
Confidence 134655 4556664 4555666777888999999974 5677788899999998 4 99999999999
Q ss_pred CcEEEeccCCccccCChhhHhhC-CceeecC--CHHHHHHHHHHHhCCCHH--HHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 447 LPIILNDFIAGQEAGNVPYVVEN-GCGKFSK--SPKEIANMVSQWFGPKID--ELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 447 lPVI~~~~~~~~e~~na~~lv~~-g~g~~~~--d~~~La~~I~~ll~~d~~--~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
+|||++++.++. ..++.+ ..|.+++ |+++++++|.++++ +++ ....++++++++..+....++++.+..
T Consensus 282 ~Pvv~s~~~~g~-----~eiv~~~~~G~lv~~~d~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (359)
T PRK09922 282 IPCISSDCMSGP-----RDIIKPGLNGELYTPGNIDEFVGKLNKVIS-GEVKYQHDAIPNSIERFYEVLYFKNLNNALFS 355 (359)
T ss_pred CCEEEeCCCCCh-----HHHccCCCceEEECCCCHHHHHHHHHHHHh-CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999833322 225554 4566664 89999999999999 887 456667777777776666666666655
Q ss_pred HH
Q 036427 522 LV 523 (536)
Q Consensus 522 l~ 523 (536)
+.
T Consensus 356 ~~ 357 (359)
T PRK09922 356 KL 357 (359)
T ss_pred Hh
Confidence 43
No 21
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.94 E-value=7.2e-24 Score=214.98 Aligned_cols=326 Identities=18% Similarity=0.186 Sum_probs=222.6
Q ss_pred eEEEEeCCCC--chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccccc
Q 036427 146 KVLILMSDTG--GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 146 KIL~~~~~~G--gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 223 (536)
||+|++.+.+ ||..+.+..++++|.+. |++|.++........ ........ +. ....... . .
T Consensus 1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~---g~~v~v~~~~~~~~~--~~~~~~~~----~~---~~~~~~~-~-~--- 63 (348)
T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEK---GHEVTIISLDKGEPP--FYELDPKI----KV---IDLGDKR-D-S--- 63 (348)
T ss_pred CeEEEeccccCCCChHHHHHHHHHHHHhC---CCeEEEEecCCCCCC--ccccCCcc----ce---eeccccc-c-c---
Confidence 6899886644 89999999999999987 788877755333200 00000000 00 0000000 0 0
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc---------ccccccc
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH---------PTWFHKL 294 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~---------~~~~~~~ 294 (536)
...........+.+++++.+||+|+++.+... .+......+ .+|.+...++..... .++..+.
T Consensus 64 ---~~~~~~~~~~~~~~~l~~~~~d~i~~~~~~~~--~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (348)
T cd03820 64 ---KLLARFKKLRRLRKLLKNNKPDVVISFLTSLL--TFLASLGLK---IVKLIVSEHNSPDAYKKRLRRLLLRRLLYRR 135 (348)
T ss_pred ---chhccccchHHHHHhhcccCCCEEEEcCchHH--HHHHHHhhc---cccEEEecCCCccchhhhhHHHHHHHHHHhc
Confidence 00011223356777889999999999987621 122222222 136665555432111 2344678
Q ss_pred CCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHH
Q 036427 295 VTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGN 374 (536)
Q Consensus 295 ~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~ 374 (536)
+|.+++.|+..+ ......+..++.+++|+++....... ...+.+.++++|+....++...+++++.+
T Consensus 136 ~d~ii~~s~~~~--~~~~~~~~~~~~vi~~~~~~~~~~~~-----------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~ 202 (348)
T cd03820 136 ADAVVVLTEEDR--ALYYKKFNKNVVVIPNPLPFPPEEPS-----------SDLKSKRILAVGRLVPQKGFDLLIEAWAK 202 (348)
T ss_pred CCEEEEeCHHHH--HHhhccCCCCeEEecCCcChhhcccc-----------CCCCCcEEEEEEeeccccCHHHHHHHHHH
Confidence 999999999987 22334567889999999987654432 12456678888887777777777766654
Q ss_pred HhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhCC
Q 036427 375 ALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRGL 447 (536)
Q Consensus 375 ~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~Gl 447 (536)
... ..+++++ +++|.++ .+.+.+++.+...+|.+.|+.+++.++|+.||++|.|+ | |++++|||++|+
T Consensus 203 l~~----~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~ 277 (348)
T cd03820 203 IAK----KHPDWKL-RIVGDGPEREALEALIKELGLEDRVILLGFTKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGL 277 (348)
T ss_pred HHh----cCCCeEE-EEEeCCCCHHHHHHHHHHcCCCCeEEEcCCcchHHHHHHhCCEEEeCccccccCHHHHHHHHcCC
Confidence 432 2466665 4456554 34445666777889999999889999999999999998 3 899999999999
Q ss_pred cEEEeccCCccccCChhhHhhCC-ceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 036427 448 PIILNDFIAGQEAGNVPYVVENG-CGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLH 520 (536)
Q Consensus 448 PVI~~~~~~~~e~~na~~lv~~g-~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~ 520 (536)
|||+++..+..+ .+++.+ .|.+++ |+++++++|.++++ +++.+++|++++++..+.++++++++.+.
T Consensus 278 Pvi~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 278 PVISFDCPTGPS-----EIIEDGVNGLLVPNGDVEALAEALLRLME-DEELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred CEEEecCCCchH-----hhhccCcceEEeCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 999998654433 366666 777775 78999999999999 99999999999998899999999998774
No 22
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.94 E-value=1.2e-23 Score=216.76 Aligned_cols=318 Identities=17% Similarity=0.155 Sum_probs=217.3
Q ss_pred chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhc-cccceeecCCCcccccchhhhhhhHHH
Q 036427 156 GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHG-PLWKMTYYGTAPRVIHQSNFAATSTFI 234 (536)
Q Consensus 156 gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (536)
||..+.+..|+++|.+. |++|.++..... .... ....+ ......... .. .......
T Consensus 10 gG~e~~~~~l~~~L~~~---g~~v~v~~~~~~--------~~~~---~~~~~~~~~~~~~~~---~~------~~~~~~~ 66 (355)
T cd03819 10 GGVERGTLELARALVER---GHRSLVASAGGR--------LVAE---LEAEGSRHIKLPFIS---KN------PLRILLN 66 (355)
T ss_pred CcHHHHHHHHHHHHHHc---CCEEEEEcCCCc--------hHHH---HHhcCCeEEEccccc---cc------hhhhHHH
Confidence 89999999999999998 888877753211 0000 11111 011100000 00 0012223
Q ss_pred HHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc--cccccccCCEEEEcCHHHHHHHHH-
Q 036427 235 AREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH--PTWFHKLVTRCYCPTADVAKRAMK- 311 (536)
Q Consensus 235 ~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~--~~~~~~~~d~vi~~S~~~~~~l~~- 311 (536)
...+.+++++.+||+||+++.........+.+.. ++|++...|+..... ..++.+.+|.++++|+...+.+.+
T Consensus 67 ~~~l~~~~~~~~~dii~~~~~~~~~~~~~~~~~~----~~~~i~~~h~~~~~~~~~~~~~~~~~~vi~~s~~~~~~~~~~ 142 (355)
T cd03819 67 VARLRRLIREEKVDIVHARSRAPAWSAYLAARRT----RPPFVTTVHGFYSVNFRYNAIMARGDRVIAVSNFIADHIREN 142 (355)
T ss_pred HHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhc----CCCEEEEeCCchhhHHHHHHHHHhcCEEEEeCHHHHHHHHHh
Confidence 4567788999999999998765433333333333 389887777764222 234456899999999999999884
Q ss_pred hCCCCCCEEEeCCCCCCCCCCCCCc-h---HHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcE
Q 036427 312 AGLQASQIKVYGLPVRPSFVKPVRP-K---VELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQ 387 (536)
Q Consensus 312 ~g~~~~ki~vignpv~~~~~~~~~~-~---~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~ 387 (536)
++++..++.+++|+++...+.+... . ...++.++++++.++++++|+....++...+++++..... ..++++
T Consensus 143 ~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~----~~~~~~ 218 (355)
T cd03819 143 YGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKK----DDPDVH 218 (355)
T ss_pred cCCChhhEEEecCCccccccCccccchHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHh----cCCCeE
Confidence 6788889999999998877654321 1 1256677777777888888887767777777776654432 135566
Q ss_pred EEEEecCCH---HH----HHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC----C-hHHHHHHHHhCCcEEEeccC
Q 036427 388 VLVICGRNK---KL----ANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA----G-PGTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 388 ~lvi~G~~~---~l----~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s----G-~~tllEAma~GlPVI~~~~~ 455 (536)
+ +++|.+. .+ .+.+++.+..++|++.|+.+++.++|+.||++++|| | |++++|||++|+|||+++.+
T Consensus 219 l-~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~ 297 (355)
T cd03819 219 L-LIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG 297 (355)
T ss_pred E-EEEECCcccchHHHHHHHHHHHcCCcceEEEcCCcccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC
Confidence 5 4556543 22 234455567788999999999999999999999998 2 89999999999999999865
Q ss_pred CccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCc
Q 036427 456 AGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPD 510 (536)
Q Consensus 456 ~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~ 510 (536)
+..+ .+.+...|.++. |+++++++|..++..+++.+++|+++|++.+.++
T Consensus 298 ~~~e-----~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 298 GARE-----TVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred CcHH-----HHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 4333 233444677664 8999999996555438999999999999987653
No 23
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.93 E-value=1.8e-23 Score=214.04 Aligned_cols=342 Identities=17% Similarity=0.152 Sum_probs=223.2
Q ss_pred eEEEEeCC----CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 146 KVLILMSD----TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 146 KIL~~~~~----~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
||||++.. .+||+.+.+..|+++|.++ |++|.++.................+ ... ..+.. ..... ..
T Consensus 1 kIl~i~~~~~~~~~gG~~~~~~~l~~~L~~~---g~~v~v~~~~~~~~~~~~~~~~~~~---~~~-~~~~~-~~~~~-~~ 71 (359)
T cd03823 1 RILVVNHLYPPRSVGGAEVVAHDLAEALAKR---GHEVAVLTAGEDPPRQDKEVIGVVV---YGR-PIDEV-LRSAL-PR 71 (359)
T ss_pred CeeEEcccCCcccccchHHHHHHHHHHHHhc---CCceEEEeCCCCCCCccccccccee---ecc-ccccc-cCCCc-hh
Confidence 68888744 2479999999999999988 7888776543321111000000000 000 00000 00000 00
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCCCcc--cccccccCCEE
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLSTCH--PTWFHKLVTRC 298 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~~~~--~~~~~~~~d~v 298 (536)
................+.+++++.+||+|+++.+...... +..++..+ +|++...+|+.... ..+.....|.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~----~~~i~~~hd~~~~~~~~~~~~~~~d~i 147 (359)
T cd03823 72 DLFHLSDYDNPAVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAARDRG----IPIVLTLHDYWLICPRQGLFKKGGDAV 147 (359)
T ss_pred hhhHHHhccCHHHHHHHHHHHHHcCCCEEEECCccchHHHHHHHHHhcC----CCEEEEEeeeeeecchhhhhccCCCEE
Confidence 0001111123334567788899999999999886433222 22233333 88887777754221 22334445999
Q ss_pred EEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhh
Q 036427 299 YCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYD 378 (536)
Q Consensus 299 i~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~ 378 (536)
+++|+...+.+.+.+.++.++.+++|+++...+.+... +.+.+.++++++|+....++...+++++.+..
T Consensus 148 i~~s~~~~~~~~~~~~~~~~~~vi~n~~~~~~~~~~~~--------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~-- 217 (359)
T cd03823 148 IAPSRFLLDRYVANGLFAEKISVIRNGIDLDRAKRPRR--------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLP-- 217 (359)
T ss_pred EEeCHHHHHHHHHcCCCccceEEecCCcChhhcccccc--------CCCCCceEEEEEecCccccCHHHHHHHHHHHH--
Confidence 99999999999888776678999999999876654321 23355667778888777777776666665432
Q ss_pred cccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC----C-hHHHHHHHHhCCcEEE
Q 036427 379 ENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA----G-PGTIAEAMIRGLPIIL 451 (536)
Q Consensus 379 ~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s----G-~~tllEAma~GlPVI~ 451 (536)
.+++++ +++|.+..............+|++.|++ +++.++|+.||++|+|+ | |++++|||++|+|||+
T Consensus 218 ----~~~~~l-~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~ 292 (359)
T cd03823 218 ----RGDIEL-VIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIA 292 (359)
T ss_pred ----hcCcEE-EEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEE
Confidence 145665 5557665222221111456789999998 69999999999999986 3 8899999999999999
Q ss_pred eccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 452 NDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 452 ~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
++.++..+ .+.+.+.|.++. |+++++++|.++++ +++.+++|++++++.... +.+++.+.++++
T Consensus 293 ~~~~~~~e-----~i~~~~~g~~~~~~d~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 358 (359)
T cd03823 293 SDIGGMAE-----LVRDGVNGLLFPPGDAEDLAAALERLID-DPDLLERLRAGIEPPRSI---EDQAEEYLKLYR 358 (359)
T ss_pred CCCCCHHH-----HhcCCCcEEEECCCCHHHHHHHHHHHHh-ChHHHHHHHHhHHHhhhH---HHHHHHHHHHhh
Confidence 98654333 234444677664 78999999999999 999999999999887655 778888887764
No 24
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.93 E-value=9e-24 Score=216.97 Aligned_cols=335 Identities=19% Similarity=0.213 Sum_probs=222.3
Q ss_pred eEEEEeCCC---CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 146 KVLILMSDT---GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 146 KIL~~~~~~---GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
||++++... .||+..++..|+++|.++ ||+|.++............. . ... +......+. ...
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~---g~~v~~~~~~~~~~~~~~~~---~----~~~-~~~~~~~~~-~~~-- 66 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRAR---GHEVLVIAPGPFRESEGPAR---V----VPV-PSVPLPGYP-EIR-- 66 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHC---CCEEEEEeCCchhhccCCCC---c----eee-cccccCccc-ceE--
Confidence 688887432 279999999999999998 77887765432211000000 0 000 000000000 000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchH-HHHHHHHcCCCCCceEEEEecCCCCc---------------
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHV-PLRILRAKGLLKKIVFTTVITDLSTC--------------- 286 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i-~~~~~~~~g~~~~ip~v~~~~d~~~~--------------- 286 (536)
........+.+.+++.+||+||++.+..... ...+.++. ++|++...++....
T Consensus 67 -------~~~~~~~~~~~~~~~~~pdii~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 135 (364)
T cd03814 67 -------LALPPRRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRL----GIPVVTSYHTDFPEYLRYYGLGPLSWLAW 135 (364)
T ss_pred -------ecccchhhHHHHHHhcCCCEEEEeccchhhHHHHHHHHHc----CCCEEEEEecChHHHhhhcccchHhHhhH
Confidence 0111223566778899999999886544322 22333333 38887655543210
Q ss_pred -ccccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcH
Q 036427 287 -HPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPI 365 (536)
Q Consensus 287 -~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~ 365 (536)
..+++.+.+|.++++|+...+.+...+ ..++.+++++++...+.+.......+++++ ..+.+.++++|+....++.
T Consensus 136 ~~~~~~~~~~d~i~~~s~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~k~~ 212 (364)
T cd03814 136 AYLRWFHNRADRVLVPSPSLADELRARG--FRRVRLWPRGVDTELFHPRRRDEALRARLG-PPDRPVLLYVGRLAPEKNL 212 (364)
T ss_pred HHHHHHHHhCCEEEeCCHHHHHHHhccC--CCceeecCCCccccccCcccccHHHHHHhC-CCCCeEEEEEeccccccCH
Confidence 113456788999999999998665544 356889999998877665443444555555 4455677777776666776
Q ss_pred HHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHH
Q 036427 366 EATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTI 439 (536)
Q Consensus 366 ~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tl 439 (536)
..+++++.+... . +++++ +++|.++.. +.++ ....+|.+.|++ +++.++|+.||++++|+ | |+++
T Consensus 213 ~~~i~~~~~l~~----~-~~~~l-~i~G~~~~~-~~~~--~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~ 283 (364)
T cd03814 213 EALLDADLPLRR----R-PPVRL-VIVGDGPAR-ARLE--ARYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVV 283 (364)
T ss_pred HHHHHHHHHhhh----c-CCceE-EEEeCCchH-HHHh--ccCCcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHH
Confidence 666665544321 2 45654 556766522 2233 345689999976 58999999999999997 3 8999
Q ss_pred HHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHH
Q 036427 440 AEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQ 517 (536)
Q Consensus 440 lEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~ 517 (536)
+|||+||+|||+++.++..+ .+.+.+.|.++. +.++++++|.++++ +++.+++|++++++.+..++++++++
T Consensus 284 lEa~a~g~PvI~~~~~~~~~-----~i~~~~~g~~~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (364)
T cd03814 284 LEAMASGLPVVAPDAGGPAD-----IVTDGENGLLVEPGDAEAFAAALAALLA-DPELRRRMAARARAEAERRSWEAFLD 357 (364)
T ss_pred HHHHHcCCCEEEcCCCCchh-----hhcCCcceEEcCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHhhcCHHHHHH
Confidence 99999999999998655433 244457777764 78889999999999 99999999999999998899999999
Q ss_pred HHHHHH
Q 036427 518 DLHELV 523 (536)
Q Consensus 518 ~i~~l~ 523 (536)
.+.+++
T Consensus 358 ~~~~~~ 363 (364)
T cd03814 358 NLLEAY 363 (364)
T ss_pred HHHHhh
Confidence 998875
No 25
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.93 E-value=1.3e-23 Score=219.77 Aligned_cols=339 Identities=14% Similarity=0.100 Sum_probs=222.5
Q ss_pred ceEEEEeCC----CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcc
Q 036427 145 KKVLILMSD----TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPR 220 (536)
Q Consensus 145 mKIL~~~~~----~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~ 220 (536)
|||++++.. ..||....+..|+++|.++ ++++|++..... ....++. ... +.....
T Consensus 1 mkI~~i~~~~~p~~~GG~~~~v~~l~~~l~~~--~~v~v~~~~~~~----~~~~~~~-----------~~~---~~~~~~ 60 (388)
T TIGR02149 1 MKVTVLTREYPPNVYGGAGVHVEELTRELARL--MDVDVRCFGDQR----FDSEGLT-----------VKG---YRPWSE 60 (388)
T ss_pred CeeEEEecccCccccccHhHHHHHHHHHHHHh--cCeeEEcCCCch----hcCCCeE-----------EEE---ecChhh
Confidence 799999743 2378899999999999886 366666543211 0000100 000 000000
Q ss_pred cccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc--------------
Q 036427 221 VIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC-------------- 286 (536)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~-------------- 286 (536)
... ... ........+.......+||+||++.......+..+.+..+ +|++...|+....
T Consensus 61 -~~~-~~~-~~~~~~~~~~~~~~~~~~divh~~~~~~~~~~~~~~~~~~----~p~v~~~h~~~~~~~~~~~~~~~~~~~ 133 (388)
T TIGR02149 61 -LKE-ANK-ALGTFSVDLAMANDPVDADVVHSHTWYTFLAGHLAKKLYD----KPLVVTAHSLEPLRPWKEEQLGGGYKL 133 (388)
T ss_pred -ccc-hhh-hhhhhhHHHHHhhCCCCCCeEeecchhhhhHHHHHHHhcC----CCEEEEeecccccccccccccccchhH
Confidence 000 000 0000011111122335799999987544322232233333 8888777665311
Q ss_pred ---ccccccccCCEEEEcCHHHHHHHHHh--CCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCC
Q 036427 287 ---HPTWFHKLVTRCYCPTADVAKRAMKA--GLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEG 361 (536)
Q Consensus 287 ---~~~~~~~~~d~vi~~S~~~~~~l~~~--g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g 361 (536)
..++..+.+|.++++|+..++.+.+. +++..++.+++|+++...+.+. .....+++++++++.++++++|+...
T Consensus 134 ~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~Grl~~ 212 (388)
T TIGR02149 134 SSWAEKTAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPD-DGNVVLDRYGIDRSRPYILFVGRITR 212 (388)
T ss_pred HHHHHHHHHhhCCEEEEccHHHHHHHHHHcCCCCcceEEEecCCCChhhcCCC-chHHHHHHhCCCCCceEEEEEccccc
Confidence 01233567899999999999988775 5667889999999998776543 34567888999888888999988877
Q ss_pred CCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCC--HHHHHH----HHcCCC-CCCEEEe-cCh--hhHHHHHhhcCeEE
Q 036427 362 MGPIEATARALGNALYDENLGEPIGQVLVICGRN--KKLANK----LLSTDW-KIPVQVK-GFV--SKMEEAMGACDCII 431 (536)
Q Consensus 362 ~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~--~~l~~~----l~~~~~-~~~V~~~-G~v--~~l~~ll~~aDv~V 431 (536)
.|+...+++++.+. . ++.++++++|.. +++.+. +.+... ..++.+. |++ +++.++|+.||++|
T Consensus 213 ~Kg~~~li~a~~~l-~------~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v 285 (388)
T TIGR02149 213 QKGVPHLLDAVHYI-P------KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFV 285 (388)
T ss_pred ccCHHHHHHHHHHH-h------hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEE
Confidence 78888777776543 1 345555543322 223233 333332 2357765 455 58999999999999
Q ss_pred ECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC--CH------HHHHHHHHHHhCCCHHHHHH
Q 036427 432 TKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK--SP------KEIANMVSQWFGPKIDELKA 498 (536)
Q Consensus 432 ~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~--d~------~~La~~I~~ll~~d~~~~~~ 498 (536)
+|| + |.+++|||++|+|||+++.++..| +++. ..|.+++ |+ ++++++|.++++ +++.+++
T Consensus 286 ~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e------~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~-~~~~~~~ 358 (388)
T TIGR02149 286 CPSIYEPLGIVNLEAMACGTPVVASATGGIPE------VVVDGETGFLVPPDNSDADGFQAELAKAINILLA-DPELAKK 358 (388)
T ss_pred eCCccCCCChHHHHHHHcCCCEEEeCCCCHHH------HhhCCCceEEcCCCCCcccchHHHHHHHHHHHHh-CHHHHHH
Confidence 997 3 899999999999999999654333 4444 4577764 56 899999999999 9999999
Q ss_pred HHHHHHHhc-CCchHHHHHHHHHHHHhh
Q 036427 499 MSQNALKLA-RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 499 m~~~a~~~a-~~~~~~~i~~~i~~l~~~ 525 (536)
|++++++.+ +.++|+.+++.+.+++++
T Consensus 359 ~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 359 MGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 999999876 568999999999988764
No 26
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.93 E-value=2e-23 Score=234.06 Aligned_cols=264 Identities=13% Similarity=0.042 Sum_probs=188.9
Q ss_pred CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc-------------------c--c------ccccccCCEE
Q 036427 246 QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC-------------------H--P------TWFHKLVTRC 298 (536)
Q Consensus 246 kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~-------------------~--~------~~~~~~~d~v 298 (536)
.||+||+|......+.+.+.+..+ +|++...|.+... + . .+....+|.|
T Consensus 310 ~pDvIHaHyw~sG~aa~~L~~~lg----VP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~V 385 (1050)
T TIGR02468 310 WPYVIHGHYADAGDSAALLSGALN----VPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIV 385 (1050)
T ss_pred CCCEEEECcchHHHHHHHHHHhhC----CCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEE
Confidence 399999996433333333334344 8998666633110 0 0 2345788999
Q ss_pred EEcCHHHHHHHHH-hC-CC---------------------CCCEEEeCCCCCCCCCCCCCch------------------
Q 036427 299 YCPTADVAKRAMK-AG-LQ---------------------ASQIKVYGLPVRPSFVKPVRPK------------------ 337 (536)
Q Consensus 299 i~~S~~~~~~l~~-~g-~~---------------------~~ki~vignpv~~~~~~~~~~~------------------ 337 (536)
++.|+...+.+.. |+ ++ ..++.|||+++|...|.+....
T Consensus 386 IasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~ 465 (1050)
T TIGR02468 386 ITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPP 465 (1050)
T ss_pred EEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccch
Confidence 9999988876433 21 12 2489999999998877653110
Q ss_pred --HHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--------------HHHHH
Q 036427 338 --VELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK--------------KLANK 401 (536)
Q Consensus 338 --~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--------------~l~~~ 401 (536)
.+++ ++..++++++|+++|+....|++..+++++...... ...+++. +++|.++ ++.+.
T Consensus 466 ~~~~l~-r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l--~~~~nL~--LIiG~gdd~d~l~~~~~~~l~~L~~l 540 (1050)
T TIGR02468 466 IWSEIM-RFFTNPRKPMILALARPDPKKNITTLVKAFGECRPL--RELANLT--LIMGNRDDIDEMSSGSSSVLTSVLKL 540 (1050)
T ss_pred hhHHHH-hhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhh--ccCCCEE--EEEecCchhhhhhccchHHHHHHHHH
Confidence 1222 334567788999999998889988888888654321 0123333 3446432 13344
Q ss_pred HHcCCCCCCEEEecCh--hhHHHHHhhc----CeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-C
Q 036427 402 LLSTDWKIPVQVKGFV--SKMEEAMGAC----DCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-G 470 (536)
Q Consensus 402 l~~~~~~~~V~~~G~v--~~l~~ll~~a----Dv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g 470 (536)
++++++..+|.|+|++ +++.++|+.| |++|+|| | |++++||||||+|||+++.++..+ +++. .
T Consensus 541 i~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~E------II~~g~ 614 (1050)
T TIGR02468 541 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVD------IHRVLD 614 (1050)
T ss_pred HHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHH------HhccCC
Confidence 5566888899999986 5899999988 6999998 3 899999999999999999655333 5544 4
Q ss_pred ceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 471 CGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 471 ~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
.|++++ |+++|+++|..+++ +++.+++|++++++.+..++|+.+++.+++.+..
T Consensus 615 nGlLVdP~D~eaLA~AL~~LL~-Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~ 670 (1050)
T TIGR02468 615 NGLLVDPHDQQAIADALLKLVA-DKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIAS 670 (1050)
T ss_pred cEEEECCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 577765 89999999999999 9999999999999998889999999999887764
No 27
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.93 E-value=2.4e-23 Score=217.89 Aligned_cols=339 Identities=18% Similarity=0.164 Sum_probs=223.1
Q ss_pred chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccchhhhhhhHHHH
Q 036427 156 GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIA 235 (536)
Q Consensus 156 gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (536)
||+...+..|+++|.+. ||+|.|++............... ......... ... ................
T Consensus 21 GG~~~~~~~l~~~L~~~---g~~V~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~ 88 (398)
T cd03800 21 GGQNVYVLELARALARL---GHEVDIFTRRIDDALPPIVELAP-------GVRVVRVPA-GPA-EYLPKEELWPYLDEFA 88 (398)
T ss_pred CceeehHHHHHHHHhcc---CceEEEEEecCCcccCCcccccc-------ceEEEeccc-ccc-cCCChhhcchhHHHHH
Confidence 79999999999999998 78887765322211100000000 000000000 000 0000000011112234
Q ss_pred HHHHHHHHhh--CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc------------------cccccccC
Q 036427 236 REVAKGLMKY--QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH------------------PTWFHKLV 295 (536)
Q Consensus 236 ~~l~~~l~~~--kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~------------------~~~~~~~~ 295 (536)
..+.+.+++. +||+||++..........+++..+ +|++...++..... .++..+.+
T Consensus 89 ~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~----~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 164 (398)
T cd03800 89 DDLLRFLRREGGRPDLIHAHYWDSGLVALLLARRLG----IPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAA 164 (398)
T ss_pred HHHHHHHHhcCCCccEEEEecCccchHHHHHHhhcC----CceEEEeecccccCCcccccccccchhhhhhHHHHHHhhC
Confidence 4566777777 999999987554433333444443 78776655533110 02245679
Q ss_pred CEEEEcCHHHHHHHHHhC-CCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHH
Q 036427 296 TRCYCPTADVAKRAMKAG-LQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGN 374 (536)
Q Consensus 296 d~vi~~S~~~~~~l~~~g-~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~ 374 (536)
|.++++|+...+.+.+.+ .+..++.+++|+++.+.+.+.......++.++.+.+.++++++|+....++...+++++..
T Consensus 165 d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gr~~~~k~~~~ll~a~~~ 244 (398)
T cd03800 165 DRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPRILAVGRLDPRKGIDTLIRAYAE 244 (398)
T ss_pred CEEEEcCHHHHHHHHHHccccccccEEECCCCCccceecccchhhHHHhhccCCCCcEEEEEcccccccCHHHHHHHHHH
Confidence 999999999988887754 4455699999999987665543333335556667777888888887777777777777655
Q ss_pred HhhhcccCCCCcEEEEEecCCH--------HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHHH
Q 036427 375 ALYDENLGEPIGQVLVICGRNK--------KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTIA 440 (536)
Q Consensus 375 ~l~~~~~~~~~~~~lvi~G~~~--------~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tll 440 (536)
... ..+++++++++|... ++.+..++.+...++.+.|++ +++..+|+.||++++|| | |.+++
T Consensus 245 l~~----~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~ 320 (398)
T cd03800 245 LPE----LRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTAL 320 (398)
T ss_pred HHH----hCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHH
Confidence 432 245677655544321 112334555677899999997 48999999999999997 3 89999
Q ss_pred HHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHH
Q 036427 441 EAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQ 517 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~ 517 (536)
|||++|+|||+++..+..+ .+.+.+.|.+++ |+++++++|.++++ +++.+++|++++++.+ +.++++.+++
T Consensus 321 Ea~a~G~Pvi~s~~~~~~e-----~i~~~~~g~~~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~ 394 (398)
T cd03800 321 EAMACGLPVVATAVGGPRD-----IVVDGVTGLLVDPRDPEALAAALRRLLT-DPALRRRLSRAGLRRARARYTWERVAA 394 (398)
T ss_pred HHHhcCCCEEECCCCCHHH-----HccCCCCeEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999998654333 244445677775 89999999999999 9999999999999988 7789999888
Q ss_pred HHH
Q 036427 518 DLH 520 (536)
Q Consensus 518 ~i~ 520 (536)
.+.
T Consensus 395 ~~~ 397 (398)
T cd03800 395 RLL 397 (398)
T ss_pred HHh
Confidence 765
No 28
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.93 E-value=1.8e-23 Score=215.96 Aligned_cols=312 Identities=18% Similarity=0.176 Sum_probs=218.7
Q ss_pred ceEEEEeCCC-CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccccc
Q 036427 145 KKVLILMSDT-GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 145 mKIL~~~~~~-GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 223 (536)
||||+++... .||+.+.+..++++|.+. ||+|.+......
T Consensus 1 MkIl~~~~~~~~gG~~~~~~~l~~~l~~~---G~~v~v~~~~~~------------------------------------ 41 (365)
T cd03825 1 MKVLHLNTSDISGGAARAAYRLHRALQAA---GVDSTMLVQEKK------------------------------------ 41 (365)
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHHHhc---CCceeEEEeecc------------------------------------
Confidence 7999997653 389999999999999998 677766653211
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc----------------
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH---------------- 287 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~---------------- 287 (536)
.+.+.++..+||+||++......+.+..+.+.. .++|.+...||+....
T Consensus 42 -------------~~~~~~~~~~~diih~~~~~~~~~~~~~~~~~~--~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~ 106 (365)
T cd03825 42 -------------ALISKIEIINADIVHLHWIHGGFLSIEDLSKLL--DRKPVVWTLHDMWPFTGGCHYPGGCDRYKTEC 106 (365)
T ss_pred -------------hhhhChhcccCCEEEEEccccCccCHHHHHHHH--cCCCEEEEcccCcccccccCCccccccccccC
Confidence 112335678899999876332222222222221 1378887777642100
Q ss_pred --------------cc--------cccccCCEEEEcCHHHHHHHHHhC-CCCCCEEEeCCCCCCCCCCCCCchHHHHHHc
Q 036427 288 --------------PT--------WFHKLVTRCYCPTADVAKRAMKAG-LQASQIKVYGLPVRPSFVKPVRPKVELRREL 344 (536)
Q Consensus 288 --------------~~--------~~~~~~d~vi~~S~~~~~~l~~~g-~~~~ki~vignpv~~~~~~~~~~~~~~r~~l 344 (536)
.. ++....+.++++|+...+.+.+.+ ++..++.+++|+++...+.+. .+...++.+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~-~~~~~~~~~ 185 (365)
T cd03825 107 GNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPR-DKREARKRL 185 (365)
T ss_pred CCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCC-cHHHHHHHh
Confidence 00 011345678899999988887764 677899999999998876543 345667788
Q ss_pred CCCCCCCEEEEecCCCC--CCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChh---h
Q 036427 345 GMDEDLPAVLLMGGGEG--MGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVS---K 419 (536)
Q Consensus 345 gi~~~~~~il~~gg~~g--~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~---~ 419 (536)
+++++.+++++.++... .++...+++++.....+ ..++.. ++++|.++..... ....++.+.|+++ +
T Consensus 186 ~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~---~~~~~~-~~i~G~~~~~~~~----~~~~~v~~~g~~~~~~~ 257 (365)
T cd03825 186 GLPADKKIILFGAVGGTDPRKGFDELIEALKRLAER---WKDDIE-LVVFGASDPEIPP----DLPFPVHYLGSLNDDES 257 (365)
T ss_pred CCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhc---cCCCeE-EEEeCCCchhhhc----cCCCceEecCCcCCHHH
Confidence 88877776655555444 56677777766543220 124555 4566776532211 3456899999986 6
Q ss_pred HHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCH
Q 036427 420 MEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKI 493 (536)
Q Consensus 420 l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~ 493 (536)
+..+|+.||++++|| | |.+++|||++|+|||+++.++..+. +.+.+.|.++. |++++++++.++++ ++
T Consensus 258 ~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~-----~~~~~~g~~~~~~~~~~~~~~l~~l~~-~~ 331 (365)
T cd03825 258 LALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDI-----VDHGVTGYLAKPGDPEDLAEGIEWLLA-DP 331 (365)
T ss_pred HHHHHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhh-----eeCCCceEEeCCCCHHHHHHHHHHHHh-CH
Confidence 889999999999998 3 8999999999999999987554442 33334676665 89999999999999 99
Q ss_pred HHHHHHHHHHHHhcC-CchHHHHHHHHHHHHhh
Q 036427 494 DELKAMSQNALKLAR-PDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 494 ~~~~~m~~~a~~~a~-~~~~~~i~~~i~~l~~~ 525 (536)
+.+.+|++++++.+. .++++++++.+.++++.
T Consensus 332 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 332 DEREELGEAARELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999999999874 58999999999988753
No 29
>PRK14099 glycogen synthase; Provisional
Probab=99.93 E-value=2.4e-23 Score=223.72 Aligned_cols=265 Identities=15% Similarity=0.137 Sum_probs=187.3
Q ss_pred hhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc--c----------------------------cccccc
Q 036427 244 KYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC--H----------------------------PTWFHK 293 (536)
Q Consensus 244 ~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~--~----------------------------~~~~~~ 293 (536)
+++|||||+|......+|..+ +.... .++|.+..+|+.... . -++..+
T Consensus 131 ~~~pDIiH~Hdw~~~l~~~~l-~~~~~-~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 131 GFVPDIVHAHDWQAGLAPAYL-HYSGR-PAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCCCCEEEECCcHHHHHHHHH-HhCCC-CCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 579999999984333334333 32221 247888777764310 0 012346
Q ss_pred cCCEEEEcCHHHHHHHHHh----CC------CCCCEEEeCCCCCCCCCCCCCc------------------hHHHHHHcC
Q 036427 294 LVTRCYCPTADVAKRAMKA----GL------QASQIKVYGLPVRPSFVKPVRP------------------KVELRRELG 345 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~----g~------~~~ki~vignpv~~~~~~~~~~------------------~~~~r~~lg 345 (536)
.+|.++++|+..++.+... |+ ++.++.+++|++|.+.+.+..+ +..+++++|
T Consensus 209 ~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~g 288 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFG 288 (485)
T ss_pred hcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcC
Confidence 8899999999999988752 22 3678999999999887765432 246788899
Q ss_pred CCC--CCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcC--CCCCCE-EEecChhh
Q 036427 346 MDE--DLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLST--DWKIPV-QVKGFVSK 419 (536)
Q Consensus 346 i~~--~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~--~~~~~V-~~~G~v~~ 419 (536)
++. +.++++++|+....|++..+++++..... .++++ ++.|.++ ++.+.++++ ....++ .++|+.++
T Consensus 289 l~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~------~~~~l-vivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~ 361 (485)
T PRK14099 289 LDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG------EGAQL-ALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEA 361 (485)
T ss_pred CCcccCCcEEEEEecCCccccHHHHHHHHHHHHh------cCcEE-EEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHH
Confidence 974 46677788888888888888887765442 34655 4556654 233333322 123455 78999889
Q ss_pred HHHHHh-hcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC---------CceeecC--CHHHHHH
Q 036427 420 MEEAMG-ACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN---------GCGKFSK--SPKEIAN 483 (536)
Q Consensus 420 l~~ll~-~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~---------g~g~~~~--d~~~La~ 483 (536)
+..+|. .||++++|| | |++.+|||+||+|+|+++.++..+. +.+. +.|++++ |+++|++
T Consensus 362 l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~-----V~~~~~~~~~~~~~~G~l~~~~d~~~La~ 436 (485)
T PRK14099 362 LAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADT-----VVDANEMAIATGVATGVQFSPVTADALAA 436 (485)
T ss_pred HHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccce-----eecccccccccCCCceEEeCCCCHHHHHH
Confidence 999874 699999998 4 8999999999988888886554442 2222 4677765 8999999
Q ss_pred HHHH---HhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 484 MVSQ---WFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 484 ~I~~---ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
+|.+ +++ |++.+++|+++++ .+.++|+++++++++++++
T Consensus 437 ai~~a~~l~~-d~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~ 478 (485)
T PRK14099 437 ALRKTAALFA-DPVAWRRLQRNGM--TTDVSWRNPAQHYAALYRS 478 (485)
T ss_pred HHHHHHHHhc-CHHHHHHHHHHhh--hhcCChHHHHHHHHHHHHH
Confidence 9986 778 8999999999986 3679999999999887765
No 30
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.93 E-value=5.5e-23 Score=211.55 Aligned_cols=335 Identities=15% Similarity=0.140 Sum_probs=221.5
Q ss_pred eEEEEeCC--CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccccc
Q 036427 146 KVLILMSD--TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 146 KIL~~~~~--~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 223 (536)
||+|++.. ..||..+.+..|+++|.+. |++|.+................ ........
T Consensus 1 kI~~v~~~~~~~gG~~~~~~~l~~~L~~~---g~~v~v~~~~~~~~~~~~~~~~---------~~~~~~~~--------- 59 (366)
T cd03822 1 RIALVSPYPPRKCGIATFTTDLVNALSAR---GPDVLVVSVAALYPSLLYGGEQ---------EVVRVIVL--------- 59 (366)
T ss_pred CeEEecCCCCCCCcHHHHHHHHHHHhhhc---CCeEEEEEeecccCcccCCCcc---------cceeeeec---------
Confidence 78998744 2489999999999999998 7777665432221111000000 00000000
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcc--cchHHHHHHHHcCCCCCceEEEEecCCCCcc--------cccccc
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPL--MQHVPLRILRAKGLLKKIVFTTVITDLSTCH--------PTWFHK 293 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~--~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~--------~~~~~~ 293 (536)
........+.+.+++.+||+||++... ................++|++...|+..... .+.+.+
T Consensus 60 ------~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~ 133 (366)
T cd03822 60 ------DNPLDYRRAARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPGDRALLRLLLR 133 (366)
T ss_pred ------CCchhHHHHHHHHhhcCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccchhhhHHHHHHHh
Confidence 011122355677889999999987621 1111111111110112488888887751111 123457
Q ss_pred cCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHH
Q 036427 294 LVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALG 373 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~ 373 (536)
.+|.++++|....+.+..... +.++.+++++++...+...... +......+.++++++|+....++...+++++.
T Consensus 134 ~~d~ii~~s~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~ 208 (366)
T cd03822 134 RADAVIVMSSELLRALLLRAY-PEKIAVIPHGVPDPPAEPPESL----KALGGLDGRPVLLTFGLLRPYKGLELLLEALP 208 (366)
T ss_pred cCCEEEEeeHHHHHHHHhhcC-CCcEEEeCCCCcCcccCCchhh----HhhcCCCCCeEEEEEeeccCCCCHHHHHHHHH
Confidence 899999996444444333222 4789999999987665433211 33344556678888888777788887777776
Q ss_pred HHhhhcccCCCCcEEEEEecCCH-HHHH-------HHHcCCCCCCEEEecC-h--hhHHHHHhhcCeEEECC-----C-h
Q 036427 374 NALYDENLGEPIGQVLVICGRNK-KLAN-------KLLSTDWKIPVQVKGF-V--SKMEEAMGACDCIITKA-----G-P 436 (536)
Q Consensus 374 ~~l~~~~~~~~~~~~lvi~G~~~-~l~~-------~l~~~~~~~~V~~~G~-v--~~l~~ll~~aDv~V~~s-----G-~ 436 (536)
+... ..++++++ ++|.+. +... .+++.+...+|++.|. + +++.++|+.||++++|+ | +
T Consensus 209 ~~~~----~~~~~~l~-i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~ 283 (366)
T cd03822 209 LLVA----KHPDVRLL-VAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQS 283 (366)
T ss_pred HHHh----hCCCeEEE-EeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccc
Confidence 5443 24567654 456543 1111 1566778889999986 5 58999999999999986 3 7
Q ss_pred HHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHH
Q 036427 437 GTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFR 514 (536)
Q Consensus 437 ~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~ 514 (536)
++++|||++|+|||+++.++ .+ .+.+.+.|.+++ |+++++++|..+++ +++.+.+|+++++++++++++++
T Consensus 284 ~~~~Ea~a~G~PvI~~~~~~-~~-----~i~~~~~g~~~~~~d~~~~~~~l~~l~~-~~~~~~~~~~~~~~~~~~~s~~~ 356 (366)
T cd03822 284 GVLAYAIGFGKPVISTPVGH-AE-----EVLDGGTGLLVPPGDPAALAEAIRRLLA-DPELAQALRARAREYARAMSWER 356 (366)
T ss_pred hHHHHHHHcCCCEEecCCCC-hh-----eeeeCCCcEEEcCCCHHHHHHHHHHHHc-ChHHHHHHHHHHHHHHhhCCHHH
Confidence 89999999999999999755 33 256667777764 79999999999999 99999999999999998899999
Q ss_pred HHHHHHHHHh
Q 036427 515 IVQDLHELVR 524 (536)
Q Consensus 515 i~~~i~~l~~ 524 (536)
+++.+.++++
T Consensus 357 ~~~~~~~~~~ 366 (366)
T cd03822 357 VAERYLRLLA 366 (366)
T ss_pred HHHHHHHHhC
Confidence 9999998763
No 31
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.93 E-value=5.7e-23 Score=209.34 Aligned_cols=343 Identities=18% Similarity=0.177 Sum_probs=234.1
Q ss_pred eEEEEeCC---CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 146 KVLILMSD---TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 146 KIL~~~~~---~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
||++++.. .+||+...+..|++.|.+. |++|.++................. .... ...
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~---g~~v~i~~~~~~~~~~~~~~~~~~---~~~~-~~~------------ 61 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAAR---GHEVTVLTPGDGGLPDEEEVGGIV---VVRP-PPL------------ 61 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhc---CceEEEEecCCCCCCceeeecCcc---eecC-Ccc------------
Confidence 68888743 2489999999999999987 788877654332111000000000 0000 000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc---------------
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH--------------- 287 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~--------------- 287 (536)
...............+.+++++.+||+|+++.+..........+.. ++|++...++.....
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~----~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~ 137 (374)
T cd03801 62 LRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAARLL----GIPLVLTVHGLEFGRPGNELGLLLKLARAL 137 (374)
T ss_pred cccchhHHHHHHHHHHHHHhhhcCCcEEEEechhHHHHHHHHHHhc----CCcEEEEeccchhhccccchhHHHHHHHHH
Confidence 0000111233344567778889999999999876543333223322 388887777654211
Q ss_pred cccccccCCEEEEcCHHHHHHHHHhCC-CCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHH
Q 036427 288 PTWFHKLVTRCYCPTADVAKRAMKAGL-QASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIE 366 (536)
Q Consensus 288 ~~~~~~~~d~vi~~S~~~~~~l~~~g~-~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~ 366 (536)
..+..+.+|.+++.|+...+.+.+.+. ++.++.+++++++...+.+.. ...+.......+.+.++++|+....++..
T Consensus 138 ~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~g~~~~~k~~~ 215 (374)
T cd03801 138 ERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAP--RAARRRLGIPEDEPVILFVGRLVPRKGVD 215 (374)
T ss_pred HHHHHHhCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccCccc--hHHHhhcCCcCCCeEEEEecchhhhcCHH
Confidence 134567889999999999999988653 346899999999887665432 33344444556667788888877777777
Q ss_pred HHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hH
Q 036427 367 ATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PG 437 (536)
Q Consensus 367 ~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~ 437 (536)
.+++++..... ..+++++ ++.|.+. .+.+.+++.+...+|.+.|++ +++.++|+.||+++.++ | |+
T Consensus 216 ~~i~~~~~~~~----~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~ 290 (374)
T cd03801 216 LLLEALAKLRK----EYPDVRL-VIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGL 290 (374)
T ss_pred HHHHHHHHHhh----hcCCeEE-EEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchhccccc
Confidence 77776655432 2355665 4556554 233344456677899999999 79999999999999987 3 89
Q ss_pred HHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHH-HhcCCchHHH
Q 036427 438 TIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNAL-KLARPDAVFR 514 (536)
Q Consensus 438 tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~-~~a~~~~~~~ 514 (536)
+++|||++|+|||+++.++..+ .+.+.+.|.+++ |+++++++|.++++ +++.+++|+++++ ...+.+++++
T Consensus 291 ~~~Ea~~~g~pvI~~~~~~~~~-----~~~~~~~g~~~~~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 364 (374)
T cd03801 291 VLLEAMAAGLPVVASDVGGIPE-----VVEDGETGLLVPPGDPEALAEAILRLLD-DPELRRRLGEAARERVAERFSWDR 364 (374)
T ss_pred hHHHHHHcCCcEEEeCCCChhH-----HhcCCcceEEeCCCCHHHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHhcCHHH
Confidence 9999999999999998644333 244456677765 68999999999999 9999999999998 4567799999
Q ss_pred HHHHHHHHHh
Q 036427 515 IVQDLHELVR 524 (536)
Q Consensus 515 i~~~i~~l~~ 524 (536)
+++.+.++++
T Consensus 365 ~~~~~~~~~~ 374 (374)
T cd03801 365 VAARTEEVYY 374 (374)
T ss_pred HHHHHHHhhC
Confidence 9999988763
No 32
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.93 E-value=2.8e-23 Score=215.26 Aligned_cols=261 Identities=15% Similarity=0.171 Sum_probs=194.3
Q ss_pred HHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC-ccc---------------ccccccCCEEE
Q 036427 236 REVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST-CHP---------------TWFHKLVTRCY 299 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-~~~---------------~~~~~~~d~vi 299 (536)
..+.+++++.+||+||++........+.+++..| +|++...|+... ... +.+.+.+|.++
T Consensus 72 ~~~~~~~~~~~~dvvh~~~~~~~~~~~~~~~~~~----~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii 147 (367)
T cd05844 72 PQLRRLLRRHRPDLVHAHFGFDGVYALPLARRLG----VPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFI 147 (367)
T ss_pred cHHHHHHHhhCCCEEEeccCchHHHHHHHHHHcC----CCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEE
Confidence 3555578899999999987654333344455555 788765553221 000 12346789999
Q ss_pred EcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhc
Q 036427 300 CPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDE 379 (536)
Q Consensus 300 ~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~ 379 (536)
++|+..++.+.+.++++.++.+++|+++.+.+.+... ..+.+.++++|+....|+...+++++.....
T Consensus 148 ~~s~~~~~~~~~~~~~~~~i~vi~~g~d~~~~~~~~~----------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~-- 215 (367)
T cd05844 148 AVSQFIRDRLLALGFPPEKVHVHPIGVDTAKFTPATP----------ARRPPRILFVGRFVEKKGPLLLLEAFARLAR-- 215 (367)
T ss_pred ECCHHHHHHHHHcCCCHHHeEEecCCCCHHhcCCCCC----------CCCCcEEEEEEeeccccChHHHHHHHHHHHH--
Confidence 9999999999988888889999999998766543211 1345678888887777777777777765433
Q ss_pred ccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---------C-hHHHHHHHH
Q 036427 380 NLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---------G-PGTIAEAMI 444 (536)
Q Consensus 380 ~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---------G-~~tllEAma 444 (536)
..+++++ +++|.++ ++.+..++++...+|+|.|++ +++.++|+.||++|+|| | |++++|||+
T Consensus 216 --~~~~~~l-~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a 292 (367)
T cd05844 216 --RVPEVRL-VIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQA 292 (367)
T ss_pred --hCCCeEE-EEEeCchHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHH
Confidence 2456664 5567665 344455566677899999998 58999999999999986 2 799999999
Q ss_pred hCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHH
Q 036427 445 RGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQDLHE 521 (536)
Q Consensus 445 ~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~ 521 (536)
+|+|||+++..+..+ .+.+.+.|.+++ |+++++++|.++++ +++.+++|+.++++.+ +.++++.+++.+.+
T Consensus 293 ~G~PvI~s~~~~~~e-----~i~~~~~g~~~~~~d~~~l~~~i~~l~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 293 SGVPVVATRHGGIPE-----AVEDGETGLLVPEGDVAALAAALGRLLA-DPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred cCCCEEEeCCCCchh-----heecCCeeEEECCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 999999999755433 245556777774 89999999999999 9999999999999987 56899999888765
No 33
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.93 E-value=3.9e-23 Score=216.19 Aligned_cols=350 Identities=16% Similarity=0.141 Sum_probs=209.2
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec-ccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL-WSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~-~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
+|||+|.++++ |||...+. ++++|++. +++++++.... .-.....+. ..+ .+. .....++.
T Consensus 1 ~~ki~i~~Ggt-~G~i~~a~-l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~-~~~-~~~--l~~~g~~~----------- 62 (380)
T PRK00025 1 PLRIAIVAGEV-SGDLLGAG-LIRALKAR-APNLEFVGVGGPRMQAAGCES-LFD-MEE--LAVMGLVE----------- 62 (380)
T ss_pred CceEEEEecCc-CHHHHHHH-HHHHHHhc-CCCcEEEEEccHHHHhCCCcc-ccC-HHH--hhhccHHH-----------
Confidence 57999999999 79999999 99999986 33444443221 101111110 010 000 00000000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCC-Cccc---ccccccCCE
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLS-TCHP---TWFHKLVTR 297 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~-~~~~---~~~~~~~d~ 297 (536)
.............++.+++++++||+||+++....... +..++..| +|++.+.+... .... +.+.+.+|.
T Consensus 63 -~~~~~~~~~~~~~~~~~~l~~~kPdivi~~~~~~~~~~~a~~a~~~~----ip~i~~~~~~~~~~~~~~~~~~~~~~d~ 137 (380)
T PRK00025 63 -VLPRLPRLLKIRRRLKRRLLAEPPDVFIGIDAPDFNLRLEKKLRKAG----IPTIHYVSPSVWAWRQGRAFKIAKATDH 137 (380)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHCC----CCEEEEeCCchhhcCchHHHHHHHHHhh
Confidence 00001122334567888999999999999763211111 22234444 89876655321 0111 234567899
Q ss_pred EEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhh
Q 036427 298 CYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALY 377 (536)
Q Consensus 298 vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~ 377 (536)
+++.++...+.+.+.|.+ +.++|||+.+..... ..+...+++++++++.+++++++|+.+.. ....+..+.+++.
T Consensus 138 i~~~~~~~~~~~~~~g~~---~~~~G~p~~~~~~~~-~~~~~~~~~l~~~~~~~~il~~~gsr~~~-~~~~~~~l~~a~~ 212 (380)
T PRK00025 138 VLALFPFEAAFYDKLGVP---VTFVGHPLADAIPLL-PDRAAARARLGLDPDARVLALLPGSRGQE-IKRLLPPFLKAAQ 212 (380)
T ss_pred heeCCccCHHHHHhcCCC---eEEECcCHHHhcccc-cChHHHHHHcCCCCCCCEEEEECCCCHHH-HHHHHHHHHHHHH
Confidence 999999998888877754 889999987653322 23456788899988888877777765432 1122222222221
Q ss_pred hcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEecc
Q 036427 378 DENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 378 ~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~ 454 (536)
......++.++++++|.+. ++.+.+++.+ ..++.+.. +++.++|+.||++|++||..+ +|||++|+|+|+++.
T Consensus 213 ~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~-~~~v~~~~--~~~~~~~~~aDl~v~~sG~~~-lEa~a~G~PvI~~~~ 288 (380)
T PRK00025 213 LLQQRYPDLRFVLPLVNPKRREQIEEALAEYA-GLEVTLLD--GQKREAMAAADAALAASGTVT-LELALLKVPMVVGYK 288 (380)
T ss_pred HHHHhCCCeEEEEecCChhhHHHHHHHHhhcC-CCCeEEEc--ccHHHHHHhCCEEEECccHHH-HHHHHhCCCEEEEEc
Confidence 1111245677666655333 2333343330 22355543 589999999999999987555 599999999999965
Q ss_pred CCccccCC------------hhhHhhCCce--eecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHH---hcCCchHHHH
Q 036427 455 IAGQEAGN------------VPYVVENGCG--KFSK--SPKEIANMVSQWFGPKIDELKAMSQNALK---LARPDAVFRI 515 (536)
Q Consensus 455 ~~~~e~~n------------a~~lv~~g~g--~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~---~a~~~~~~~i 515 (536)
.+...... +..+.+.+.+ ...+ |++.+++.+.++++ |++.+++|++++.+ .....+.+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~a~~~~ 367 (380)
T PRK00025 289 VSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLA-DGARRQALLEGFTELHQQLRCGADERA 367 (380)
T ss_pred cCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 32211001 1112222211 1222 78999999999999 99999999998632 2266799999
Q ss_pred HHHHHHHHhhc
Q 036427 516 VQDLHELVRQR 526 (536)
Q Consensus 516 ~~~i~~l~~~~ 526 (536)
++.|.+++.++
T Consensus 368 ~~~i~~~~~~~ 378 (380)
T PRK00025 368 AQAVLELLKQR 378 (380)
T ss_pred HHHHHHHhhhc
Confidence 99999887654
No 34
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.93 E-value=5.5e-23 Score=226.57 Aligned_cols=277 Identities=10% Similarity=0.042 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEE-EecCCCCc-cc-c----------cc-cccCCE
Q 036427 232 TFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTT-VITDLSTC-HP-T----------WF-HKLVTR 297 (536)
Q Consensus 232 ~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~-~~~d~~~~-~~-~----------~~-~~~~d~ 297 (536)
....+++.+++++++|||||++......+...+.+..+ +|++. ..+.+... .. . ++ ....+.
T Consensus 386 ~~~~~~L~~~lk~~kpDIVH~h~~~a~~lg~lAa~~~g----vPvIv~t~h~~~~~~~~~~~~~~~~~l~~~l~~~~~~i 461 (694)
T PRK15179 386 IEGTTKLTDVMRSSVPSVVHIWQDGSIFACALAALLAG----VPRIVLSVRTMPPVDRPDRYRVEYDIIYSELLKMRGVA 461 (694)
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHHcC----CCEEEEEeCCCccccchhHHHHHHHHHHHHHHhcCCeE
Confidence 34457889999999999999987654333333334333 67653 33332110 10 0 11 112345
Q ss_pred EEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCCchHHHHHH--cCCCCCCCEEEEecCCCCCCcHHHHHHHHHH
Q 036427 298 CYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVRPKVELRRE--LGMDEDLPAVLLMGGGEGMGPIEATARALGN 374 (536)
Q Consensus 298 vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~--lgi~~~~~~il~~gg~~g~k~~~~~l~al~~ 374 (536)
+++.|...++.+.+ ++++++++.+++|+++...+.+.......+.. ...+.+.++|+++|+....|+...+++++.+
T Consensus 462 ~Vs~S~~~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~ 541 (694)
T PRK15179 462 LSSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQR 541 (694)
T ss_pred EEeCcHHHHHHHHHHcCCChhHEEEECCCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHH
Confidence 66778888777665 58888999999999987766432211111222 2234455678888888888888888888876
Q ss_pred HhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhCC
Q 036427 375 ALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRGL 447 (536)
Q Consensus 375 ~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~Gl 447 (536)
..+ ..+++++ +++|.++ ++.+.+++.++.++|+|+|+.+++..+|+.||++|++| | |++++|||+||+
T Consensus 542 l~~----~~p~~~L-vIvG~G~~~~~L~~l~~~lgL~~~V~flG~~~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~ 616 (694)
T PRK15179 542 FAA----SHPKVRF-IMVGGGPLLESVREFAQRLGMGERILFTGLSRRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGV 616 (694)
T ss_pred HHH----HCcCeEE-EEEccCcchHHHHHHHHHcCCCCcEEEcCCcchHHHHHHhcCEEEeccccccchHHHHHHHHcCC
Confidence 554 2467765 4556654 45666777888899999999999999999999999998 4 899999999999
Q ss_pred cEEEeccCCccccCChhhHhhCC-ceeecC--C--HHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHH
Q 036427 448 PIILNDFIAGQEAGNVPYVVENG-CGKFSK--S--PKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQDLHE 521 (536)
Q Consensus 448 PVI~~~~~~~~e~~na~~lv~~g-~g~~~~--d--~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~ 521 (536)
|||+++.++..| ++.+| .|++++ | +++++++|.+++. +......+++++++.+ +.++++++++.+.+
T Consensus 617 PVVat~~gG~~E------iV~dg~~GlLv~~~d~~~~~La~aL~~ll~-~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~ 689 (694)
T PRK15179 617 PVVTTLAGGAGE------AVQEGVTGLTLPADTVTAPDVAEALARIHD-MCAADPGIARKAADWASARFSLNQMIASTVR 689 (694)
T ss_pred eEEEECCCChHH------HccCCCCEEEeCCCCCChHHHHHHHHHHHh-ChhccHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999754333 55444 677775 3 5688888888887 6665667888888877 46999999999998
Q ss_pred HHh
Q 036427 522 LVR 524 (536)
Q Consensus 522 l~~ 524 (536)
+++
T Consensus 690 lY~ 692 (694)
T PRK15179 690 CYQ 692 (694)
T ss_pred HhC
Confidence 874
No 35
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.93 E-value=6.7e-23 Score=216.67 Aligned_cols=275 Identities=12% Similarity=0.063 Sum_probs=195.9
Q ss_pred HHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEE-ecCCCCcc------cc--------cccccCCEEE
Q 036427 235 AREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTV-ITDLSTCH------PT--------WFHKLVTRCY 299 (536)
Q Consensus 235 ~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~-~~d~~~~~------~~--------~~~~~~d~vi 299 (536)
...+..++++.+||+||++...........++..| +|++.. .+.+.... .. ++.+.+| ++
T Consensus 269 ~~~l~~~ir~~rpDIVHt~~~~a~l~g~laA~lag----vpviv~~~h~~~~~~~~r~~~~e~~~~~~a~~i~~~sd-~v 343 (578)
T PRK15490 269 IKHLVPHLCERKLDYLSVWQDGACLMIALAALIAG----VPRIQLGLRGLPPVVRKRLFKPEYEPLYQALAVVPGVD-FM 343 (578)
T ss_pred HHHHHHHHHHcCCCEEEEcCcccHHHHHHHHHhcC----CCEEEEeecccCCcchhhHHHHHHHHhhhhceeEecch-hh
Confidence 45788899999999999987554333344445455 677532 22211100 11 1133344 56
Q ss_pred EcCHHHHHHHHHh-CCCCCCEEEeCCCCCCCCCCCCCch-HHHHHH--cCCCCCCCEEEEecCCCCCCcHHHHHHHHHHH
Q 036427 300 CPTADVAKRAMKA-GLQASQIKVYGLPVRPSFVKPVRPK-VELRRE--LGMDEDLPAVLLMGGGEGMGPIEATARALGNA 375 (536)
Q Consensus 300 ~~S~~~~~~l~~~-g~~~~ki~vignpv~~~~~~~~~~~-~~~r~~--lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~ 375 (536)
+.+..+.+.+.++ +++++++.+++|+++...+.+.... ...++. .+++++.++++++|+..+.|+...++.++.+.
T Consensus 344 ~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~l 423 (578)
T PRK15490 344 SNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARY 423 (578)
T ss_pred hccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHH
Confidence 7788888877664 7899999999999998766553221 123332 34555667788889988889988888888766
Q ss_pred hhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCc
Q 036427 376 LYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRGLP 448 (536)
Q Consensus 376 l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlP 448 (536)
++ ..+++++ +++|+++ ++.+.+++.++.++|+|+|+.+++.++|+.+|++|+|| | |++++|||++|+|
T Consensus 424 lk----~~pdirL-vIVGdG~~~eeLk~la~elgL~d~V~FlG~~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlP 498 (578)
T PRK15490 424 LQ----HHPATRF-VLVGDGDLRAEAQKRAEQLGILERILFVGASRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVP 498 (578)
T ss_pred Hh----HCCCeEE-EEEeCchhHHHHHHHHHHcCCCCcEEECCChhhHHHHHHhCCEEEEcccccCccHHHHHHHHhCCC
Confidence 54 2466765 4557765 45566677788899999999999999999999999998 4 8999999999999
Q ss_pred EEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHH---HHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHH
Q 036427 449 IILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMV---SQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQDLHEL 522 (536)
Q Consensus 449 VI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I---~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~l 522 (536)
||+++.++..+ .+.+...|++++ |++++++++ ..+.+ ..+.+..|+++|++++ ..++++++++.+.++
T Consensus 499 VVATdvGG~~E-----iV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~-ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki 572 (578)
T PRK15490 499 VISTPAGGSAE-----CFIEGVSGFILDDAQTVNLDQACRYAEKLVN-LWRSRTGICQQTQSFLQERFTVEHMVGTFVKT 572 (578)
T ss_pred EEEeCCCCcHH-----HcccCCcEEEECCCChhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 99999755443 244555677765 666777665 44555 5555667999999987 459999999999999
Q ss_pred Hhh
Q 036427 523 VRQ 525 (536)
Q Consensus 523 ~~~ 525 (536)
++.
T Consensus 573 ~~~ 575 (578)
T PRK15490 573 IAS 575 (578)
T ss_pred HHh
Confidence 875
No 36
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.93 E-value=3.7e-23 Score=215.81 Aligned_cols=342 Identities=13% Similarity=0.134 Sum_probs=217.8
Q ss_pred eEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 146 KVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 146 KIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
||++++.. .+||.++.+.++++.|.+. |++|.+......... +. ............+. .. . .
T Consensus 1 ki~~~~~~~~~GGv~~~~~~l~~~l~~~---g~~v~~~~~~~~~~~--~~-~~~~~~~~~~g~~~-----~~-----~-~ 63 (372)
T cd03792 1 KVLHVNSTPYGGGVAEILHSLVPLMRDL---GVDTRWEVIKGDPEF--FN-VTKKFHNALQGADI-----EL-----S-E 63 (372)
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHHc---CCCceEEecCCChhH--HH-HHHHhhHhhcCCCC-----CC-----C-H
Confidence 68888754 4589999999999999998 666655432111000 00 00000000011100 00 0 0
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCCCccc------ccccccCCE
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLSTCHP------TWFHKLVTR 297 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~~~~------~~~~~~~d~ 297 (536)
.............+.+.+.+.+||+||++.+....+ ..+++.. ++|++...| +...... +++.+.+|.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~Dvv~~h~~~~~~~--~~~~~~~---~~~~i~~~H~~~~~~~~~~~~~~~~~~~~~d~ 138 (372)
T cd03792 64 EEKEIYLEWNEENAERPLLDLDADVVVIHDPQPLAL--PLFKKKR---GRPWIWRCHIDLSSPNRRVWDFLQPYIEDYDA 138 (372)
T ss_pred HHHHHHHHHHHHHhccccccCCCCEEEECCCCchhH--HHhhhcC---CCeEEEEeeeecCCCcHHHHHHHHHHHHhCCE
Confidence 000000000001111134577999999998764332 2222221 377764433 3321111 223456888
Q ss_pred EEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCC--CC--CchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHH
Q 036427 298 CYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVK--PV--RPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALG 373 (536)
Q Consensus 298 vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~--~~--~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~ 373 (536)
+++.++. +...+++..++ +++|++++.... .. ......+++++++++.++++++|+....|+...+++++.
T Consensus 139 ~i~~~~~----~~~~~~~~~~~-vipngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~ 213 (372)
T cd03792 139 AVFHLPE----YVPPQVPPRKV-IIPPSIDPLSGKNRELSPADIEYILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYR 213 (372)
T ss_pred EeecHHH----hcCCCCCCceE-EeCCCCCCCccccCCCCHHHHHHHHHHhCCCCCCcEEEEEeccccccCcHHHHHHHH
Confidence 8887733 23345665555 999999875311 11 123456778999888999999999888888888888776
Q ss_pred HHhhhcccCCCCcEEEEEecCCH-------HHHHHHH-cCCCCCCEEEecCh----hhHHHHHhhcCeEEECC---C-hH
Q 036427 374 NALYDENLGEPIGQVLVICGRNK-------KLANKLL-STDWKIPVQVKGFV----SKMEEAMGACDCIITKA---G-PG 437 (536)
Q Consensus 374 ~~l~~~~~~~~~~~~lvi~G~~~-------~l~~~l~-~~~~~~~V~~~G~v----~~l~~ll~~aDv~V~~s---G-~~ 437 (536)
.... ..++++++ ++|.++ +..+.+. ..+..++|.+.|+. +++.++|+.||++++|| | |+
T Consensus 214 ~l~~----~~~~~~l~-i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~ 288 (372)
T cd03792 214 KVKE----RVPDPQLV-LVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGL 288 (372)
T ss_pred HHHh----hCCCCEEE-EEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCH
Confidence 5443 23567654 456542 1222322 34566789999886 58899999999999998 4 89
Q ss_pred HHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHH
Q 036427 438 TIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIV 516 (536)
Q Consensus 438 tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~ 516 (536)
+++|||+||+|||+++.++..+ .+.+...|.+++++++++.+|.++++ +++.+++|++++++.+ +.++++.++
T Consensus 289 ~~lEA~a~G~Pvv~s~~~~~~~-----~i~~~~~g~~~~~~~~~a~~i~~ll~-~~~~~~~~~~~a~~~~~~~~s~~~~~ 362 (372)
T cd03792 289 TVTEALWKGKPVIAGPVGGIPL-----QIEDGETGFLVDTVEEAAVRILYLLR-DPELRRKMGANAREHVRENFLITRHL 362 (372)
T ss_pred HHHHHHHcCCCEEEcCCCCchh-----hcccCCceEEeCCcHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 9999999999999998655333 24455567777888999999999999 9999999999999976 569999999
Q ss_pred HHHHHHHhh
Q 036427 517 QDLHELVRQ 525 (536)
Q Consensus 517 ~~i~~l~~~ 525 (536)
+.+.++++.
T Consensus 363 ~~~~~~~~~ 371 (372)
T cd03792 363 KDYLYLISK 371 (372)
T ss_pred HHHHHHHHh
Confidence 999988764
No 37
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.93 E-value=8.9e-23 Score=207.88 Aligned_cols=331 Identities=18% Similarity=0.160 Sum_probs=221.5
Q ss_pred eEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCC-CCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTP-WPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 146 KIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~-~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
||++++... ||+......+++.|.+. |++|.++........ .....+ ..... .... ..
T Consensus 1 kIl~i~~~~-~g~~~~~~~l~~~L~~~---g~~v~~~~~~~~~~~~~~~~~~-----------~~~~~--~~~~-~~--- 59 (359)
T cd03808 1 KILHIVTVD-GGLYSFRLPLIKALRAA---GYEVHVVAPPGDELEELEALGV-----------KVIPI--PLDR-RG--- 59 (359)
T ss_pred CeeEEEecc-hhHHHHHHHHHHHHHhc---CCeeEEEecCCCcccccccCCc-----------eEEec--cccc-cc---
Confidence 689998874 89999999999999888 788877754332111 000000 00000 0000 00
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc-------------cccc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH-------------PTWF 291 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~-------------~~~~ 291 (536)
............+.+++++.+||+|+++............+..+ ..+++...++..... .++.
T Consensus 60 -~~~~~~~~~~~~~~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (359)
T cd03808 60 -INPFKDLKALLRLYRLLRKERPDIVHTHTPKPGILGRLAARLAG---VPKVIYTVHGLGFVFTSGGLKRRLYLLLERLA 135 (359)
T ss_pred -cChHhHHHHHHHHHHHHHhcCCCEEEEccccchhHHHHHHHHcC---CCCEEEEecCcchhhccchhHHHHHHHHHHHH
Confidence 00011222345677889999999999986544322222223222 245555555432110 1345
Q ss_pred cccCCEEEEcCHHHHHHHHHhCCC--CCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHH
Q 036427 292 HKLVTRCYCPTADVAKRAMKAGLQ--ASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATA 369 (536)
Q Consensus 292 ~~~~d~vi~~S~~~~~~l~~~g~~--~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l 369 (536)
.+.+|.+++.|+...+.+.+.+.. ..++.+.+++++...+.+.... ...+.+.++++|+....++...++
T Consensus 136 ~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~i~~~G~~~~~k~~~~li 207 (359)
T cd03808 136 LRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEP--------IPEDDPVFLFVARLLKDKGIDELL 207 (359)
T ss_pred HhhccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccc--------cCCCCcEEEEEeccccccCHHHHH
Confidence 567899999999999999887654 4567778888887665433211 134567788888877777777777
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecCCH-H--HHHH-HHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHH
Q 036427 370 RALGNALYDENLGEPIGQVLVICGRNK-K--LANK-LLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAE 441 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~~~-~--l~~~-l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllE 441 (536)
+++..... ..++++++ ++|.+. + .... +.+.....+|.+.|+.+++.++|+.||++++|+ | |++++|
T Consensus 208 ~~~~~l~~----~~~~~~l~-i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~i~ps~~e~~~~~~~E 282 (359)
T cd03808 208 EAARILKA----KGPNVRLL-LVGDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAADVFVLPSYREGLPRVLLE 282 (359)
T ss_pred HHHHHHHh----cCCCeEEE-EEcCCCcchhhHHHHHHhcCCcceEEEeeccccHHHHHHhccEEEecCcccCcchHHHH
Confidence 66654432 24667654 446554 1 1111 455566779999999999999999999999998 3 899999
Q ss_pred HHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHh-cCCchHHHHHHH
Q 036427 442 AMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKL-ARPDAVFRIVQD 518 (536)
Q Consensus 442 Ama~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~-a~~~~~~~i~~~ 518 (536)
||++|+|||+++.++..+ .+.+.+.|.+++ |+++++++|.+++. +++.++++++++++. ...++++.+++.
T Consensus 283 a~~~G~Pvi~s~~~~~~~-----~i~~~~~g~~~~~~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 356 (359)
T cd03808 283 AMAMGRPVIATDVPGCRE-----AVIDGVNGFLVPPGDAEALADAIERLIE-DPELRARMGQAARKRAEEEFDEEIVVKK 356 (359)
T ss_pred HHHcCCCEEEecCCCchh-----hhhcCcceEEECCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 999999999998655433 244456677765 79999999999999 999999999999998 677899988887
Q ss_pred HH
Q 036427 519 LH 520 (536)
Q Consensus 519 i~ 520 (536)
+.
T Consensus 357 ~~ 358 (359)
T cd03808 357 LL 358 (359)
T ss_pred hh
Confidence 65
No 38
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.92 E-value=6.2e-23 Score=215.05 Aligned_cols=348 Identities=13% Similarity=0.009 Sum_probs=215.5
Q ss_pred ceEEEEeCCC-CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccccc
Q 036427 145 KKVLILMSDT-GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 145 mKIL~~~~~~-GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 223 (536)
|||||++.++ .||.++.+..||++|.++ ||+|.+++....... .+... ......+.............
T Consensus 1 mkIl~~~~~~~~gG~e~~~~~la~~L~~~---G~~V~v~~~~~~~~~-~~~~~-------~~~~~~i~~~~~~~~~~~~~ 69 (392)
T cd03805 1 LRVAFIHPDLGIGGAERLVVDAALALQSR---GHEVTIYTSHHDPSH-CFEET-------KDGTLPVRVRGDWLPRSIFG 69 (392)
T ss_pred CeEEEECCCCCCchHHHHHHHHHHHHHhC---CCeEEEEcCCCCchh-cchhc-------cCCeeEEEEEeEEEcchhhH
Confidence 7999998764 389999999999999998 788877654221100 00000 00000000000000000000
Q ss_pred c--hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC---cc-----------
Q 036427 224 Q--SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST---CH----------- 287 (536)
Q Consensus 224 ~--~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~---~~----------- 287 (536)
. .+..............+++..++|+||++.... .++ +.+... +.|++.+.+.... ..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~-~~~--~~~~~~---~~~~i~~~h~~~~~~~~~~~~~~~~~~~~ 143 (392)
T cd03805 70 RFHILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSA-CVP--LLKLFS---PSKILFYCHFPDQLLAQRGSLLKRLYRKP 143 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcch-HHH--HHHHhc---CCcEEEEEecChHHhcCCCcHHHHHHHHH
Confidence 0 000000000000111235667999999875332 222 222222 2566655442110 00
Q ss_pred ----cccccccCCEEEEcCHHHHHHHHHh-C-CCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCC
Q 036427 288 ----PTWFHKLVTRCYCPTADVAKRAMKA-G-LQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEG 361 (536)
Q Consensus 288 ----~~~~~~~~d~vi~~S~~~~~~l~~~-g-~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g 361 (536)
.++..+.+|.++++|+..++.+.+. + .+...+.+++|+++.+.+.+..... .++.....++.++++++|+...
T Consensus 144 ~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~-~~~~~~~~~~~~~i~~~grl~~ 222 (392)
T cd03805 144 FDWLEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDP-DPGLLIPKSGKKTFLSINRFER 222 (392)
T ss_pred HHHHHHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCcccccc-cccccccCCCceEEEEEeeecc
Confidence 0234678999999999999987763 2 2333445899999987665432211 2233445566777888888777
Q ss_pred CCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCC-----------HHHHHHHHc-CCCCCCEEEecChh--hHHHHHhhc
Q 036427 362 MGPIEATARALGNALYDENLGEPIGQVLVICGRN-----------KKLANKLLS-TDWKIPVQVKGFVS--KMEEAMGAC 427 (536)
Q Consensus 362 ~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~-----------~~l~~~l~~-~~~~~~V~~~G~v~--~l~~ll~~a 427 (536)
.|+...+++++.+...+ ....+++++++ +|.+ .++.+.+++ .+..++|.|+|+++ ++.++|+.|
T Consensus 223 ~Kg~~~ll~a~~~l~~~-~~~~~~~~l~i-~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l~~a 300 (392)
T cd03805 223 KKNIALAIEAFAILKDK-LAEFKNVRLVI-AGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLLSSA 300 (392)
T ss_pred cCChHHHHHHHHHHHhh-cccccCeEEEE-EcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHHhhC
Confidence 78888777777654331 00015666544 4543 234455666 67788999999984 678999999
Q ss_pred CeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHH
Q 036427 428 DCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQN 502 (536)
Q Consensus 428 Dv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~ 502 (536)
|+++++| | |.+++|||+||+|||+++.++..+. +.+.+.|.+++ |+++++++|..+++ +++.+++|+++
T Consensus 301 d~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~-----i~~~~~g~~~~~~~~~~a~~i~~l~~-~~~~~~~~~~~ 374 (392)
T cd03805 301 RALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLET-----VVDGETGFLCEPTPEEFAEAMLKLAN-DPDLADRMGAA 374 (392)
T ss_pred eEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHH-----hccCCceEEeCCCHHHHHHHHHHHHh-ChHHHHHHHHH
Confidence 9999987 3 8999999999999999997554442 44445676664 89999999999999 99999999999
Q ss_pred HHHhc-CCchHHHHHHH
Q 036427 503 ALKLA-RPDAVFRIVQD 518 (536)
Q Consensus 503 a~~~a-~~~~~~~i~~~ 518 (536)
|++.+ +.++++.+++.
T Consensus 375 a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 375 GRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHhcCHHHHhhh
Confidence 99976 55888887765
No 39
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.92 E-value=6.7e-23 Score=220.18 Aligned_cols=276 Identities=14% Similarity=0.118 Sum_probs=189.4
Q ss_pred HHHHHHHHHh--hCCCEEEEcCcccchHHHHHHHH--cCCCCCceEEEEecCCCCc--c-----------------c---
Q 036427 235 AREVAKGLMK--YQPDIIISVHPLMQHVPLRILRA--KGLLKKIVFTTVITDLSTC--H-----------------P--- 288 (536)
Q Consensus 235 ~~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~--~g~~~~ip~v~~~~d~~~~--~-----------------~--- 288 (536)
.+...+++++ .+||+||+|......++..+.+. .+ ..++|++..+|..... . .
T Consensus 105 ~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~-~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 183 (466)
T PRK00654 105 SWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRG-YPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLE 183 (466)
T ss_pred HHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhcc-CCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhh
Confidence 3444555554 48999999974333333333322 12 1248888776654210 0 0
Q ss_pred --------ccccccCCEEEEcCHHHHHHHHHh----------CCCCCCEEEeCCCCCCCCCCCCCc--------------
Q 036427 289 --------TWFHKLVTRCYCPTADVAKRAMKA----------GLQASQIKVYGLPVRPSFVKPVRP-------------- 336 (536)
Q Consensus 289 --------~~~~~~~d~vi~~S~~~~~~l~~~----------g~~~~ki~vignpv~~~~~~~~~~-------------- 336 (536)
++..+.+|.++++|+..++.+... +.+..++.+++|++|.+.+.+..+
T Consensus 184 ~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~ 263 (466)
T PRK00654 184 FYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEG 263 (466)
T ss_pred cCCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhc
Confidence 112467899999999999887642 234678999999999987765321
Q ss_pred ----hHHHHHHcCCCC-CCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcC--CCC
Q 036427 337 ----KVELRRELGMDE-DLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLST--DWK 408 (536)
Q Consensus 337 ----~~~~r~~lgi~~-~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~--~~~ 408 (536)
+..+++++|+++ +.++++++|+....|++..+++++.+... .++++++ +|.++ .+.+.++++ ...
T Consensus 264 k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~------~~~~lvi-vG~g~~~~~~~l~~l~~~~~ 336 (466)
T PRK00654 264 KAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLE------QGGQLVL-LGTGDPELEEAFRALAARYP 336 (466)
T ss_pred hHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHh------cCCEEEE-EecCcHHHHHHHHHHHHHCC
Confidence 346788899975 67888899998888888888887765542 3566544 46653 233333221 123
Q ss_pred CCEE-EecChhh-HHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC------CceeecC
Q 036427 409 IPVQ-VKGFVSK-MEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN------GCGKFSK 476 (536)
Q Consensus 409 ~~V~-~~G~v~~-l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~------g~g~~~~ 476 (536)
.++. +.|+.++ +..+|+.||++|+|| | |++++|||+||+|+|+++.++..+. +.+. +.|++++
T Consensus 337 ~~v~~~~g~~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~-----v~~~~~~~~~~~G~lv~ 411 (466)
T PRK00654 337 GKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADT-----VIDYNPEDGEATGFVFD 411 (466)
T ss_pred CcEEEEEeCCHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccce-----eecCCCCCCCCceEEeC
Confidence 4555 4677644 568999999999998 4 8999999999999999987665442 3333 6677775
Q ss_pred --CHHHHHHHHHHHhCC--CHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 477 --SPKEIANMVSQWFGP--KIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 477 --d~~~La~~I~~ll~~--d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|+++|+++|.++++. +++.+++|++++.+ ..++|+++++++.+++++
T Consensus 412 ~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 412 DFNAEDLLRALRRALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYLELYRR 462 (466)
T ss_pred CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHHH
Confidence 899999999987641 56678888888753 679999999999988765
No 40
>PLN02316 synthase/transferase
Probab=99.92 E-value=3.2e-22 Score=225.15 Aligned_cols=389 Identities=16% Similarity=0.127 Sum_probs=241.8
Q ss_pred CCCCCcccCCCcccccCCcccCCCCCCCCceEEEEeC------CCCchHHHHHHHHHHHHHhccCCceEEEEeecccccC
Q 036427 116 SERNGIRDENGGVLEDEGLPLNGIENDQPKKVLILMS------DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHT 189 (536)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mKIL~~~~------~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~ 189 (536)
++.+|..|+..+.--|--.. .......+|||++++. .+ ||-.-.+.+|+++|.+. ||+|.|+.......
T Consensus 560 ~~~g~~yDn~~~~dyh~~v~-g~~~~~~pM~Il~VSsE~~P~aKv-GGLgDVV~sLp~ALa~~---Gh~V~VitP~Y~~i 634 (1036)
T PLN02316 560 KEEGGIFDNRNGLDYHIPVF-GGIAKEPPMHIVHIAVEMAPIAKV-GGLGDVVTSLSRAVQDL---NHNVDIILPKYDCL 634 (1036)
T ss_pred CCCCCCcCCCCCcCCccccc-CCCCCCCCcEEEEEEcccCCCCCc-CcHHHHHHHHHHHHHHc---CCEEEEEecCCccc
Confidence 44456677666553333222 3334456799999973 25 79999999999999999 77776654322110
Q ss_pred CC-CCCcch--hHHHHH------H----hhcccccee----ecCCCcccc-cchhhhhhhHHHHHHHHHHHHh--hCCCE
Q 036427 190 PW-PFNQLP--RSYNFL------V----KHGPLWKMT----YYGTAPRVI-HQSNFAATSTFIAREVAKGLMK--YQPDI 249 (536)
Q Consensus 190 ~~-~~~~~~--~~y~~~------~----~~~~l~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~--~kPDv 249 (536)
.. ....+. ..+... . ..-+.+.+- ++. ..... ..... ..-..+.+...+++++ .+|||
T Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~GV~vyfl~~~~~~F~-r~~~Yg~~Dd~-~RF~~F~~Aale~l~~~~~~PDI 712 (1036)
T PLN02316 635 NLSHVKDLHYQRSYSWGGTEIKVWFGKVEGLSVYFLEPQNGMFW-AGCVYGCRNDG-ERFGFFCHAALEFLLQSGFHPDI 712 (1036)
T ss_pred chhhcccceEEEEeccCCEEEEEEEEEECCcEEEEEeccccccC-CCCCCCchhHH-HHHHHHHHHHHHHHHhcCCCCCE
Confidence 00 000000 000000 0 000000000 000 00000 00000 1112233444455543 58999
Q ss_pred EEEcCcccchHHHHHHHHc---CCCCCceEEEEecCCCCc--ccccccccCCEEEEcCHHHHHHHHHhC-CC--CCCEEE
Q 036427 250 IISVHPLMQHVPLRILRAK---GLLKKIVFTTVITDLSTC--HPTWFHKLVTRCYCPTADVAKRAMKAG-LQ--ASQIKV 321 (536)
Q Consensus 250 Vi~~~~~~~~i~~~~~~~~---g~~~~ip~v~~~~d~~~~--~~~~~~~~~d~vi~~S~~~~~~l~~~g-~~--~~ki~v 321 (536)
||+|.-....+++.+.... +. .++|++..+|..... ..++....+|.++++|+..++.+...+ +. ..++.+
T Consensus 713 IHaHDW~talva~llk~~~~~~~~-~~~p~V~TiHnl~~~~n~lk~~l~~AD~ViTVS~tya~EI~~~~~l~~~~~Kl~v 791 (1036)
T PLN02316 713 IHCHDWSSAPVAWLFKDHYAHYGL-SKARVVFTIHNLEFGANHIGKAMAYADKATTVSPTYSREVSGNSAIAPHLYKFHG 791 (1036)
T ss_pred EEECCChHHHHHHHHHHhhhhhcc-CCCCEEEEeCCcccchhHHHHHHHHCCEEEeCCHHHHHHHHhccCcccccCCEEE
Confidence 9999643333333332221 22 347888777754311 123455789999999999999887754 33 478999
Q ss_pred eCCCCCCCCCCCCCc-------------------hHHHHHHcCCCC-CCCEEEEecCCCCCCcHHHHHHHHHHHhhhccc
Q 036427 322 YGLPVRPSFVKPVRP-------------------KVELRRELGMDE-DLPAVLLMGGGEGMGPIEATARALGNALYDENL 381 (536)
Q Consensus 322 ignpv~~~~~~~~~~-------------------~~~~r~~lgi~~-~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~ 381 (536)
|+|++|...+.+..+ +..+++++|++. +.++++++|+....|++..++.++...+.
T Consensus 792 I~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~---- 867 (1036)
T PLN02316 792 ILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLE---- 867 (1036)
T ss_pred EECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhh----
Confidence 999999876544311 235788899984 67889999998888888877777766543
Q ss_pred CCCCcEEEEEecCCH--H----HHHHHHcCCC--CCCEEEecChhhH--HHHHhhcCeEEECC---C-hHHHHHHHHhCC
Q 036427 382 GEPIGQVLVICGRNK--K----LANKLLSTDW--KIPVQVKGFVSKM--EEAMGACDCIITKA---G-PGTIAEAMIRGL 447 (536)
Q Consensus 382 ~~~~~~~lvi~G~~~--~----l~~~l~~~~~--~~~V~~~G~v~~l--~~ll~~aDv~V~~s---G-~~tllEAma~Gl 447 (536)
.+.++ +++|.++ . +.+..++++. ..+|.|.+..++. ..+|+.||++++|| + |++.+|||+||+
T Consensus 868 --~~~ql-VIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~Gt 944 (1036)
T PLN02316 868 --RNGQV-VLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGS 944 (1036)
T ss_pred --cCcEE-EEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCC
Confidence 35665 4457653 2 2233333332 4678888766543 37999999999999 3 899999999999
Q ss_pred cEEEeccCCccccCChhhHhh-------------CCceeecC--CHHHHHHHHHHHhCCC-HHHHHHHHHHHHHhc-CCc
Q 036427 448 PIILNDFIAGQEAGNVPYVVE-------------NGCGKFSK--SPKEIANMVSQWFGPK-IDELKAMSQNALKLA-RPD 510 (536)
Q Consensus 448 PVI~~~~~~~~e~~na~~lv~-------------~g~g~~~~--d~~~La~~I~~ll~~d-~~~~~~m~~~a~~~a-~~~ 510 (536)
|+|+++.++..+. +.+ .+.|++++ |+++|+.+|.+++. + ++.+..|++.+++.+ +.+
T Consensus 945 ppVvs~vGGL~Dt-----V~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~-~~~~~~~~~~~~~r~~m~~dF 1018 (1036)
T PLN02316 945 IPVVRKTGGLFDT-----VFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAIS-AWYDGRDWFNSLCKRVMEQDW 1018 (1036)
T ss_pred CeEEEcCCCcHhh-----ccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHh-hhhhhHHHHHHHHHHHHHhhC
Confidence 9999987765553 222 24677775 89999999999998 5 456667788777764 569
Q ss_pred hHHHHHHHHHHHHhh
Q 036427 511 AVFRIVQDLHELVRQ 525 (536)
Q Consensus 511 ~~~~i~~~i~~l~~~ 525 (536)
+|+++++.+++++++
T Consensus 1019 SW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 1019 SWNRPALDYMELYHS 1033 (1036)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999998865
No 41
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.92 E-value=1.5e-22 Score=207.78 Aligned_cols=340 Identities=17% Similarity=0.118 Sum_probs=220.3
Q ss_pred eEEEEeCCC---CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 146 KVLILMSDT---GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 146 KIL~~~~~~---GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
|||+++..+ .||+...+..|++.|.+. |++|.+.+.............. .+... ........
T Consensus 1 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~---g~~v~v~~~~~~~~~~~~~~~~---------~~~~~---~~~~~~~~ 65 (375)
T cd03821 1 KILHVIPSFDPKYGGPVRVVLNLSKALAKL---GHEVTVATTDAGGDPLLVALNG---------VPVKL---FSINVAYG 65 (375)
T ss_pred CeEEEcCCCCcccCCeehHHHHHHHHHHhc---CCcEEEEecCCCCccchhhccC---------ceeee---cccchhhh
Confidence 688887653 589999999999999888 7888776543321110000000 00000 00000000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccch-H-HHHHHHHcCCCCCceEEEEecCCCCcc-------------
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQH-V-PLRILRAKGLLKKIVFTTVITDLSTCH------------- 287 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~-i-~~~~~~~~g~~~~ip~v~~~~d~~~~~------------- 287 (536)
..... ................+||+|++++.+... . ....++..+ +|++...++.....
T Consensus 66 ~~~~~--~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~ 139 (375)
T cd03821 66 LNLAR--YLFPPSLLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYG----IPYVVSPHGMLDPWALPHKALKKRLAW 139 (375)
T ss_pred hhhhh--hccChhHHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhC----CCEEEEccccccccccccchhhhHHHH
Confidence 00000 000011112223445689999998754321 1 122233333 78776655432111
Q ss_pred ---cccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCc
Q 036427 288 ---PTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGP 364 (536)
Q Consensus 288 ---~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~ 364 (536)
..+..+.++.+++.+.......... .+..++.+++|+++.+.+.+...... ++.++.+.+.++++++|+....++
T Consensus 140 ~~~~~~~~~~~~~i~~~s~~~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~G~~~~~K~ 217 (375)
T cd03821 140 FLFERRLLQAAAAVHATSEQEAAEIRRL-GLKAPIAVIPNGVDIPPFAALPSRGR-RRKFPILPDKRIILFLGRLHPKKG 217 (375)
T ss_pred HHHHHHHHhcCCEEEECCHHHHHHHHhh-CCcccEEEcCCCcChhccCcchhhhh-hhhccCCCCCcEEEEEeCcchhcC
Confidence 0223456788888887776665443 45678999999999876654432222 666777778888999998877788
Q ss_pred HHHHHHHHHHHhhhcccCCCCcEEEEEecCCH----H-HHHHHHcCCCCCCEEEecChh--hHHHHHhhcCeEEECC---
Q 036427 365 IEATARALGNALYDENLGEPIGQVLVICGRNK----K-LANKLLSTDWKIPVQVKGFVS--KMEEAMGACDCIITKA--- 434 (536)
Q Consensus 365 ~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~----~-l~~~l~~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~s--- 434 (536)
...+++++.+... ..+++++ +++|.+. . +....++.+..++|++.|+++ ++..+|+.||++|+|+
T Consensus 218 ~~~li~a~~~l~~----~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e 292 (375)
T cd03821 218 LDLLIEAFAKLAE----RFPDWHL-VIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSE 292 (375)
T ss_pred HHHHHHHHHHhhh----hcCCeEE-EEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEEeccccC
Confidence 7777776654432 2356665 4556543 1 222225567778999999996 8999999999999998
Q ss_pred C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHh-cCCch
Q 036427 435 G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKL-ARPDA 511 (536)
Q Consensus 435 G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~-a~~~~ 511 (536)
| |++++|||++|+|||+++.++..+ ++..+.|.+++ ++++++++|.++++ +++.+++|++++++. .+.++
T Consensus 293 ~~~~~~~Eama~G~PvI~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s 365 (375)
T cd03821 293 NFGIVVAEALACGTPVVTTDKVPWQE------LIEYGCGWVVDDDVDALAAALRRALE-LPQRLKAMGENGRALVEERFS 365 (375)
T ss_pred CCCcHHHHHHhcCCCEEEcCCCCHHH------HhhcCceEEeCCChHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhcC
Confidence 3 899999999999999998654333 44447777775 66999999999999 999999999999998 67799
Q ss_pred HHHHHHHHH
Q 036427 512 VFRIVQDLH 520 (536)
Q Consensus 512 ~~~i~~~i~ 520 (536)
++++++.+.
T Consensus 366 ~~~~~~~~~ 374 (375)
T cd03821 366 WTAIAQQLL 374 (375)
T ss_pred HHHHHHHhh
Confidence 999988875
No 42
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.92 E-value=1.9e-22 Score=213.55 Aligned_cols=339 Identities=12% Similarity=0.080 Sum_probs=206.2
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCc--c
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAP--R 220 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~--~ 220 (536)
+.+||++++... .|+..+...+++.|.++ ||+|.++..... .+... . ....+ .........+ .
T Consensus 2 ~~~~~~~~~~~~-~~~~~R~~~~a~~L~~~---G~~V~ii~~~~~---~~~~~----~--~~~~~--v~~~~~~~~~~~~ 66 (415)
T cd03816 2 KRKRVCVLVLGD-IGRSPRMQYHALSLAKH---GWKVDLVGYLET---PPHDE----I--LSNPN--ITIHPLPPPPQRL 66 (415)
T ss_pred CccEEEEEEecc-cCCCHHHHHHHHHHHhc---CceEEEEEecCC---CCCHH----H--hcCCC--EEEEECCCCcccc
Confidence 357899988877 57777778899999998 788877653211 00000 0 00000 0000000000 0
Q ss_pred -cccchhhh-hhhHHHHHH-HHHHHHhhCCCEEEEcCcccc--hH-HHHHHHHcCCCCCceEEEEecCCCC---------
Q 036427 221 -VIHQSNFA-ATSTFIARE-VAKGLMKYQPDIIISVHPLMQ--HV-PLRILRAKGLLKKIVFTTVITDLST--------- 285 (536)
Q Consensus 221 -~~~~~~~~-~~~~~~~~~-l~~~l~~~kPDvVi~~~~~~~--~i-~~~~~~~~g~~~~ip~v~~~~d~~~--------- 285 (536)
........ ......... +..++++.+||+||++.+... .. ...+.+..+ .|++...|++..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~----~~~V~~~h~~~~~~~~~~~~~ 142 (415)
T cd03816 67 NKLPFLLFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRR----TKLIIDWHNYGYTILALKLGE 142 (415)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhC----CeEEEEcCCchHHHHhcccCC
Confidence 00000000 011111122 223456678999998764321 11 222233333 788766665421
Q ss_pred c---------ccccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHH-------------
Q 036427 286 C---------HPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRE------------- 343 (536)
Q Consensus 286 ~---------~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~------------- 343 (536)
. ..+++.+.+|.++++|+.+++.+.+.+.+++++.+++|+... .+.+.. .+..+..
T Consensus 143 ~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~l~~~~~~~~ki~vI~Ng~~~-~f~p~~-~~~~~~~~~~~~~~~~~~~~ 220 (415)
T cd03816 143 NHPLVRLAKWYEKLFGRLADYNLCVTKAMKEDLQQFNNWKIRATVLYDRPPE-QFRPLP-LEEKHELFLKLAKTFLTREL 220 (415)
T ss_pred CCHHHHHHHHHHHHHhhcCCEeeecCHHHHHHHHhhhccCCCeeecCCCCHH-HceeCc-HHHHHHHHHhcccccccccc
Confidence 0 013456789999999999999998888889999999998433 333221 1111111
Q ss_pred ----cCCCCCC-CEEEEecCCCCCCcHHHHHHHHHHHhhhc--ccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEE
Q 036427 344 ----LGMDEDL-PAVLLMGGGEGMGPIEATARALGNALYDE--NLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQV 413 (536)
Q Consensus 344 ----lgi~~~~-~~il~~gg~~g~k~~~~~l~al~~~l~~~--~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~ 413 (536)
.++.++. .+++++|+....+++..+++++....... ....+++++ +++|.|+ ++.+.+++.++.+.+.+
T Consensus 221 ~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l-~ivG~G~~~~~l~~~~~~~~l~~~~~~ 299 (415)
T cd03816 221 RIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLC-IITGKGPLKEKYLERIKELKLKKVTIR 299 (415)
T ss_pred ccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEE-EEEecCccHHHHHHHHHHcCCCcEEEE
Confidence 1222333 34555666666777777777775433210 001245665 5557665 45666677777644445
Q ss_pred ecCh--hhHHHHHhhcCeEEEC--C----C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHH
Q 036427 414 KGFV--SKMEEAMGACDCIITK--A----G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANM 484 (536)
Q Consensus 414 ~G~v--~~l~~ll~~aDv~V~~--s----G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~ 484 (536)
.|++ +++.++|+.||++|++ + | |++++|||+||+|||+++.++..| .+.+.++|.++.|+++|+++
T Consensus 300 ~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~e-----iv~~~~~G~lv~d~~~la~~ 374 (415)
T cd03816 300 TPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDE-----LVKHGENGLVFGDSEELAEQ 374 (415)
T ss_pred cCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHH-----HhcCCCCEEEECCHHHHHHH
Confidence 5776 6999999999999863 1 2 899999999999999998654333 23445568788899999999
Q ss_pred HHHHhCCC---HHHHHHHHHHHHHhcCC
Q 036427 485 VSQWFGPK---IDELKAMSQNALKLARP 509 (536)
Q Consensus 485 I~~ll~~d---~~~~~~m~~~a~~~a~~ 509 (536)
|..+++ | ++.+++|+++|+++.+.
T Consensus 375 i~~ll~-~~~~~~~~~~m~~~~~~~~~~ 401 (415)
T cd03816 375 LIDLLS-NFPNRGKLNSLKKGAQEESEL 401 (415)
T ss_pred HHHHHh-cCCCHHHHHHHHHHHHHhhhc
Confidence 999999 8 89999999999998844
No 43
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.92 E-value=2.1e-22 Score=206.90 Aligned_cols=338 Identities=20% Similarity=0.241 Sum_probs=221.6
Q ss_pred eEEEEeCC---CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 146 KVLILMSD---TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 146 KIL~~~~~---~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
|||+++.. ..||+..++..++++|.+. |++|.+++......... ..... ... +..... ..
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~---g~~v~v~~~~~~~~~~~-~~~~~-----~~~---~~~~~~-----~~ 63 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKR---GHEVYVVAPSYPGAPEE-EEVVV-----VRP---FRVPTF-----KY 63 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHc---CCeEEEEeCCCCCCCcc-ccccc-----ccc---cccccc-----hh
Confidence 68888733 3479999999999999998 78887765322111000 00000 000 000000 00
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCCCc---------------
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLSTC--------------- 286 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~~~--------------- 286 (536)
.. ..........+.+.+++.+||+|+++.++..... ..+.++. ++|++...++....
T Consensus 64 ~~---~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 136 (374)
T cd03817 64 PD---FRLPLPIPRALIIILKELGPDIVHTHTPFSLGLLGLRVARKL----GIPVVATYHTMYEDYTHYVPLGRLLARAV 136 (374)
T ss_pred hh---hhccccHHHHHHHHHhhcCCCEEEECCchhhhhHHHHHHHHc----CCCEEEEecCCHHHHHHHHhcccchhHHH
Confidence 00 0011112234555688899999999887554322 2233333 37887666653210
Q ss_pred ----ccccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCC
Q 036427 287 ----HPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGM 362 (536)
Q Consensus 287 ----~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~ 362 (536)
..+++.+.+|.+++.|+..++.+.+.+.+ .++.+++++++...+.+.. ....++.+++.++.+.++++|+....
T Consensus 137 ~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~~~~-~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~G~~~~~ 214 (374)
T cd03817 137 VRRKLSRRFYNRCDAVIAPSEKIADLLREYGVK-RPIEVIPTGIDLDRFEPVD-GDDERRKLGIPEDEPVLLYVGRLAKE 214 (374)
T ss_pred HHHHHHHHHhhhCCEEEeccHHHHHHHHhcCCC-CceEEcCCccchhccCccc-hhHHHHhcCCCCCCeEEEEEeeeecc
Confidence 11234568999999999999988877654 4589999999887765543 23346667777777778888876666
Q ss_pred CcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---
Q 036427 363 GPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA--- 434 (536)
Q Consensus 363 k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s--- 434 (536)
++...+++++..... ..+++++ ++.|.++ .+.+..++.+...+|.+.|++ +++.++|+.||+++.++
T Consensus 215 k~~~~l~~~~~~~~~----~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e 289 (374)
T cd03817 215 KNIDFLIRAFARLLK----EEPDVKL-VIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTE 289 (374)
T ss_pred cCHHHHHHHHHHHHH----hCCCeEE-EEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEeccccc
Confidence 777766666654432 1356665 4456654 344445556777899999998 58999999999999997
Q ss_pred -ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCC-HHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchH
Q 036427 435 -GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKS-PKEIANMVSQWFGPKIDELKAMSQNALKLARPDAV 512 (536)
Q Consensus 435 -G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d-~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~ 512 (536)
+|.+++|||++|+|||+++.++..+ .+.+.+.|.++++ .++++++|..+++ +++.+++|++++++.+.++.
T Consensus 290 ~~~~~~~Ea~~~g~PvI~~~~~~~~~-----~i~~~~~g~~~~~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~- 362 (374)
T cd03817 290 TQGLVLLEAMAAGLPVVAVDAPGLPD-----LVADGENGFLFPPGDEALAEALLRLLQ-DPELRRRLSKNAEESAEKFS- 362 (374)
T ss_pred CcChHHHHHHHcCCcEEEeCCCChhh-----heecCceeEEeCCCCHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHH-
Confidence 3799999999999999998654333 2444466777752 2299999999999 99999999999999887765
Q ss_pred HHHHHHHHHHH
Q 036427 513 FRIVQDLHELV 523 (536)
Q Consensus 513 ~~i~~~i~~l~ 523 (536)
.++.+.+++
T Consensus 363 --~~~~~~~~~ 371 (374)
T cd03817 363 --FAKKVEKLY 371 (374)
T ss_pred --HHHHHHHHH
Confidence 344444444
No 44
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.92 E-value=6.6e-22 Score=210.23 Aligned_cols=335 Identities=16% Similarity=0.168 Sum_probs=212.3
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhh-ccccceeecCCCccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKH-GPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~-~~l~~~~~~~~~~~~~~ 223 (536)
..|+|.+.+. |+...+..|++.|++.++ ++.|+++..... .+....+. .+..... +.+.
T Consensus 51 ~~iW~Ha~s~--Ge~~~~~~l~~~l~~~~~-~~~i~~t~~t~~-----------~~~~~~~~~~~~~~~~-~~P~----- 110 (425)
T PRK05749 51 PLIWFHAVSV--GETRAAIPLIRALRKRYP-DLPILVTTMTPT-----------GSERAQALFGDDVEHR-YLPY----- 110 (425)
T ss_pred CeEEEEeCCH--HHHHHHHHHHHHHHHhCC-CCcEEEeCCCcc-----------HHHHHHHhcCCCceEE-EecC-----
Confidence 3599999998 799999999999999843 566666543221 11111111 1001111 1100
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC-c---------ccccccc
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST-C---------HPTWFHK 293 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-~---------~~~~~~~ 293 (536)
.....+.+++++++||+||++........+..++..+ +|++.+.+..+. . ..+++.+
T Consensus 111 ---------d~~~~~~~~l~~~~Pd~v~~~~~~~~~~~l~~~~~~~----ip~vl~~~~~~~~s~~~~~~~~~~~r~~~~ 177 (425)
T PRK05749 111 ---------DLPGAVRRFLRFWRPKLVIIMETELWPNLIAELKRRG----IPLVLANARLSERSFKRYQKFKRFYRLLFK 177 (425)
T ss_pred ---------CcHHHHHHHHHhhCCCEEEEEecchhHHHHHHHHHCC----CCEEEEeccCChhhHHHHHHHHHHHHHHHH
Confidence 0113667789999999999864322111122334444 887755443321 0 1134567
Q ss_pred cCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCC--CchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHH
Q 036427 294 LVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPV--RPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARA 371 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~--~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~a 371 (536)
.+|.+++.|+..++.+.+.|++++ +.++||...+....+. .+...++++++ ++.+++++. +.. .++...++++
T Consensus 178 ~~d~ii~~S~~~~~~l~~~g~~~~-i~vi~n~~~d~~~~~~~~~~~~~~r~~~~--~~~~vil~~-~~~-~~~~~~ll~A 252 (425)
T PRK05749 178 NIDLVLAQSEEDAERFLALGAKNE-VTVTGNLKFDIEVPPELAARAATLRRQLA--PNRPVWIAA-STH-EGEEELVLDA 252 (425)
T ss_pred hCCEEEECCHHHHHHHHHcCCCCC-cEecccccccCCCChhhHHHHHHHHHHhc--CCCcEEEEe-CCC-chHHHHHHHH
Confidence 899999999999999999998777 8899985322222111 12345666676 455666544 332 3444445555
Q ss_pred HHHHhhhcccCCCCcEEEEEecCCH----HHHHHHHcCCCC-------------CCEEEecChhhHHHHHhhcCeEEE-C
Q 036427 372 LGNALYDENLGEPIGQVLVICGRNK----KLANKLLSTDWK-------------IPVQVKGFVSKMEEAMGACDCIIT-K 433 (536)
Q Consensus 372 l~~~l~~~~~~~~~~~~lvi~G~~~----~l~~~l~~~~~~-------------~~V~~~G~v~~l~~ll~~aDv~V~-~ 433 (536)
+.+... ..+++++ +++|.++ ++.+.+++.++. .+|.+.+..+++..+|+.||++++ +
T Consensus 253 ~~~l~~----~~~~~~l-iivG~g~~r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~ 327 (425)
T PRK05749 253 HRALLK----QFPNLLL-ILVPRHPERFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVGG 327 (425)
T ss_pred HHHHHH----hCCCcEE-EEcCCChhhHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEECC
Confidence 544332 2467664 5567765 344555555442 256777777899999999999665 3
Q ss_pred C----ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC
Q 036427 434 A----GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARP 509 (536)
Q Consensus 434 s----G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~ 509 (536)
| ||.+++|||+||+|||+++..++..+ ..+.+.+.|....+.|+++|+++|..+++ |++.+++|+++|++.+..
T Consensus 328 S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e-~~~~~~~~g~~~~~~d~~~La~~l~~ll~-~~~~~~~m~~~a~~~~~~ 405 (425)
T PRK05749 328 SLVKRGGHNPLEPAAFGVPVISGPHTFNFKE-IFERLLQAGAAIQVEDAEDLAKAVTYLLT-DPDARQAYGEAGVAFLKQ 405 (425)
T ss_pred CcCCCCCCCHHHHHHhCCCEEECCCccCHHH-HHHHHHHCCCeEEECCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHh
Confidence 3 58899999999999999886543322 22333455655556799999999999999 999999999999998744
Q ss_pred --chHHHHHHHHHHHHh
Q 036427 510 --DAVFRIVQDLHELVR 524 (536)
Q Consensus 510 --~~~~~i~~~i~~l~~ 524 (536)
...+++.+.+.+.++
T Consensus 406 ~~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 406 NQGALQRTLQLLEPYLP 422 (425)
T ss_pred CccHHHHHHHHHHHhcc
Confidence 566777777766544
No 45
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.91 E-value=4e-22 Score=209.90 Aligned_cols=216 Identities=16% Similarity=0.102 Sum_probs=158.7
Q ss_pred cccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCch-HHHHHHcCCCCCCCEEEEecC-CCCCCcHHHHH
Q 036427 292 HKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPK-VELRRELGMDEDLPAVLLMGG-GEGMGPIEATA 369 (536)
Q Consensus 292 ~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~-~~~r~~lgi~~~~~~il~~gg-~~g~k~~~~~l 369 (536)
.+.+|.++++|+..++.+.+.. .+++.+++|+++.+.+.+.... ...+....+.++.++++++|+ ....|+...++
T Consensus 154 ~~~ad~vi~~s~~~~~~~~~~~--~~ki~vI~ngvd~~~f~~~~~~~~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll 231 (396)
T cd03818 154 LAQADAGVSPTRWQRSTFPAEL--RSRISVIHDGIDTDRLRPDPQARLRLPNGRVLTPGDEVITFVARNLEPYRGFHVFM 231 (396)
T ss_pred HHhCCEEECCCHHHHhhCcHhh--ccceEEeCCCccccccCCCchhhhcccccccCCCCCeEEEEECCCcccccCHHHHH
Confidence 4678999999999998765532 3789999999998877654221 112222334566778888887 45567888888
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecCC----------HHHH-HHHHcCC---CCCCEEEecCh--hhHHHHHhhcCeEEEC
Q 036427 370 RALGNALYDENLGEPIGQVLVICGRN----------KKLA-NKLLSTD---WKIPVQVKGFV--SKMEEAMGACDCIITK 433 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~~----------~~l~-~~l~~~~---~~~~V~~~G~v--~~l~~ll~~aDv~V~~ 433 (536)
+++..... ..++++++++++.+ +.+. +.+++.. ..++|+|+|++ +++.++|+.||++|.+
T Consensus 232 ~a~~~l~~----~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~~~~~l~~adv~v~~ 307 (396)
T cd03818 232 RALPRLLR----ARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQYLALLQVSDVHVYL 307 (396)
T ss_pred HHHHHHHH----HCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHHHHHHHHhCcEEEEc
Confidence 87765443 25778766654321 1122 2233332 24689999998 4899999999999999
Q ss_pred C---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHh
Q 036427 434 A---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKL 506 (536)
Q Consensus 434 s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~ 506 (536)
| + +.+++|||+||+|||+++.++..+ ++++ ..|.+++ |+++++++|.++++ +++.+++|+++|++.
T Consensus 308 s~~e~~~~~llEAmA~G~PVIas~~~g~~e------~i~~~~~G~lv~~~d~~~la~~i~~ll~-~~~~~~~l~~~ar~~ 380 (396)
T cd03818 308 TYPFVLSWSLLEAMACGCLVVGSDTAPVRE------VITDGENGLLVDFFDPDALAAAVIELLD-DPARRARLRRAARRT 380 (396)
T ss_pred CcccccchHHHHHHHCCCCEEEcCCCCchh------hcccCCceEEcCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHH
Confidence 8 3 689999999999999998755443 4444 4677764 89999999999999 999999999999998
Q ss_pred cCC-chHHHHHHHHH
Q 036427 507 ARP-DAVFRIVQDLH 520 (536)
Q Consensus 507 a~~-~~~~~i~~~i~ 520 (536)
+.+ ++++++++.++
T Consensus 381 ~~~~fs~~~~~~~~~ 395 (396)
T cd03818 381 ALRYDLLSVCLPRQL 395 (396)
T ss_pred HHHhccHHHHHHHHh
Confidence 866 88888887765
No 46
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.91 E-value=1.1e-21 Score=201.69 Aligned_cols=328 Identities=14% Similarity=0.075 Sum_probs=222.8
Q ss_pred eEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccch
Q 036427 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQS 225 (536)
Q Consensus 146 KIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~ 225 (536)
|||+++...+.|.......+++.|.++ |++|.+.+.............. ....... ..
T Consensus 1 ki~~~~~~~~~~~~~~~~~~~~~L~~~---g~~v~v~~~~~~~~~~~~~~~~-------~~~~~~~---------~~--- 58 (355)
T cd03799 1 KIAYLVKEFPRLSETFILREILALEAA---GHEVEIFSLRPPEDTLVHPEDR-------AELARTR---------YL--- 58 (355)
T ss_pred CEEEECCCCCCcchHHHHHHHHHHHhC---CCeEEEEEecCccccccccccc-------ccccchH---------HH---
Confidence 799999887777889999999999998 8888777643321110000000 0000000 00
Q ss_pred hhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc------ccccccccCCEEE
Q 036427 226 NFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC------HPTWFHKLVTRCY 299 (536)
Q Consensus 226 ~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~------~~~~~~~~~d~vi 299 (536)
............+.+.+++.+||+||++................ .+|++...+..... ..++..+.+|.++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 135 (355)
T cd03799 59 ARSLALLAQALVLARELRRLGIDHIHAHFGTTPATVAMLASRLG---GIPYSFTAHGKDIFRSPDAIDLDEKLARADFVV 135 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHHhc---CCCEEEEEecccccccCchHHHHHHHhhCCEEE
Confidence 01112223344666777889999999987643332222222221 36776555532211 1133456799999
Q ss_pred EcCHHHHHHHHHh-CCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhh
Q 036427 300 CPTADVAKRAMKA-GLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYD 378 (536)
Q Consensus 300 ~~S~~~~~~l~~~-g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~ 378 (536)
+.|+..++.+.+. +.+..++.+++|+++...+.+.. .....+...++++|+....++...+++++.....
T Consensus 136 ~~s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~--------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~- 206 (355)
T cd03799 136 AISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRP--------PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKD- 206 (355)
T ss_pred ECCHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCcc--------ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhh-
Confidence 9999999999886 67788999999999877665432 0122345667788877667777777776654332
Q ss_pred cccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---------C-hHHHHHHH
Q 036427 379 ENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---------G-PGTIAEAM 443 (536)
Q Consensus 379 ~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---------G-~~tllEAm 443 (536)
..+++++ +++|.++ ++.+.+++.+..++|.+.|++ +++..+|+.||++++|+ | |++++|||
T Consensus 207 ---~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~ 282 (355)
T cd03799 207 ---RGIDFRL-DIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAM 282 (355)
T ss_pred ---cCCCeEE-EEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHH
Confidence 2356665 4456654 445556666777899999998 58999999999999975 2 78999999
Q ss_pred HhCCcEEEeccCCccccCChhhHhhCC-ceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHHH
Q 036427 444 IRGLPIILNDFIAGQEAGNVPYVVENG-CGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQD 518 (536)
Q Consensus 444 a~GlPVI~~~~~~~~e~~na~~lv~~g-~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~ 518 (536)
++|+|+|+++.++..+ +++.+ .|.++. |+++++++|..+++ +++.+.+|++++++.+ ..++++.+++.
T Consensus 283 a~G~Pvi~~~~~~~~~------~i~~~~~g~~~~~~~~~~l~~~i~~~~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 283 AMGLPVISTDVSGIPE------LVEDGETGLLVPPGDPEALADAIERLLD-DPELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred HcCCCEEecCCCCcch------hhhCCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 9999999988654333 55555 777774 89999999999999 9999999999999876 45788877654
No 47
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.91 E-value=4.1e-22 Score=205.40 Aligned_cols=350 Identities=17% Similarity=0.131 Sum_probs=221.7
Q ss_pred eEEEEeCCCC---chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 146 KVLILMSDTG---GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 146 KIL~~~~~~G---gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
||||++...+ ||+..++..++++|.+. |++|.++.............. ... ........+............
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~---g~~v~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~ 75 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKR---GHEVTVITGSPNYPSGKIYKG-YKR-EEVDGVRVHRVPLPPYKKNGL 75 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhC---CceEEEEecCCCccccccccc-ceE-EecCCeEEEEEecCCCCccch
Confidence 7899986533 69999999999999998 788877654332111110000 000 000000111111000000000
Q ss_pred cchhhhhhhHHHHHHHHHHH--HhhCCCEEEEcCcc-cchHHHHHHHHcCCCCCceEEEEecCCCCcc------------
Q 036427 223 HQSNFAATSTFIAREVAKGL--MKYQPDIIISVHPL-MQHVPLRILRAKGLLKKIVFTTVITDLSTCH------------ 287 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l--~~~kPDvVi~~~~~-~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~------------ 287 (536)
... ..............+ +..+||+|+++.+. ....+....++.. ++|++...+|.....
T Consensus 76 ~~~--~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~---~~~~i~~~h~~~~~~~~~~~~~~~~~~ 150 (394)
T cd03794 76 LKR--LLNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLK---GAPFVLEVRDLWPESAVALGLLKNGSL 150 (394)
T ss_pred HHH--HHhhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHhc---CCCEEEEehhhcchhHHHccCccccch
Confidence 000 001111222333334 47899999999833 2222222222221 378887777643100
Q ss_pred --------cccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCC
Q 036427 288 --------PTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGG 359 (536)
Q Consensus 288 --------~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~ 359 (536)
.++..+.+|.+++.|+...+.+...+.+..++.++++++++..+.+...... +..+....+...++++|+.
T Consensus 151 ~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~G~~ 229 (394)
T cd03794 151 LYRLLRKLERLIYRRADAIVVISPGMREYLVRRGVPPEKISVIPNGVDLELFKPPPADES-LRKELGLDDKFVVLYAGNI 229 (394)
T ss_pred HHHHHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCCcCceEEcCCCCCHHHcCCccchhh-hhhccCCCCcEEEEEecCc
Confidence 0234578899999999999998867788889999999998876654432222 3444455566677777776
Q ss_pred CCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHH---HHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC
Q 036427 360 EGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKK---LANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA 434 (536)
Q Consensus 360 ~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~---l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s 434 (536)
...++...+++++..... .+++++ +++|.+.. +.+.+.... .++|.+.|++ +++.++|+.||++|+++
T Consensus 230 ~~~k~~~~l~~~~~~l~~-----~~~~~l-~i~G~~~~~~~~~~~~~~~~-~~~v~~~g~~~~~~~~~~~~~~di~i~~~ 302 (394)
T cd03794 230 GRAQGLDTLLEAAALLKD-----RPDIRF-LIVGDGPEKEELKELAKALG-LDNVTFLGRVPKEELPELLAAADVGLVPL 302 (394)
T ss_pred ccccCHHHHHHHHHHHhh-----cCCeEE-EEeCCcccHHHHHHHHHHcC-CCcEEEeCCCChHHHHHHHHhhCeeEEec
Confidence 666777777776654432 245664 55676652 223222333 3689999988 48999999999999986
Q ss_pred C---------hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 435 G---------PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 435 G---------~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
. |.+++|||++|+|||+++.++..+. +.+.+.|.++. |+++++++|.++++ +++.+++|++++
T Consensus 303 ~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~-----~~~~~~g~~~~~~~~~~l~~~i~~~~~-~~~~~~~~~~~~ 376 (394)
T cd03794 303 KPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL-----VEEAGAGLVVPPGDPEALAAAILELLD-DPEERAEMGENG 376 (394)
T ss_pred cCcccccccCchHHHHHHHCCCcEEEecCCCchhh-----hccCCcceEeCCCCHHHHHHHHHHHHh-ChHHHHHHHHHH
Confidence 1 5678999999999999997665442 44446677664 89999999999999 999999999999
Q ss_pred HHhcC-CchHHHHHHHH
Q 036427 504 LKLAR-PDAVFRIVQDL 519 (536)
Q Consensus 504 ~~~a~-~~~~~~i~~~i 519 (536)
++++. .++++++++.+
T Consensus 377 ~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 377 RRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHhhcHHHHHHhc
Confidence 99887 68999888765
No 48
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.91 E-value=1.1e-21 Score=216.17 Aligned_cols=278 Identities=17% Similarity=0.157 Sum_probs=187.2
Q ss_pred HHHHHHHHHHH-h--hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc----------------c------
Q 036427 233 FIAREVAKGLM-K--YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC----------------H------ 287 (536)
Q Consensus 233 ~~~~~l~~~l~-~--~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~----------------~------ 287 (536)
.+...+.+.+. + .+||+||++......+...++++.| +|++.+.|.+... +
T Consensus 369 ~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~lg----VP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ 444 (784)
T TIGR02470 369 TFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLG----VTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFT 444 (784)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhcC----CCEEEECCcchhhcccccccccccchhHHHhhhhhh
Confidence 34445555443 2 3699999987544344444555555 8987665533210 0
Q ss_pred -cccccccCCEEEEcCHHHHH----HHHHh----------------CC--CCCCEEEeCCCCCCCCCCCCCchH------
Q 036427 288 -PTWFHKLVTRCYCPTADVAK----RAMKA----------------GL--QASQIKVYGLPVRPSFVKPVRPKV------ 338 (536)
Q Consensus 288 -~~~~~~~~d~vi~~S~~~~~----~l~~~----------------g~--~~~ki~vignpv~~~~~~~~~~~~------ 338 (536)
..+....+|.+++.+..... .+..| |+ +..|+.++++++|...+.+.....
T Consensus 445 ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~ 524 (784)
T TIGR02470 445 ADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNL 524 (784)
T ss_pred HHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhh
Confidence 01234458999999875432 11111 23 457899999999988665432211
Q ss_pred ------------HHHHHcCC--CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--------
Q 036427 339 ------------ELRRELGM--DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-------- 396 (536)
Q Consensus 339 ------------~~r~~lgi--~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-------- 396 (536)
+.++.+|+ ++++++|+++|+....|++..+++++.+.-. ..++.++++++|...
T Consensus 525 ~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~----l~~~~~LVIVGGg~~~~~s~d~e 600 (784)
T TIGR02470 525 HPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPK----LRELVNLVVVAGKLDAKESKDRE 600 (784)
T ss_pred hcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHh----hCCCeEEEEEeCCcccccccchh
Confidence 12356665 5678899999998888998888888764311 124466666655321
Q ss_pred ------HHHHHHHcCCCCCCEEEecCh---hhHHHHHh----hcCeEEECC----ChHHHHHHHHhCCcEEEeccCCccc
Q 036427 397 ------KLANKLLSTDWKIPVQVKGFV---SKMEEAMG----ACDCIITKA----GPGTIAEAMIRGLPIILNDFIAGQE 459 (536)
Q Consensus 397 ------~l~~~l~~~~~~~~V~~~G~v---~~l~~ll~----~aDv~V~~s----G~~tllEAma~GlPVI~~~~~~~~e 459 (536)
++.+.+++.++..+|.|+|+. .+..++|+ .+|++|+|| .|+|++|||+||+|||+++.++..+
T Consensus 601 e~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~E 680 (784)
T TIGR02470 601 EQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLE 680 (784)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHH
Confidence 122344566788899999975 24555664 347999998 4899999999999999999655433
Q ss_pred cCChhhHhhCCceeecC--CHHHHHHHHHHHh----CCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHHh
Q 036427 460 AGNVPYVVENGCGKFSK--SPKEIANMVSQWF----GPKIDELKAMSQNALKLA-RPDAVFRIVQDLHELVR 524 (536)
Q Consensus 460 ~~na~~lv~~g~g~~~~--d~~~La~~I~~ll----~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~l~~ 524 (536)
. +.+...|++++ |+++++++|.+++ . |++.+++|+++|++.+ +.++|+++++.++++..
T Consensus 681 i-----V~dg~tGfLVdp~D~eaLA~aL~~ll~kll~-dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~~ 746 (784)
T TIGR02470 681 I-----IQDGVSGFHIDPYHGEEAAEKIVDFFEKCDE-DPSYWQKISQGGLQRIYEKYTWKIYSERLLTLAG 746 (784)
T ss_pred H-----hcCCCcEEEeCCCCHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 2 44445577775 8999999999875 6 8999999999999876 66899999999987663
No 49
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.91 E-value=4.7e-22 Score=201.78 Aligned_cols=322 Identities=17% Similarity=0.193 Sum_probs=213.4
Q ss_pred eEEEEeCCC-CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 146 KVLILMSDT-GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 146 KIL~~~~~~-GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
||++++... +||+.+.+..++++|.+. |++|.+............ ...... ....... .
T Consensus 1 kIl~~~~~~~~gG~~~~~~~l~~~l~~~---g~~v~v~~~~~~~~~~~~--~~~~~~----~~~~~~~-~---------- 60 (353)
T cd03811 1 KILFVIPSLGGGGAERVLLNLANGLDKR---GYDVTLVVLRDEGDYLEL--LPSNVK----LIPVRVL-K---------- 60 (353)
T ss_pred CeEEEeecccCCCcchhHHHHHHHHHhc---CceEEEEEcCCCCccccc--cccchh----hhceeee-e----------
Confidence 789988764 689999999999999887 788877654332111100 000000 0000000 0
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc----------ccccccc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH----------PTWFHKL 294 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~----------~~~~~~~ 294 (536)
............+.+++++.+||+|+++......+...+..+. ++|.+...++..... ..+..+.
T Consensus 61 -~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (353)
T cd03811 61 -LKSLRDLLAILRLRRLLRKEKPDVVISHLTTTPNVLALLAARL----GTKLIVWEHNSLSLELKRKLRLLLLIRKLYRR 135 (353)
T ss_pred -cccccchhHHHHHHHHHHhcCCCEEEEcCccchhHHHHHHhhc----CCceEEEEcCcchhhhccchhHHHHHHhhccc
Confidence 0001122334577888999999999999872212212222221 378887777654211 1234578
Q ss_pred CCEEEEcCHHHHHHHHHhC-CCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHH
Q 036427 295 VTRCYCPTADVAKRAMKAG-LQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALG 373 (536)
Q Consensus 295 ~d~vi~~S~~~~~~l~~~g-~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~ 373 (536)
+|.+++.|+..++.+.+.+ .+..++.+++++++...+........ .+....+..+++++|+....++...+++++.
T Consensus 136 ~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~ 212 (353)
T cd03811 136 ADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPL---ELGIPPDGPVILAVGRLSPQKGFDTLIRAFA 212 (353)
T ss_pred cceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhh---hcCCCCCceEEEEEecchhhcChHHHHHHHH
Confidence 9999999999999988864 34678999999999876654322211 3445566677888888766677666666665
Q ss_pred HHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhC
Q 036427 374 NALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRG 446 (536)
Q Consensus 374 ~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~G 446 (536)
.... ..+++++ +++|.++ .+.+.+++.+..++|.+.|+.+++.++|+.||++|.|+ | |++++|||++|
T Consensus 213 ~l~~----~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G 287 (353)
T cd03811 213 LLRK----EGPDARL-VILGDGPLREELEALAKELGLADRVHFLGFQSNPYPYLKAADLFVLSSRYEGFPNVLLEAMALG 287 (353)
T ss_pred Hhhh----cCCCceE-EEEcCCccHHHHHHHHHhcCCCccEEEecccCCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhC
Confidence 4332 2356665 4456654 34456666777889999999999999999999999997 3 89999999999
Q ss_pred CcEEEeccCCccccCChhhHhhCCceeecC--CHHHH---HHHHHHHhCCCHHHHHHHHHHHHHh
Q 036427 447 LPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEI---ANMVSQWFGPKIDELKAMSQNALKL 506 (536)
Q Consensus 447 lPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~L---a~~I~~ll~~d~~~~~~m~~~a~~~ 506 (536)
+|||+++.++..+ .+.+...|.+++ +++++ .+.+..+.+ +++.++++++++++.
T Consensus 288 ~PvI~~~~~~~~e-----~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~ 346 (353)
T cd03811 288 TPVVATDCPGPRE-----ILEDGENGLLVPVGDEAALAAAALALLDLLL-DPELRERLAAAARER 346 (353)
T ss_pred CCEEEcCCCChHH-----HhcCCCceEEECCCCHHHHHHHHHHHHhccC-ChHHHHHHHHHHHHH
Confidence 9999998654333 244445566664 67777 778888888 899999999866554
No 50
>PLN02949 transferase, transferring glycosyl groups
Probab=99.91 E-value=1.5e-21 Score=207.93 Aligned_cols=359 Identities=15% Similarity=0.092 Sum_probs=224.6
Q ss_pred CCceEEEEeCC--CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCc-chhHH-HHHHh--hcccccee-ec
Q 036427 143 QPKKVLILMSD--TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQ-LPRSY-NFLVK--HGPLWKMT-YY 215 (536)
Q Consensus 143 ~~mKIL~~~~~--~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~-~~~~y-~~~~~--~~~l~~~~-~~ 215 (536)
++++|+|+.++ .|||.++.....+.+|.++ +++++|.+.+..-+... .. +.... .+-.+ ..+.+..+ ..
T Consensus 32 ~~~~v~f~HP~~~~ggG~ERvl~~a~~~l~~~-~~~~~v~iyt~~~d~~~---~~~l~~~~~~~~i~~~~~~~~v~l~~~ 107 (463)
T PLN02949 32 RKRAVGFFHPYTNDGGGGERVLWCAVRAIQEE-NPDLDCVIYTGDHDASP---DSLAARARDRFGVELLSPPKVVHLRKR 107 (463)
T ss_pred CCcEEEEECCCCCCCCChhhHHHHHHHHHHhh-CCCCeEEEEcCCCCCCH---HHHHHHHHhhcceecCCCceEEEeccc
Confidence 45699999865 6679999999999999998 44557777654322111 01 00000 00000 00101101 00
Q ss_pred C-CCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec--CCCC-------
Q 036427 216 G-TAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT--DLST------- 285 (536)
Q Consensus 216 ~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~--d~~~------- 285 (536)
. ..+..+.................+.+.+..||+++-+..+...+|+ ++..+ .|++.++| +...
T Consensus 108 ~~~~~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~~~~pl--~~~~~----~~v~~yvH~p~~~~dm~~~v~ 181 (463)
T PLN02949 108 KWIEEETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYAFTYPL--ARLFG----CKVVCYTHYPTISSDMISRVR 181 (463)
T ss_pred cccccccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccHHHH--HHhcC----CcEEEEEeCCcchHHHHHHHh
Confidence 0 0000000100111111122222233444678877655554444444 34333 67776665 2110
Q ss_pred ------------c-----------c-------cccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCC
Q 036427 286 ------------C-----------H-------PTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVR 335 (536)
Q Consensus 286 ------------~-----------~-------~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~ 335 (536)
. + ..+..+.+|.+++.|+.+++.+.+....+.++.++++|++...+....
T Consensus 182 ~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~ 261 (463)
T PLN02949 182 DRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALP 261 (463)
T ss_pred hcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCC
Confidence 0 0 011236789999999999999877543346789999998764332111
Q ss_pred chHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCC---------HHHHHHHHcCC
Q 036427 336 PKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRN---------KKLANKLLSTD 406 (536)
Q Consensus 336 ~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~---------~~l~~~l~~~~ 406 (536)
.+ .+++.+.++++|+....|+...+++++.+..++.....++++++++ |.+ .++++..++.+
T Consensus 262 -~~-------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIv-G~~~~~~~~~~~~eL~~la~~l~ 332 (463)
T PLN02949 262 -LE-------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFV-GSCRNKEDEERLQKLKDRAKELG 332 (463)
T ss_pred -cc-------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEE-eCCCCcccHHHHHHHHHHHHHcC
Confidence 00 1134567888998888888888888876544311111356765554 542 13455566778
Q ss_pred CCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhh----CCceeecC
Q 036427 407 WKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE----NGCGKFSK 476 (536)
Q Consensus 407 ~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~----~g~g~~~~ 476 (536)
+.++|+|+|++ +++.++|+.||+++.++ + |++++|||++|+|||+++.++..++ ++. ...|++++
T Consensus 333 L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~e-----IV~~~~~g~tG~l~~ 407 (463)
T PLN02949 333 LDGDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMD-----IVLDEDGQQTGFLAT 407 (463)
T ss_pred CCCcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcce-----eeecCCCCcccccCC
Confidence 88999999998 58999999999999987 3 8999999999999999997653222 322 23466778
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 477 SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 477 d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|+++++++|.++++++++.+++|+++|++.+.+++++++++.+.+.+++
T Consensus 408 ~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~ 456 (463)
T PLN02949 408 TVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRP 456 (463)
T ss_pred CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 9999999999999845788999999999999889999999999887765
No 51
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.91 E-value=9.5e-23 Score=214.71 Aligned_cols=274 Identities=15% Similarity=0.111 Sum_probs=189.8
Q ss_pred hHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC-----------ccc-----------
Q 036427 231 STFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST-----------CHP----------- 288 (536)
Q Consensus 231 ~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-----------~~~----------- 288 (536)
+..+.+.+.+++++.++|+||++...+... ...+.. ++|++...+|... ...
T Consensus 89 ~~~~~~~l~~~~~~~~~D~v~~~~~~~~~~--~~~~~~----~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (397)
T TIGR03087 89 SRRLARWVNALLAAEPVDAIVVFSSAMAQY--VTPHVR----GVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLL 162 (397)
T ss_pred CHHHHHHHHHHHhhCCCCEEEEecccccee--cccccc----CCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHH
Confidence 444566788888999999999987543211 111112 3777755554310 000
Q ss_pred ----ccccccCCEEEEcCHHHHHHHHHhC-CCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCC
Q 036427 289 ----TWFHKLVTRCYCPTADVAKRAMKAG-LQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMG 363 (536)
Q Consensus 289 ----~~~~~~~d~vi~~S~~~~~~l~~~g-~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k 363 (536)
+++.+.+|.++++|+..++.+.+.+ ..+.++.+++|+++.+.+.+..... ..+..+.++++++|+....+
T Consensus 163 ~~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~~-----~~~~~~~~~ilf~G~l~~~k 237 (397)
T TIGR03087 163 LAYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDYP-----NPYPPGKRVLVFTGAMDYWP 237 (397)
T ss_pred HHHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCcccc-----CCCCCCCcEEEEEEecCCcc
Confidence 1234689999999999999987753 4567899999999988765432111 11234557788888876667
Q ss_pred cHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC----C-hHH
Q 036427 364 PIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA----G-PGT 438 (536)
Q Consensus 364 ~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s----G-~~t 438 (536)
+...++..+.+.+.......++++++ ++|.++. +.++++...++|+|+|+++++..+|+.||++|+|+ | +++
T Consensus 238 ~~~~l~~~~~~~~~~l~~~~p~~~l~-ivG~g~~--~~~~~l~~~~~V~~~G~v~~~~~~~~~adv~v~Ps~~~eG~~~~ 314 (397)
T TIGR03087 238 NIDAVVWFAERVFPAVRARRPAAEFY-IVGAKPS--PAVRALAALPGVTVTGSVADVRPYLAHAAVAVAPLRIARGIQNK 314 (397)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCcEEE-EECCCCh--HHHHHhccCCCeEEeeecCCHHHHHHhCCEEEecccccCCcccH
Confidence 76554432222211111124777764 4576652 23444444568999999999999999999999986 4 678
Q ss_pred HHHHHHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHH
Q 036427 439 IAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIV 516 (536)
Q Consensus 439 llEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~ 516 (536)
++|||+||+|||+++..... .....+.|.++ .|+++++++|.++++ |++.+++|+++|++++ +.++|++++
T Consensus 315 ~lEAma~G~PVV~t~~~~~~------i~~~~~~g~lv~~~~~~la~ai~~ll~-~~~~~~~~~~~ar~~v~~~fsw~~~~ 387 (397)
T TIGR03087 315 VLEAMAMAKPVVASPEAAEG------IDALPGAELLVAADPADFAAAILALLA-NPAEREELGQAARRRVLQHYHWPRNL 387 (397)
T ss_pred HHHHHHcCCCEEecCccccc------ccccCCcceEeCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 99999999999999853211 12234566665 499999999999999 9999999999999987 568999999
Q ss_pred HHHHHHHhh
Q 036427 517 QDLHELVRQ 525 (536)
Q Consensus 517 ~~i~~l~~~ 525 (536)
+.+.+++++
T Consensus 388 ~~~~~~l~~ 396 (397)
T TIGR03087 388 ARLDALLEQ 396 (397)
T ss_pred HHHHHHhcC
Confidence 999998754
No 52
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.91 E-value=2.9e-22 Score=209.71 Aligned_cols=341 Identities=13% Similarity=0.082 Sum_probs=212.5
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe-ecccc--cCC----CCCCcchhHHHHHHhhccccceeecCC
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT-DLWSD--HTP----WPFNQLPRSYNFLVKHGPLWKMTYYGT 217 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~-~~~~~--~~~----~~~~~~~~~y~~~~~~~~l~~~~~~~~ 217 (536)
.||+|.++++ |||..++ +|+++|+++ +.++.+. ..... ..+ +++..+. ...+..
T Consensus 6 ~ki~i~aGgt-sGhi~pa-al~~~l~~~---~~~~~~~g~gg~~m~~~g~~~~~~~~~l~--------v~G~~~------ 66 (385)
T TIGR00215 6 PTIALVAGEA-SGDILGA-GLRQQLKEH---YPNARFIGVAGPRMAAEGCEVLYSMEELS--------VMGLRE------ 66 (385)
T ss_pred CeEEEEeCCc-cHHHHHH-HHHHHHHhc---CCCcEEEEEccHHHHhCcCccccChHHhh--------hccHHH------
Confidence 5899999999 7999999 999999987 4555433 22111 111 1111110 000000
Q ss_pred CcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCCC---cccccccc
Q 036427 218 APRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLST---CHPTWFHK 293 (536)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~---~~~~~~~~ 293 (536)
..+ .........+++.+++++++||+|++++. .. .|+.+++..... ++|++.++. ..+. ...+.+.+
T Consensus 67 ----~l~--~~~~~~~~~~~~~~~l~~~kPd~vi~~g~-~~-~~~~~a~aa~~~-gip~v~~i~P~~waw~~~~~r~l~~ 137 (385)
T TIGR00215 67 ----VLG--RLGRLLKIRKEVVQLAKQAKPDLLVGIDA-PD-FNLTKELKKKDP-GIKIIYYISPQVWAWRKWRAKKIEK 137 (385)
T ss_pred ----HHH--HHHHHHHHHHHHHHHHHhcCCCEEEEeCC-CC-ccHHHHHHHhhC-CCCEEEEeCCcHhhcCcchHHHHHH
Confidence 000 11122334458888999999999999884 32 233332222222 389876543 2121 12246778
Q ss_pred cCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHH
Q 036427 294 LVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALG 373 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~ 373 (536)
.+|.+++.++...+.+.++|. +..++|||+.+........+.+.+++++++++.+++++++|+.+.+ ..+.+..+.
T Consensus 138 ~~d~v~~~~~~e~~~~~~~g~---~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~ae-i~k~~~~ll 213 (385)
T TIGR00215 138 ATDFLLAILPFEKAFYQKKNV---PCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLALLPGSRGSE-VEKLFPLFL 213 (385)
T ss_pred HHhHhhccCCCcHHHHHhcCC---CEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEEEECCCCHHH-HHHhHHHHH
Confidence 999999999999888876654 4678999997765432123556788899998889998899887653 233333333
Q ss_pred HHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEE
Q 036427 374 NALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPII 450 (536)
Q Consensus 374 ~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI 450 (536)
+++.......++.++++..+.+. .+.+..+.++...++.+.+ .++.++|+.||++|++||..|+ |+|++|+|+|
T Consensus 214 ~a~~~l~~~~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~l~aADl~V~~SGt~tl-Ea~a~G~P~V 290 (385)
T TIGR00215 214 KAAQLLEQQEPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLID--GDARKAMFAADAALLASGTAAL-EAALIKTPMV 290 (385)
T ss_pred HHHHHHHHhCCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEEC--chHHHHHHhCCEEeecCCHHHH-HHHHcCCCEE
Confidence 22221111246666655444432 2333333344444565544 3678899999999999997666 9999999999
Q ss_pred Eec----cC---Ccc-----ccCChhhHhhCCceeec-C---CHHHHHHHHHHHhCCCH----HHHHHHHHHHHH----h
Q 036427 451 LND----FI---AGQ-----EAGNVPYVVENGCGKFS-K---SPKEIANMVSQWFGPKI----DELKAMSQNALK----L 506 (536)
Q Consensus 451 ~~~----~~---~~~-----e~~na~~lv~~g~g~~~-~---d~~~La~~I~~ll~~d~----~~~~~m~~~a~~----~ 506 (536)
++. .. +.+ +..++..+.+.+....+ . +++.|++.+.++++ |+ +.++++.+.-.+ +
T Consensus 291 v~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~l 369 (385)
T TIGR00215 291 VGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLE-NGLKAYKEMHRERQFFEELRQRI 369 (385)
T ss_pred EEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhc-CCcccHHHHHHHHHHHHHHHHHh
Confidence 993 32 111 44566666655544332 2 79999999999999 88 777777665443 3
Q ss_pred cCCchHHHHHHHHHH
Q 036427 507 ARPDAVFRIVQDLHE 521 (536)
Q Consensus 507 a~~~~~~~i~~~i~~ 521 (536)
..+.+.++.++.|.+
T Consensus 370 ~~~~~~~~~a~~i~~ 384 (385)
T TIGR00215 370 YCNADSERAAQAVLE 384 (385)
T ss_pred cCCCHHHHHHHHHhh
Confidence 455677888877754
No 53
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.91 E-value=2.4e-21 Score=202.81 Aligned_cols=267 Identities=14% Similarity=0.102 Sum_probs=188.5
Q ss_pred HHHHHHHh---hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEcCHHHHHHHHHhC
Q 036427 237 EVAKGLMK---YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAG 313 (536)
Q Consensus 237 ~l~~~l~~---~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~~~~~~l~~~g 313 (536)
.+...+.. .++|+|+++..... ...+.++. .+.+++...|+.. .+ .....++.++++|+..++.+.+.
T Consensus 87 ~~~~~~~~~~~~~~~vi~v~~~~~~--~~~~~~~~---~~~~~v~~~h~~~--~~-~~~~~~~~ii~~S~~~~~~~~~~- 157 (380)
T PRK15484 87 RILNIAHKFTITKDSVIVIHNSMKL--YRQIRERA---PQAKLVMHMHNAF--EP-ELLDKNAKIIVPSQFLKKFYEER- 157 (380)
T ss_pred HHHHHHHhcCCCCCcEEEEeCcHHh--HHHHHhhC---CCCCEEEEEeccc--Ch-hHhccCCEEEEcCHHHHHHHHhh-
Confidence 44444444 55899998874321 11222222 1356664444321 11 12346789999999999887764
Q ss_pred CCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEec
Q 036427 314 LQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICG 393 (536)
Q Consensus 314 ~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G 393 (536)
.+..++.+++|+++...+.+. .....++.++++++.++++++|+....|+...+++++..... ..+++++++ +|
T Consensus 158 ~~~~~i~vIpngvd~~~~~~~-~~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~~l~~----~~p~~~lvi-vG 231 (380)
T PRK15484 158 LPNADISIVPNGFCLETYQSN-PQPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFEKLAT----AHSNLKLVV-VG 231 (380)
T ss_pred CCCCCEEEecCCCCHHHcCCc-chHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHHHHHH----hCCCeEEEE-Ee
Confidence 466789999999998766543 244567788888777888888887777888888877765443 256777544 45
Q ss_pred CCH--------HHHHHHHcC--CCCCCEEEecCh--hhHHHHHhhcCeEEECC----C-hHHHHHHHHhCCcEEEeccCC
Q 036427 394 RNK--------KLANKLLST--DWKIPVQVKGFV--SKMEEAMGACDCIITKA----G-PGTIAEAMIRGLPIILNDFIA 456 (536)
Q Consensus 394 ~~~--------~l~~~l~~~--~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s----G-~~tllEAma~GlPVI~~~~~~ 456 (536)
.+. .+.+.+++. ....++.|+|++ +++.++|+.||++|+|| | |++++|||+||+|||+++.++
T Consensus 232 ~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg 311 (380)
T PRK15484 232 DPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG 311 (380)
T ss_pred CCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCC
Confidence 432 122233222 234689999997 48999999999999998 2 799999999999999999755
Q ss_pred ccccCChhhHhhC-Cceeec---CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHHhhc
Q 036427 457 GQEAGNVPYVVEN-GCGKFS---KSPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 457 ~~e~~na~~lv~~-g~g~~~---~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~l~~~~ 526 (536)
..| ++.+ ..|..+ .|+++++++|..+++ |++. .+|++++++.+ +.++|+++++.++++++++
T Consensus 312 ~~E------iv~~~~~G~~l~~~~d~~~la~~I~~ll~-d~~~-~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 312 ITE------FVLEGITGYHLAEPMTSDSIISDINRTLA-DPEL-TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred cHh------hcccCCceEEEeCCCCHHHHHHHHHHHHc-CHHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 443 4544 456533 389999999999999 8885 77999999865 6799999999999998764
No 54
>PLN02939 transferase, transferring glycosyl groups
Probab=99.91 E-value=1.9e-21 Score=215.21 Aligned_cols=282 Identities=15% Similarity=0.076 Sum_probs=193.6
Q ss_pred HHHHHHHHHHh--hCCCEEEEcCcccchH-HHHHHHH--cCCCCCceEEEEecCCCC--c-----------------ccc
Q 036427 234 IAREVAKGLMK--YQPDIIISVHPLMQHV-PLRILRA--KGLLKKIVFTTVITDLST--C-----------------HPT 289 (536)
Q Consensus 234 ~~~~l~~~l~~--~kPDvVi~~~~~~~~i-~~~~~~~--~g~~~~ip~v~~~~d~~~--~-----------------~~~ 289 (536)
+.+...+++.+ ++|||||+|..-...+ |++.... .+. .+++.+..+|.+.. . .+.
T Consensus 596 FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~-~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d 674 (977)
T PLN02939 596 FSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGF-NSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPD 674 (977)
T ss_pred HHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccC-CCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChh
Confidence 44555566665 6999999987554443 3332111 232 34787777765431 0 010
Q ss_pred cc--------------cccCCEEEEcCHHHHHHHHHh---------CCCCCCEEEeCCCCCCCCCCCCCc----------
Q 036427 290 WF--------------HKLVTRCYCPTADVAKRAMKA---------GLQASQIKVYGLPVRPSFVKPVRP---------- 336 (536)
Q Consensus 290 ~~--------------~~~~d~vi~~S~~~~~~l~~~---------g~~~~ki~vignpv~~~~~~~~~~---------- 336 (536)
++ ...+|.|+++|+..++.+... +..+.++.+|+|++|.+.+.|..+
T Consensus 675 ~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~ 754 (977)
T PLN02939 675 RMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNAN 754 (977)
T ss_pred hhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChh
Confidence 10 125799999999999987652 234678999999999987765532
Q ss_pred --------hHHHHHHcCCCC---CCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH------HHH
Q 036427 337 --------KVELRRELGMDE---DLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK------KLA 399 (536)
Q Consensus 337 --------~~~~r~~lgi~~---~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~------~l~ 399 (536)
+..+++++|++. +.++|+++|+....|++..++.++...+. ++.++ +++|.|+ .+.
T Consensus 755 dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~------~dvqL-VIvGdGp~~~~e~eL~ 827 (977)
T PLN02939 755 DLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE------LGGQF-VLLGSSPVPHIQREFE 827 (977)
T ss_pred hhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh------cCCEE-EEEeCCCcHHHHHHHH
Confidence 456889999974 46888899998888888877777755432 35665 5567663 223
Q ss_pred HHHHcCCCCCCEEEecChhh--HHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccC---ChhhH-hhC
Q 036427 400 NKLLSTDWKIPVQVKGFVSK--MEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAG---NVPYV-VEN 469 (536)
Q Consensus 400 ~~l~~~~~~~~V~~~G~v~~--l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~---na~~l-v~~ 469 (536)
+..+.+...++|.|+|+.++ ...+|+.||++|+|| + |++++|||+||+|+|+++.++..+.- +...+ .+.
T Consensus 828 ~La~~l~l~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg 907 (977)
T PLN02939 828 GIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVEL 907 (977)
T ss_pred HHHHHcCCCCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCC
Confidence 33444566778999998864 357999999999998 3 89999999999999999877654420 00001 112
Q ss_pred CceeecC--CHHHHHHHHHHHhC---CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 470 GCGKFSK--SPKEIANMVSQWFG---PKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 470 g~g~~~~--d~~~La~~I~~ll~---~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
+.|+++. |+++|+++|.+++. .+++.+++|++++.. ..++|+++++.+.+++++
T Consensus 908 ~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A~qYeeLY~~ 966 (977)
T PLN02939 908 RNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSASQYEELYQR 966 (977)
T ss_pred CceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHH
Confidence 4566664 89999998887653 278999999987653 678999999888776653
No 55
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.91 E-value=5.1e-22 Score=213.94 Aligned_cols=277 Identities=19% Similarity=0.168 Sum_probs=192.2
Q ss_pred HHHHHHHHHHh--hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC--ccc---------------------
Q 036427 234 IAREVAKGLMK--YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST--CHP--------------------- 288 (536)
Q Consensus 234 ~~~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~--~~~--------------------- 288 (536)
+.....+++++ .+||+||++......++..+.+..+.. ++|++..+|++.. ..+
T Consensus 114 f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~-~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 192 (473)
T TIGR02095 114 FSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPN-PIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEF 192 (473)
T ss_pred HHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCC-CCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhc
Confidence 34455555554 689999999754433344333333211 3788877775431 000
Q ss_pred -------ccccccCCEEEEcCHHHHHHHHHh----CC------CCCCEEEeCCCCCCCCCCCCCc---------------
Q 036427 289 -------TWFHKLVTRCYCPTADVAKRAMKA----GL------QASQIKVYGLPVRPSFVKPVRP--------------- 336 (536)
Q Consensus 289 -------~~~~~~~d~vi~~S~~~~~~l~~~----g~------~~~ki~vignpv~~~~~~~~~~--------------- 336 (536)
+...+.+|.++++|+..++.+... ++ ++.++.+++|++|.+.+.+..+
T Consensus 193 ~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k 272 (473)
T TIGR02095 193 YGRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGK 272 (473)
T ss_pred CCchHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhh
Confidence 112467899999999998887642 22 3568999999999887765321
Q ss_pred ---hHHHHHHcCCCC--CCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcC--CCC
Q 036427 337 ---KVELRRELGMDE--DLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLST--DWK 408 (536)
Q Consensus 337 ---~~~~r~~lgi~~--~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~--~~~ 408 (536)
+..+++++|++. +.++++++|+....|++..+++++.+... .++++ +++|.++ ++.+.++++ ...
T Consensus 273 ~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~------~~~~l-vi~G~g~~~~~~~l~~~~~~~~ 345 (473)
T TIGR02095 273 AENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLE------LGGQL-VVLGTGDPELEEALRELAERYP 345 (473)
T ss_pred hhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHH------cCcEE-EEECCCCHHHHHHHHHHHHHCC
Confidence 345788899976 67889999998888888877777765432 34665 5567763 333333322 233
Q ss_pred CCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC------CceeecC
Q 036427 409 IPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN------GCGKFSK 476 (536)
Q Consensus 409 ~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~------g~g~~~~ 476 (536)
.++.+.+.. +++..+|+.||++++|| + |.+++|||+||+|+|+++.++..+. +.+. +.|++++
T Consensus 346 ~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~-----v~~~~~~~~~~~G~l~~ 420 (473)
T TIGR02095 346 GNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADT-----VVDGDPEAESGTGFLFE 420 (473)
T ss_pred CcEEEEEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccce-----EecCCCCCCCCceEEeC
Confidence 567776554 35678999999999998 3 7999999999999999997665442 3333 6677764
Q ss_pred --CHHHHHHHHHHHhC---CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 477 --SPKEIANMVSQWFG---PKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 477 --d~~~La~~I~~ll~---~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|+++++++|.+++. .+++.+++|++++. .+.++|+++++.+.+++++
T Consensus 421 ~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 421 EYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHHh
Confidence 89999999988775 26788899998885 3679999999999988764
No 56
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.91 E-value=3.3e-21 Score=197.16 Aligned_cols=347 Identities=18% Similarity=0.162 Sum_probs=226.3
Q ss_pred EEEEeCC--C--CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 147 VLILMSD--T--GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 147 IL~~~~~--~--GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
|||++.. . .||+......++++|.+. |++|.+.+................ .......... ...
T Consensus 1 iLii~~~~p~~~~~g~~~~~~~~~~~l~~~---g~~v~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~------~~~ 67 (377)
T cd03798 1 ILVISSLYPPPNNGGGGIFVKELARALAKR---GVEVTVLAPGPWGPKLLDLLKGRL----VGVERLPVLL------PVV 67 (377)
T ss_pred CeEeccCCCCCCCchHHHHHHHHHHHHHHC---CCceEEEecCCCCCCchhhccccc----ccccccccCc------chh
Confidence 4566532 2 489999999999999988 788877754332111100000000 0000000000 000
Q ss_pred cchhhhhhhHHHHHHHHHHHH--hhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCCCcc----------cc
Q 036427 223 HQSNFAATSTFIAREVAKGLM--KYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLSTCH----------PT 289 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~--~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~~~~----------~~ 289 (536)
...............+.+.++ ..+||+|+++.+...... ....+..+ +|++...++..... .+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~~~----~~~i~~~h~~~~~~~~~~~~~~~~~~ 143 (377)
T cd03798 68 PLLKGPLLYLLAARALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRKLG----IPLVVTLHGSDVNLLPRKRLLRALLR 143 (377)
T ss_pred hccccchhHHHHHHHHHHHHhcccCCCCEEEEeccchHHHHHHHHHHhcC----CCEEEEeecchhcccCchhhHHHHHH
Confidence 000011123345567778888 999999999876544322 22223222 78877666543211 12
Q ss_pred cccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHH
Q 036427 290 WFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATA 369 (536)
Q Consensus 290 ~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l 369 (536)
+..+.+|.+++.|+..++.+.+.+.+..++.+++++++...+.+...... .++....+.+.++++|+....++...++
T Consensus 144 ~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~g~~~~~k~~~~li 221 (377)
T cd03798 144 RALRRADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFSPADRAEA--RKLGLPEDKKVILFVGRLVPRKGIDYLI 221 (377)
T ss_pred HHHhcCCeEEeCCHHHHHHHHHhcCCCCceEEcCCCcCcccCCCcchHHH--HhccCCCCceEEEEeccCccccCHHHHH
Confidence 34678999999999999999887777889999999999887665432222 3445556677788888877777777777
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC----ChHHHH
Q 036427 370 RALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA----GPGTIA 440 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s----G~~tll 440 (536)
+++..... ..+++++ +++|.+. .+.+.++..+...+|.+.|++ +++.++|..||+++.++ +|.+++
T Consensus 222 ~~~~~~~~----~~~~~~l-~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~ 296 (377)
T cd03798 222 EALARLLK----KRPDVHL-VIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLL 296 (377)
T ss_pred HHHHHHHh----cCCCeEE-EEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHH
Confidence 66654432 2355654 5567654 334555556777899999998 47899999999999987 389999
Q ss_pred HHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHh-cCCchHHHHHH
Q 036427 441 EAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKL-ARPDAVFRIVQ 517 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~-a~~~~~~~i~~ 517 (536)
|||++|+|+|+++.++..+ .+.+.+.|.++. |+++++++|.++++ +++. ++..++++. .+.++++.+++
T Consensus 297 Ea~~~G~pvI~~~~~~~~~-----~~~~~~~g~~~~~~~~~~l~~~i~~~~~-~~~~--~~~~~~~~~~~~~~s~~~~~~ 368 (377)
T cd03798 297 EAMACGLPVVATDVGGIPE-----IITDGENGLLVPPGDPEALAEAILRLLA-DPWL--RLGRAARRRVAERFSWENVAE 368 (377)
T ss_pred HHHhcCCCEEEecCCChHH-----HhcCCcceeEECCCCHHHHHHHHHHHhc-CcHH--HHhHHHHHHHHHHhhHHHHHH
Confidence 9999999999988654333 233444456654 89999999999999 8776 566666554 45688999999
Q ss_pred HHHHHHhh
Q 036427 518 DLHELVRQ 525 (536)
Q Consensus 518 ~i~~l~~~ 525 (536)
.+.+++++
T Consensus 369 ~~~~~~~~ 376 (377)
T cd03798 369 RLLELYRE 376 (377)
T ss_pred HHHHHHhh
Confidence 99888764
No 57
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.91 E-value=4.5e-22 Score=204.69 Aligned_cols=331 Identities=16% Similarity=0.143 Sum_probs=218.8
Q ss_pred eEEEEeCC----CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 146 KVLILMSD----TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 146 KIL~~~~~----~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
||+|.+.. ..||..+.+..|+++|.+. ++++.+................ . ... .+.... ...
T Consensus 1 ~ili~~~~~~~~~~gG~~~~~~~l~~~L~~~---~~~v~~~~~~~~~~~~~~~~~~-~----~~~--~~~~~~----~~~ 66 (365)
T cd03809 1 RILIDARFLASRRPTGIGRYARELLRALLKL---DPEEVLLLLPGAPGLLLLPLRA-A----LRL--LLRLPR----RLL 66 (365)
T ss_pred CEEEechhhhcCCCCcHHHHHHHHHHHHHhc---CCceEEEEecCccccccccchh-c----ccc--cccccc----ccc
Confidence 67877622 3589999999999999997 5555444322111110000000 0 000 000000 000
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc-c------------
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH-P------------ 288 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~-~------------ 288 (536)
. .............+.+.+||+||++....... +.. ++|++...+|+.... +
T Consensus 67 ~------~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~-----~~~----~~~~i~~~hd~~~~~~~~~~~~~~~~~~~ 131 (365)
T cd03809 67 W------GLLFLLRAGDRLLLLLLGLDLLHSPHNTAPLL-----RLR----GVPVVVTIHDLIPLRFPEYFSPGFRRYFR 131 (365)
T ss_pred c------chhhHHHHHHHHHhhhcCCCeeeecccccCcc-----cCC----CCCEEEEeccchhhhCcccCCHHHHHHHH
Confidence 0 01111122334445668999999988654321 222 388888877754211 0
Q ss_pred ---ccccccCCEEEEcCHHHHHHHHHh-CCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCc
Q 036427 289 ---TWFHKLVTRCYCPTADVAKRAMKA-GLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGP 364 (536)
Q Consensus 289 ---~~~~~~~d~vi~~S~~~~~~l~~~-g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~ 364 (536)
....+.+|.++++|+..++.+.+. +.+..++.+++++++...+....... +.......+.+.++++|+....++
T Consensus 132 ~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~G~~~~~K~ 209 (365)
T cd03809 132 RLLRRALRRADAIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAE--VLRALYLLPRPYFLYVGTIEPRKN 209 (365)
T ss_pred HHHHHHHHHcCEEEEccHHHHHHHHHHhCcCHHHEEeeccccCccccCCCchHH--HHHHhcCCCCCeEEEeCCCccccC
Confidence 223567899999999999998875 45678899999999988765543222 334445566778888888777777
Q ss_pred HHHHHHHHHHHhhhcccCCCCcEEEEEecCCH----HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C
Q 036427 365 IEATARALGNALYDENLGEPIGQVLVICGRNK----KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G 435 (536)
Q Consensus 365 ~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~----~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G 435 (536)
...+++++..... ..++.++ +++|.+. ...+.+++.+...+|++.|++ +++.++|+.||+++.|+ |
T Consensus 210 ~~~~l~~~~~~~~----~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~ 284 (365)
T cd03809 210 LERLLEAFARLPA----KGPDPKL-VIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEG 284 (365)
T ss_pred HHHHHHHHHHHHH----hcCCCCE-EEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccchhcc
Confidence 7777777765443 2334555 4445433 222333456778899999999 58999999999999997 3
Q ss_pred -hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeec--CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchH
Q 036427 436 -PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS--KSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAV 512 (536)
Q Consensus 436 -~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~--~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~ 512 (536)
+++++|||++|+|||+++.++..+ ++.. .|.++ .|+++++++|.++++ +++.+.+|++++++.+..++|
T Consensus 285 ~~~~~~Ea~a~G~pvI~~~~~~~~e------~~~~-~~~~~~~~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~sw 356 (365)
T cd03809 285 FGLPVLEAMACGTPVIASNISSLPE------VAGD-AALYFDPLDPEALAAAIERLLE-DPALREELRERGLARAKRFSW 356 (365)
T ss_pred CCCCHHHHhcCCCcEEecCCCCccc------eecC-ceeeeCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhCCH
Confidence 889999999999999998755444 3322 23333 489999999999999 999999999999998999999
Q ss_pred HHHHHHHH
Q 036427 513 FRIVQDLH 520 (536)
Q Consensus 513 ~~i~~~i~ 520 (536)
+++++.+.
T Consensus 357 ~~~~~~~~ 364 (365)
T cd03809 357 EKTARRTL 364 (365)
T ss_pred HHHHHHHh
Confidence 99998875
No 58
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.90 E-value=2.1e-21 Score=199.86 Aligned_cols=328 Identities=15% Similarity=0.101 Sum_probs=210.9
Q ss_pred eEEEEeCC---CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 146 KVLILMSD---TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 146 KIL~~~~~---~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
|||+++.. -.||....+..|+++|.+. |++|.+.......... .+ .....+......... ..
T Consensus 1 kil~i~~~~~p~~gG~~~~~~~l~~~L~~~---g~~v~v~~~~~~~~~~-------~~--~~~~~~~~~~~~~~~--~~- 65 (357)
T cd03795 1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAAR---GIEVAVLCASPEPKGR-------DE--ERNGHRVIRAPSLLN--VA- 65 (357)
T ss_pred CeeEecCCCCCCCCcHHHHHHHHHHHHHhC---CCceEEEecCCCCcch-------hh--hccCceEEEeecccc--cc-
Confidence 68887632 1379999999999999998 7777776543221110 00 000001111000000 00
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCCC---------ccccccc
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLST---------CHPTWFH 292 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~---------~~~~~~~ 292 (536)
.. .........+. ++..+||+||++.+............. ++|.+...+ +... ...+++.
T Consensus 66 --~~--~~~~~~~~~~~--~~~~~~Dii~~~~~~~~~~~~~~~~~~----~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~ 135 (357)
T cd03795 66 --ST--PFSPSFFKQLK--KLAKKADVIHLHFPNPLADLALLLLPR----KKPVVVHWHSDIVKQKLLLKLYRPLQRRFL 135 (357)
T ss_pred --cc--cccHHHHHHHH--hcCCCCCEEEEecCcchHHHHHHHhcc----CceEEEEEcChhhccchhhhhhhHHHHHHH
Confidence 00 00111111111 567899999998876533222222211 366664444 3211 1113456
Q ss_pred ccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHH
Q 036427 293 KLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARAL 372 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al 372 (536)
+.+|.+++.|+...+.+...+..+.++.+++|+++...+.+...... .....+.+.+.++++|+....++...+++++
T Consensus 136 ~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~gi~~~~~~~~~~~~~--~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 213 (357)
T cd03795 136 RRADAIVATSPNYAETSPVLRRFRDKVRVIPLGLDPARYPRPDALEE--AIWRRAAGRPFFLFVGRLVYYKGLDVLLEAA 213 (357)
T ss_pred HhcCEEEeCcHHHHHHHHHhcCCccceEEecCCCChhhcCCcchhhh--HhhcCCCCCcEEEEecccccccCHHHHHHHH
Confidence 78999999999999987765444478999999999876654322111 2233455677888888877777777766666
Q ss_pred HHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChh--hHHHHHhhcCeEEECC-----C-hHHHHH
Q 036427 373 GNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVS--KMEEAMGACDCIITKA-----G-PGTIAE 441 (536)
Q Consensus 373 ~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~s-----G-~~tllE 441 (536)
.+. .++.+ +++|.++ .+.+.+++.+...+|++.|+++ ++.++|+.||++++|+ | |.+++|
T Consensus 214 ~~l--------~~~~l-~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~E 284 (357)
T cd03795 214 AAL--------PDAPL-VIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLE 284 (357)
T ss_pred Hhc--------cCcEE-EEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHH
Confidence 532 14554 5557665 3344454667788999999985 6899999999999886 3 889999
Q ss_pred HHHhCCcEEEeccCCccccCChhhHhh-CCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC-chHHHH
Q 036427 442 AMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARP-DAVFRI 515 (536)
Q Consensus 442 Ama~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~-~~~~~i 515 (536)
||++|+|||+++.++..+. +.+ .+.|.++. |+++++++|..+++ +++.+++|++++++.+.+ ++++.+
T Consensus 285 a~~~g~Pvi~~~~~~~~~~-----i~~~~~~g~~~~~~d~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~ 356 (357)
T cd03795 285 AMAFGKPVISTEIGTGGSY-----VNLHGVTGLVVPPGDPAALAEAIRRLLE-DPELRERLGEAARERAEEEFTADRM 356 (357)
T ss_pred HHHcCCCEEecCCCCchhH-----HhhCCCceEEeCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHhcchHhh
Confidence 9999999999987655443 444 56677664 89999999999999 999999999999998754 565554
No 59
>PRK14098 glycogen synthase; Provisional
Probab=99.90 E-value=2.5e-21 Score=208.36 Aligned_cols=280 Identities=17% Similarity=0.134 Sum_probs=192.1
Q ss_pred HHHHHHHHHh--hCCCEEEEcCcccchHHHHHHHHc---CCCCCceEEEEecCCCCc-----------cc----------
Q 036427 235 AREVAKGLMK--YQPDIIISVHPLMQHVPLRILRAK---GLLKKIVFTTVITDLSTC-----------HP---------- 288 (536)
Q Consensus 235 ~~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~~---g~~~~ip~v~~~~d~~~~-----------~~---------- 288 (536)
.+...+++++ ++||+||+|.-....+|+.+.++. ....++|++..+|..... .+
T Consensus 128 ~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~ 207 (489)
T PRK14098 128 NVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHRE 207 (489)
T ss_pred HHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhc
Confidence 3444455554 689999999633333344443322 112358988776653210 00
Q ss_pred -------ccccccCCEEEEcCHHHHHHHHHh-----CCC------CCCEEEeCCCCCCCCCCCCCc--------------
Q 036427 289 -------TWFHKLVTRCYCPTADVAKRAMKA-----GLQ------ASQIKVYGLPVRPSFVKPVRP-------------- 336 (536)
Q Consensus 289 -------~~~~~~~d~vi~~S~~~~~~l~~~-----g~~------~~ki~vignpv~~~~~~~~~~-------------- 336 (536)
+.....+|.++++|+..++.+... |++ +.++.+|+|++|.+.+.+..+
T Consensus 208 ~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~ 287 (489)
T PRK14098 208 GDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDG 287 (489)
T ss_pred CCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhh
Confidence 012367899999999999987652 443 578999999999987765432
Q ss_pred ----hHHHHHHcCCC--CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcC--CC
Q 036427 337 ----KVELRRELGMD--EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLST--DW 407 (536)
Q Consensus 337 ----~~~~r~~lgi~--~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~--~~ 407 (536)
+..+++++|++ ++.++++++|+....|++..+++++.+... +++++ +++|.++ ++.+.++++ ..
T Consensus 288 k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~------~~~~l-vivG~G~~~~~~~l~~l~~~~ 360 (489)
T PRK14098 288 KLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE------LDIQL-VICGSGDKEYEKRFQDFAEEH 360 (489)
T ss_pred HHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh------cCcEE-EEEeCCCHHHHHHHHHHHHHC
Confidence 33567788886 356788888888888888877777765432 35665 5556664 233333322 23
Q ss_pred CCCEEEecChh--hHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHH
Q 036427 408 KIPVQVKGFVS--KMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPK 479 (536)
Q Consensus 408 ~~~V~~~G~v~--~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~ 479 (536)
..+|.+.|..+ ++..+|+.||++++|| + |++.+|||+||+|+|+++.++..+. ......+.+.|++++ |++
T Consensus 361 ~~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~-v~~~~~~~~~G~l~~~~d~~ 439 (489)
T PRK14098 361 PEQVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVET-IEEVSEDKGSGFIFHDYTPE 439 (489)
T ss_pred CCCEEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCcee-eecCCCCCCceeEeCCCCHH
Confidence 46899999874 5689999999999998 3 8999999999999999987665442 000011245677764 899
Q ss_pred HHHHHHHHHh---CCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 480 EIANMVSQWF---GPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 480 ~La~~I~~ll---~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
+|+++|.+++ + +++.+++|++++. .+.++|+++++++.+++++
T Consensus 440 ~la~ai~~~l~~~~-~~~~~~~~~~~~~--~~~fsw~~~a~~y~~lY~~ 485 (489)
T PRK14098 440 ALVAKLGEALALYH-DEERWEELVLEAM--ERDFSWKNSAEEYAQLYRE 485 (489)
T ss_pred HHHHHHHHHHHHHc-CHHHHHHHHHHHh--cCCCChHHHHHHHHHHHHH
Confidence 9999998754 6 7888888887663 4689999999999988865
No 60
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.90 E-value=1.6e-21 Score=203.13 Aligned_cols=344 Identities=17% Similarity=0.159 Sum_probs=217.4
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||+++++.. -+..-...+.++|.+..+-+++++++.... +....... .....+-+.+.... . .
T Consensus 1 ~~i~~~~gtr--~~~~~~~p~~~~l~~~~~~~~~~~~tg~h~-------~~~~~~~~-~~~i~~~~~~~~~~-~-----~ 64 (365)
T TIGR00236 1 LKVSIVLGTR--PEAIKMAPLIRALKKYPEIDSYVIVTAQHR-------EMLDQVLD-LFHLPPDYDLNIMS-P-----G 64 (365)
T ss_pred CeEEEEEecC--HHHHHHHHHHHHHhhCCCCCEEEEEeCCCH-------HHHHHHHH-hcCCCCCeeeecCC-C-----C
Confidence 6999988775 667777788899987521133433332210 00100000 00111101100000 0 0
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchH-HHHHHHHcCCCCCceEEEEecCCC---Cc-------ccccccc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHV-PLRILRAKGLLKKIVFTTVITDLS---TC-------HPTWFHK 293 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i-~~~~~~~~g~~~~ip~v~~~~d~~---~~-------~~~~~~~ 293 (536)
............++.+++++++||+||+++.....+ ...+++..| +|++.+..... .. .+.++.+
T Consensus 65 ~~~~~~~~~~~~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~~~----ipv~h~~~g~~s~~~~~~~~~~~~r~~~~~ 140 (365)
T TIGR00236 65 QTLGEITSNMLEGLEELLLEEKPDIVLVQGDTTTTLAGALAAFYLQ----IPVGHVEAGLRTGDRYSPMPEEINRQLTGH 140 (365)
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHhC----CCEEEEeCCCCcCCCCCCCccHHHHHHHHH
Confidence 011112233446888999999999999998765433 233445555 89876543211 00 1223456
Q ss_pred cCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCC-C-CCchHHHHHHcCCCCCCCEEEEecCCCCC--CcHHHHH
Q 036427 294 LVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVK-P-VRPKVELRRELGMDEDLPAVLLMGGGEGM--GPIEATA 369 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~-~-~~~~~~~r~~lgi~~~~~~il~~gg~~g~--k~~~~~l 369 (536)
.+|.++++++..++.+.+.|++++++.++||++.+.... . ......++++++. +.++++++++.... ++...++
T Consensus 141 ~ad~~~~~s~~~~~~l~~~G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~~--~~~~vl~~~hr~~~~~k~~~~ll 218 (365)
T TIGR00236 141 IADLHFAPTEQAKDNLLRENVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFGE--DKRYILLTLHRRENVGEPLENIF 218 (365)
T ss_pred HHHhccCCCHHHHHHHHHcCCCcccEEEeCChHHHHHHHHHhhccchhHHHhcCC--CCCEEEEecCchhhhhhHHHHHH
Confidence 789999999999999999999999999999997443221 1 1113455666652 34577777654321 3344455
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHH-cCCCCCCEEEecChh--hHHHHHhhcCeEEECCChHHHHHHHHhC
Q 036427 370 RALGNALYDENLGEPIGQVLVICGRNKKLANKLL-STDWKIPVQVKGFVS--KMEEAMGACDCIITKAGPGTIAEAMIRG 446 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~-~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~sG~~tllEAma~G 446 (536)
+++.+... ..++.+++++.+.+.+..+.+. ..+..++|.+++.++ ++..+|+.||+++++||+. ++|||++|
T Consensus 219 ~a~~~l~~----~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~Sg~~-~~EA~a~g 293 (365)
T TIGR00236 219 KAIREIVE----EFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDSGGV-QEEAPSLG 293 (365)
T ss_pred HHHHHHHH----HCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECChhH-HHHHHHcC
Confidence 55443322 2456766555454443333232 234456899998764 6788999999999999754 69999999
Q ss_pred CcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 447 LPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 447 lPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
+|+|+++..++.+ .+++.|.++++. |++++++++.++++ +++.+++|+++...+.+.+++++|++.|.+
T Consensus 294 ~PvI~~~~~~~~~-----e~~~~g~~~lv~~d~~~i~~ai~~ll~-~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 294 KPVLVLRDTTERP-----ETVEAGTNKLVGTDKENITKAAKRLLT-DPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred CCEEECCCCCCCh-----HHHhcCceEEeCCCHHHHHHHHHHHHh-ChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 9999986444333 266677777775 99999999999999 999999999888777778899999998876
No 61
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.90 E-value=2.6e-21 Score=204.98 Aligned_cols=349 Identities=12% Similarity=0.023 Sum_probs=212.3
Q ss_pred eEEEEeC--CCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCC-CCCCcchhHHHH-HHhhcccccee-e-cCCCc
Q 036427 146 KVLILMS--DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTP-WPFNQLPRSYNF-LVKHGPLWKMT-Y-YGTAP 219 (536)
Q Consensus 146 KIL~~~~--~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~-~~~~~~~~~y~~-~~~~~~l~~~~-~-~~~~~ 219 (536)
.|.|+.+ +.|||.++.....+.+|.++ +.+++|.+.+...+... .........+.. .......+... . .....
T Consensus 2 ~~~f~hp~~~~ggg~ervl~~a~~~l~~~-~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 80 (419)
T cd03806 2 TVGFFHPYCNAGGGGERVLWCAVRALQKR-YPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEA 80 (419)
T ss_pred eEEEECCCCCCCCCchHHHHHHHHHHHHh-CCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeecc
Confidence 4677764 57789999999999999998 44678877765432210 000000000000 00000101100 0 00011
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCC----C-c--------
Q 036427 220 RVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLS----T-C-------- 286 (536)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~----~-~-------- 286 (536)
..+.+...............+.+.+.+||+|+.+.++...+|+ ++... +.|++.++| +. . .
T Consensus 81 ~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~--~~~~~---~~~~i~y~h-~P~~~~d~l~~~~~~~~ 154 (419)
T cd03806 81 STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPL--VRLLG---GCPVGAYVH-YPTISTDMLQKVRSREA 154 (419)
T ss_pred ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHH--HHHhc---CCeEEEEec-CCcchHHHHHHHhhccc
Confidence 1111111111111111122223345689999988766554443 33322 368877766 21 0 0
Q ss_pred ---------------------------ccccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHH
Q 036427 287 ---------------------------HPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVE 339 (536)
Q Consensus 287 ---------------------------~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~ 339 (536)
...|..+.+|.++++|+..++.+.+.+....++.++++|++.+.+.+...
T Consensus 155 ~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~--- 231 (419)
T cd03806 155 SYNNSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPL--- 231 (419)
T ss_pred cccCccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhccccc---
Confidence 11234578999999999999998876433458999999998665432211
Q ss_pred HHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhccc-CCCCcEEEEEecCCH---------HHHHHHHcCCCCC
Q 036427 340 LRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENL-GEPIGQVLVICGRNK---------KLANKLLSTDWKI 409 (536)
Q Consensus 340 ~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~-~~~~~~~lvi~G~~~---------~l~~~l~~~~~~~ 409 (536)
...++.+.++++|+....|+...+++++......... ..+++++++ +|.+. ++++..+++++.+
T Consensus 232 -----~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvi-vG~~~~~~~~~~~~~L~~~~~~l~l~~ 305 (419)
T cd03806 232 -----DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVL-IGSCRNEDDEKRVEDLKLLAKELGLED 305 (419)
T ss_pred -----ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEE-EcCCCCcccHHHHHHHHHHHHHhCCCC
Confidence 0123456888999888888888888888755431100 012466544 45431 2344455667888
Q ss_pred CEEEecCh--hhHHHHHhhcCeEEECC----ChHHHHHHHHhCCcEEEeccCCccccCChhhHhh----CCceeecCCHH
Q 036427 410 PVQVKGFV--SKMEEAMGACDCIITKA----GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE----NGCGKFSKSPK 479 (536)
Q Consensus 410 ~V~~~G~v--~~l~~ll~~aDv~V~~s----G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~----~g~g~~~~d~~ 479 (536)
+|+|+|++ +++.++|+.||++|+++ .|.+++|||+||+|+|+++.++..++ +++ ..+|++++|++
T Consensus 306 ~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~-----iv~~~~~g~~G~l~~d~~ 380 (419)
T cd03806 306 KVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLD-----IVVPWDGGPTGFLASTAE 380 (419)
T ss_pred eEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchh-----eeeccCCCCceEEeCCHH
Confidence 99999997 58999999999999987 38999999999999999986543222 554 56788888999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHH
Q 036427 480 EIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRI 515 (536)
Q Consensus 480 ~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i 515 (536)
+++++|.++++++++.++.+++++++..+.+++++.
T Consensus 381 ~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~f 416 (419)
T cd03806 381 EYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEEF 416 (419)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHHh
Confidence 999999999983345566666666666666776654
No 62
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.90 E-value=5.6e-21 Score=197.32 Aligned_cols=331 Identities=16% Similarity=0.155 Sum_probs=210.2
Q ss_pred eEEEEeC----CCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 146 KVLILMS----DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 146 KIL~~~~----~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
||+|+.. ..+||....+..|++.|.++ |++|.|+......... ... ....+....... ....
T Consensus 1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~---g~~v~v~~~~~~~~~~-----~~~----~~~i~~~~~~~~--~~~~ 66 (363)
T cd04955 1 KIAIIGTRGIPAKYGGFETFVEELAPRLVAR---GHEVTVYCRSPYPKQK-----ETE----YNGVRLIHIPAP--EIGG 66 (363)
T ss_pred CeEEEecCcCCcccCcHHHHHHHHHHHHHhc---CCCEEEEEccCCCCCc-----ccc----cCCceEEEcCCC--Cccc
Confidence 6888743 34589999999999999998 7788776543221110 000 000000000000 0000
Q ss_pred ccchhhhhhhHHHHHHHHHHH-HhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc-------------
Q 036427 222 IHQSNFAATSTFIAREVAKGL-MKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH------------- 287 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l-~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~------------- 287 (536)
.. ........+.+.+ ++.++|+||...+.. ...+.+++..+ .|++...++.....
T Consensus 67 ~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~----~~~v~~~h~~~~~~~~~~~~~~~~~~~ 135 (363)
T cd04955 67 LG------TIIYDILAILHALFVKRDIDHVHALGPAI-APFLPLLRLKG----KKVVVNMDGLEWKRAKWGRPAKRYLKF 135 (363)
T ss_pred hh------hhHHHHHHHHHHHhccCCeEEEEecCccH-HHHHHHHHhcC----CCEEEEccCcceeecccccchhHHHHH
Confidence 00 0000011111222 345667777666554 21222333333 67776666532110
Q ss_pred -cccccccCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcH
Q 036427 288 -PTWFHKLVTRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPI 365 (536)
Q Consensus 288 -~~~~~~~~d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~ 365 (536)
.++..+.+|.++++|+..++.+.+ ++.+. .+++|+++...+.+ +...++.++++++ +.++++|+....|+.
T Consensus 136 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~---~~i~ngv~~~~~~~---~~~~~~~~~~~~~-~~i~~~G~~~~~Kg~ 208 (363)
T cd04955 136 GEKLAVKFADRLIADSPGIKEYLKEKYGRDS---TYIPYGADHVVSSE---EDEILKKYGLEPG-RYYLLVGRIVPENNI 208 (363)
T ss_pred HHHHHHhhccEEEeCCHHHHHHHHHhcCCCC---eeeCCCcChhhcch---hhhhHHhcCCCCC-cEEEEEecccccCCH
Confidence 022456789999999999999854 45432 79999998765543 2334555666554 457788887777888
Q ss_pred HHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHH-cCCCCCCEEEecCh--hhHHHHHhhcCeEEECC----C
Q 036427 366 EATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLL-STDWKIPVQVKGFV--SKMEEAMGACDCIITKA----G 435 (536)
Q Consensus 366 ~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~-~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s----G 435 (536)
..+++++.+.. .+.+++ ++|.++ ++.+.++ +.+..++|+++|++ +++.++|..||+++.|+ |
T Consensus 209 ~~li~a~~~l~-------~~~~l~-ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~ 280 (363)
T cd04955 209 DDLIEAFSKSN-------SGKKLV-IVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGG 280 (363)
T ss_pred HHHHHHHHhhc-------cCceEE-EEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCEEEeCCccCCC
Confidence 87777775431 256654 456542 3445554 45667899999998 47889999999999987 3
Q ss_pred -hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC-CchHH
Q 036427 436 -PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLAR-PDAVF 513 (536)
Q Consensus 436 -~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~-~~~~~ 513 (536)
|++++|||++|+|||+++.++..+ +++. .|.++...+.++++|..+++ +++.+.++++++++.+. .++++
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~~~~e------~~~~-~g~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNPFNRE------VLGD-KAIYFKVGDDLASLLEELEA-DPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CChHHHHHHHcCCCEEEecCCccce------eecC-CeeEecCchHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHH
Confidence 789999999999999999766544 3333 44555433349999999999 99999999999998875 48999
Q ss_pred HHHHHHHHHHh
Q 036427 514 RIVQDLHELVR 524 (536)
Q Consensus 514 ~i~~~i~~l~~ 524 (536)
.+++.+.++++
T Consensus 353 ~~~~~~~~~y~ 363 (363)
T cd04955 353 KIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHhC
Confidence 99999988763
No 63
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.89 E-value=7.7e-21 Score=200.20 Aligned_cols=344 Identities=11% Similarity=0.094 Sum_probs=210.7
Q ss_pred CCCceEEEEeCC----CCchHHHHHHHHHHHHHhccCCc-eEEEEeecccccC----CCC----CCc--chhHHHHHHhh
Q 036427 142 DQPKKVLILMSD----TGGGHRASAEAIKAAFHEKFGNE-YQVFVTDLWSDHT----PWP----FNQ--LPRSYNFLVKH 206 (536)
Q Consensus 142 ~~~mKIL~~~~~----~GgGh~~~~l~La~~L~~~~g~g-~eV~v~~~~~~~~----~~~----~~~--~~~~y~~~~~~ 206 (536)
.+.|||+|+|.. + +|.....+.++..|.++ | |+|+|+..+.... -++ |.. -+..|...+..
T Consensus 2 ~~~mrIaivTdt~lP~v-nGva~s~~~~a~~L~~~---G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~ 77 (462)
T PLN02846 2 QKKQHIAIFTTASLPWM-TGTAVNPLFRAAYLAKD---GDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLE 77 (462)
T ss_pred CCCCEEEEEEcCCCCCC-CCeeccHHHHHHHHHhc---CCcEEEEEecCCccccccccccccccccCchhhhhhhhhhcc
Confidence 356999999843 5 79988899999999999 7 6887764321100 011 000 01111100000
Q ss_pred c-----cccceeecCCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEE-EEe
Q 036427 207 G-----PLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFT-TVI 280 (536)
Q Consensus 207 ~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v-~~~ 280 (536)
. +.+.+.+|.. +. .. .........++.+.|++++||+||++.|+..+. +..+++.+...++ ++ +++
T Consensus 78 ~~v~r~~s~~~p~yp~--r~-~~---~~r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~-~~~g~~~~~k~~~-vV~tyH 149 (462)
T PLN02846 78 ERISFLPKFSIKFYPG--KF-ST---DKRSILPVGDISETIPDEEADIAVLEEPEHLTW-YHHGKRWKTKFRL-VIGIVH 149 (462)
T ss_pred CeEEEecccccccCcc--cc-cc---cccccCChHHHHHHHHhcCCCEEEEcCchhhhh-HHHHHHHHhcCCc-EEEEEC
Confidence 0 1111111111 00 00 001111235788899999999999999886553 1111221111124 55 677
Q ss_pred cCCCCcc--------c--------cccc-ccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHH
Q 036427 281 TDLSTCH--------P--------TWFH-KLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRE 343 (536)
Q Consensus 281 ~d~~~~~--------~--------~~~~-~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~ 343 (536)
+++..+. . .|+. ..+|.++++|....+ +.+. +....++++.+++.+.... .++.
T Consensus 150 T~y~~Y~~~~~~g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l~~~------~i~~v~GVd~~~f~~~~~~--~~~~ 220 (462)
T PLN02846 150 TNYLEYVKREKNGRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-YPRS------IICNVHGVNPKFLEIGKLK--LEQQ 220 (462)
T ss_pred CChHHHHHHhccchHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-HhhC------EEecCceechhhcCCCccc--Hhhh
Confidence 7763221 1 2222 237999999986655 4432 3334479998877654322 3333
Q ss_pred cCCCCC--CCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChh
Q 036427 344 LGMDED--LPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVS 418 (536)
Q Consensus 344 lgi~~~--~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~ 418 (536)
+. .++ .+.++++|+....|++..+++++.+... ..++++ ++++|+|+ ++++..+++++...+ |.|+.
T Consensus 221 ~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~----~~~~~~-l~ivGdGp~~~~L~~~a~~l~l~~~v-f~G~~- 292 (462)
T PLN02846 221 KN-GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQK----ELSGLE-VDLYGSGEDSDEVKAAAEKLELDVRV-YPGRD- 292 (462)
T ss_pred cC-CCCCcceEEEEEecCcccCCHHHHHHHHHHHHh----hCCCeE-EEEECCCccHHHHHHHHHhcCCcEEE-ECCCC-
Confidence 32 333 3457889998888999888888765432 235665 56678887 345555555554333 77764
Q ss_pred hHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHH
Q 036427 419 KMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKID 494 (536)
Q Consensus 419 ~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~ 494 (536)
+..++|+.+|++|.|| + |++++||||||+|||++++++. + .+.+.+.|..+.|++++++++..+++ ++.
T Consensus 293 ~~~~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~~-~-----~v~~~~ng~~~~~~~~~a~ai~~~l~-~~~ 365 (462)
T PLN02846 293 HADPLFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPSN-E-----FFKQFPNCRTYDDGKGFVRATLKALA-EEP 365 (462)
T ss_pred CHHHHHHhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCCc-c-----eeecCCceEecCCHHHHHHHHHHHHc-cCc
Confidence 5568999999999998 3 8999999999999999997652 3 25556667777899999999999998 432
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHhhc
Q 036427 495 ELKAMSQNALKLARPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 495 ~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~~ 526 (536)
+.++..++ ..++|+.+++.++++++-.
T Consensus 366 --~~~~~~a~---~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 366 --APLTDAQR---HELSWEAATERFLRVADLD 392 (462)
T ss_pred --hhHHHHHH---HhCCHHHHHHHHHHHhccC
Confidence 23333333 3889999999999988754
No 64
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.89 E-value=2.5e-20 Score=190.43 Aligned_cols=311 Identities=14% Similarity=0.060 Sum_probs=204.3
Q ss_pred ceEEEEeCC-------CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCC
Q 036427 145 KKVLILMSD-------TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGT 217 (536)
Q Consensus 145 mKIL~~~~~-------~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~ 217 (536)
|||++++.. ..||..+.+..|+++|.+. ||+|.+++............. ... ..+.
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~---g~~V~v~~~~~~~~~~~~~~~-------~~~-~~~~------ 63 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVAR---GHEVTLFASGDSKTAAPLVPV-------VPE-PLRL------ 63 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhc---CceEEEEecCCCCcccceeec-------cCC-Cccc------
Confidence 799998743 4589999999999999998 888887764332111000000 000 0000
Q ss_pred CcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCccc---cccccc
Q 036427 218 APRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHP---TWFHKL 294 (536)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~---~~~~~~ 294 (536)
...............+.+++++.+||+||++....... .++.. ++|+++..|+...... ......
T Consensus 64 -----~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~---~~~~~----~~~~v~~~h~~~~~~~~~~~~~~~~ 131 (335)
T cd03802 64 -----DAPGRDRAEAEALALAERALAAGDFDIVHNHSLHLPLP---FARPL----PVPVVTTLHGPPDPELLKLYYAARP 131 (335)
T ss_pred -----ccchhhHhhHHHHHHHHHHHhcCCCCEEEecCcccchh---hhccc----CCCEEEEecCCCCcccchHHHhhCc
Confidence 00001112233445677889999999999987654322 23322 3788766665432211 122355
Q ss_pred CCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHH
Q 036427 295 VTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGN 374 (536)
Q Consensus 295 ~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~ 374 (536)
.+.+++.|+...+.+... .++.+++|+++.+.+.+. +...+.++++|+....|+...+++++.
T Consensus 132 ~~~~~~~s~~~~~~~~~~----~~~~vi~ngvd~~~~~~~------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~- 194 (335)
T cd03802 132 DVPFVSISDAQRRPWPPL----PWVATVHNGIDLDDYPFR------------GPKGDYLLFLGRISPEKGPHLAIRAAR- 194 (335)
T ss_pred CCeEEEecHHHHhhcccc----cccEEecCCcChhhCCCC------------CCCCCEEEEEEeeccccCHHHHHHHHH-
Confidence 677889999888765432 678999999998766542 123457888888877777766665542
Q ss_pred HhhhcccCCCCcEEEEEecCCH---HHHHHHHcCC-CCCCEEEecChh--hHHHHHhhcCeEEECC----C-hHHHHHHH
Q 036427 375 ALYDENLGEPIGQVLVICGRNK---KLANKLLSTD-WKIPVQVKGFVS--KMEEAMGACDCIITKA----G-PGTIAEAM 443 (536)
Q Consensus 375 ~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~-~~~~V~~~G~v~--~l~~ll~~aDv~V~~s----G-~~tllEAm 443 (536)
..++++ ++.|.+. ...+..++.. ..++|+|.|+++ ++.++|+.+|+++.|+ | |.+++|||
T Consensus 195 --------~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAm 265 (335)
T cd03802 195 --------RAGIPL-KLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAM 265 (335)
T ss_pred --------hcCCeE-EEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHH
Confidence 234555 4556653 2222233322 467899999984 6789999999999986 3 79999999
Q ss_pred HhCCcEEEeccCCccccCChhhHhhCC-ceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHh-cCCchHHHHHHHHHH
Q 036427 444 IRGLPIILNDFIAGQEAGNVPYVVENG-CGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKL-ARPDAVFRIVQDLHE 521 (536)
Q Consensus 444 a~GlPVI~~~~~~~~e~~na~~lv~~g-~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~-a~~~~~~~i~~~i~~ 521 (536)
+||+|||+++.++..| +++++ .|.+++++++++++|..+++ .+. +++++. .+.++++++++.+.+
T Consensus 266 a~G~PvI~~~~~~~~e------~i~~~~~g~l~~~~~~l~~~l~~l~~-~~~------~~~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 266 ACGTPVIAFRRGAVPE------VVEDGVTGFLVDSVEELAAAVARADR-LDR------AACRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred hcCCCEEEeCCCCchh------heeCCCcEEEeCCHHHHHHHHHHHhc-cHH------HHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999999765444 55555 67888889999999999876 432 233333 356899999999988
Q ss_pred HH
Q 036427 522 LV 523 (536)
Q Consensus 522 l~ 523 (536)
++
T Consensus 333 ~y 334 (335)
T cd03802 333 LY 334 (335)
T ss_pred Hh
Confidence 75
No 65
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.89 E-value=2.8e-21 Score=203.49 Aligned_cols=334 Identities=13% Similarity=0.105 Sum_probs=198.7
Q ss_pred ceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccccc
Q 036427 145 KKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 145 mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 223 (536)
||||.+... -+||.++.++.|++.|.++ |++|.++-........ .. ....|....+..+.+... .+
T Consensus 1 mkil~i~~~l~~GGaeri~~~L~~~l~~~---G~~~~i~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~--------~~ 67 (405)
T PRK10125 1 MNILQFNVRLAEGGAAGVALDLHQRALQQ---GLASHFVYGYGKGGKE-SV-SHQNYPQVIKHTPRMTAM--------AN 67 (405)
T ss_pred CeEEEEEeeecCCchhHHHHHHHHHHHhc---CCeEEEEEecCCCccc-cc-ccCCcceEEEecccHHHH--------HH
Confidence 799988643 2389999999999999998 7788666432221110 00 011110000111000000 00
Q ss_pred ch---hhhhhhHHHHHHHHHHH-HhhCCCEEEEcCcc--cchHHHHH--HH--HcCCCCCceEEEEecCCCCc-------
Q 036427 224 QS---NFAATSTFIAREVAKGL-MKYQPDIIISVHPL--MQHVPLRI--LR--AKGLLKKIVFTTVITDLSTC------- 286 (536)
Q Consensus 224 ~~---~~~~~~~~~~~~l~~~l-~~~kPDvVi~~~~~--~~~i~~~~--~~--~~g~~~~ip~v~~~~d~~~~------- 286 (536)
.. .+..........+.++| ++++|||||+|... +..+.... .+ +.. ..++|+++..||.+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~-~~~~piV~TlHd~~~~tg~c~~~ 146 (405)
T PRK10125 68 IALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNH-KPDVTLVWTLHDHWSVTGRCAFT 146 (405)
T ss_pred HHHHHhcchhhcchHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcc-cCCCCEEEecccccccCCCcCCC
Confidence 00 00001112234555656 68999999998632 22222111 11 111 1248999888887631
Q ss_pred ------------------ccc---------c------c---cccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCC
Q 036427 287 ------------------HPT---------W------F---HKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSF 330 (536)
Q Consensus 287 ------------------~~~---------~------~---~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~ 330 (536)
++. | + .+.++.++++|+..++.+... ....++.+++|++|.+.
T Consensus 147 ~~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~-~~~~~i~vI~NGid~~~ 225 (405)
T PRK10125 147 DGCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSL-YGPGRCRIINNGIDMAT 225 (405)
T ss_pred cccccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHH-cCCCCEEEeCCCcCccc
Confidence 110 0 1 123467899999999987653 34578999999999643
Q ss_pred CCCCCchHHHHHHcCCCCCCCEEEEecCCC--CCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCC
Q 036427 331 VKPVRPKVELRRELGMDEDLPAVLLMGGGE--GMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWK 408 (536)
Q Consensus 331 ~~~~~~~~~~r~~lgi~~~~~~il~~gg~~--g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~ 408 (536)
+....+....+ .++++++++++|+.. ..|+...+++++... .++++ +++.|.++.. ..
T Consensus 226 ~~~~~~~~~~~----~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l-------~~~~~-L~ivG~g~~~--------~~ 285 (405)
T PRK10125 226 EAILAELPPVR----ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL-------GDKIE-LHTFGKFSPF--------TA 285 (405)
T ss_pred ccccccccccc----cCCCCCEEEEEEeccccCCccHHHHHHHHHhC-------CCCeE-EEEEcCCCcc--------cc
Confidence 22111111111 134566777777732 335566666666532 23455 4566766421 12
Q ss_pred CCEEEecCh---hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHH
Q 036427 409 IPVQVKGFV---SKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPK 479 (536)
Q Consensus 409 ~~V~~~G~v---~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~ 479 (536)
.++.+.|+. .++.++|+.||++|+|| | |++++||||||+|||+++.++.+| +++.+.|.+++ |++
T Consensus 286 ~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~E------iv~~~~G~lv~~~d~~ 359 (405)
T PRK10125 286 GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAARE------VLQKSGGKTVSEEEVL 359 (405)
T ss_pred cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHH------hEeCCcEEEECCCCHH
Confidence 368888876 47889999999999999 4 999999999999999999765443 66666788775 899
Q ss_pred HHHHHHHHHhCCCHHHHHH-H---HHHHHHhc-CCchHHHHHHHHHHHHhh
Q 036427 480 EIANMVSQWFGPKIDELKA-M---SQNALKLA-RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 480 ~La~~I~~ll~~d~~~~~~-m---~~~a~~~a-~~~~~~~i~~~i~~l~~~ 525 (536)
+|++.+ +++.+++ + .+++++.+ ..++++.+++++.+++++
T Consensus 360 ~La~~~------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~ 404 (405)
T PRK10125 360 QLAQLS------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQN 404 (405)
T ss_pred HHHhcc------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 998753 4444443 2 24466554 569999999999988764
No 66
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.89 E-value=2.2e-20 Score=201.44 Aligned_cols=277 Identities=19% Similarity=0.172 Sum_probs=188.8
Q ss_pred HHHHHHHHHHh--hCCCEEEEcCcccchHHHHHHHHcC--CCCCceEEEEecCCCCcc--c-------------------
Q 036427 234 IAREVAKGLMK--YQPDIIISVHPLMQHVPLRILRAKG--LLKKIVFTTVITDLSTCH--P------------------- 288 (536)
Q Consensus 234 ~~~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~~g--~~~~ip~v~~~~d~~~~~--~------------------- 288 (536)
+.+...+++++ .+||+||++......++..+.+... ...++|++..+|++.... +
T Consensus 115 f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 194 (476)
T cd03791 115 FSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDG 194 (476)
T ss_pred HHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcc
Confidence 34455566665 7999999987543333333333210 012488888877653100 0
Q ss_pred ----------ccccccCCEEEEcCHHHHHHHHHh----------CCCCCCEEEeCCCCCCCCCCCCCc------------
Q 036427 289 ----------TWFHKLVTRCYCPTADVAKRAMKA----------GLQASQIKVYGLPVRPSFVKPVRP------------ 336 (536)
Q Consensus 289 ----------~~~~~~~d~vi~~S~~~~~~l~~~----------g~~~~ki~vignpv~~~~~~~~~~------------ 336 (536)
+.....+|.++++|+..++.+... ..+..++.+++|+++.+.+.+..+
T Consensus 195 ~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~ 274 (476)
T cd03791 195 LEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDL 274 (476)
T ss_pred cccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCcccc
Confidence 112457899999999998887531 123578999999999887765422
Q ss_pred ------hHHHHHHcCCC--CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcC--
Q 036427 337 ------KVELRRELGMD--EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLST-- 405 (536)
Q Consensus 337 ------~~~~r~~lgi~--~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~-- 405 (536)
+..++++++++ ++.++++++|+....|++..+++++.+... .++++ ++.|.++ .+.+.+++.
T Consensus 275 ~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~------~~~~l-vi~G~g~~~~~~~~~~~~~ 347 (476)
T cd03791 275 EGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLE------LGGQL-VILGSGDPEYEEALRELAA 347 (476)
T ss_pred ccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHH------cCcEE-EEEecCCHHHHHHHHHHHH
Confidence 23567888884 778889999998878888777777765432 23555 4556654 333333322
Q ss_pred CCCCCEEE-ecChh-hHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC------Ccee
Q 036427 406 DWKIPVQV-KGFVS-KMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN------GCGK 473 (536)
Q Consensus 406 ~~~~~V~~-~G~v~-~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~------g~g~ 473 (536)
....++.+ .++.+ .+..+|+.||++++|| + |.+.+|||+||+|+|+++.++..+. +.+. +.|+
T Consensus 348 ~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~-----v~~~~~~~~~~~G~ 422 (476)
T cd03791 348 RYPGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADT-----VIDYNEDTGEGTGF 422 (476)
T ss_pred hCCCcEEEEEeCCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccce-----EeCCcCCCCCCCeE
Confidence 12457765 45553 5578999999999998 3 7999999999999999997765552 3332 2677
Q ss_pred ecC--CHHHHHHHHHHHhC--CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 474 FSK--SPKEIANMVSQWFG--PKIDELKAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 474 ~~~--d~~~La~~I~~ll~--~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
+++ |+++++++|.++++ .+++.+.+|++++.+ ..++|+++++++.++++
T Consensus 423 ~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 423 VFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLELYR 475 (476)
T ss_pred EeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHh
Confidence 774 89999999998774 167788888887765 46999999999998875
No 67
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.88 E-value=6.3e-20 Score=192.37 Aligned_cols=261 Identities=18% Similarity=0.159 Sum_probs=186.8
Q ss_pred HHHHHHHHhh--CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc--------------------------
Q 036427 236 REVAKGLMKY--QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH-------------------------- 287 (536)
Q Consensus 236 ~~l~~~l~~~--kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~-------------------------- 287 (536)
.+-.++++++ +||+|++.+.+. |+.+++..| +|++.+.+...+.+
T Consensus 81 ~~~~~~~~~~~~~p~~v~~~Gg~v---~~~aA~~~~----~p~~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~p~e~ 153 (396)
T TIGR03492 81 LGQWRALRKWAKKGDLIVAVGDIV---PLLFAWLSG----KPYAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPWER 153 (396)
T ss_pred HHHHHHHHHHhhcCCEEEEECcHH---HHHHHHHcC----CCceEEEeeccceeecCCCCCccchhhhccCCCccCHHHH
Confidence 4555678888 999999999886 677777776 78876333222122
Q ss_pred cccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHH
Q 036427 288 PTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEA 367 (536)
Q Consensus 288 ~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~ 367 (536)
.++..+.++.+++..+...+.+.++|+ ++.++|||+.+...... +. +++++.+++++++|+.+.+....
T Consensus 154 n~l~~~~a~~v~~~~~~t~~~l~~~g~---k~~~vGnPv~d~l~~~~--~~------~l~~~~~~lllLpGSR~ae~~~~ 222 (396)
T TIGR03492 154 WLMRSRRCLAVFVRDRLTARDLRRQGV---RASYLGNPMMDGLEPPE--RK------PLLTGRFRIALLPGSRPPEAYRN 222 (396)
T ss_pred HHhhchhhCEEeCCCHHHHHHHHHCCC---eEEEeCcCHHhcCcccc--cc------ccCCCCCEEEEECCCCHHHHHcc
Confidence 344568999999999999999988876 59999999988765321 11 56667788999999886543322
Q ss_pred --HHHHHHHHhhhcccCCCCcEEEEEe-cCCH--HHHHHHHcCCCC--------------CCEEEecChhhHHHHHhhcC
Q 036427 368 --TARALGNALYDENLGEPIGQVLVIC-GRNK--KLANKLLSTDWK--------------IPVQVKGFVSKMEEAMGACD 428 (536)
Q Consensus 368 --~l~al~~~l~~~~~~~~~~~~lvi~-G~~~--~l~~~l~~~~~~--------------~~V~~~G~v~~l~~ll~~aD 428 (536)
.+...++.+. .. +++.+++.+ |... .+.+.+++.++. .++.+..+.+++.++|+.||
T Consensus 223 lp~~l~al~~L~---~~-~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~AD 298 (396)
T TIGR03492 223 LKLLLRALEALP---DS-QPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWAD 298 (396)
T ss_pred HHHHHHHHHHHh---hC-CCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCC
Confidence 2222223332 12 567777776 5442 344444443332 23677778889999999999
Q ss_pred eEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhC----Cceeec-C-CHHHHHHHHHHHhCCCHHHHHHHHHH
Q 036427 429 CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN----GCGKFS-K-SPKEIANMVSQWFGPKIDELKAMSQN 502 (536)
Q Consensus 429 v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~----g~g~~~-~-d~~~La~~I~~ll~~d~~~~~~m~~~ 502 (536)
++|+.||..| .|++++|+|+|+++..+. +. |+..+.+. |....+ + +++.+++.+..+++ |++.+++|.+.
T Consensus 299 lvI~rSGt~T-~E~a~lg~P~Ilip~~~~-q~-na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~-d~~~~~~~~~~ 374 (396)
T TIGR03492 299 LGIAMAGTAT-EQAVGLGKPVIQLPGKGP-QF-TYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLA-DPELLERCRRN 374 (396)
T ss_pred EEEECcCHHH-HHHHHhCCCEEEEeCCCC-HH-HHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHc-CHHHHHHHHHH
Confidence 9999999776 999999999999997544 44 67666653 444444 3 78999999999999 99999999854
Q ss_pred H-HHhcCCchHHHHHHHHHHH
Q 036427 503 A-LKLARPDAVFRIVQDLHEL 522 (536)
Q Consensus 503 a-~~~a~~~~~~~i~~~i~~l 522 (536)
+ .++...++.+++++.+.++
T Consensus 375 ~~~~lg~~~a~~~ia~~i~~~ 395 (396)
T TIGR03492 375 GQERMGPPGASARIAESILKQ 395 (396)
T ss_pred HHHhcCCCCHHHHHHHHHHHh
Confidence 4 4566778999999988764
No 68
>PLN00142 sucrose synthase
Probab=99.88 E-value=2.8e-20 Score=205.24 Aligned_cols=276 Identities=16% Similarity=0.133 Sum_probs=185.8
Q ss_pred HHHHHHHHH-Hhh--CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC---------------c-c-------
Q 036427 234 IAREVAKGL-MKY--QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST---------------C-H------- 287 (536)
Q Consensus 234 ~~~~l~~~l-~~~--kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~---------------~-~------- 287 (536)
+...+.+.+ ++. +||+||++......+...++++.| +|++.+.|.+.. . +
T Consensus 393 f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~lg----VP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~a 468 (815)
T PLN00142 393 FAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKLG----VTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTA 468 (815)
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHhC----CCEEEEcccchhhhccccCCcccccchhhhhhhchHH
Confidence 344444444 333 599999996544444555566666 999877663321 0 0
Q ss_pred cccccccCCEEEEcCHHHHHH-------HHH-------------hCCC--CCCEEEeCCCCCCCCCCCCCch-H------
Q 036427 288 PTWFHKLVTRCYCPTADVAKR-------AMK-------------AGLQ--ASQIKVYGLPVRPSFVKPVRPK-V------ 338 (536)
Q Consensus 288 ~~~~~~~~d~vi~~S~~~~~~-------l~~-------------~g~~--~~ki~vignpv~~~~~~~~~~~-~------ 338 (536)
..+....+|.+++.+...... +.. .|++ ..++.++++++|...|.+.... .
T Consensus 469 E~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~ 548 (815)
T PLN00142 469 DLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLH 548 (815)
T ss_pred HHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhc
Confidence 122344677888777665531 111 1332 4588999999998866543211 1
Q ss_pred -----------HHHHHcCC--CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecC-CH--------
Q 036427 339 -----------ELRRELGM--DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGR-NK-------- 396 (536)
Q Consensus 339 -----------~~r~~lgi--~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~-~~-------- 396 (536)
..++.+++ ++++++|+++|+....|++..+++++.+... ..+++++++++|. .+
T Consensus 549 n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~----l~~~~~LVIVGgg~d~~~s~d~ee 624 (815)
T PLN00142 549 PSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKR----LRELVNLVVVGGFIDPSKSKDREE 624 (815)
T ss_pred ccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHH----hCCCcEEEEEECCccccccccHHH
Confidence 12345665 5567789999998888998888888765322 1345676665543 10
Q ss_pred -----HHHHHHHcCCCCCCEEEecCh------hhHHHHHh-hcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCcccc
Q 036427 397 -----KLANKLLSTDWKIPVQVKGFV------SKMEEAMG-ACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEA 460 (536)
Q Consensus 397 -----~l~~~l~~~~~~~~V~~~G~v------~~l~~ll~-~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~ 460 (536)
++.+.++++++..+|.|+|.. +++..+++ .+|++|+|| | |++++|||+||+|||+++.++..+
T Consensus 625 ~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~E- 703 (815)
T PLN00142 625 IAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAE- 703 (815)
T ss_pred HHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHH-
Confidence 123345566788899999864 24555555 479999998 3 899999999999999998654333
Q ss_pred CChhhHhhCC-ceeecC--CHHHHHHHHHHH----hCCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHHh
Q 036427 461 GNVPYVVENG-CGKFSK--SPKEIANMVSQW----FGPKIDELKAMSQNALKLA-RPDAVFRIVQDLHELVR 524 (536)
Q Consensus 461 ~na~~lv~~g-~g~~~~--d~~~La~~I~~l----l~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~l~~ 524 (536)
++.+| .|++++ |+++++++|.++ ++ |++.+++|+++|++.+ +.++|+++++.++++..
T Consensus 704 -----IV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~-Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~~ 769 (815)
T PLN00142 704 -----IIVDGVSGFHIDPYHGDEAANKIADFFEKCKE-DPSYWNKISDAGLQRIYECYTWKIYAERLLTLGG 769 (815)
T ss_pred -----HhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 55555 576765 899999998754 47 9999999999999887 56899999999988764
No 69
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.88 E-value=1.1e-20 Score=203.43 Aligned_cols=255 Identities=18% Similarity=0.220 Sum_probs=189.6
Q ss_pred hCCCEEEEcCcccchHHH-HHHHHcCCCCCceEEEEecCCCCc---------------c-c----------ccccccCCE
Q 036427 245 YQPDIIISVHPLMQHVPL-RILRAKGLLKKIVFTTVITDLSTC---------------H-P----------TWFHKLVTR 297 (536)
Q Consensus 245 ~kPDvVi~~~~~~~~i~~-~~~~~~g~~~~ip~v~~~~d~~~~---------------~-~----------~~~~~~~d~ 297 (536)
.++|+||++.....+++. .+.+..| +|++...|+.... . . +..++.+|.
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~----~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ 247 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRG----TPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADR 247 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhC----CCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 478999998754433332 3334344 8888766653210 0 0 123468999
Q ss_pred EEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhh
Q 036427 298 CYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALY 377 (536)
Q Consensus 298 vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~ 377 (536)
+++.|+..++.+.+.|.+++++.+++|+++.+.+.+.... ....+.++++++|+....|++..+++++.....
T Consensus 248 Ii~~s~~~~~~~~~~g~~~~ki~vIpNgid~~~f~~~~~~-------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~ 320 (475)
T cd03813 248 ITTLYEGNRERQIEDGADPEKIRVIPNGIDPERFAPARRA-------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRK 320 (475)
T ss_pred EEecCHHHHHHHHHcCCCHHHeEEeCCCcCHHHcCCcccc-------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHH
Confidence 9999999999888889988999999999998766543211 123456788888888777888888777765433
Q ss_pred hcccCCCCcEEEEEecCCH-------HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhC
Q 036427 378 DENLGEPIGQVLVICGRNK-------KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRG 446 (536)
Q Consensus 378 ~~~~~~~~~~~lvi~G~~~-------~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~G 446 (536)
..++++++ ++|.++ ++.+.++++++.++|+|+| ..++.++|+.+|++|++| | |++++|||+||
T Consensus 321 ----~~p~~~l~-IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G-~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G 394 (475)
T cd03813 321 ----KIPDAEGW-VIGPTDEDPEYAEECRELVESLGLEDNVKFTG-FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG 394 (475)
T ss_pred ----hCCCeEEE-EECCCCcChHHHHHHHHHHHHhCCCCeEEEcC-CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC
Confidence 24677754 456552 2344556677888999999 678999999999999998 4 89999999999
Q ss_pred CcEEEeccCCccccCChhhHhhC-------CceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC-chHHHHH
Q 036427 447 LPIILNDFIAGQEAGNVPYVVEN-------GCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARP-DAVFRIV 516 (536)
Q Consensus 447 lPVI~~~~~~~~e~~na~~lv~~-------g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~-~~~~~i~ 516 (536)
+|||+++.++..+ +++. .+|.+++ |+++++++|.++++ |++.+++|++++++.+.+ +.+++++
T Consensus 395 ~PVVatd~g~~~e------lv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~-~~~~~~~~~~~a~~~v~~~~s~~~~~ 467 (475)
T cd03813 395 IPVVATDVGSCRE------LIEGADDEALGPAGEVVPPADPEALARAILRLLK-DPELRRAMGEAGRKRVERYYTLERMI 467 (475)
T ss_pred CCEEECCCCChHH------HhcCCcccccCCceEEECCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 9999998654333 4544 2566654 89999999999999 999999999999998766 6889999
Q ss_pred HHHHHHH
Q 036427 517 QDLHELV 523 (536)
Q Consensus 517 ~~i~~l~ 523 (536)
+.+.++.
T Consensus 468 ~~y~~lY 474 (475)
T cd03813 468 DSYRRLY 474 (475)
T ss_pred HHHHHHh
Confidence 9988765
No 70
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.87 E-value=1.5e-20 Score=195.20 Aligned_cols=268 Identities=18% Similarity=0.156 Sum_probs=182.2
Q ss_pred hHHHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCC--------CcccccccccCCEEEEc
Q 036427 231 STFIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLS--------TCHPTWFHKLVTRCYCP 301 (536)
Q Consensus 231 ~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~--------~~~~~~~~~~~d~vi~~ 301 (536)
......++.+.+++.+||+||+++.....++ ..+++..+ +|++.+.+... ...+.++.+.+|.++++
T Consensus 73 ~~~~~~~l~~~l~~~~pDvV~~~g~~~~~~~~~~aa~~~~----iPvv~~~~g~~s~~~~~~~~~~r~~~~~~ad~~~~~ 148 (363)
T cd03786 73 TAGLLIGLEAVLLEEKPDLVLVLGDTNETLAAALAAFKLG----IPVAHVEAGLRSFDRGMPDEENRHAIDKLSDLHFAP 148 (363)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHcC----CCEEEEecccccCCCCCCchHHHHHHHHHhhhccCC
Confidence 3445567888899999999999976543332 33444444 89876654211 11223456788999999
Q ss_pred CHHHHHHHHHhCCCCCCEEEeCCCCCCCCC-CCC-CchHHHHHHcCCCCCCCEEEEecCCCCC----CcHHHHHHHHHHH
Q 036427 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFV-KPV-RPKVELRRELGMDEDLPAVLLMGGGEGM----GPIEATARALGNA 375 (536)
Q Consensus 302 S~~~~~~l~~~g~~~~ki~vignpv~~~~~-~~~-~~~~~~r~~lgi~~~~~~il~~gg~~g~----k~~~~~l~al~~~ 375 (536)
++..++.+.+.|++++++.++|||+.+.+. ... ......++.+++++ .+++++++++... +.+..+++++.+.
T Consensus 149 s~~~~~~l~~~G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~-~~~vlv~~~r~~~~~~~k~~~~l~~al~~l 227 (363)
T cd03786 149 TEEARRNLLQEGEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLP-KKYILVTLHRVENVDDGEQLEEILEALAEL 227 (363)
T ss_pred CHHHHHHHHHcCCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCC-CCEEEEEeCCccccCChHHHHHHHHHHHHH
Confidence 999999999999999999999999744322 111 11122345677754 4556666665442 3444555555432
Q ss_pred hhhcccCCCCcEEEEEecCCH---HHHHHHHcCCC-CCCEEEecCh--hhHHHHHhhcCeEEECCChHHHHHHHHhCCcE
Q 036427 376 LYDENLGEPIGQVLVICGRNK---KLANKLLSTDW-KIPVQVKGFV--SKMEEAMGACDCIITKAGPGTIAEAMIRGLPI 449 (536)
Q Consensus 376 l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~-~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~GlPV 449 (536)
. ..++.+ ++.|.+. ++.+.++++.. .++|++.|.. +++..+|..||++|++|| +.+.|||++|+|+
T Consensus 228 -~-----~~~~~v-i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg-gi~~Ea~~~g~Pv 299 (363)
T cd03786 228 -A-----EEDVPV-VFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDSG-GIQEEASFLGVPV 299 (363)
T ss_pred -H-----hcCCEE-EEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEEcCc-cHHhhhhhcCCCE
Confidence 1 123443 3334332 44555555444 5689998764 689999999999999998 4578999999999
Q ss_pred EEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 036427 450 ILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDL 519 (536)
Q Consensus 450 I~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i 519 (536)
|+++... ...++++.|.+..+. ++++++++|..+++ ++..+..|. ...+...+++++|++.|
T Consensus 300 I~~~~~~-----~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~-~~~~~~~~~--~~~~~~~~a~~~I~~~l 362 (363)
T cd03786 300 LNLRDRT-----ERPETVESGTNVLVGTDPEAILAAIEKLLS-DEFAYSLMS--INPYGDGNASERIVEIL 362 (363)
T ss_pred EeeCCCC-----ccchhhheeeEEecCCCHHHHHHHHHHHhc-CchhhhcCC--CCCCCCCHHHHHHHHHh
Confidence 9987422 233577888887776 79999999999999 888888886 55667778888888765
No 71
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.86 E-value=8.7e-19 Score=187.46 Aligned_cols=263 Identities=14% Similarity=0.045 Sum_probs=181.7
Q ss_pred hHHHHHHHHHHHHhhCCCEEEEcCcccchH---HHHHHHHcCCCCCceEE-EEecCCCCccc----------------cc
Q 036427 231 STFIAREVAKGLMKYQPDIIISVHPLMQHV---PLRILRAKGLLKKIVFT-TVITDLSTCHP----------------TW 290 (536)
Q Consensus 231 ~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i---~~~~~~~~g~~~~ip~v-~~~~d~~~~~~----------------~~ 290 (536)
++.-...+.+.|.+++|||||...|...+. ...++++.+ |++ .+++++..+.. .|
T Consensus 419 SI~p~gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~-----PVVasyHTny~eYl~~y~~g~L~~~llk~l~~~ 493 (794)
T PLN02501 419 SIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-----HVVGVVHTNYLEYIKREKNGALQAFFVKHINNW 493 (794)
T ss_pred cccchHHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHcC-----CeEEEEeCCcHHHHhHhcchhHHHHHHHHHHHH
Confidence 334456788889999999999998875432 234555543 555 67777643111 23
Q ss_pred cccc-CCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHH
Q 036427 291 FHKL-VTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATA 369 (536)
Q Consensus 291 ~~~~-~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l 369 (536)
+.+. +|.++++|..+.+ + +...+. ..++||.+++.+... ...++++++....+.++++|+....|++..++
T Consensus 494 v~r~hcD~VIaPS~atq~-L-----~~~vI~-nVnGVDte~F~P~~r-~~~~r~lgi~~~~kgiLfVGRLa~EKGld~LL 565 (794)
T PLN02501 494 VTRAYCHKVLRLSAATQD-L-----PKSVIC-NVHGVNPKFLKIGEK-VAEERELGQQAFSKGAYFLGKMVWAKGYRELI 565 (794)
T ss_pred HHHhhCCEEEcCCHHHHH-h-----ccccee-ecccccccccCCcch-hHHHHhcCCccccCceEEEEcccccCCHHHHH
Confidence 3322 7999999977663 3 222222 236999998876543 22335677765556678899988889998888
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHH
Q 036427 370 RALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEA 442 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEA 442 (536)
+++..... ..++++ ++++|+|+ ++.+.++++++ +|.|+|+.++..++|+.+|++|+|| | |++++||
T Consensus 566 eAla~L~~----~~pnvr-LvIVGDGP~reeLe~la~eLgL--~V~FLG~~dd~~~lyasaDVFVlPS~sEgFGlVlLEA 638 (794)
T PLN02501 566 DLLAKHKN----ELDGFN-LDVFGNGEDAHEVQRAAKRLDL--NLNFLKGRDHADDSLHGYKVFINPSISDVLCTATAEA 638 (794)
T ss_pred HHHHHHHh----hCCCeE-EEEEcCCccHHHHHHHHHHcCC--EEEecCCCCCHHHHHHhCCEEEECCCcccchHHHHHH
Confidence 88765432 235665 46668886 34444555444 5899999988889999999999998 4 9999999
Q ss_pred HHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 036427 443 MIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHEL 522 (536)
Q Consensus 443 ma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l 522 (536)
||||+|||++++++... +.+.+.+....|+++++++|.+++. ++..+..+.+ ....+|+.+++.+++.
T Consensus 639 MA~GlPVVATd~pG~e~------V~~g~nGll~~D~EafAeAI~~LLs-d~~~rl~~~a-----~~~~SWeAaadrLle~ 706 (794)
T PLN02501 639 LAMGKFVVCADHPSNEF------FRSFPNCLTYKTSEDFVAKVKEALA-NEPQPLTPEQ-----RYNLSWEAATQRFMEY 706 (794)
T ss_pred HHcCCCEEEecCCCCce------EeecCCeEecCCHHHHHHHHHHHHh-CchhhhHHHH-----HhhCCHHHHHHHHHHh
Confidence 99999999999865321 3333444555799999999999999 7765544432 2378899999998876
Q ss_pred Hhh
Q 036427 523 VRQ 525 (536)
Q Consensus 523 ~~~ 525 (536)
-+-
T Consensus 707 ~~~ 709 (794)
T PLN02501 707 SDL 709 (794)
T ss_pred hcc
Confidence 543
No 72
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.85 E-value=4.6e-19 Score=190.75 Aligned_cols=261 Identities=18% Similarity=0.168 Sum_probs=184.9
Q ss_pred HHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CC-CCc----ccc-c---------ccccCCEEE
Q 036427 236 REVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DL-STC----HPT-W---------FHKLVTRCY 299 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~-~~~----~~~-~---------~~~~~d~vi 299 (536)
+.+.+.|...++|++|++.+.....+ +.+..+ +.|.+.+.| +. ... ... | ..+.+|.++
T Consensus 201 ~~f~~~L~~~~~di~i~dr~~~~~~~--~~~~~~---~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI 275 (500)
T TIGR02918 201 AYFLKQLNLTKKDIIILDRSTGIGQA--VLENKG---PAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFI 275 (500)
T ss_pred HHHHHHHhCCCCCEEEEcCCcccchH--HHhcCC---CceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEE
Confidence 34434445668999999987654432 223222 367765544 22 110 001 1 134579999
Q ss_pred EcCHHHHHHHHH----hCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHH
Q 036427 300 CPTADVAKRAMK----AGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNA 375 (536)
Q Consensus 300 ~~S~~~~~~l~~----~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~ 375 (536)
++|+..++.+.+ ++.+..++.++|+++++....+.. ......++++|+....|++..+++++...
T Consensus 276 ~~S~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~~-----------~r~~~~il~vGrl~~~Kg~~~li~A~~~l 344 (500)
T TIGR02918 276 TATDIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQYPEQ-----------ERKPFSIITASRLAKEKHIDWLVKAVVKA 344 (500)
T ss_pred ECCHHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccCccc-----------ccCCeEEEEEeccccccCHHHHHHHHHHH
Confidence 999998887664 234467899999987654433211 12234677888887788888888888765
Q ss_pred hhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCc
Q 036427 376 LYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRGLP 448 (536)
Q Consensus 376 l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlP 448 (536)
.+ ..|++++ +++|.++ .+.+.+++.++.++|.+.|+. ++.++|+.||++|+|| | |++++|||+||+|
T Consensus 345 ~~----~~p~~~l-~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~-~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~P 418 (500)
T TIGR02918 345 KK----SVPELTF-DIYGEGGEKQKLQKIINENQAQDYIHLKGHR-NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLG 418 (500)
T ss_pred Hh----hCCCeEE-EEEECchhHHHHHHHHHHcCCCCeEEEcCCC-CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCC
Confidence 53 2567765 5557765 345556667778899999986 7899999999999998 4 8999999999999
Q ss_pred EEEeccCCccccCChhhHhhCC-ceeecC------C----HHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHH
Q 036427 449 IILNDFIAGQEAGNVPYVVENG-CGKFSK------S----PKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQ 517 (536)
Q Consensus 449 VI~~~~~~~~e~~na~~lv~~g-~g~~~~------d----~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~ 517 (536)
||+++..++. ..++++| .|.+++ | +++|+++|..+++ ++ .+++|+++|++.++.++++++++
T Consensus 419 VI~~dv~~G~-----~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~-~~-~~~~~~~~a~~~a~~fs~~~v~~ 491 (500)
T TIGR02918 419 MIGFDVNYGN-----PTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN-SN-DIDAFHEYSYQIAEGFLTANIIE 491 (500)
T ss_pred EEEecCCCCC-----HHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC-hH-HHHHHHHHHHHHHHhcCHHHHHH
Confidence 9999975322 2255554 566664 1 7889999999996 44 68999999999999999999999
Q ss_pred HHHHHHhh
Q 036427 518 DLHELVRQ 525 (536)
Q Consensus 518 ~i~~l~~~ 525 (536)
.|.+++++
T Consensus 492 ~w~~ll~~ 499 (500)
T TIGR02918 492 KWKKLVRE 499 (500)
T ss_pred HHHHHHhh
Confidence 99998864
No 73
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.83 E-value=1e-18 Score=181.93 Aligned_cols=252 Identities=15% Similarity=0.148 Sum_probs=179.5
Q ss_pred hhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC-CCC--cc----------c--ccccccCCEEEEcCHHHHHH
Q 036427 244 KYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD-LST--CH----------P--TWFHKLVTRCYCPTADVAKR 308 (536)
Q Consensus 244 ~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~--~~----------~--~~~~~~~d~vi~~S~~~~~~ 308 (536)
..++|++|++.+.....++ ..... ..+.+.+.|+ ... .. . ......+|.+++.|+..++.
T Consensus 97 ~~~~diii~~~~~~~~~~~--~~~~~---~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 171 (372)
T cd04949 97 DTKPDVFILDRPTLDGQAL--LNMKK---AAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQD 171 (372)
T ss_pred CCCCCEEEECCccccchhH--HhccC---CceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHH
Confidence 4789999998876543212 22111 2344433332 110 00 0 01235788999999999998
Q ss_pred HHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEE
Q 036427 309 AMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQV 388 (536)
Q Consensus 309 l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~ 388 (536)
+.+..-...++.+++++++.....+... .......++++|+....|++..+++++.+... ..+++++
T Consensus 172 l~~~~~~~~~v~~ip~g~~~~~~~~~~~---------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~----~~~~~~l 238 (372)
T cd04949 172 LQKQFGNYNPIYTIPVGSIDPLKLPAQF---------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVK----QVPDATL 238 (372)
T ss_pred HHHHhCCCCceEEEcccccChhhcccch---------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHH----hCCCcEE
Confidence 8775433445889999998765543210 11344578888888777888888887776543 3577775
Q ss_pred EEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccC
Q 036427 389 LVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAG 461 (536)
Q Consensus 389 lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~ 461 (536)
. ++|.++ .+.+..++.++..+|.+.|+.+++.++|+.||++|.+| | |++++|||++|+|||+++...+..
T Consensus 239 ~-i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~-- 315 (372)
T cd04949 239 D-IYGYGDEEEKLKELIEELGLEDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPS-- 315 (372)
T ss_pred E-EEEeCchHHHHHHHHHHcCCcceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcH--
Confidence 4 456554 34455566677889999999899999999999999998 4 899999999999999998653222
Q ss_pred ChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 036427 462 NVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDL 519 (536)
Q Consensus 462 na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i 519 (536)
..+.+...|.+++ |+++++++|..+++ +++.+++|++++++.+.+++++++++.|
T Consensus 316 --~~v~~~~~G~lv~~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 316 --EIIEDGENGYLVPKGDIEALAEAIIELLN-DPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred --HHcccCCCceEeCCCcHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 2244445677776 89999999999999 9999999999999998889999988754
No 74
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.81 E-value=8.1e-18 Score=177.80 Aligned_cols=210 Identities=18% Similarity=0.200 Sum_probs=157.4
Q ss_pred cccccCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHH
Q 036427 290 WFHKLVTRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEAT 368 (536)
Q Consensus 290 ~~~~~~d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~ 368 (536)
++.+.+|.++++|+..++.+.+ ++...+++.+++++++...+.... ..++.+.++++|+....|++..+
T Consensus 179 ~~~~~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~~gv~~~~~~~~~----------~~~~~~~il~~Grl~~~Kg~~~l 248 (407)
T cd04946 179 YLLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYLGVSDPGIISKP----------SKDDTLRIVSCSYLVPVKRVDLI 248 (407)
T ss_pred HHHhcCCEEEECCHHHHHHHHHHCCCccccEEEEECCcccccccCCC----------CCCCCEEEEEeeccccccCHHHH
Confidence 3457899999999999999876 466678899999999876443221 12345677788888778888888
Q ss_pred HHHHHHHhhhcccCCCCcEE-EEEecCCH---HHHHHHHcCCCCCCEEEecChh--hHHHHHhh--cCeEEECC---C-h
Q 036427 369 ARALGNALYDENLGEPIGQV-LVICGRNK---KLANKLLSTDWKIPVQVKGFVS--KMEEAMGA--CDCIITKA---G-P 436 (536)
Q Consensus 369 l~al~~~l~~~~~~~~~~~~-lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~--~l~~ll~~--aDv~V~~s---G-~ 436 (536)
++++.+... ..++..+ +++.|.++ .+++.+++.....+|+|+|+++ ++.++|+. +|++|.+| | |
T Consensus 249 i~a~~~l~~----~~p~~~l~~~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p 324 (407)
T cd04946 249 IKALAALAK----ARPSIKIKWTHIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLP 324 (407)
T ss_pred HHHHHHHHH----hCCCceEEEEEEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCcccccc
Confidence 887766543 2343333 34556665 3444454555677899999995 78899975 67899888 5 8
Q ss_pred HHHHHHHHhCCcEEEeccCCccccCChhhHhhCC-ceeecC---CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC-Cch
Q 036427 437 GTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENG-CGKFSK---SPKEIANMVSQWFGPKIDELKAMSQNALKLAR-PDA 511 (536)
Q Consensus 437 ~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g-~g~~~~---d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~-~~~ 511 (536)
++++|||++|+|||+++.++..| +++++ .|.++. |+++++++|.++++ |++.+++|+++|++... .+.
T Consensus 325 ~~llEAma~G~PVIas~vgg~~e------~i~~~~~G~l~~~~~~~~~la~~I~~ll~-~~~~~~~m~~~ar~~~~~~f~ 397 (407)
T cd04946 325 VSIMEAMSFGIPVIATNVGGTPE------IVDNGGNGLLLSKDPTPNELVSSLSKFID-NEEEYQTMREKAREKWEENFN 397 (407)
T ss_pred HHHHHHHHcCCCEEeCCCCCcHH------HhcCCCcEEEeCCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999655443 55565 677664 68999999999999 99999999999999874 577
Q ss_pred HHHHHHHHH
Q 036427 512 VFRIVQDLH 520 (536)
Q Consensus 512 ~~~i~~~i~ 520 (536)
++.+.+.+.
T Consensus 398 ~~~~~~~~~ 406 (407)
T cd04946 398 ASKNYREFA 406 (407)
T ss_pred HHHhHHHhc
Confidence 777776653
No 75
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.81 E-value=5.5e-18 Score=175.15 Aligned_cols=184 Identities=20% Similarity=0.175 Sum_probs=135.7
Q ss_pred cccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHH
Q 036427 292 HKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARA 371 (536)
Q Consensus 292 ~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~a 371 (536)
.+.+|.+++.|+.+++.+.+..- .+..+++||++.+.+.+.. ...+.++++|+....|+...++++
T Consensus 151 ~~~~d~ii~~S~~~~~~~~~~~~--~~~~vi~~~~d~~~~~~~~------------~~~~~il~~G~~~~~K~~~~li~a 216 (351)
T cd03804 151 AARVDYFIANSRFVARRIKKYYG--RDATVIYPPVDTDRFTPAE------------EKEDYYLSVGRLVPYKRIDLAIEA 216 (351)
T ss_pred hcCCCEEEECCHHHHHHHHHHhC--CCcEEECCCCCHhhcCcCC------------CCCCEEEEEEcCccccChHHHHHH
Confidence 37899999999999999876532 3467899998876654321 124567888887777887777776
Q ss_pred HHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChh--hHHHHHhhcCeEEECC--C-hHHHHHHHHhC
Q 036427 372 LGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVS--KMEEAMGACDCIITKA--G-PGTIAEAMIRG 446 (536)
Q Consensus 372 l~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~s--G-~~tllEAma~G 446 (536)
+.+. + .+ ++++|.+++. +.+++ ...++|+|.|+++ ++.++|+.||++++|+ | |.+++|||+||
T Consensus 217 ~~~~--------~-~~-l~ivG~g~~~-~~l~~-~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e~~g~~~~Eama~G 284 (351)
T cd03804 217 FNKL--------G-KR-LVVIGDGPEL-DRLRA-KAGPNVTFLGRVSDEELRDLYARARAFLFPAEEDFGIVPVEAMASG 284 (351)
T ss_pred HHHC--------C-Cc-EEEEECChhH-HHHHh-hcCCCEEEecCCCHHHHHHHHHhCCEEEECCcCCCCchHHHHHHcC
Confidence 6531 2 45 4566777632 33333 4567999999995 5999999999999997 3 88999999999
Q ss_pred CcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCH-HHHHHHHHHHHHhc
Q 036427 447 LPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKI-DELKAMSQNALKLA 507 (536)
Q Consensus 447 lPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~-~~~~~m~~~a~~~a 507 (536)
+|||+++.++..+. +.+...|.+++ |+++++++|..+++ ++ ..+++++++++++.
T Consensus 285 ~Pvi~~~~~~~~e~-----i~~~~~G~~~~~~~~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~ 342 (351)
T cd03804 285 TPVIAYGKGGALET-----VIDGVTGILFEEQTVESLAAAVERFEK-NEDFDPQAIRAHAERFS 342 (351)
T ss_pred CCEEEeCCCCCcce-----eeCCCCEEEeCCCCHHHHHHHHHHHHh-CcccCHHHHHHHHHhcC
Confidence 99999987654442 44556777774 89999999999999 77 55666666665543
No 76
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.81 E-value=1.4e-17 Score=175.64 Aligned_cols=161 Identities=20% Similarity=0.202 Sum_probs=125.7
Q ss_pred CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhh
Q 036427 347 DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGA 426 (536)
Q Consensus 347 ~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~ 426 (536)
++++++|+++.|+.+..........+.+++.. .+.++++.+|...... ....++|.+.+|++ ..++|..
T Consensus 236 ~~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~-----~~~~~i~~~g~~~~~~-----~~~~~~v~~~~~~p-~~~ll~~ 304 (401)
T cd03784 236 AAGRPPVYVGFGSMVVRDPEALARLDVEAVAT-----LGQRAILSLGWGGLGA-----EDLPDNVRVVDFVP-HDWLLPR 304 (401)
T ss_pred hCCCCcEEEeCCCCcccCHHHHHHHHHHHHHH-----cCCeEEEEccCccccc-----cCCCCceEEeCCCC-HHHHhhh
Confidence 34567888888887655555666666666642 3467777777654211 23457899999985 6889999
Q ss_pred cCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHH
Q 036427 427 CDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQN 502 (536)
Q Consensus 427 aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~ 502 (536)
||++|+++|.+|+.||+++|+|+|++|...+|. .|++.+.+.|+|..+. +++++.++++++++ ++ .++++.+.
T Consensus 305 ~d~~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~-~~a~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~-~~-~~~~~~~~ 381 (401)
T cd03784 305 CAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQP-FWAARVAELGAGPALDPRELTAERLAAALRRLLD-PP-SRRRAAAL 381 (401)
T ss_pred hheeeecCCchhHHHHHHcCCCEEeeCCCCCcH-HHHHHHHHCCCCCCCCcccCCHHHHHHHHHHHhC-HH-HHHHHHHH
Confidence 999999999999999999999999999987754 5999999999998774 68999999999998 54 56667777
Q ss_pred HHHhcCCchHHHHHHHHHH
Q 036427 503 ALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 503 a~~~a~~~~~~~i~~~i~~ 521 (536)
+.++....+.+++++.|++
T Consensus 382 ~~~~~~~~g~~~~~~~ie~ 400 (401)
T cd03784 382 LRRIREEDGVPSAADVIER 400 (401)
T ss_pred HHHHHhccCHHHHHHHHhh
Confidence 7777677888888887764
No 77
>PLN02275 transferase, transferring glycosyl groups
Probab=99.81 E-value=2.1e-17 Score=172.61 Aligned_cols=226 Identities=13% Similarity=0.153 Sum_probs=145.8
Q ss_pred HHhhCCCEEEEcCcccc--hHHH-HHHHHcCCCCCceEEEEecCCCCc------------------ccccccccCCEEEE
Q 036427 242 LMKYQPDIIISVHPLMQ--HVPL-RILRAKGLLKKIVFTTVITDLSTC------------------HPTWFHKLVTRCYC 300 (536)
Q Consensus 242 l~~~kPDvVi~~~~~~~--~i~~-~~~~~~g~~~~ip~v~~~~d~~~~------------------~~~~~~~~~d~vi~ 300 (536)
+++.+||+||++.+... .+.. .+++.. +.|+++..||+... ..+++++.+|.+++
T Consensus 96 ~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~----~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~ 171 (371)
T PLN02275 96 VKIPRPDVFLVQNPPSVPTLAVVKLACWLR----RAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHLC 171 (371)
T ss_pred hhCCCCCEEEEeCCCCcHHHHHHHHHHHHh----CCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHHHHHHhhCCEEEE
Confidence 35689999999764432 1122 223333 37887666664210 11355788999999
Q ss_pred cCHHHHHHHHHh-CCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCC-CEEEEecCCCCCCcHHHHHHHHHHHhhh
Q 036427 301 PTADVAKRAMKA-GLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDL-PAVLLMGGGEGMGPIEATARALGNALYD 378 (536)
Q Consensus 301 ~S~~~~~~l~~~-g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~-~~il~~gg~~g~k~~~~~l~al~~~l~~ 378 (536)
+|+.+.+.+.+. +++ +.+++|+.. +.+.+..... .+..+. .+++++|+....|+...+++++......
T Consensus 172 ~S~~~~~~l~~~~g~~---i~vi~n~~~-~~f~~~~~~~------~~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~ 241 (371)
T PLN02275 172 VTKAMQHELDQNWGIR---ATVLYDQPP-EFFRPASLEI------RLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRR 241 (371)
T ss_pred CCHHHHHHHHHhcCCC---eEEECCCCH-HHcCcCCchh------cccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhh
Confidence 999999998774 664 788999853 3333321111 111223 3445556656667777666665432110
Q ss_pred ---c-c---------cCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEec-Ch--hhHHHHHhhcCeEEEC--C---
Q 036427 379 ---E-N---------LGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKG-FV--SKMEEAMGACDCIITK--A--- 434 (536)
Q Consensus 379 ---~-~---------~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G-~v--~~l~~ll~~aDv~V~~--s--- 434 (536)
+ . ...+++++ +++|+|+ ++++.+++.++.+ +.+.+ ++ +++.++|+.||++|++ +
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~i~l-~ivG~G~~~~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~ 319 (371)
T PLN02275 242 VAARLNESDSASGKQSLYPRLLF-IITGKGPQKAMYEEKISRLNLRH-VAFRTMWLEAEDYPLLLGSADLGVSLHTSSSG 319 (371)
T ss_pred hhhccccccccccccccCCCeEE-EEEeCCCCHHHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHHHhCCEEEEecccccc
Confidence 0 0 12356665 5567775 4566677777764 88765 55 6999999999999864 2
Q ss_pred -C-hHHHHHHHHhCCcEEEeccCCccccCChhhHh-hCCceeecCCHHHHHHHHHHHh
Q 036427 435 -G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVV-ENGCGKFSKSPKEIANMVSQWF 489 (536)
Q Consensus 435 -G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv-~~g~g~~~~d~~~La~~I~~ll 489 (536)
| |++++||||||+|||+++.++.. +++ +.++|.+++++++|+++|.+++
T Consensus 320 e~~p~~llEAmA~G~PVVa~~~gg~~------eiv~~g~~G~lv~~~~~la~~i~~l~ 371 (371)
T PLN02275 320 LDLPMKVVDMFGCGLPVCAVSYSCIG------ELVKDGKNGLLFSSSSELADQLLELL 371 (371)
T ss_pred ccccHHHHHHHHCCCCEEEecCCChH------HHccCCCCeEEECCHHHHHHHHHHhC
Confidence 3 88999999999999999854433 355 4557888889999999998875
No 78
>PHA01633 putative glycosyl transferase group 1
Probab=99.79 E-value=1e-16 Score=162.81 Aligned_cols=233 Identities=15% Similarity=0.106 Sum_probs=163.6
Q ss_pred ceEEEEecCCC--CcccccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCC-chHHHHHHcCCC-CC
Q 036427 274 IVFTTVITDLS--TCHPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVR-PKVELRRELGMD-ED 349 (536)
Q Consensus 274 ip~v~~~~d~~--~~~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~-~~~~~r~~lgi~-~~ 349 (536)
.|+++..+... ..+.+|+.+ -+.++++|+.+++.+++.|++.. + ++++++|.+.+.+.. ...+++++++.. ++
T Consensus 71 ~~~~tt~~g~~~~~~y~~~m~~-~~~vIavS~~t~~~L~~~G~~~~-i-~I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~ 147 (335)
T PHA01633 71 KYFYTTCDGIPNIEIVNKYLLQ-DVKFIPNSKFSAENLQEVGLQVD-L-PVFHGINFKIVENAEKLVPQLKQKLDKDFPD 147 (335)
T ss_pred CceEEeeCCcCchHHHHHHHhc-CCEEEeCCHHHHHHHHHhCCCCc-e-eeeCCCChhhcCccchhhHHHHHHhCcCCCC
Confidence 56665555433 233455555 45889999999999999888754 4 466899987766543 234667777653 45
Q ss_pred CCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCC----cEEEEEecCCHHHHHHHHcCCCCCCEEEec---Ch--hhH
Q 036427 350 LPAVLLMGGGEGMGPIEATARALGNALYDENLGEPI----GQVLVICGRNKKLANKLLSTDWKIPVQVKG---FV--SKM 420 (536)
Q Consensus 350 ~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~----~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G---~v--~~l 420 (536)
.++++++|+....|+...+++++..... ..++ +++ ++.|.. .+++++...+|+|+| ++ +++
T Consensus 148 ~~~i~~vGRl~~~KG~~~LI~A~~~L~~----~~p~~~~~i~l-~ivG~~-----~~~~l~l~~~V~f~g~~G~~~~~dl 217 (335)
T PHA01633 148 TIKFGIVSGLTKRKNMDLMLQVFNELNT----KYPDIAKKIHF-FVISHK-----QFTQLEVPANVHFVAEFGHNSREYI 217 (335)
T ss_pred CeEEEEEeCCccccCHHHHHHHHHHHHH----hCCCccccEEE-EEEcHH-----HHHHcCCCCcEEEEecCCCCCHHHH
Confidence 5678888888888888888887765433 1233 344 444532 234456677899985 33 589
Q ss_pred HHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCcccc-C----------ChhhHh--hCCceeecC--CHHHH
Q 036427 421 EEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEA-G----------NVPYVV--ENGCGKFSK--SPKEI 481 (536)
Q Consensus 421 ~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~-~----------na~~lv--~~g~g~~~~--d~~~L 481 (536)
.++|+.||++|+|| | |++++|||+||+|||+++.++..|. + ++.... +.|.|+.+. |++++
T Consensus 218 ~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~l 297 (335)
T PHA01633 218 FAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDM 297 (335)
T ss_pred HHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHH
Confidence 99999999999998 4 8999999999999999998766552 1 122222 245666664 99999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 482 ANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 482 a~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
+++|..++. .. .++.+++++++.++.+.++++++.+++
T Consensus 298 a~ai~~~~~-~~-~~~~~~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 298 ANAIILAFE-LQ-DREERSMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred HHHHHHHHh-cc-ChhhhhHHHHHHHHhcCHHHHHHHhhC
Confidence 999999966 22 233447788889999999999988763
No 79
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.78 E-value=3.2e-18 Score=174.64 Aligned_cols=300 Identities=21% Similarity=0.210 Sum_probs=162.5
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||+|.+.+.|.||..++++|+++| + |++|.+....... .+....+. + ... +-+.......... ...
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--r---g~~v~~~~~~~~~-~~~~~~~~--~---~~~-~~~~~~~~~~~~~-~~~ 67 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--R---GHEVTFITSGPAP-EFLKPRFP--V---REI-PGLGPIQENGRLD-RWK 67 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--c---cCceEEEEcCCcH-HHhccccC--E---EEc-cCceEeccCCccc-hHH
Confidence 8999999999999999999999999 4 4666555332210 00000000 0 000 0011111000000 000
Q ss_pred hhhh-----hhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc-cccccccCCEE
Q 036427 225 SNFA-----ATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH-PTWFHKLVTRC 298 (536)
Q Consensus 225 ~~~~-----~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~-~~~~~~~~d~v 298 (536)
.... .......+++.+++++++||+||++.... ...+++..| +|++.+.+.....+ ..++... .
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDlVIsD~~~~---~~~aa~~~g----iP~i~i~~~~~~~~~~~~~~~~-~-- 137 (318)
T PF13528_consen 68 TVRNNIRWLARLARRIRREIRWLREFRPDLVISDFYPL---AALAARRAG----IPVIVISNQYWFLHPNFWLPWD-Q-- 137 (318)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEcChHH---HHHHHHhcC----CCEEEEEehHHcccccCCcchh-h--
Confidence 0010 11233445677889999999999997654 234556665 89887766543221 1111100 0
Q ss_pred EEcCHHHHHHHHHhCCCCCCEEEeCCC---CCCCCCCCCCchHHHHH-HcCC-CCCCCEEEEecCCCCCCcHHHHHHHHH
Q 036427 299 YCPTADVAKRAMKAGLQASQIKVYGLP---VRPSFVKPVRPKVELRR-ELGM-DEDLPAVLLMGGGEGMGPIEATARALG 373 (536)
Q Consensus 299 i~~S~~~~~~l~~~g~~~~ki~vignp---v~~~~~~~~~~~~~~r~-~lgi-~~~~~~il~~gg~~g~k~~~~~l~al~ 373 (536)
.......+...+.-.++....+.... ......... ...-+++ .+.. +.+.+.|+++.|+.+.. +++..+.
T Consensus 138 -~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~iLv~~gg~~~~---~~~~~l~ 212 (318)
T PF13528_consen 138 -DFGRLIERYIDRYHFPPADRRLALSFYPPLPPFFRVPF-VGPIIRPEIRELPPEDEPKILVYFGGGGPG---DLIEALK 212 (318)
T ss_pred -hHHHHHHHhhhhccCCcccceecCCccccccccccccc-cCchhcccccccCCCCCCEEEEEeCCCcHH---HHHHHHH
Confidence 00000111111111122222211111 111000000 0000110 1111 12345566555544433 3333332
Q ss_pred HHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh-hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEe
Q 036427 374 NALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV-SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILN 452 (536)
Q Consensus 374 ~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v-~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~ 452 (536)
+ .++..++++ |..... ....+|++.++. +++.++|..||++|+.+|.+|+.|++++|+|+|++
T Consensus 213 ~--------~~~~~~~v~-g~~~~~-------~~~~ni~~~~~~~~~~~~~m~~ad~vIs~~G~~t~~Ea~~~g~P~l~i 276 (318)
T PF13528_consen 213 A--------LPDYQFIVF-GPNAAD-------PRPGNIHVRPFSTPDFAELMAAADLVISKGGYTTISEALALGKPALVI 276 (318)
T ss_pred h--------CCCCeEEEE-cCCccc-------ccCCCEEEeecChHHHHHHHHhCCEEEECCCHHHHHHHHHcCCCEEEE
Confidence 2 245566555 766310 115689999988 89999999999999999999999999999999999
Q ss_pred ccCC-ccccCChhhHhhCCceeecC----CHHHHHHHHHHH
Q 036427 453 DFIA-GQEAGNVPYVVENGCGKFSK----SPKEIANMVSQW 488 (536)
Q Consensus 453 ~~~~-~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~l 488 (536)
|..+ ..|..|+..+.+.|.|..++ +++.|.++|+++
T Consensus 277 p~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 277 PRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred eCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence 9864 45566999999999999875 688888887654
No 80
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.78 E-value=4.7e-17 Score=162.92 Aligned_cols=263 Identities=21% Similarity=0.172 Sum_probs=157.5
Q ss_pred eEEEEeC---CCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhc-cccceeecCCCccc
Q 036427 146 KVLILMS---DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHG-PLWKMTYYGTAPRV 221 (536)
Q Consensus 146 KIL~~~~---~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~-~l~~~~~~~~~~~~ 221 (536)
||+|.+. .+|.||.+||++||++|++. |++|..+...... .+ ...+.+.+ +... .... .
T Consensus 1 ~i~ir~Da~~~iG~GHv~Rcl~LA~~l~~~---g~~v~f~~~~~~~------~~---~~~i~~~g~~v~~--~~~~--~- 63 (279)
T TIGR03590 1 KILFRADASSEIGLGHVMRCLTLARALHAQ---GAEVAFACKPLPG------DL---IDLLLSAGFPVYE--LPDE--S- 63 (279)
T ss_pred CEEEEecCCccccccHHHHHHHHHHHHHHC---CCEEEEEeCCCCH------HH---HHHHHHcCCeEEE--ecCC--C-
Confidence 6888873 48899999999999999888 7787554321110 00 01111111 1111 0000 0
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEc
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCP 301 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~ 301 (536)
....-..++.+++++.+||+||++++.....-....+.. .+.+.++.|+.. ++ ..+|.++..
T Consensus 64 --------~~~~d~~~~~~~l~~~~~d~vV~D~y~~~~~~~~~~k~~-----~~~l~~iDD~~~-~~----~~~D~vin~ 125 (279)
T TIGR03590 64 --------SRYDDALELINLLEEEKFDILIVDHYGLDADWEKLIKEF-----GRKILVIDDLAD-RP----HDCDLLLDQ 125 (279)
T ss_pred --------chhhhHHHHHHHHHhcCCCEEEEcCCCCCHHHHHHHHHh-----CCeEEEEecCCC-CC----cCCCEEEeC
Confidence 001123467888999999999999975443212223322 345567777642 22 268999887
Q ss_pred CHHHHHHHHHhC-CCCCCEEEeCC---CCCCCCCCCCCchHHHHHHcCCCCCCCEEEE-ecCCCCCCcHHHHHHHHHHHh
Q 036427 302 TADVAKRAMKAG-LQASQIKVYGL---PVRPSFVKPVRPKVELRRELGMDEDLPAVLL-MGGGEGMGPIEATARALGNAL 376 (536)
Q Consensus 302 S~~~~~~l~~~g-~~~~ki~vign---pv~~~~~~~~~~~~~~r~~lgi~~~~~~il~-~gg~~g~k~~~~~l~al~~~l 376 (536)
+.. .+...-.+ +++....+.|. +++++|..... +. ..+ ++.+.|++ +||+.+..-..++++++.+.
T Consensus 126 ~~~-~~~~~y~~~~~~~~~~l~G~~Y~~lr~eF~~~~~-~~-~~~-----~~~~~iLi~~GG~d~~~~~~~~l~~l~~~- 196 (279)
T TIGR03590 126 NLG-ADASDYQGLVPANCRLLLGPSYALLREEFYQLAT-AN-KRR-----KPLRRVLVSFGGADPDNLTLKLLSALAES- 196 (279)
T ss_pred CCC-cCHhHhcccCcCCCeEEecchHHhhhHHHHHhhH-hh-hcc-----cccCeEEEEeCCcCCcCHHHHHHHHHhcc-
Confidence 765 33322223 55566778887 78777654321 11 110 12244444 55544433234455555432
Q ss_pred hhcccCCCCcEEEEEecCCHHHHHHHHcC-CCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccC
Q 036427 377 YDENLGEPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 377 ~~~~~~~~~~~~lvi~G~~~~l~~~l~~~-~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~ 455 (536)
..+.++.+++|.+....+.+++. ....++++.+++++|.++|+.||++|+++| .|+.|++++|+|+|+++..
T Consensus 197 ------~~~~~i~vv~G~~~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl~Is~~G-~T~~E~~a~g~P~i~i~~~ 269 (279)
T TIGR03590 197 ------QINISITLVTGSSNPNLDELKKFAKEYPNIILFIDVENMAELMNEADLAIGAAG-STSWERCCLGLPSLAICLA 269 (279)
T ss_pred ------ccCceEEEEECCCCcCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCEEEECCc-hHHHHHHHcCCCEEEEEec
Confidence 24566777888764222222221 123489999999999999999999999777 8999999999999999987
Q ss_pred Cccc
Q 036427 456 AGQE 459 (536)
Q Consensus 456 ~~~e 459 (536)
.+|+
T Consensus 270 ~nQ~ 273 (279)
T TIGR03590 270 ENQQ 273 (279)
T ss_pred ccHH
Confidence 6655
No 81
>PHA01630 putative group 1 glycosyl transferase
Probab=99.76 E-value=8.9e-17 Score=164.62 Aligned_cols=214 Identities=14% Similarity=0.123 Sum_probs=147.1
Q ss_pred cc-cccCCEEEEcCHHHHHHHHHhCCC-CCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCC-CCCcHH
Q 036427 290 WF-HKLVTRCYCPTADVAKRAMKAGLQ-ASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGE-GMGPIE 366 (536)
Q Consensus 290 ~~-~~~~d~vi~~S~~~~~~l~~~g~~-~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~-g~k~~~ 366 (536)
++ .+.+|.++++|+.+++.+.+.+++ ++++.+++|++|.+.+.+.... .+.+.+++++|.. ..|+..
T Consensus 89 ~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f~~~~~~----------~~~~~vl~~~g~~~~~Kg~d 158 (331)
T PHA01630 89 FFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMFEYKPKE----------KPHPCVLAILPHSWDRKGGD 158 (331)
T ss_pred HHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHcCCCccc----------cCCCEEEEEeccccccCCHH
Confidence 44 577999999999999999888775 5789999999998766543211 1234555566554 567777
Q ss_pred HHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHHH
Q 036427 367 ATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTIA 440 (536)
Q Consensus 367 ~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tll 440 (536)
.+++++..... ..+++.++ +.|.+... ..+. ++. . +.+.+ +++.++|+.||++|+|| | |++++
T Consensus 159 ~Li~A~~~l~~----~~~~~~ll-ivG~~~~~-~~l~--~~~-~--~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~l 227 (331)
T PHA01630 159 IVVKIFHELQN----EGYDFYFL-IKSSNMLD-PRLF--GLN-G--VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVI 227 (331)
T ss_pred HHHHHHHHHHh----hCCCEEEE-EEeCcccc-hhhc--ccc-c--eeccCCHHHHHHHHHhCCEEEECCccccCChHHH
Confidence 77777755432 23566654 45654311 1111 111 1 22223 69999999999999998 3 89999
Q ss_pred HHHHhCCcEEEeccCCcccc---CChhhHhh------------CCceeecC-CHHHHHHHHHHHhCCC---HHHHHHHHH
Q 036427 441 EAMIRGLPIILNDFIAGQEA---GNVPYVVE------------NGCGKFSK-SPKEIANMVSQWFGPK---IDELKAMSQ 501 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e~---~na~~lv~------------~g~g~~~~-d~~~La~~I~~ll~~d---~~~~~~m~~ 501 (536)
||||||+|||+++.++..|. +....+++ .++|.+++ |.+++++++.+++. + ++.++.++.
T Consensus 228 EAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~-~~~~~~~~~~~~~ 306 (331)
T PHA01630 228 EALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDAYQKLLEALA-NWTPEKKKENLEG 306 (331)
T ss_pred HHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCCCHHHHHHHHHHHHh-CCCHHHHHHHHHH
Confidence 99999999999997654442 00111111 12355554 78888888888888 6 456667777
Q ss_pred HHHHhcCCchHHHHHHHHHHHHhh
Q 036427 502 NALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 502 ~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
+++..++.++++++++++++++++
T Consensus 307 ~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 307 RAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhc
Confidence 777788899999999999998864
No 82
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=99.72 E-value=1.3e-14 Score=147.26 Aligned_cols=329 Identities=19% Similarity=0.198 Sum_probs=212.6
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
.=|+|.+.+. |....+.+|.++|++++| +..+++++.... +.....+.-+-.....|.+
T Consensus 50 p~vWiHaaSV--GEv~a~~pLv~~l~~~~P-~~~ilvTt~T~T-----------g~e~a~~~~~~~v~h~YlP------- 108 (419)
T COG1519 50 PLVWIHAASV--GEVLAALPLVRALRERFP-DLRILVTTMTPT-----------GAERAAALFGDSVIHQYLP------- 108 (419)
T ss_pred CeEEEEecch--hHHHHHHHHHHHHHHhCC-CCCEEEEecCcc-----------HHHHHHHHcCCCeEEEecC-------
Confidence 4599999998 999999999999999988 567777654321 1110111111001111111
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcC-cccchHHHHHHHHcCCCCCceEEEEecCCCC-ccc---------ccccc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVH-PLMQHVPLRILRAKGLLKKIVFTTVITDLST-CHP---------TWFHK 293 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~-~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-~~~---------~~~~~ 293 (536)
.. ....+.++++..+||++|... ..+... +..++++| +|.+.+-.-++. .+. +.+.+
T Consensus 109 -----~D--~~~~v~rFl~~~~P~l~Ii~EtElWPnl-i~e~~~~~----~p~~LvNaRLS~rS~~~y~k~~~~~~~~~~ 176 (419)
T COG1519 109 -----LD--LPIAVRRFLRKWRPKLLIIMETELWPNL-INELKRRG----IPLVLVNARLSDRSFARYAKLKFLARLLFK 176 (419)
T ss_pred -----cC--chHHHHHHHHhcCCCEEEEEeccccHHH-HHHHHHcC----CCEEEEeeeechhhhHHHHHHHHHHHHHHH
Confidence 01 112566789999999888754 333221 23344555 888765443322 111 22356
Q ss_pred cCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCC--CchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHH
Q 036427 294 LVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPV--RPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARA 371 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~--~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~a 371 (536)
..|.+++.|+..++++...|.++ +.++||--.+..-.+. ...+.+|..++.+ ++++++.+. ..+-++++..
T Consensus 177 ~i~li~aQse~D~~Rf~~LGa~~--v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~--r~v~iaaST---H~GEeei~l~ 249 (419)
T COG1519 177 NIDLILAQSEEDAQRFRSLGAKP--VVVTGNLKFDIEPPPQLAAELAALRRQLGGH--RPVWVAAST---HEGEEEIILD 249 (419)
T ss_pred hcceeeecCHHHHHHHHhcCCcc--eEEecceeecCCCChhhHHHHHHHHHhcCCC--CceEEEecC---CCchHHHHHH
Confidence 78899999999999999999876 8899985322211111 1123456666543 555544433 2233444444
Q ss_pred HHHHhhhcccCCCCcEEEEEecCCH----HHHHHHHcCC-------------CCCCEEEecChhhHHHHHhhcCeEEECC
Q 036427 372 LGNALYDENLGEPIGQVLVICGRNK----KLANKLLSTD-------------WKIPVQVKGFVSKMEEAMGACDCIITKA 434 (536)
Q Consensus 372 l~~~l~~~~~~~~~~~~lvi~G~~~----~l~~~l~~~~-------------~~~~V~~~G~v~~l~~ll~~aDv~V~~s 434 (536)
+.+.+++ ..++.. ++++-.++ ...+.+++.+ ...+|.+.+...+|..+|..+|+.++.+
T Consensus 250 ~~~~l~~---~~~~~l-lIlVPRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGG 325 (419)
T COG1519 250 AHQALKK---QFPNLL-LILVPRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGG 325 (419)
T ss_pred HHHHHHh---hCCCce-EEEecCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECC
Confidence 4444442 345654 45556655 2334444432 2347888888899999999999977754
Q ss_pred -----ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC
Q 036427 435 -----GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARP 509 (536)
Q Consensus 435 -----G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~ 509 (536)
||..++|++++|+|||.-++..+..+ .++.+.+.|.+..++|.+.+++++..++. |++.+++|++++..+..+
T Consensus 326 Slv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~e-i~~~l~~~ga~~~v~~~~~l~~~v~~l~~-~~~~r~~~~~~~~~~v~~ 403 (419)
T COG1519 326 SLVPIGGHNPLEPAAFGTPVIFGPYTFNFSD-IAERLLQAGAGLQVEDADLLAKAVELLLA-DEDKREAYGRAGLEFLAQ 403 (419)
T ss_pred cccCCCCCChhhHHHcCCCEEeCCccccHHH-HHHHHHhcCCeEEECCHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHH
Confidence 78999999999999999998765443 56778889999999999999999999999 899999999999987654
Q ss_pred c--hHHHHHHHH
Q 036427 510 D--AVFRIVQDL 519 (536)
Q Consensus 510 ~--~~~~i~~~i 519 (536)
+ +.++..+.|
T Consensus 404 ~~gal~r~l~~l 415 (419)
T COG1519 404 NRGALARTLEAL 415 (419)
T ss_pred hhHHHHHHHHHh
Confidence 3 444444444
No 83
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=99.72 E-value=4.5e-17 Score=150.87 Aligned_cols=169 Identities=34% Similarity=0.616 Sum_probs=139.7
Q ss_pred HHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccchhhhhhhHHHHHH
Q 036427 158 HRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIARE 237 (536)
Q Consensus 158 h~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (536)
|...|.+|+++|++++|++++|.++|......++........|....+..++|...|+.+..................++
T Consensus 1 H~~aA~Al~eal~~~~~~~~~v~v~D~~~~~~p~~~~~~~~~Y~~~~~~~~ly~~~y~~~~~~~~~~~~~~~~~~~~~~~ 80 (169)
T PF06925_consen 1 HNSAARALAEALERRRGPDAEVEVVDFLEEASPWLRRLIRKAYLFMVRHAPLYGWLYRWTDKRRPRSKFLSALSRLFARR 80 (169)
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEEehHHhhChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHH
Confidence 67889999999999767789999999887766665666778898888877888888887654333333334456667789
Q ss_pred HHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEcCHHHHHHHHHhCCCCC
Q 036427 238 VAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGLQAS 317 (536)
Q Consensus 238 l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ 317 (536)
+.++|++++||+|+|++|+...+++..++..+..+++|++++++|+...|+.|+.+.+|.++++++++++.+.+.|++++
T Consensus 81 l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H~~W~~~~~D~y~Vase~~~~~l~~~Gi~~~ 160 (169)
T PF06925_consen 81 LIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVHPFWIHPGVDRYFVASEEVKEELIERGIPPE 160 (169)
T ss_pred HHHHHhhcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCCcCeecCCCCEEEECCHHHHHHHHHcCCChh
Confidence 99999999999999999998776566566666554599999999997579999999999999999999999999999999
Q ss_pred CEEEeCCCC
Q 036427 318 QIKVYGLPV 326 (536)
Q Consensus 318 ki~vignpv 326 (536)
+|+++|.|+
T Consensus 161 ~I~vtGiPV 169 (169)
T PF06925_consen 161 RIHVTGIPV 169 (169)
T ss_pred HEEEeCccC
Confidence 999999885
No 84
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.71 E-value=1.1e-14 Score=153.08 Aligned_cols=165 Identities=18% Similarity=0.211 Sum_probs=128.5
Q ss_pred CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhc
Q 036427 348 EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGAC 427 (536)
Q Consensus 348 ~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~a 427 (536)
.++++|++..|+...... ..++.+.+++. ..+.++++..|.+.+. +.+++ ...++.+.+|++. .++|..|
T Consensus 223 ~~~~~v~vs~Gs~~~~~~-~~~~~~~~al~-----~~~~~~i~~~g~~~~~-~~~~~--~~~~v~~~~~~p~-~~ll~~~ 292 (392)
T TIGR01426 223 DGRPVVLISLGTVFNNQP-SFYRTCVEAFR-----DLDWHVVLSVGRGVDP-ADLGE--LPPNVEVRQWVPQ-LEILKKA 292 (392)
T ss_pred CCCCEEEEecCccCCCCH-HHHHHHHHHHh-----cCCCeEEEEECCCCCh-hHhcc--CCCCeEEeCCCCH-HHHHhhC
Confidence 456778777776433332 36666666664 2445677777765422 22222 4568999999975 5899999
Q ss_pred CeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 428 DCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 428 Dv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
|++|+++|.+|++||+++|+|+|+++...+++. |+..+.+.|.|..+. +++++.++|+++++ +++.++++.+.+
T Consensus 293 ~~~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~-~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~-~~~~~~~~~~l~ 370 (392)
T TIGR01426 293 DAFITHGGMNSTMEALFNGVPMVAVPQGADQPM-TARRIAELGLGRHLPPEEVTAEKLREAVLAVLS-DPRYAERLRKMR 370 (392)
T ss_pred CEEEECCCchHHHHHHHhCCCEEecCCcccHHH-HHHHHHHCCCEEEeccccCCHHHHHHHHHHHhc-CHHHHHHHHHHH
Confidence 999999999999999999999999998877664 899999999998774 68999999999999 999888888888
Q ss_pred HHhcCCchHHHHHHHHHHHHh
Q 036427 504 LKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 504 ~~~a~~~~~~~i~~~i~~l~~ 524 (536)
..+....+.+++++.|++++.
T Consensus 371 ~~~~~~~~~~~aa~~i~~~~~ 391 (392)
T TIGR01426 371 AEIREAGGARRAADEIEGFLA 391 (392)
T ss_pred HHHHHcCCHHHHHHHHHHhhc
Confidence 877778888999998888764
No 85
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.70 E-value=1.8e-14 Score=145.21 Aligned_cols=355 Identities=16% Similarity=0.127 Sum_probs=229.4
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe-ecccccCCCCCCcchhHHHHHHhhc-cccceeecCCCc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT-DLWSDHTPWPFNQLPRSYNFLVKHG-PLWKMTYYGTAP 219 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~-~~~~~~~~~~~~~~~~~y~~~~~~~-~l~~~~~~~~~~ 219 (536)
|.+|||+++.+.. -..--...|..++.+. + +.+..|+ +.--.+ ......|....+.. |-+..-......
T Consensus 1 m~~~Kv~~I~GTR--PE~iKmapli~~~~~~-~-~~~~~vi~TGQH~d-----~em~~~~le~~~i~~pdy~L~i~~~~~ 71 (383)
T COG0381 1 MKMLKVLTIFGTR--PEAIKMAPLVKALEKD-P-DFELIVIHTGQHRD-----YEMLDQVLELFGIRKPDYDLNIMKPGQ 71 (383)
T ss_pred CCceEEEEEEecC--HHHHHHhHHHHHHHhC-C-CCceEEEEeccccc-----HHHHHHHHHHhCCCCCCcchhccccCC
Confidence 4578999887664 5566777888999987 2 3555444 221110 01111222122222 211111110011
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCCC---c-----cccc
Q 036427 220 RVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLST---C-----HPTW 290 (536)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~~---~-----~~~~ 290 (536)
. ...........+.+++.+.+||+|++++.....++ ..++... +||+..+.....+ . .++.
T Consensus 72 t------l~~~t~~~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa~~~----~IpV~HvEAGlRt~~~~~PEE~NR~l 141 (383)
T COG0381 72 T------LGEITGNIIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAAFYL----KIPVGHVEAGLRTGDLYFPEEINRRL 141 (383)
T ss_pred C------HHHHHHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHHHh----CCceEEEecccccCCCCCcHHHHHHH
Confidence 1 11122334567888999999999999997665443 2233333 4998777653321 1 2234
Q ss_pred ccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCC---CCchHHHHHHcCCCCCCCEEEEecCCCCC--CcH
Q 036427 291 FHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKP---VRPKVELRRELGMDEDLPAVLLMGGGEGM--GPI 365 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~---~~~~~~~r~~lgi~~~~~~il~~gg~~g~--k~~ 365 (536)
....++..+++++..++.|++.|+++++|.++||++-+-.... ..........+-.+.+++++++++-+... +.+
T Consensus 142 ~~~~S~~hfapte~ar~nLl~EG~~~~~IfvtGnt~iDal~~~~~~~~~~~~~~~~~~~~~~~~~iLvT~HRreN~~~~~ 221 (383)
T COG0381 142 TSHLSDLHFAPTEIARKNLLREGVPEKRIFVTGNTVIDALLNTRDRVLEDSKILAKGLDDKDKKYILVTAHRRENVGEPL 221 (383)
T ss_pred HHHhhhhhcCChHHHHHHHHHcCCCccceEEeCChHHHHHHHHHhhhccchhhHHhhhccccCcEEEEEcchhhcccccH
Confidence 5678889999999999999999999999999999875433211 11111122221123445677777664331 455
Q ss_pred HHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHH-HcCCCCCCEEEecChh--hHHHHHhhcCeEEECCChHHHHHH
Q 036427 366 EATARALGNALYDENLGEPIGQVLVICGRNKKLANKL-LSTDWKIPVQVKGFVS--KMEEAMGACDCIITKAGPGTIAEA 442 (536)
Q Consensus 366 ~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l-~~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~sG~~tllEA 442 (536)
.+++.++.+.+. ..++..++.-.-..+.+++.. +.++..++|+++..++ ++..++..|-++++-||+. .=||
T Consensus 222 ~~i~~al~~i~~----~~~~~~viyp~H~~~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~iltDSGgi-qEEA 296 (383)
T COG0381 222 EEICEALREIAE----EYPDVIVIYPVHPRPRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFLILTDSGGI-QEEA 296 (383)
T ss_pred HHHHHHHHHHHH----hCCCceEEEeCCCChhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceEEEecCCch-hhhH
Confidence 666666665554 245565544444444343333 4445566788888764 8889999999999999844 5689
Q ss_pred HHhCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 443 MIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 443 ma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
-.+|+||+++.....+.+ .++.|...++. +.+.+.+++..+++ +++.+++|+.....+....++++|++.+..
T Consensus 297 p~lg~Pvl~lR~~TERPE-----~v~agt~~lvg~~~~~i~~~~~~ll~-~~~~~~~m~~~~npYgdg~as~rIv~~l~~ 370 (383)
T COG0381 297 PSLGKPVLVLRDTTERPE-----GVEAGTNILVGTDEENILDAATELLE-DEEFYERMSNAKNPYGDGNASERIVEILLN 370 (383)
T ss_pred HhcCCcEEeeccCCCCcc-----ceecCceEEeCccHHHHHHHHHHHhh-ChHHHHHHhcccCCCcCcchHHHHHHHHHH
Confidence 999999999997665444 67788888886 88999999999999 999999999999999999999999999987
Q ss_pred HHhhc
Q 036427 522 LVRQR 526 (536)
Q Consensus 522 l~~~~ 526 (536)
...-.
T Consensus 371 ~~~~~ 375 (383)
T COG0381 371 YFDSL 375 (383)
T ss_pred Hhhhc
Confidence 66543
No 86
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.70 E-value=1.7e-15 Score=158.97 Aligned_cols=166 Identities=22% Similarity=0.235 Sum_probs=135.2
Q ss_pred CCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHh
Q 036427 346 MDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMG 425 (536)
Q Consensus 346 i~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~ 425 (536)
+..++++++++.|+.+.. .+++..+.+++. +-+.++++-.|... . ...+...|+...+|++. .+++.
T Consensus 233 ~~~d~~~vyvslGt~~~~--~~l~~~~~~a~~-----~l~~~vi~~~~~~~-~----~~~~~p~n~~v~~~~p~-~~~l~ 299 (406)
T COG1819 233 IPADRPIVYVSLGTVGNA--VELLAIVLEALA-----DLDVRVIVSLGGAR-D----TLVNVPDNVIVADYVPQ-LELLP 299 (406)
T ss_pred hcCCCCeEEEEcCCcccH--HHHHHHHHHHHh-----cCCcEEEEeccccc-c----ccccCCCceEEecCCCH-HHHhh
Confidence 567788888888876644 566677777665 45667666665522 1 22346679999999965 57999
Q ss_pred hcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHH
Q 036427 426 ACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQ 501 (536)
Q Consensus 426 ~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~ 501 (536)
.||++|+++|.+|+.||+.+|+|+|+.|...+|.. |+..+.+.|+|..+. +++.++++|+++|+ ++..++...+
T Consensus 300 ~ad~vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~-nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~-~~~~~~~~~~ 377 (406)
T COG1819 300 RADAVIHHGGAGTTSEALYAGVPLVVIPDGADQPL-NAERVEELGAGIALPFEELTEERLRAAVNEVLA-DDSYRRAAER 377 (406)
T ss_pred hcCEEEecCCcchHHHHHHcCCCEEEecCCcchhH-HHHHHHHcCCceecCcccCCHHHHHHHHHHHhc-CHHHHHHHHH
Confidence 99999999999999999999999999999877765 899999999998875 79999999999999 9999988888
Q ss_pred HHHHhcCCchHHHHHHHHHHHHhhc
Q 036427 502 NALKLARPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 502 ~a~~~a~~~~~~~i~~~i~~l~~~~ 526 (536)
..+......+..++++.|++..+++
T Consensus 378 ~~~~~~~~~g~~~~a~~le~~~~~~ 402 (406)
T COG1819 378 LAEEFKEEDGPAKAADLLEEFAREK 402 (406)
T ss_pred HHHHhhhcccHHHHHHHHHHHHhcc
Confidence 8888888888888999998877764
No 87
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.68 E-value=8e-15 Score=153.24 Aligned_cols=248 Identities=12% Similarity=0.041 Sum_probs=157.1
Q ss_pred hhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc----------cccccccCCEEEEcCHHHHHHHHHhC
Q 036427 244 KYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH----------PTWFHKLVTRCYCPTADVAKRAMKAG 313 (536)
Q Consensus 244 ~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~----------~~~~~~~~d~vi~~S~~~~~~l~~~g 313 (536)
+.+.+++++..|....+ +... ...++++...|..... .+.+.+.+|.+++.|+...+.+.+++
T Consensus 100 ~~~~~i~~~~~P~~~~~----~~~~---~~~~~Vyd~~D~~~~~~~~~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~~~ 172 (373)
T cd04950 100 GFGRPILWYYTPYTLPV----AALL---QASLVVYDCVDDLSAFPGGPPELLEAERRLLKRADLVFTTSPSLYEAKRRLN 172 (373)
T ss_pred CCCCcEEEEeCccHHHH----Hhhc---CCCeEEEEcccchhccCCCCHHHHHHHHHHHHhCCEEEECCHHHHHHHhhCC
Confidence 44556666666664322 2212 1367776655533211 13456789999999999998887765
Q ss_pred CCCCCEEEeCCCCCCCCCCCCCchH-HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEe
Q 036427 314 LQASQIKVYGLPVRPSFVKPVRPKV-ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVIC 392 (536)
Q Consensus 314 ~~~~ki~vignpv~~~~~~~~~~~~-~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~ 392 (536)
.++++++|+++.+.+.+..... ..+.. ...+.++++++|+... +...+++.++++. .+++++++ +
T Consensus 173 ---~~i~~i~ngvd~~~f~~~~~~~~~~~~~--~~~~~~~i~y~G~l~~-~~d~~ll~~la~~-------~p~~~~vl-i 238 (373)
T cd04950 173 ---PNVVLVPNGVDYEHFAAARDPPPPPADL--AALPRPVIGYYGAIAE-WLDLELLEALAKA-------RPDWSFVL-I 238 (373)
T ss_pred ---CCEEEcccccCHHHhhcccccCCChhHH--hcCCCCEEEEEecccc-ccCHHHHHHHHHH-------CCCCEEEE-E
Confidence 6799999999987665432111 01111 2235677888877554 3444566665543 46777644 5
Q ss_pred cCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC--------C-hHHHHHHHHhCCcEEEeccCCccccC
Q 036427 393 GRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA--------G-PGTIAEAMIRGLPIILNDFIAGQEAG 461 (536)
Q Consensus 393 G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s--------G-~~tllEAma~GlPVI~~~~~~~~e~~ 461 (536)
|.++...+ .......+||+++|++ +++..+|+.+|++++|+ + |++++||||||+|||+++.+.
T Consensus 239 G~~~~~~~-~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~----- 312 (373)
T cd04950 239 GPVDVSID-PSALLRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPE----- 312 (373)
T ss_pred CCCcCccC-hhHhccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHH-----
Confidence 66521111 1111224689999998 59999999999999984 2 789999999999999987421
Q ss_pred ChhhHhhCC-ceeec-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 462 NVPYVVENG-CGKFS-KSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 462 na~~lv~~g-~g~~~-~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
+++.+ .+.++ .|+++++++|.+++..+...+.. ++.+.+.+++|+..++.+.+.+.+
T Consensus 313 ----~~~~~~~~~~~~~d~~~~~~ai~~~l~~~~~~~~~---~~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 313 ----VRRYEDEVVLIADDPEEFVAAIEKALLEDGPARER---RRLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred ----HHhhcCcEEEeCCCHHHHHHHHHHHHhcCCchHHH---HHHHHHHHCCHHHHHHHHHHHHHh
Confidence 23332 23344 48999999999976513222222 122267789999999999866654
No 88
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.66 E-value=1.3e-15 Score=155.97 Aligned_cols=300 Identities=16% Similarity=0.139 Sum_probs=154.9
Q ss_pred eEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccch
Q 036427 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQS 225 (536)
Q Consensus 146 KIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~ 225 (536)
||+|.++++|-||..++++++++|++ | |+|.++.......-.....++ . ....+....... .........
T Consensus 1 ril~~~~g~G~GH~~r~~ala~~L~~--g--~ev~~~~~~~~~~~~~~~~~~-~----~~~~p~~~~~~~-~~~~~~~~~ 70 (321)
T TIGR00661 1 KILYSVCGEGFGHTTRSVAIGEALKN--D--YEVSYIASGRSKNYISKYGFK-V----FETFPGIKLKGE-DGKVNIVKT 70 (321)
T ss_pred CEEEEEeccCccHHHHHHHHHHHHhC--C--CeEEEEEcCCHHHhhhhhcCc-c----eeccCCceEeec-CCcCcHHHH
Confidence 79999999977999999999999985 4 566544321110000000000 0 000000010000 000000011
Q ss_pred hhh--hhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEcCH
Q 036427 226 NFA--ATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTA 303 (536)
Q Consensus 226 ~~~--~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~ 303 (536)
... ........+..+++++++||+||+++.+.. ..+++..+ ||.+.+.++....++..+ +. .+.
T Consensus 71 l~~~~~~~~~~~~~~~~~l~~~~pDlVi~d~~~~~---~~aA~~~~----iP~i~i~~q~~~~~~~~~----~~---~~~ 136 (321)
T TIGR00661 71 LRNKEYSPKKAIRREINIIREYNPDLIISDFEYST---VVAAKLLK----IPVICISNQNYTRYPLKT----DL---IVY 136 (321)
T ss_pred HHhhccccHHHHHHHHHHHHhcCCCEEEECCchHH---HHHHHhcC----CCEEEEecchhhcCCccc----ch---hHH
Confidence 100 010123446678899999999999987654 34566665 999877654321111110 10 010
Q ss_pred HHHHHHHHhCCCCCCEEEeCCCC----CCCCC---CCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHh
Q 036427 304 DVAKRAMKAGLQASQIKVYGLPV----RPSFV---KPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNAL 376 (536)
Q Consensus 304 ~~~~~l~~~g~~~~ki~vignpv----~~~~~---~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l 376 (536)
.....+....-..+.+.+...+. .++.. ..+..+....+ + .+.+.+.+++++|+.+. ..++..+.+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~-~~~~~~~iLv~~g~~~~---~~l~~~l~~-- 209 (321)
T TIGR00661 137 PTMAALRIFNERCERFIVPDYPFPYTICPKIIKNMEGPLIRYDVDD-V-DNYGEDYILVYIGFEYR---YKILELLGK-- 209 (321)
T ss_pred HHHHHHHHhccccceEeeecCCCCCCCCccccccCCCcccchhhhc-c-ccCCCCcEEEECCcCCH---HHHHHHHHh--
Confidence 11111111100001110011010 01111 00001111111 1 12244667777765442 333333321
Q ss_pred hhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChh-hHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccC
Q 036427 377 YDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVS-KMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 377 ~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~-~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~ 455 (536)
.+++. +++|......+ ....++.+.+|.+ ++.++|..||++|+++|.+|+.||+++|+|+|++|..
T Consensus 210 ------~~~~~--~i~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~~ad~vI~~~G~~t~~Ea~~~g~P~l~ip~~ 276 (321)
T TIGR00661 210 ------IANVK--FVCYSYEVAKN-----SYNENVEIRRITTDNFKELIKNAELVITHGGFSLISEALSLGKPLIVIPDL 276 (321)
T ss_pred ------CCCeE--EEEeCCCCCcc-----ccCCCEEEEECChHHHHHHHHhCCEEEECCChHHHHHHHHcCCCEEEEcCC
Confidence 23333 34443221111 2346899999984 8999999999999999999999999999999999987
Q ss_pred Cc-cccCChhhHhhCCceeecC--CHHHHHHHHHHHhC
Q 036427 456 AG-QEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFG 490 (536)
Q Consensus 456 ~~-~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~ 490 (536)
+. +|..|+..+.+.|.|..++ +. ++.+++.+.++
T Consensus 277 ~~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~~~~~~ 313 (321)
T TIGR00661 277 GQFEQGNNAVKLEDLGCGIALEYKEL-RLLEAILDIRN 313 (321)
T ss_pred CcccHHHHHHHHHHCCCEEEcChhhH-HHHHHHHhccc
Confidence 53 4456999999999998885 34 44445555544
No 89
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=99.66 E-value=4.1e-14 Score=147.05 Aligned_cols=268 Identities=14% Similarity=0.112 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHhhCCCEEEEcCcccchH-HHHHHHHcCCCCCceEEEEecCCCCc------ccccccccCCEEEEcCHHH
Q 036427 233 FIAREVAKGLMKYQPDIIISVHPLMQHV-PLRILRAKGLLKKIVFTTVITDLSTC------HPTWFHKLVTRCYCPTADV 305 (536)
Q Consensus 233 ~~~~~l~~~l~~~kPDvVi~~~~~~~~i-~~~~~~~~g~~~~ip~v~~~~d~~~~------~~~~~~~~~d~vi~~S~~~ 305 (536)
.....+.+++++++||+|++++.....+ ...++..++ ||++.+....... .++.+.+.++..+++++..
T Consensus 80 ~~~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~~~----IPv~HveaG~rs~~~~eE~~r~~i~~la~l~f~~t~~~ 155 (365)
T TIGR03568 80 LTIIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAALLN----IPIAHIHGGEVTEGAIDESIRHAITKLSHLHFVATEEY 155 (365)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHhC----CcEEEEECCccCCCCchHHHHHHHHHHHhhccCCCHHH
Confidence 3456888899999999999999654433 244455555 9988666543211 2445678889999999999
Q ss_pred HHHHHHhCCCCCCEEEeCCCCCCCCCC-CCCchHHHHHHcCCCCCCCEEEEecCCCC--CCcHHHHHHHHHHHhhhcccC
Q 036427 306 AKRAMKAGLQASQIKVYGLPVRPSFVK-PVRPKVELRRELGMDEDLPAVLLMGGGEG--MGPIEATARALGNALYDENLG 382 (536)
Q Consensus 306 ~~~l~~~g~~~~ki~vignpv~~~~~~-~~~~~~~~r~~lgi~~~~~~il~~gg~~g--~k~~~~~l~al~~~l~~~~~~ 382 (536)
.+.+.+.|.++.++.++||+..+.... ....++.+.++++++.++++++++.-... .....+.+..+.+.+.+.
T Consensus 156 ~~~L~~eg~~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~--- 232 (365)
T TIGR03568 156 RQRVIQMGEDPDRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL--- 232 (365)
T ss_pred HHHHHHcCCCCCcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---
Confidence 999999999999999999987665432 12235677888998755566655544322 222234455555555421
Q ss_pred CCCcEEEEEec-CCH-HHHHHHHcCCC-CCCEEEecCh--hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCc
Q 036427 383 EPIGQVLVICG-RNK-KLANKLLSTDW-KIPVQVKGFV--SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAG 457 (536)
Q Consensus 383 ~~~~~~lvi~G-~~~-~l~~~l~~~~~-~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~ 457 (536)
..++.+++-.+ .+. ...+.+++... .+++.+.+.. .++..+++.||++|+.|+++. .||+++|+|+|.+. .
T Consensus 233 ~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~vitdSSggi-~EA~~lg~Pvv~l~---~ 308 (365)
T TIGR03568 233 NKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADAVIGNSSSGI-IEAPSFGVPTINIG---T 308 (365)
T ss_pred ccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCEEEEcChhHH-HhhhhcCCCEEeec---C
Confidence 11232221112 222 33444444321 4679999976 589999999999999985444 89999999999764 2
Q ss_pred cccCChhhHhhCCceee-cC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHH
Q 036427 458 QEAGNVPYVVENGCGKF-SK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQD 518 (536)
Q Consensus 458 ~e~~na~~lv~~g~g~~-~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~ 518 (536)
.++ .++.|..++ +. +++++.+++.+++ +++.++.+...-..+....++++|++.
T Consensus 309 R~e-----~~~~g~nvl~vg~~~~~I~~a~~~~~--~~~~~~~~~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 309 RQK-----GRLRADSVIDVDPDKEEIVKAIEKLL--DPAFKKSLKNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred Cch-----hhhhcCeEEEeCCCHHHHHHHHHHHh--ChHHHHHHhhCCCCCCCChHHHHHHHh
Confidence 222 455565544 65 8999999999965 455444443322224555677777664
No 90
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.66 E-value=5.1e-15 Score=145.45 Aligned_cols=301 Identities=17% Similarity=0.169 Sum_probs=187.4
Q ss_pred eEEEEe----CCCCchHHHHHHHHHHHHHhccCCceEEEEeec-ccccCCCCCCc-chhHHHHHHhhccccceeecCC-C
Q 036427 146 KVLILM----SDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL-WSDHTPWPFNQ-LPRSYNFLVKHGPLWKMTYYGT-A 218 (536)
Q Consensus 146 KIL~~~----~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~-~~~~~~~~~~~-~~~~y~~~~~~~~l~~~~~~~~-~ 218 (536)
+|+.++ ..+ ||.+.+...|.+.|.+. ||.|++.+- +.+..+..... .-+.|- . .+...+.++ .
T Consensus 2 ~i~mVsdff~P~~-ggveshiy~lSq~li~l---ghkVvvithayg~r~girylt~glkVyy-----l-p~~v~~n~tT~ 71 (426)
T KOG1111|consen 2 RILMVSDFFYPST-GGVESHIYALSQCLIRL---GHKVVVITHAYGNRVGIRYLTNGLKVYY-----L-PAVVGYNQTTF 71 (426)
T ss_pred cceeeCcccccCC-CChhhhHHHhhcchhhc---CCeEEEEeccccCccceeeecCCceEEE-----E-eeeeeecccch
Confidence 566654 556 79999999999999999 888877643 23322221110 000110 0 011111111 1
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCccc--chHHHHHHHHcCCCCCceEEEEecCCC--C---cc----
Q 036427 219 PRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLM--QHVPLRILRAKGLLKKIVFTTVITDLS--T---CH---- 287 (536)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~--~~i~~~~~~~~g~~~~ip~v~~~~d~~--~---~~---- 287 (536)
+... ....-++.++.+++..+||.+.++. ++-.+..++..|+ .. +.+|.+ . .-
T Consensus 72 ptv~----------~~~Pllr~i~lrE~I~ivhghs~fS~lahe~l~hartMGl----kt--VfTdHSlfGfad~~si~~ 135 (426)
T KOG1111|consen 72 PTVF----------SDFPLLRPILLRERIEIVHGHSPFSYLAHEALMHARTMGL----KT--VFTDHSLFGFADIGSILT 135 (426)
T ss_pred hhhh----------ccCcccchhhhhhceEEEecCChHHHHHHHHHHHHHhcCc----eE--EEeccccccccchhhhhh
Confidence 1111 1123445566677999999998753 2334555565662 22 333322 0 00
Q ss_pred c---ccccccCCEEEEcCHHHHHHHH-HhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCC
Q 036427 288 P---TWFHKLVTRCYCPTADVAKRAM-KAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMG 363 (536)
Q Consensus 288 ~---~~~~~~~d~vi~~S~~~~~~l~-~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k 363 (536)
+ ..-....|+++|+|...++... +..++++++.++||.++...+.|...+ + -..+...+.++++....|
T Consensus 136 n~ll~~sL~~id~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~---~----~S~~i~~ivv~sRLvyrK 208 (426)
T KOG1111|consen 136 NKLLPLSLANIDRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAAD---K----PSADIITIVVASRLVYRK 208 (426)
T ss_pred cceeeeeecCCCcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCccc---c----CCCCeeEEEEEeeeeecc
Confidence 1 1223466889999887776533 335788999999999999888774322 0 112224556666665555
Q ss_pred cHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC----
Q 036427 364 PIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---- 434 (536)
Q Consensus 364 ~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---- 434 (536)
+.+.++..+. .+ +.+.|++++ +++|+|+ ++++.+++..+.++|.++|.+ +++.+.|..-|+++.+|
T Consensus 209 GiDll~~iIp-~v---c~~~p~vrf-ii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEa 283 (426)
T KOG1111|consen 209 GIDLLLEIIP-SV---CDKHPEVRF-IIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEA 283 (426)
T ss_pred chHHHHHHHH-HH---HhcCCCeeE-EEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHHHHH
Confidence 5544433333 33 335788886 5568887 567778888889999999998 59999999999999998
Q ss_pred ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHhC
Q 036427 435 GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWFG 490 (536)
Q Consensus 435 G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~ 490 (536)
.+++++|||+||+|||.+..++.+|. ...+.-... ++++++++++++.++
T Consensus 284 fc~~ivEAaScGL~VVsTrVGGIpeV------LP~d~i~~~~~~~~dl~~~v~~ai~ 334 (426)
T KOG1111|consen 284 FCMVIVEAASCGLPVVSTRVGGIPEV------LPEDMITLGEPGPDDLVGAVEKAIT 334 (426)
T ss_pred HHHHHHHHHhCCCEEEEeecCCcccc------CCccceeccCCChHHHHHHHHHHHH
Confidence 58999999999999999998877663 333311122 257777777766665
No 91
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=99.65 E-value=1.1e-13 Score=139.18 Aligned_cols=351 Identities=17% Similarity=0.179 Sum_probs=209.7
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEE-EeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVF-VTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~-v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
+|||.+.++.. .|...-+. |.++|+++.| +++.+ |+...-...+. ..+- .+..+.-.+ ++..
T Consensus 1 ~~ki~i~AGE~-SGDllGa~-LikaLk~~~~-~~efvGvgG~~m~aeG~--~sl~-~~~elsvmG-f~EV---------- 63 (381)
T COG0763 1 MLKIALSAGEA-SGDLLGAG-LIKALKARYP-DVEFVGVGGEKMEAEGL--ESLF-DMEELSVMG-FVEV---------- 63 (381)
T ss_pred CceEEEEeccc-chhhHHHH-HHHHHHhhCC-CeEEEEeccHHHHhccC--cccc-CHHHHHHhh-HHHH----------
Confidence 57999998877 67766555 7899999876 33322 22110001110 0000 000000000 0000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcC-cccchHHHHHHHHcCCCCCceEEEEecC-CCCccc---ccccccCCE
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVH-PLMQHVPLRILRAKGLLKKIVFTTVITD-LSTCHP---TWFHKLVTR 297 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~-~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~~~~---~~~~~~~d~ 297 (536)
. ...+......+++.+.+.+.+||++++.. |-.+.--...+|+.| +++|.++++.- .+.+.+ ..+.+.+|.
T Consensus 64 L--~~lp~llk~~~~~~~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~--p~i~iihYV~PsVWAWr~~Ra~~i~~~~D~ 139 (381)
T COG0763 64 L--GRLPRLLKIRRELVRYILANKPDVLILIDSPDFNLRVAKKLRKAG--PKIKIIHYVSPSVWAWRPKRAVKIAKYVDH 139 (381)
T ss_pred H--HHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCCchHHHHHHHHhC--CCCCeEEEECcceeeechhhHHHHHHHhhH
Confidence 0 01112333456778888899999999865 433322233344444 35888877653 222222 235678999
Q ss_pred EEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhh
Q 036427 298 CYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALY 377 (536)
Q Consensus 298 vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~ 377 (536)
+++..+...+.+.+.|++ .+++|+|+-+... ...+++.+|++++++.+.++++++-|+.+. .+..++..+.++.+
T Consensus 140 lLailPFE~~~y~k~g~~---~~yVGHpl~d~i~-~~~~r~~ar~~l~~~~~~~~lalLPGSR~s-EI~rl~~~f~~a~~ 214 (381)
T COG0763 140 LLAILPFEPAFYDKFGLP---CTYVGHPLADEIP-LLPDREAAREKLGIDADEKTLALLPGSRRS-EIRRLLPPFVQAAQ 214 (381)
T ss_pred eeeecCCCHHHHHhcCCC---eEEeCChhhhhcc-ccccHHHHHHHhCCCCCCCeEEEecCCcHH-HHHHHHHHHHHHHH
Confidence 999999999999999887 7899999877653 223467799999999999999998887653 34444444444444
Q ss_pred hcccCCCCcEEEEEecCCH--HHHHHHHcCC-CCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEecc
Q 036427 378 DENLGEPIGQVLVICGRNK--KLANKLLSTD-WKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 378 ~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~-~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~ 454 (536)
....+.++.++++-.-... .......+.. ....+.+.+ .+-.+.|..||+.+..|| .+.+|++.+|+|+|+.-.
T Consensus 215 ~l~~~~~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~a~~~aD~al~aSG-T~tLE~aL~g~P~Vv~Yk 291 (381)
T COG0763 215 ELKARYPDLKFVLPLVNAKYRRIIEEALKWEVAGLSLILID--GEKRKAFAAADAALAASG-TATLEAALAGTPMVVAYK 291 (381)
T ss_pred HHHhhCCCceEEEecCcHHHHHHHHHHhhccccCceEEecC--chHHHHHHHhhHHHHhcc-HHHHHHHHhCCCEEEEEe
Confidence 3333468888766544332 1112111111 112333333 245789999999999998 667899999999999876
Q ss_pred CCccccCChhhHhhCCceee---------cC-------CHHHHHHHHHHHhCCCHHHHHHHHHHHHH---hcCCc-hHHH
Q 036427 455 IAGQEAGNVPYVVENGCGKF---------SK-------SPKEIANMVSQWFGPKIDELKAMSQNALK---LARPD-AVFR 514 (536)
Q Consensus 455 ~~~~e~~na~~lv~~g~g~~---------~~-------d~~~La~~I~~ll~~d~~~~~~m~~~a~~---~a~~~-~~~~ 514 (536)
...-...-+..++.-....+ ++ .++.|++++..++. |.+.++++.+..++ ..+.. ..+.
T Consensus 292 ~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~-~~~~~~~~~~~~~~l~~~l~~~~~~e~ 370 (381)
T COG0763 292 VKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLL-NGDRREALKEKFRELHQYLREDPASEI 370 (381)
T ss_pred ccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhc-ChHhHHHHHHHHHHHHHHHcCCcHHHH
Confidence 43322222233333222111 11 69999999999999 88666666665443 33445 6777
Q ss_pred HHHHHHHHHh
Q 036427 515 IVQDLHELVR 524 (536)
Q Consensus 515 i~~~i~~l~~ 524 (536)
.++.+.+++.
T Consensus 371 aA~~vl~~~~ 380 (381)
T COG0763 371 AAQAVLELLL 380 (381)
T ss_pred HHHHHHHHhc
Confidence 7777777654
No 92
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.64 E-value=6.5e-14 Score=137.79 Aligned_cols=357 Identities=16% Similarity=0.184 Sum_probs=210.3
Q ss_pred CCCCCceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCC-CcchhHHHHHHhhcccccee--ec
Q 036427 140 ENDQPKKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPF-NQLPRSYNFLVKHGPLWKMT--YY 215 (536)
Q Consensus 140 ~~~~~mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~-~~~~~~y~~~~~~~~l~~~~--~~ 215 (536)
++.++|||+|.+.+ +|-||.++++.+|.+|.+... +.+|++++......+++. .++. .++.+++++.. .+
T Consensus 5 ~~~~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~-~~~Il~IsG~~~~~~F~~~~gVd-----~V~LPsl~k~~~G~~ 78 (400)
T COG4671 5 EASKRPRILFYSHDLLGLGHLRRALRIAHALVEDYL-GFDILIISGGPPAGGFPGPAGVD-----FVKLPSLIKGDNGEY 78 (400)
T ss_pred chhccceEEEEehhhccchHHHHHHHHHHHHhhccc-CceEEEEeCCCccCCCCCcccCc-----eEecCceEecCCCce
Confidence 56677899999976 678999999999999999744 799999987666554443 2222 12333332211 00
Q ss_pred CCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcC-ccc---chHHH-HHHHHcCCCCCceEEEEecCCCCc----
Q 036427 216 GTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVH-PLM---QHVPL-RILRAKGLLKKIVFTTVITDLSTC---- 286 (536)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~-~~~---~~i~~-~~~~~~g~~~~ip~v~~~~d~~~~---- 286 (536)
....... . ..-...+...-+.+..+.+|||++|+.. |+- --.|+ ...+..+ .+.+...+|..+.
T Consensus 79 ~~~d~~~--~-l~e~~~~Rs~lil~t~~~fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~----t~~vL~lr~i~D~p~~~ 151 (400)
T COG4671 79 GLVDLDG--D-LEETKKLRSQLILSTAETFKPDIFIVDKFPFGLRFELLPTLEYLKTTG----TRLVLGLRSIRDIPQEL 151 (400)
T ss_pred eeeecCC--C-HHHHHHHHHHHHHHHHHhcCCCEEEEeccccchhhhhhHHHHHHhhcC----CcceeehHhhhhchhhh
Confidence 0000000 0 0001112223455667889999999875 221 11122 2234333 2333333333221
Q ss_pred --------ccccccccCCEEEEcCHHHHHHHHH-hCCC---CCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEE
Q 036427 287 --------HPTWFHKLVTRCYCPTADVAKRAMK-AGLQ---ASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVL 354 (536)
Q Consensus 287 --------~~~~~~~~~d~vi~~S~~~~~~l~~-~g~~---~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il 354 (536)
.-..+.++.|.|++..+.....+.+ +.++ ..++..+|.--.+ .-....+..+ -++...+++
T Consensus 152 ~~~w~~~~~~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~-~~~~~~p~~~------~pE~~~Ilv 224 (400)
T COG4671 152 EADWRRAETVRLINRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRS-LPHLPLPPHE------APEGFDILV 224 (400)
T ss_pred ccchhhhHHHHHHHHhheEEEEecCccccChhhcCCccHhhhhheeEeEEeecc-CcCCCCCCcC------CCccceEEE
Confidence 1134567889998866555444433 4443 3566666654111 1000000000 022233444
Q ss_pred EecCCCCCCcHHHHHHHHHHHhhhcccCCCCcE--EEEEecCC-H-HHHHHHHcC-CCCCCEEEecChhhHHHHHhhcCe
Q 036427 355 LMGGGEGMGPIEATARALGNALYDENLGEPIGQ--VLVICGRN-K-KLANKLLST-DWKIPVQVKGFVSKMEEAMGACDC 429 (536)
Q Consensus 355 ~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~--~lvi~G~~-~-~l~~~l~~~-~~~~~V~~~G~v~~l~~ll~~aDv 429 (536)
.+||+.. -.+++.+++.+... .+++. .+++.|.. + ..++++... ...++|++..|..++..++..|+.
T Consensus 225 s~GGG~d---G~eLi~~~l~A~~~----l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~ 297 (400)
T COG4671 225 SVGGGAD---GAELIETALAAAQL----LAGLNHKWLIVTGPFMPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL 297 (400)
T ss_pred ecCCChh---hHHHHHHHHHHhhh----CCCCCcceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe
Confidence 4555322 24555555554431 23333 46777864 3 345555443 455789999999999999999999
Q ss_pred EEECCChHHHHHHHHhCCcEEEeccCCccc--cCChhhHhhCCceeec-C---CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 430 IITKAGPGTIAEAMIRGLPIILNDFIAGQE--AGNVPYVVENGCGKFS-K---SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 430 ~V~~sG~~tllEAma~GlPVI~~~~~~~~e--~~na~~lv~~g~g~~~-~---d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
+|+-+|.+|++|-+++|||.+++|.....| .--+..+.+.|..-++ + +++.|+++|...++ .|.. .
T Consensus 298 vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~-~P~~-------~ 369 (400)
T COG4671 298 VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALA-RPSP-------S 369 (400)
T ss_pred eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhccc-CCCC-------C
Confidence 999999999999999999999999875543 2336667777765544 3 78999999988887 3321 1
Q ss_pred HHhcCCchHHHHHHHHHHHHhhcCCcCC
Q 036427 504 LKLARPDAVFRIVQDLHELVRQRNFVPH 531 (536)
Q Consensus 504 ~~~a~~~~~~~i~~~i~~l~~~~~~~~~ 531 (536)
.....-.+.+++++.+.+++.+++.-+-
T Consensus 370 ~~~L~L~G~~~~a~~l~e~L~~~~~~~~ 397 (400)
T COG4671 370 KPHLDLEGLEHIARILAELLSTRSCEML 397 (400)
T ss_pred ccccCchhhHhHHHHHHHHhhhhccccC
Confidence 1233446888888888888887765543
No 93
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.63 E-value=6.1e-13 Score=141.52 Aligned_cols=281 Identities=12% Similarity=0.040 Sum_probs=175.0
Q ss_pred HHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC--CCC--------cc----------------
Q 036427 234 IAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD--LST--------CH---------------- 287 (536)
Q Consensus 234 ~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d--~~~--------~~---------------- 287 (536)
....+.+.+...++|++|+|. |+.+..+..+++... ++|.|...|. +.. .+
T Consensus 136 ~i~~~~~~~~~~~~dViH~He-Wm~g~a~~~lK~~~~--~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~ 212 (590)
T cd03793 136 FLGEFAEQFDDEPAVVAHFHE-WQAGVGLPLLRKRKV--DVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRG 212 (590)
T ss_pred HHHHHHhhccCCCCeEEEEcc-hhHhHHHHHHHHhCC--CCCEEEEecccccccccccCCcccchhhhhcchhhhhhccc
Confidence 333444443345789998764 555555666665432 4788754441 111 01
Q ss_pred -------cccccccCCEEEEcCHHHHHHHHHh-CCCCCCEEEeCCCCCCCCCCCCCc----------------hHHHHHH
Q 036427 288 -------PTWFHKLVTRCYCPTADVAKRAMKA-GLQASQIKVYGLPVRPSFVKPVRP----------------KVELRRE 343 (536)
Q Consensus 288 -------~~~~~~~~d~vi~~S~~~~~~l~~~-g~~~~ki~vignpv~~~~~~~~~~----------------~~~~r~~ 343 (536)
.++....+|.++++|+.+++.+... +.++++ |+||++++..+....+ +..++..
T Consensus 213 I~~r~~iE~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~ 290 (590)
T cd03793 213 IYHRYCIERAAAHCAHVFTTVSEITAYEAEHLLKRKPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGH 290 (590)
T ss_pred chHHHHHHHHHHhhCCEEEECChHHHHHHHHHhCCCCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhh
Confidence 1245678899999999999998874 777766 9999999988764421 1234566
Q ss_pred cCCCCCCCEEEEe-cCCCC-CCcHHHHHHHHHHHhhhcccCCCCcE---EEEEecC-C---------HH----HHHHHHc
Q 036427 344 LGMDEDLPAVLLM-GGGEG-MGPIEATARALGNALYDENLGEPIGQ---VLVICGR-N---------KK----LANKLLS 404 (536)
Q Consensus 344 lgi~~~~~~il~~-gg~~g-~k~~~~~l~al~~~l~~~~~~~~~~~---~lvi~G~-~---------~~----l~~~l~~ 404 (536)
+++++++++++++ |+-.- .|+.+.+++++.+.-........+.. ++++.+. + .. +++.+.+
T Consensus 291 ~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~ 370 (590)
T cd03793 291 YDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNS 370 (590)
T ss_pred cCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHH
Confidence 7888888888774 66544 57777777777654332111223222 3334332 1 01 1111100
Q ss_pred -------------------------------------------------------------------CCC----CCC--E
Q 036427 405 -------------------------------------------------------------------TDW----KIP--V 411 (536)
Q Consensus 405 -------------------------------------------------------------------~~~----~~~--V 411 (536)
.++ .++ |
T Consensus 371 i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkv 450 (590)
T cd03793 371 VKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKV 450 (590)
T ss_pred HHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEE
Confidence 000 112 4
Q ss_pred EEecC-h--------hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCC--ceeecC
Q 036427 412 QVKGF-V--------SKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENG--CGKFSK 476 (536)
Q Consensus 412 ~~~G~-v--------~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g--~g~~~~ 476 (536)
.|.+. + .+..++|+.||++|.|| | |.+++|||+||+|+|+++..+-.+ .+..++..+ .|+.+.
T Consensus 451 if~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~--~v~E~v~~~~~~gi~V~ 528 (590)
T cd03793 451 VFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGC--FMEEHIEDPESYGIYIV 528 (590)
T ss_pred EEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhh--hhHHHhccCCCceEEEe
Confidence 44442 2 14789999999999999 4 899999999999999999765422 122344332 355442
Q ss_pred ---------CHHHHHHHHHHHhCCCHHHHHHHHHHHH--HhcCCchHHHHHHHHHHHH
Q 036427 477 ---------SPKEIANMVSQWFGPKIDELKAMSQNAL--KLARPDAVFRIVQDLHELV 523 (536)
Q Consensus 477 ---------d~~~La~~I~~ll~~d~~~~~~m~~~a~--~~a~~~~~~~i~~~i~~l~ 523 (536)
+.++|+++|.++++ . +.++.+.++++ +.+..+.|++.+..+.+..
T Consensus 529 ~r~~~~~~e~v~~La~~m~~~~~-~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~ 584 (590)
T cd03793 529 DRRFKSPDESVQQLTQYMYEFCQ-L-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKAR 584 (590)
T ss_pred cCCccchHHHHHHHHHHHHHHhC-C-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 57889999999887 4 45666666655 7888899999998887654
No 94
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.62 E-value=1.6e-14 Score=154.81 Aligned_cols=262 Identities=12% Similarity=0.110 Sum_probs=171.2
Q ss_pred CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCCC-----cccc---cc--cccCCEEEEcCHHHHHHHHHh--
Q 036427 246 QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLST-----CHPT---WF--HKLVTRCYCPTADVAKRAMKA-- 312 (536)
Q Consensus 246 kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~-----~~~~---~~--~~~~d~vi~~S~~~~~~l~~~-- 312 (536)
..|+|+++.+.+..+|..+ ++.+ .+.|+..+.| .+.. +.+. .+ .-.+|.+...+....+.+...
T Consensus 131 ~~d~iwihDyhl~llp~~l-r~~~--~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~ 207 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQML-RERG--PDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCS 207 (460)
T ss_pred CCCEEEEeChhhhHHHHHH-HhhC--CCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHH
Confidence 4589999988666666544 3333 2356665444 4321 1111 01 124788888887666554441
Q ss_pred ---CC------------CCCCEEEeCCCCCCCCCCCCCc----hHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHH
Q 036427 313 ---GL------------QASQIKVYGLPVRPSFVKPVRP----KVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALG 373 (536)
Q Consensus 313 ---g~------------~~~ki~vignpv~~~~~~~~~~----~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~ 373 (536)
+. ...++.++++++|++.+.+... ++.+++..+..++.++|+++|+....|++..+++++.
T Consensus 208 ~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~ 287 (460)
T cd03788 208 RLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFE 287 (460)
T ss_pred HHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHH
Confidence 11 1235789999999876653321 1223344555667788889999888899888888886
Q ss_pred HHhhhcccCCCC----cEEEEEec----CCH---HHHHHHHcC----CC------CCCEEE-ecCh--hhHHHHHhhcCe
Q 036427 374 NALYDENLGEPI----GQVLVICG----RNK---KLANKLLST----DW------KIPVQV-KGFV--SKMEEAMGACDC 429 (536)
Q Consensus 374 ~~l~~~~~~~~~----~~~lvi~G----~~~---~l~~~l~~~----~~------~~~V~~-~G~v--~~l~~ll~~aDv 429 (536)
..+. ..|+ +.++++++ .++ ++.+.++++ +. ..+|.+ .|++ +++.++|+.||+
T Consensus 288 ~ll~----~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv 363 (460)
T cd03788 288 RLLE----RYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADV 363 (460)
T ss_pred HHHH----hChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccE
Confidence 6554 2343 34444432 222 233333322 11 123544 4654 699999999999
Q ss_pred EEECC---C-hHHHHHHHHhCCc----EEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHH
Q 036427 430 IITKA---G-PGTIAEAMIRGLP----IILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAM 499 (536)
Q Consensus 430 ~V~~s---G-~~tllEAma~GlP----VI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m 499 (536)
+|+|| | +++++|||+||+| +|+++..+..+. ...|.+++ |+++++++|.++++++++.++.+
T Consensus 364 ~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~--------~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~ 435 (460)
T cd03788 364 ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE--------LSGALLVNPYDIDEVADAIHRALTMPLEERRER 435 (460)
T ss_pred EEeCccccccCcccceeEEEecCCCceEEEeccccchhh--------cCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHH
Confidence 99998 5 8999999999999 888875543332 23455654 99999999999998556788999
Q ss_pred HHHHHHhcCCchHHHHHHHHHHH
Q 036427 500 SQNALKLARPDAVFRIVQDLHEL 522 (536)
Q Consensus 500 ~~~a~~~a~~~~~~~i~~~i~~l 522 (536)
++++++....+.++++++.++.-
T Consensus 436 ~~~~~~~v~~~~~~~w~~~~l~~ 458 (460)
T cd03788 436 HRKLREYVRTHDVQAWANSFLDD 458 (460)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHh
Confidence 99999999999999998887654
No 95
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=99.60 E-value=4.4e-13 Score=137.89 Aligned_cols=259 Identities=17% Similarity=0.196 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHhhCCCEEEEcC-cccchHHHHHHHHcCCCCCceEEEEec-CCCCccc---ccccccCCEEEEcCHHHHH
Q 036427 233 FIAREVAKGLMKYQPDIIISVH-PLMQHVPLRILRAKGLLKKIVFTTVIT-DLSTCHP---TWFHKLVTRCYCPTADVAK 307 (536)
Q Consensus 233 ~~~~~l~~~l~~~kPDvVi~~~-~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~~~~---~~~~~~~d~vi~~S~~~~~ 307 (536)
...+++.+.+++.+||+||..+ |-.+.--...+++.|. ++|+++++. ..+.+.+ +.+.+.+|.++|..+...+
T Consensus 69 ~~~~~~~~~~~~~~pd~vIlID~pgFNlrlak~lk~~~~--~~~viyYI~PqvWAWr~~R~~~i~~~~D~ll~ifPFE~~ 146 (373)
T PF02684_consen 69 RLFRKLVERIKEEKPDVVILIDYPGFNLRLAKKLKKRGI--PIKVIYYISPQVWAWRPGRAKKIKKYVDHLLVIFPFEPE 146 (373)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCccHHHHHHHHHhCC--CceEEEEECCceeeeCccHHHHHHHHHhheeECCcccHH
Confidence 4456888889999999998755 4333222334455552 245776665 3332222 3467889999999999999
Q ss_pred HHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcE
Q 036427 308 RAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQ 387 (536)
Q Consensus 308 ~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~ 387 (536)
.+.++|++ +.++|||+-+...... ++...++.+ ++++.++|.++.|+.. ..+..++..+.+.........++.+
T Consensus 147 ~y~~~g~~---~~~VGHPl~d~~~~~~-~~~~~~~~~-l~~~~~iIaLLPGSR~-~EI~rllP~~l~aa~~l~~~~p~l~ 220 (373)
T PF02684_consen 147 FYKKHGVP---VTYVGHPLLDEVKPEP-DRAEAREKL-LDPDKPIIALLPGSRK-SEIKRLLPIFLEAAKLLKKQRPDLQ 220 (373)
T ss_pred HHhccCCC---eEEECCcchhhhccCC-CHHHHHHhc-CCCCCcEEEEeCCCCH-HHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 99999865 8899999877654332 345666777 8999999988888754 2344444444444433333568888
Q ss_pred EEEEecCCH--H-HHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChh
Q 036427 388 VLVICGRNK--K-LANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVP 464 (536)
Q Consensus 388 ~lvi~G~~~--~-l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~ 464 (536)
+++.+.... + +.+.+..... ++.+.-..++..++|+.||+.+..|| ++.+|++.+|+|.|+.-....-...-++
T Consensus 221 fvvp~a~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~m~~ad~al~~SG-TaTLE~Al~g~P~Vv~Yk~~~lt~~iak 297 (373)
T PF02684_consen 221 FVVPVAPEVHEELIEEILAEYPP--DVSIVIIEGESYDAMAAADAALAASG-TATLEAALLGVPMVVAYKVSPLTYFIAK 297 (373)
T ss_pred EEEecCCHHHHHHHHHHHHhhCC--CCeEEEcCCchHHHHHhCcchhhcCC-HHHHHHHHhCCCEEEEEcCcHHHHHHHH
Confidence 766544332 1 1222333222 22222223467899999999999998 6678999999999998765433333344
Q ss_pred hHhhCCceeec-------------C---CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 465 YVVENGCGKFS-------------K---SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 465 ~lv~~g~g~~~-------------~---d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
.+++-..-.+. . +++.+++.+..++. |++.++......
T Consensus 298 ~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~-~~~~~~~~~~~~ 351 (373)
T PF02684_consen 298 RLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLE-NPEKRKKQKELF 351 (373)
T ss_pred HhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhc-CHHHHHHHHHHH
Confidence 45443222111 1 79999999999999 887655444433
No 96
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.60 E-value=1.3e-14 Score=134.11 Aligned_cols=160 Identities=21% Similarity=0.284 Sum_probs=121.4
Q ss_pred hHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEE
Q 036427 337 KVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQV 413 (536)
Q Consensus 337 ~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~ 413 (536)
++..+...+.+.++++++++|+....++...++.++.....+ ..+++. ++++|.+. .+....+......++.+
T Consensus 2 ~~~~~~~~~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~---~~~~~~-l~i~G~~~~~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 2 KDKLREKLKIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEK---KNPNYK-LVIVGDGEYKKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp HHHHHHHTTT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHH---HHTTEE-EEEESHCCHHHHHHHHHHHTTCGTTEEE
T ss_pred hHHHHHHcCCCCCCeEEEEEecCccccCHHHHHHHHHHHHhh---cCCCeE-EEEEcccccccccccccccccccccccc
Confidence 456777888888888999999888888888888877665421 024554 56667443 34555666678889999
Q ss_pred ecChh--hHHHHHhhcCeEEECC----ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHH
Q 036427 414 KGFVS--KMEEAMGACDCIITKA----GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMV 485 (536)
Q Consensus 414 ~G~v~--~l~~ll~~aDv~V~~s----G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I 485 (536)
.|+.+ ++.++|+.||++|++| +|.+++|||++|+|+|+++.++..+ .+.+...|.+++ ++++++++|
T Consensus 78 ~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e-----~~~~~~~g~~~~~~~~~~l~~~i 152 (172)
T PF00534_consen 78 LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNE-----IINDGVNGFLFDPNDIEELADAI 152 (172)
T ss_dssp EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHH-----HSGTTTSEEEESTTSHHHHHHHH
T ss_pred cccccccccccccccceeccccccccccccccccccccccceeeccccCCce-----eeccccceEEeCCCCHHHHHHHH
Confidence 99996 9999999999999997 4899999999999999999544333 233444577775 789999999
Q ss_pred HHHhCCCHHHHHHHHHHHHHh
Q 036427 486 SQWFGPKIDELKAMSQNALKL 506 (536)
Q Consensus 486 ~~ll~~d~~~~~~m~~~a~~~ 506 (536)
..+++ +++.++.|+++++++
T Consensus 153 ~~~l~-~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 153 EKLLN-DPELRQKLGKNARER 172 (172)
T ss_dssp HHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHC-CHHHHHHHHHHhcCC
Confidence 99999 999999999999874
No 97
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.60 E-value=2.4e-13 Score=144.82 Aligned_cols=261 Identities=16% Similarity=0.194 Sum_probs=172.8
Q ss_pred hhCC-CEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCCC-----ccc--ccc---cccCCEEEEcCHHHHHHHHH
Q 036427 244 KYQP-DIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLST-----CHP--TWF---HKLVTRCYCPTADVAKRAMK 311 (536)
Q Consensus 244 ~~kP-DvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~-----~~~--~~~---~~~~d~vi~~S~~~~~~l~~ 311 (536)
..+| |+|.++..-+..+|..+ ++.+. +.++..+.| -+.. ..+ ..+ .-.+|.+-..+....+.+..
T Consensus 124 ~~~~~d~vwvhDYhl~l~p~~l-r~~~~--~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~ 200 (456)
T TIGR02400 124 LLQPGDIVWVHDYHLMLLPAML-RELGV--QNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLS 200 (456)
T ss_pred hCCCCCEEEEecchhhHHHHHH-HhhCC--CCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 3444 68888877665555544 44332 245544443 2211 111 011 23578888888888877665
Q ss_pred h-----CC-----------CCCCEEEeCCCCCCCCCCCCCch-------HHHHHHcCCCCCCCEEEEecCCCCCCcHHHH
Q 036427 312 A-----GL-----------QASQIKVYGLPVRPSFVKPVRPK-------VELRRELGMDEDLPAVLLMGGGEGMGPIEAT 368 (536)
Q Consensus 312 ~-----g~-----------~~~ki~vignpv~~~~~~~~~~~-------~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~ 368 (536)
. |+ ...++.++++++|.+.+.+.... ..+|+++ .++++|+.+|+....|++...
T Consensus 201 ~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VgRLd~~KGi~~l 277 (456)
T TIGR02400 201 AVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESL---KGRKLIIGVDRLDYSKGLPER 277 (456)
T ss_pred HHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHc---CCCeEEEEccccccccCHHHH
Confidence 2 22 23357799999998876432111 1345555 356788889988888999888
Q ss_pred HHHHHHHhhhcccCCCC----cEEEEEe----cCCH---HHHHHHHcC-----------CCCCCEEEec-Ch--hhHHHH
Q 036427 369 ARALGNALYDENLGEPI----GQVLVIC----GRNK---KLANKLLST-----------DWKIPVQVKG-FV--SKMEEA 423 (536)
Q Consensus 369 l~al~~~l~~~~~~~~~----~~~lvi~----G~~~---~l~~~l~~~-----------~~~~~V~~~G-~v--~~l~~l 423 (536)
++++...+. .+|+ ..+++++ |.++ ++++.+++. ++. .+++.+ .+ +++.++
T Consensus 278 l~A~~~ll~----~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~-pv~~l~~~~~~~el~al 352 (456)
T TIGR02400 278 LLAFERFLE----EHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWT-PIRYLNRSYDREELMAL 352 (456)
T ss_pred HHHHHHHHH----hCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCc-cEEEEcCCCCHHHHHHH
Confidence 888876654 2343 3344444 2333 233344332 111 244444 43 699999
Q ss_pred HhhcCeEEECC---C-hHHHHHHHHhCCc----EEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCH
Q 036427 424 MGACDCIITKA---G-PGTIAEAMIRGLP----IILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKI 493 (536)
Q Consensus 424 l~~aDv~V~~s---G-~~tllEAma~GlP----VI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~ 493 (536)
|+.||+++++| | +++++||||||+| +|++...+..+ .+ . .|.+++ |+++++++|.+++++++
T Consensus 353 y~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~-----~l-~--~gllVnP~d~~~lA~aI~~aL~~~~ 424 (456)
T TIGR02400 353 YRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQ-----EL-N--GALLVNPYDIDGMADAIARALTMPL 424 (456)
T ss_pred HHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChH-----Hh-C--CcEEECCCCHHHHHHHHHHHHcCCH
Confidence 99999999998 5 8999999999999 99988655333 23 2 456664 99999999999999778
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 036427 494 DELKAMSQNALKLARPDAVFRIVQDLHELV 523 (536)
Q Consensus 494 ~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~ 523 (536)
+.++++.++.+++...+.+.++++.+++.+
T Consensus 425 ~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 425 EEREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 889999999999988899999998877654
No 98
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.58 E-value=2.2e-13 Score=140.18 Aligned_cols=232 Identities=18% Similarity=0.221 Sum_probs=151.9
Q ss_pred HHHHHHHhhCC-CEEEEcCcccch--HHHHHHHHcCCCCCceEEEEecCCCCcc----------cccccccCCEEEEcCH
Q 036427 237 EVAKGLMKYQP-DIIISVHPLMQH--VPLRILRAKGLLKKIVFTTVITDLSTCH----------PTWFHKLVTRCYCPTA 303 (536)
Q Consensus 237 ~l~~~l~~~kP-DvVi~~~~~~~~--i~~~~~~~~g~~~~ip~v~~~~d~~~~~----------~~~~~~~~d~vi~~S~ 303 (536)
++.+++...+| |+||.+.|.... ++..+.++.... ++|++..+||+.... ..++.+.+|.++++|+
T Consensus 54 ~~~~~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~-~~k~i~~ihD~~~~~~~~~~~~~~~~~~~~~~aD~iI~~S~ 132 (333)
T PRK09814 54 RLDGILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKK-QVKIIILIHDIEPLRFDSNYYLMKEEIDMLNLADVLIVHSK 132 (333)
T ss_pred HHHHHHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHc-CCEEEEEECCcHHHhccccchhhHHHHHHHHhCCEEEECCH
Confidence 45566788888 999998876543 122222221111 389999999875311 1356788999999999
Q ss_pred HHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCC
Q 036427 304 DVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGE 383 (536)
Q Consensus 304 ~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~ 383 (536)
.+++.+.+.|++..++.++++......... +. .....+.++++|+.... .. +.+ ..
T Consensus 133 ~~~~~l~~~g~~~~~i~~~~~~~~~~~~~~---~~-------~~~~~~~i~yaG~l~k~----~~---l~~-------~~ 188 (333)
T PRK09814 133 KMKDRLVEEGLTTDKIIVQGIFDYLNDIEL---VK-------TPSFQKKINFAGNLEKS----PF---LKN-------WS 188 (333)
T ss_pred HHHHHHHHcCCCcCceEecccccccccccc---cc-------cccCCceEEEecChhhc----hH---HHh-------cC
Confidence 999999999988778877765433211110 00 11234567777664311 11 111 12
Q ss_pred CCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCe-EEEC--------------CChHHHHHHHHhC
Q 036427 384 PIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDC-IITK--------------AGPGTIAEAMIRG 446 (536)
Q Consensus 384 ~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv-~V~~--------------sG~~tllEAma~G 446 (536)
++++ ++++|.+++.. ...++|+|.|++ +++..+|+. |+ +|.. ..|..+.|+|+||
T Consensus 189 ~~~~-l~i~G~g~~~~------~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G 260 (333)
T PRK09814 189 QGIK-LTVFGPNPEDL------ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG 260 (333)
T ss_pred CCCe-EEEECCCcccc------ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC
Confidence 4565 45678876321 234689999998 488888887 43 3321 1267899999999
Q ss_pred CcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC
Q 036427 447 LPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARP 509 (536)
Q Consensus 447 lPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~ 509 (536)
+|||+.+..+ .++.+.+.++|+++++.+++++++..+ +++.+++|++++++.+..
T Consensus 261 ~PVI~~~~~~-----~~~~V~~~~~G~~v~~~~el~~~l~~~---~~~~~~~m~~n~~~~~~~ 315 (333)
T PRK09814 261 LPVIVWSKAA-----IADFIVENGLGFVVDSLEELPEIIDNI---TEEEYQEMVENVKKISKL 315 (333)
T ss_pred CCEEECCCcc-----HHHHHHhCCceEEeCCHHHHHHHHHhc---CHHHHHHHHHHHHHHHHH
Confidence 9999987433 334466788899999999999999885 457788899998886543
No 99
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=99.53 E-value=6e-12 Score=135.92 Aligned_cols=174 Identities=13% Similarity=0.072 Sum_probs=129.0
Q ss_pred HHHHHHcCCCCCCCEEEEecCCCCC--CcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEec
Q 036427 338 VELRRELGMDEDLPAVLLMGGGEGM--GPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKG 415 (536)
Q Consensus 338 ~~~r~~lgi~~~~~~il~~gg~~g~--k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G 415 (536)
+++.+.+.- ..+++|++..|+... .-..+.+..+.+++.. .+.++++..+.... . .+..+||.+.+
T Consensus 285 ~~l~~fl~~-~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~-----l~~~viw~~~~~~~--~----~~~p~Nv~i~~ 352 (507)
T PHA03392 285 DYLEEFLNN-STNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKK-----LPYNVLWKYDGEVE--A----INLPANVLTQK 352 (507)
T ss_pred HHHHHHHhc-CCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHh-----CCCeEEEEECCCcC--c----ccCCCceEEec
Confidence 344444322 223577777776432 1234566667666652 23566665553221 1 23567999999
Q ss_pred ChhhHHHHH--hhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHh
Q 036427 416 FVSKMEEAM--GACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWF 489 (536)
Q Consensus 416 ~v~~l~~ll--~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll 489 (536)
|++. .++| ..++++|+++|.+++.||+.+|+|+|++|...+|.. |+..+++.|+|..++ +.++|.++|.+++
T Consensus 353 w~Pq-~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~-Na~rv~~~G~G~~l~~~~~t~~~l~~ai~~vl 430 (507)
T PHA03392 353 WFPQ-RAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFY-NTNKYVELGIGRALDTVTVSAAQLVLAIVDVI 430 (507)
T ss_pred CCCH-HHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHH-HHHHHHHcCcEEEeccCCcCHHHHHHHHHHHh
Confidence 9975 6778 569999999999999999999999999999988875 999999999998774 7899999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCC--chHHHHHHHHHHHHhhc
Q 036427 490 GPKIDELKAMSQNALKLARP--DAVFRIVQDLHELVRQR 526 (536)
Q Consensus 490 ~~d~~~~~~m~~~a~~~a~~--~~~~~i~~~i~~l~~~~ 526 (536)
+ ||++++++.+.++.+..+ .+.++.+.-++.+++.+
T Consensus 431 ~-~~~y~~~a~~ls~~~~~~p~~~~~~av~~iE~v~r~~ 468 (507)
T PHA03392 431 E-NPKYRKNLKELRHLIRHQPMTPLHKAIWYTEHVIRNK 468 (507)
T ss_pred C-CHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCC
Confidence 9 999999998888776654 47788888887777654
No 100
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=99.53 E-value=9.6e-14 Score=142.98 Aligned_cols=270 Identities=16% Similarity=0.125 Sum_probs=160.4
Q ss_pred HHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecC-----CC-----CcccccccccCCEEEEc
Q 036427 233 FIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITD-----LS-----TCHPTWFHKLVTRCYCP 301 (536)
Q Consensus 233 ~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d-----~~-----~~~~~~~~~~~d~vi~~ 301 (536)
.....+.+.+.+.+||+|++.+.....+. ..++..++ ||++.+... .. ...+..+.+.++..+++
T Consensus 54 ~~~~~~~~~~~~~~Pd~Vlv~GD~~~~la~alaA~~~~----ipv~HieaGlRs~d~~~g~~de~~R~~i~~la~lhf~~ 129 (346)
T PF02350_consen 54 LAIIELADVLEREKPDAVLVLGDRNEALAAALAAFYLN----IPVAHIEAGLRSGDRTEGMPDEINRHAIDKLAHLHFAP 129 (346)
T ss_dssp HHHHHHHHHHHHHT-SEEEEETTSHHHHHHHHHHHHTT-----EEEEES-----S-TTSSTTHHHHHHHHHHH-SEEEES
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHHHHHhC----CCEEEecCCCCccccCCCCchhhhhhhhhhhhhhhccC
Confidence 34567888999999999999997655443 33344444 998766543 21 02235567899999999
Q ss_pred CHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCC-CCchHHH-HHHcCCCCCCCEEEEecCCCCCCcH---HHHHHHHHHHh
Q 036427 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFVKP-VRPKVEL-RRELGMDEDLPAVLLMGGGEGMGPI---EATARALGNAL 376 (536)
Q Consensus 302 S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~-~~~~~~~-r~~lgi~~~~~~il~~gg~~g~k~~---~~~l~al~~~l 376 (536)
++..++.+.+.|.++++|+++|++.-+..... ....+.. ...+.-...+++++++.-....... ...+..+.+++
T Consensus 130 t~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L 209 (346)
T PF02350_consen 130 TEEARERLLQEGEPPERIFVVGNPGIDALLQNKEEIEEKYKNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKAL 209 (346)
T ss_dssp SHHHHHHHHHTT--GGGEEE---HHHHHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCeEEEEChHHHHHHHHhHHHHhhhhhhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHH
Confidence 99999999999999999999999865543211 0001111 1111002456777777654443321 22333333444
Q ss_pred hhcccCCCCcEEEEEecCCHHH----HHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEE
Q 036427 377 YDENLGEPIGQVLVICGRNKKL----ANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKAGPGTIAEAMIRGLPII 450 (536)
Q Consensus 377 ~~~~~~~~~~~~lvi~G~~~~l----~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI 450 (536)
.+ .+++.+++.....+.. .+.+++. .++.+.... .++-.+|+.|+++|+-|| +..-||.++|+|+|
T Consensus 210 ~~----~~~~~vi~~~hn~p~~~~~i~~~l~~~---~~v~~~~~l~~~~~l~ll~~a~~vvgdSs-GI~eEa~~lg~P~v 281 (346)
T PF02350_consen 210 AE----RQNVPVIFPLHNNPRGSDIIIEKLKKY---DNVRLIEPLGYEEYLSLLKNADLVVGDSS-GIQEEAPSLGKPVV 281 (346)
T ss_dssp HH----HTTEEEEEE--S-HHHHHHHHHHHTT----TTEEEE----HHHHHHHHHHESEEEESSH-HHHHHGGGGT--EE
T ss_pred Hh----cCCCcEEEEecCCchHHHHHHHHhccc---CCEEEECCCCHHHHHHHHhcceEEEEcCc-cHHHHHHHhCCeEE
Confidence 32 2457777777655533 3334433 389888776 488999999999999998 44449999999999
Q ss_pred EeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 036427 451 LNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLH 520 (536)
Q Consensus 451 ~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~ 520 (536)
.+...+.++. ....|.+.++. +++++.++|.++++ +++.+.++.....-+...++.++|++.|+
T Consensus 282 ~iR~~geRqe-----~r~~~~nvlv~~~~~~I~~ai~~~l~-~~~~~~~~~~~~npYgdG~as~rI~~~Lk 346 (346)
T PF02350_consen 282 NIRDSGERQE-----GRERGSNVLVGTDPEAIIQAIEKALS-DKDFYRKLKNRPNPYGDGNASERIVEILK 346 (346)
T ss_dssp ECSSS-S-HH-----HHHTTSEEEETSSHHHHHHHHHHHHH--HHHHHHHHCS--TT-SS-HHHHHHHHHH
T ss_pred EecCCCCCHH-----HHhhcceEEeCCCHHHHHHHHHHHHh-ChHHHHhhccCCCCCCCCcHHHHHHHhhC
Confidence 9865444443 66677777675 89999999999998 66666665554445777788888887763
No 101
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.53 E-value=5.8e-12 Score=134.82 Aligned_cols=260 Identities=18% Similarity=0.269 Sum_probs=162.8
Q ss_pred HHHHHHHHHHHhhCCCEEEEcC-cccchHHHHHHHHcCCCCCceEEEEecC-CCCccc---ccccccCCEEEEcCHHHHH
Q 036427 233 FIAREVAKGLMKYQPDIIISVH-PLMQHVPLRILRAKGLLKKIVFTTVITD-LSTCHP---TWFHKLVTRCYCPTADVAK 307 (536)
Q Consensus 233 ~~~~~l~~~l~~~kPDvVi~~~-~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~~~~---~~~~~~~d~vi~~S~~~~~ 307 (536)
...+++.+.+++.+||++++.+ |-.+.--+..+|+.|. ++|+++++.- .+...+ +.+.+.+|.++|..+...+
T Consensus 297 ~~~~~l~~~i~~~kPD~vIlID~PgFNlrLAK~lkk~Gi--~ipviyYVsPqVWAWR~~Rikki~k~vD~ll~IfPFE~~ 374 (608)
T PRK01021 297 YRYRKLYKTILKTNPRTVICIDFPDFHFLLIKKLRKRGY--KGKIVHYVCPSIWAWRPKRKTILEKYLDLLLLILPFEQN 374 (608)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCHHHHHHHHhcCC--CCCEEEEECccceeeCcchHHHHHHHhhhheecCccCHH
Confidence 3456888889999999999854 4443222334455552 2588877653 322222 3457889999999999999
Q ss_pred HHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcE
Q 036427 308 RAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQ 387 (536)
Q Consensus 308 ~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~ 387 (536)
.+.++|++ ++.+|+|+-+... ...++++.+++++++++.+++.++-|+.. ..+..++..+.++.+...+ .++.+
T Consensus 375 ~y~~~gv~---v~yVGHPL~d~i~-~~~~~~~~r~~lgl~~~~~iIaLLPGSR~-~EI~rllPv~l~aa~~~~l-~~~l~ 448 (608)
T PRK01021 375 LFKDSPLR---TVYLGHPLVETIS-SFSPNLSWKEQLHLPSDKPIVAAFPGSRR-GDILRNLTIQVQAFLASSL-ASTHQ 448 (608)
T ss_pred HHHhcCCC---eEEECCcHHhhcc-cCCCHHHHHHHcCCCCCCCEEEEECCCCH-HHHHHHHHHHHHHHHHHHh-ccCeE
Confidence 99998876 7899999877633 23345678899999888888888888754 3444555555544430011 13456
Q ss_pred EEEEecCCH--H-HHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChh
Q 036427 388 VLVICGRNK--K-LANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVP 464 (536)
Q Consensus 388 ~lvi~G~~~--~-l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~ 464 (536)
+++...... + +.+.+++.+. .++.++.- ++-.++|++||+.+..|| .+.+|++.+|+|.|+.-....-...-++
T Consensus 449 fvvp~a~~~~~~~i~~~~~~~~~-~~~~ii~~-~~~~~~m~aaD~aLaaSG-TaTLEaAL~g~PmVV~YK~s~Lty~Iak 525 (608)
T PRK01021 449 LLVSSANPKYDHLILEVLQQEGC-LHSHIVPS-QFRYELMRECDCALAKCG-TIVLETALNQTPTIVTCQLRPFDTFLAK 525 (608)
T ss_pred EEEecCchhhHHHHHHHHhhcCC-CCeEEecC-cchHHHHHhcCeeeecCC-HHHHHHHHhCCCEEEEEecCHHHHHHHH
Confidence 655433322 1 2222322110 13343321 123699999999999998 6678999999999997765432222333
Q ss_pred hHhhC------------Ccee---ec---C--CHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Q 036427 465 YVVEN------------GCGK---FS---K--SPKEIANMVSQWFGPKIDELKAMSQNALK 505 (536)
Q Consensus 465 ~lv~~------------g~g~---~~---~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~ 505 (536)
.+++- |..+ ++ + +++.+++++ +++. |++.++++.+.-.+
T Consensus 526 ~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~-d~~~r~~~~~~l~~ 584 (608)
T PRK01021 526 YIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILK-TSQSKEKQKDACRD 584 (608)
T ss_pred HHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhc-CHHHHHHHHHHHHH
Confidence 34431 1111 23 1 699999996 8888 88777777765544
No 102
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=99.52 E-value=1.7e-11 Score=124.50 Aligned_cols=328 Identities=18% Similarity=0.135 Sum_probs=192.6
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccc-cceeecCCCccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPL-WKMTYYGTAPRVIH 223 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l-~~~~~~~~~~~~~~ 223 (536)
|||||-.... .|..-...+++.|.++ ||+|+++....+.. ..+.+.-.+ +...... ...
T Consensus 1 MkIwiDi~~p--~hvhfFk~~I~eL~~~---GheV~it~R~~~~~-----------~~LL~~yg~~y~~iG~~-g~~--- 60 (335)
T PF04007_consen 1 MKIWIDITHP--AHVHFFKNIIRELEKR---GHEVLITARDKDET-----------EELLDLYGIDYIVIGKH-GDS--- 60 (335)
T ss_pred CeEEEECCCc--hHHHHHHHHHHHHHhC---CCEEEEEEeccchH-----------HHHHHHcCCCeEEEcCC-CCC---
Confidence 8999998887 6999999999999999 89999886543210 001111100 0000000 001
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC-CCCcccccccccCCEEEEcC
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD-LSTCHPTWFHKLVTRCYCPT 302 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~~~~~~~~~~~d~vi~~S 302 (536)
...+.........++.+++++++||++++.+... ...++...| +|.+.+..+ ......+...+++|.++++.
T Consensus 61 ~~~Kl~~~~~R~~~l~~~~~~~~pDv~is~~s~~---a~~va~~lg----iP~I~f~D~e~a~~~~~Lt~Pla~~i~~P~ 133 (335)
T PF04007_consen 61 LYGKLLESIERQYKLLKLIKKFKPDVAISFGSPE---AARVAFGLG----IPSIVFNDTEHAIAQNRLTLPLADVIITPE 133 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEecCcHH---HHHHHHHhC----CCeEEEecCchhhccceeehhcCCeeECCc
Confidence 1111122334456888889999999999877543 233455455 888766543 22223355678899999887
Q ss_pred HHHHHHHHHhCCCCCCEEEeCCCCCCCCCC-CCCchHHHHHHcCCCCCCCEEEEecCCCCC---CcHHHHHHHHHHHhhh
Q 036427 303 ADVAKRAMKAGLQASQIKVYGLPVRPSFVK-PVRPKVELRRELGMDEDLPAVLLMGGGEGM---GPIEATARALGNALYD 378 (536)
Q Consensus 303 ~~~~~~l~~~g~~~~ki~vignpv~~~~~~-~~~~~~~~r~~lgi~~~~~~il~~gg~~g~---k~~~~~l~al~~~l~~ 378 (536)
-.-...+.++|.. .++. .++++.+..+- +-.+.+++.+++|+++ .++|++=.-.+.. ..-..++..+.+.+.+
T Consensus 134 ~~~~~~~~~~G~~-~~i~-~y~G~~E~ayl~~F~Pd~~vl~~lg~~~-~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~ 210 (335)
T PF04007_consen 134 AIPKEFLKRFGAK-NQIR-TYNGYKELAYLHPFKPDPEVLKELGLDD-EPYIVVRPEAWKASYDNGKKSILPEIIEELEK 210 (335)
T ss_pred ccCHHHHHhcCCc-CCEE-EECCeeeEEeecCCCCChhHHHHcCCCC-CCEEEEEeccccCeeecCccchHHHHHHHHHh
Confidence 6666666677765 4554 24455443221 2244678889999875 4666542222111 1112334555555542
Q ss_pred cccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCcc
Q 036427 379 ENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQ 458 (536)
Q Consensus 379 ~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~ 458 (536)
....++++ ...++..+..++. ++.+....=+..+++..||++|..+| ....||+.+|+|+|.+-.+.
T Consensus 211 -----~~~~vV~i-pr~~~~~~~~~~~----~~~i~~~~vd~~~Ll~~a~l~Ig~gg-TMa~EAA~LGtPaIs~~~g~-- 277 (335)
T PF04007_consen 211 -----YGRNVVII-PRYEDQRELFEKY----GVIIPPEPVDGLDLLYYADLVIGGGG-TMAREAALLGTPAISCFPGK-- 277 (335)
T ss_pred -----hCceEEEe-cCCcchhhHHhcc----CccccCCCCCHHHHHHhcCEEEeCCc-HHHHHHHHhCCCEEEecCCc--
Confidence 22223333 3333233333432 24444433355689999999998766 55689999999999874321
Q ss_pred ccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 036427 459 EAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELV 523 (536)
Q Consensus 459 e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~ 523 (536)
....-+++++.|.-....|++++.+.+...+. .. .+.+....++..+.|++.|++++
T Consensus 278 ~~~vd~~L~~~Gll~~~~~~~ei~~~v~~~~~-~~-------~~~~~~~~~d~~~~i~~~i~~~~ 334 (335)
T PF04007_consen 278 LLAVDKYLIEKGLLYHSTDPDEIVEYVRKNLG-KR-------KKIREKKSEDPTDLIIEEIEEYI 334 (335)
T ss_pred chhHHHHHHHCCCeEecCCHHHHHHHHHHhhh-cc-------cchhhhhccCHHHHHHHHHHHhh
Confidence 11234568888875566799999887766554 21 12222223677788888888765
No 103
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.52 E-value=2.2e-13 Score=130.38 Aligned_cols=303 Identities=16% Similarity=0.128 Sum_probs=168.0
Q ss_pred ceEEEEeCC---CCchHHHHHHHHHHHHHhccCCceEEEEee-cccccCCCCCCcchhHHHHHHhhccccceeecCCCcc
Q 036427 145 KKVLILMSD---TGGGHRASAEAIKAAFHEKFGNEYQVFVTD-LWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPR 220 (536)
Q Consensus 145 mKIL~~~~~---~GgGh~~~~l~La~~L~~~~g~g~eV~v~~-~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~ 220 (536)
|||+|.|.+ .|+||++|.+.||++|.+. |.+++... ...+. +. |. .++.. ....
T Consensus 1 M~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~---~~~~~fl~k~~~e~-------~~--~~-~~~~f---~~~~------ 58 (318)
T COG3980 1 MKVLIRCDGGLEIGMGHVMRTLTLARELEKR---GFACLFLTKQDIEA-------II--HK-VYEGF---KVLE------ 58 (318)
T ss_pred CcEEEEecCCcccCcchhhhHHHHHHHHHhc---CceEEEecccchhh-------hh--hh-hhhhc---ccee------
Confidence 799999854 7899999999999999998 66664432 22111 00 00 11110 0000
Q ss_pred cccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHH-HHHHHcCCCCCceEEEEecCCCCcccccccccCCEEE
Q 036427 221 VIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPL-RILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCY 299 (536)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~-~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi 299 (536)
. +....|++.++|++|.++.-...--. .+....+ .+.+. ..|.. .+ ...|..+
T Consensus 59 -~--------------~~~n~ik~~k~d~lI~Dsygl~~dd~k~ik~e~~----~k~l~-fDd~~---~~---~~~d~d~ 112 (318)
T COG3980 59 -G--------------RGNNLIKEEKFDLLIFDSYGLNADDFKLIKEEAG----SKILI-FDDEN---AK---SFKDNDL 112 (318)
T ss_pred -e--------------ecccccccccCCEEEEeccCCCHHHHHHHHHHhC----CcEEE-ecCCC---cc---chhhhHh
Confidence 0 11125888999999998755432111 2222333 33322 22221 11 1123323
Q ss_pred EcCHHHHHHHHHhCCCCCCEE-EeCC---CCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHH
Q 036427 300 CPTADVAKRAMKAGLQASQIK-VYGL---PVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNA 375 (536)
Q Consensus 300 ~~S~~~~~~l~~~g~~~~ki~-vign---pv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~ 375 (536)
++..... ....++.-+.+.. ..|. +++++|+.. +++.+++ +.+.+++.+||+.. +++ ...++..
T Consensus 113 ivN~~~~-a~~~y~~v~~k~~~~lGp~y~~lr~eF~~~---r~~~~~r----~~r~ilI~lGGsDp-k~l---t~kvl~~ 180 (318)
T COG3980 113 IVNAILN-ANDYYGLVPNKTRYYLGPGYAPLRPEFYAL---REENTER----PKRDILITLGGSDP-KNL---TLKVLAE 180 (318)
T ss_pred hhhhhhc-chhhccccCcceEEEecCCceeccHHHHHh---HHHHhhc----chheEEEEccCCCh-hhh---HHHHHHH
Confidence 2232222 2233444444443 3333 456655432 2222211 22334555666543 332 2222223
Q ss_pred hhhcccCCCCcEEEEEecCCH-HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEecc
Q 036427 376 LYDENLGEPIGQVLVICGRNK-KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 376 l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~ 454 (536)
+. ..+..+-++.|... .+.+..+.....+++.+.-..++|+++|..||+.|+.+| .|+.||+..|+|.++.+.
T Consensus 181 L~-----~~~~nl~iV~gs~~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~aI~AaG-stlyEa~~lgvP~l~l~~ 254 (318)
T COG3980 181 LE-----QKNVNLHIVVGSSNPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADLAISAAG-STLYEALLLGVPSLVLPL 254 (318)
T ss_pred hh-----ccCeeEEEEecCCCcchhHHHHHHhhCCCeeeEecchhHHHHHHhcchheeccc-hHHHHHHHhcCCceEEee
Confidence 32 12244445556443 344444434456788888888899999999999998654 899999999999888876
Q ss_pred CCccccCChhhHhhCCceeec---CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHH
Q 036427 455 IAGQEAGNVPYVVENGCGKFS---KSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRI 515 (536)
Q Consensus 455 ~~~~e~~na~~lv~~g~g~~~---~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i 515 (536)
..+|.. .+.++...|...-. -.+......+..+.+ |+..|+.+....+......+..+|
T Consensus 255 a~NQ~~-~a~~f~~lg~~~~l~~~l~~~~~~~~~~~i~~-d~~~rk~l~~~~~~i~dg~g~~rI 316 (318)
T COG3980 255 AENQIA-TAKEFEALGIIKQLGYHLKDLAKDYEILQIQK-DYARRKNLSFGSKLIGDGRGFLRI 316 (318)
T ss_pred eccHHH-HHHHHHhcCchhhccCCCchHHHHHHHHHhhh-CHHHhhhhhhccceeeccccceec
Confidence 665542 55556665543332 245566677888888 999998888776666555555444
No 104
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.50 E-value=2.6e-12 Score=122.76 Aligned_cols=215 Identities=16% Similarity=0.133 Sum_probs=130.4
Q ss_pred EEEEeCCC---CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccccc
Q 036427 147 VLILMSDT---GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 147 IL~~~~~~---GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 223 (536)
|++++... +||+.+++..|++.|.+. |++|.+...
T Consensus 1 i~~i~~~~~~~~~G~~~~~~~l~~~L~~~---g~~v~v~~~--------------------------------------- 38 (229)
T cd01635 1 ILLVSTPLLPGGGGVELVLLDLAKALARR---GHEVEVVAL--------------------------------------- 38 (229)
T ss_pred CeeeccccCCCCCCchhHHHHHHHHHHHc---CCeEEEEEe---------------------------------------
Confidence 34555443 689999999999999998 778877650
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHH-HHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEcC
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPL-RILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPT 302 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~-~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S 302 (536)
....+.+.+++.+||+||++.+....... ...+.. ++|++...++...... .....
T Consensus 39 ----------~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~----~~~~i~~~h~~~~~~~-~~~~~-------- 95 (229)
T cd01635 39 ----------LLLLLLRILRGFKPDVVHAHGYYPAPLALLLAARLL----GIPLVLTVHGVNRSLL-EGVPL-------- 95 (229)
T ss_pred ----------chHHHHHHHhhcCCCEEEEcCCCcHHHHHHHHHhhC----CCCEEEEEcCccHhhc-ccCcH--------
Confidence 00133345667899999999876544322 222222 3787777776531111 00000
Q ss_pred HHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccC
Q 036427 303 ADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLG 382 (536)
Q Consensus 303 ~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~ 382 (536)
...... ... ....++|+....++...+++++..... .
T Consensus 96 -~~~~~~----~~~----------------------------------~~~~~~g~~~~~k~~~~~~~a~~~l~~----~ 132 (229)
T cd01635 96 -SLLALS----IGL----------------------------------ADKVFVGRLAPEKGLDDLIEAFALLKE----R 132 (229)
T ss_pred -HHHHHH----Hhh----------------------------------cceEEEEeecccCCHHHHHHHHHHHHH----h
Confidence 000000 000 001156666666676666666655432 2
Q ss_pred CCCcEEEEEecCCHH-HHHH-HHcCCCCCCEEEecCh---hhHHHHHhhcCeEEECCC----hHHHHHHHHhCCcEEEec
Q 036427 383 EPIGQVLVICGRNKK-LANK-LLSTDWKIPVQVKGFV---SKMEEAMGACDCIITKAG----PGTIAEAMIRGLPIILND 453 (536)
Q Consensus 383 ~~~~~~lvi~G~~~~-l~~~-l~~~~~~~~V~~~G~v---~~l~~ll~~aDv~V~~sG----~~tllEAma~GlPVI~~~ 453 (536)
.++++++++++..++ ..+. ..+.....+|.++|++ +++..+++.||++++++. |++++|||++|+|+|+++
T Consensus 133 ~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~ 212 (229)
T cd01635 133 GPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATD 212 (229)
T ss_pred CCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcC
Confidence 356776555433332 2222 4455667899999995 466677777999999983 899999999999999999
Q ss_pred cCCccccCChhhHhhCCceee
Q 036427 454 FIAGQEAGNVPYVVENGCGKF 474 (536)
Q Consensus 454 ~~~~~e~~na~~lv~~g~g~~ 474 (536)
.++..+. +.+.+.|.+
T Consensus 213 ~~~~~e~-----i~~~~~g~~ 228 (229)
T cd01635 213 VGGPPEI-----VEDGLTGLL 228 (229)
T ss_pred CCCcceE-----EECCCceEE
Confidence 8765553 444455543
No 105
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=99.44 E-value=6.7e-12 Score=128.52 Aligned_cols=252 Identities=11% Similarity=0.061 Sum_probs=149.4
Q ss_pred HHHHHHHHhhCCCEEEEcC-cccchHHHHHHHHcCCCCCceEEEEecC-CCCccc---ccccccCCEEEEcCHHHHHHHH
Q 036427 236 REVAKGLMKYQPDIIISVH-PLMQHVPLRILRAKGLLKKIVFTTVITD-LSTCHP---TWFHKLVTRCYCPTADVAKRAM 310 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~-~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~~~~---~~~~~~~d~vi~~S~~~~~~l~ 310 (536)
+++.+.+ .+||+++..+ |-++.--...+++.+ .++|+++++.- .+.+.+ +.+.+.+|.+++..+...+.+
T Consensus 68 ~~~~~~~--~~pd~~i~iD~p~Fnl~lak~~k~~~--~~i~viyyi~PqvWAWr~~R~~~i~k~~d~vl~ifPFE~~~y- 142 (347)
T PRK14089 68 KEMVELA--KQADKVLLMDSSSFNIPLAKKIKKAY--PKKEIIYYILPQVWAWKKGRAKILEKYCDFLASILPFEVQFY- 142 (347)
T ss_pred HHHHHHh--cCCCEEEEeCCCCCCHHHHHHHHhcC--CCCCEEEEECccceeeCcchHHHHHHHHhhhhccCCCCHHHh-
Confidence 3444443 6899999855 433321233344442 24898877653 332222 345778899998777655554
Q ss_pred HhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEE
Q 036427 311 KAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLV 390 (536)
Q Consensus 311 ~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lv 390 (536)
|+ +..++|+|+.+..... +.. ++ +.++|++++|+.+.+- ..++..+.++..... .... ..+
T Consensus 143 --g~---~~~~VGhPl~d~~~~~-------~~~--~~-~~~~I~llPGSR~~Ei-~~llP~~~~aa~~L~--~~~~-~~~ 203 (347)
T PRK14089 143 --QS---KATYVGHPLLDEIKEF-------KKD--LD-KEGTIAFMPGSRKSEI-KRLMPIFKELAKKLE--GKEK-ILV 203 (347)
T ss_pred --CC---CCEEECCcHHHhhhhh-------hhh--cC-CCCEEEEECCCCHHHH-HHHHHHHHHHHHHHh--hcCc-EEE
Confidence 44 4679999987653211 111 22 2378889999877433 255553333332211 1223 344
Q ss_pred EecCCH--HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhh
Q 036427 391 ICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE 468 (536)
Q Consensus 391 i~G~~~--~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~ 468 (536)
+.+... .+.+.+.+. ..+.+. ++..++|+.||++++.||..|+ |++.+|+|.|+.-.....+..+++.++.
T Consensus 204 i~~a~~~~~i~~~~~~~---~~~~~~---~~~~~~m~~aDlal~~SGT~TL-E~al~g~P~Vv~Yk~~~lty~iak~lv~ 276 (347)
T PRK14089 204 VPSFFKGKDLKEIYGDI---SEFEIS---YDTHKALLEAEFAFICSGTATL-EAALIGTPFVLAYKAKAIDYFIAKMFVK 276 (347)
T ss_pred EeCCCcHHHHHHHHhcC---CCcEEe---ccHHHHHHhhhHHHhcCcHHHH-HHHHhCCCEEEEEeCCHHHHHHHHHHHc
Confidence 445442 222323221 234444 3668899999999999997776 9999999999966555555556776662
Q ss_pred C---Cc-----------eee---cC---CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 469 N---GC-----------GKF---SK---SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 469 ~---g~-----------g~~---~~---d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
- |. .++ +. +++.|++.+.+. +.+...++....++...+.+.+++++.+.+
T Consensus 277 ~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i~~~---~~~~~~~~~~~l~~~l~~~a~~~~A~~i~~ 346 (347)
T PRK14089 277 LKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKAYKEM---DREKFFKKSKELREYLKHGSAKNVAKILKE 346 (347)
T ss_pred CCeeehHHHhcCCCcccccCchhhcccCCHHHHHHHHHHH---HHHHHHHHHHHHHHHhcCCHHHHHHHHHhc
Confidence 1 11 111 11 688999888772 344455555556665566888888887765
No 106
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.42 E-value=1.4e-14 Score=133.83 Aligned_cols=148 Identities=28% Similarity=0.448 Sum_probs=104.8
Q ss_pred EEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcC-CCCCCEEEecChhhHHHHHhhcCeEE
Q 036427 353 VLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGFVSKMEEAMGACDCII 431 (536)
Q Consensus 353 il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~-~~~~~V~~~G~v~~l~~ll~~aDv~V 431 (536)
|+++||+.+...+.+.+..+.+.+... ..+.++++++|... ..+...+. ....+|.+.+|.++|.++|+.||++|
T Consensus 2 ilv~gGs~g~~~l~~~v~~~~~~~~~~---~~~~~viv~~G~~~-~~~~~~~~~~~~~~v~~~~~~~~m~~~m~~aDlvI 77 (167)
T PF04101_consen 2 ILVTGGSQGARDLNRLVLKILELLAEK---HKNIQVIVQTGKNN-YEELKIKVENFNPNVKVFGFVDNMAELMAAADLVI 77 (167)
T ss_dssp EEEEETTTSHHHHHCCCCCHHHHHHHH---HHHCCCCCCCTTCE-CHHHCCCHCCTTCCCEEECSSSSHHHHHHHHSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHhhc---CCCcEEEEEECCCc-HHHHHHHHhccCCcEEEEechhhHHHHHHHcCEEE
Confidence 678999888665555444444433210 02356788889874 22221111 22268999999999999999999999
Q ss_pred ECCChHHHHHHHHhCCcEEEeccCC---ccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q 036427 432 TKAGPGTIAEAMIRGLPIILNDFIA---GQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNAL 504 (536)
Q Consensus 432 ~~sG~~tllEAma~GlPVI~~~~~~---~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~ 504 (536)
+++|++|+.|++++|+|.|++|... +++..|+..+.+.|.+..+. +++.|.+.|..+++ ++..+..|..++.
T Consensus 78 s~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~-~~~~~~~~~~~~~ 156 (167)
T PF04101_consen 78 SHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESELNPEELAEAIEELLS-DPEKLKEMAKAAA 156 (167)
T ss_dssp ECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCC-CHH-SHHHCCCHH
T ss_pred eCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHc-CcHHHHHHHHHHH
Confidence 9999999999999999999999876 35666999999999988764 47789999999999 8887777766553
Q ss_pred H
Q 036427 505 K 505 (536)
Q Consensus 505 ~ 505 (536)
.
T Consensus 157 ~ 157 (167)
T PF04101_consen 157 A 157 (167)
T ss_dssp H
T ss_pred H
Confidence 3
No 107
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.38 E-value=5.6e-11 Score=134.56 Aligned_cols=265 Identities=12% Similarity=0.162 Sum_probs=171.2
Q ss_pred HhhCC-CEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC-CCC-----ccc--ccc---cccCCEEEEcCHHHHHHHH
Q 036427 243 MKYQP-DIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD-LST-----CHP--TWF---HKLVTRCYCPTADVAKRAM 310 (536)
Q Consensus 243 ~~~kP-DvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~-----~~~--~~~---~~~~d~vi~~S~~~~~~l~ 310 (536)
+..+| |+|.+|..-+..+|..+-+ .+ ++.++..+.|- +.. +.+ ..+ .-.+|.|-..+....+.+.
T Consensus 143 ~~~~~~d~vWvhDYhL~llp~~lR~-~~--~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl 219 (797)
T PLN03063 143 ENYEEGDVVWCHDYHLMFLPQYLKE-YN--NKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFL 219 (797)
T ss_pred HhcCCCCEEEEecchhhhHHHHHHH-hC--CCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHH
Confidence 33445 6888887766666655433 33 23565555442 221 111 111 2357888888888777765
Q ss_pred H-----hCCC-----------CCCEEEeCCCCCCCCCCCCCc----hH---HHHHHcCCCCCCCEEEEecCCCCCCcHHH
Q 036427 311 K-----AGLQ-----------ASQIKVYGLPVRPSFVKPVRP----KV---ELRRELGMDEDLPAVLLMGGGEGMGPIEA 367 (536)
Q Consensus 311 ~-----~g~~-----------~~ki~vignpv~~~~~~~~~~----~~---~~r~~lgi~~~~~~il~~gg~~g~k~~~~ 367 (536)
. .+.. ..++.++++++++..+.+... ++ .+++.+ .++++|+.+|+....|++..
T Consensus 220 ~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~lIl~VgRLd~~KGi~~ 296 (797)
T PLN03063 220 SACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFF---AGRKVILGVDRLDMIKGIPQ 296 (797)
T ss_pred HHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhc---CCCeEEEEecccccccCHHH
Confidence 4 1322 135779999999876543211 11 233333 35678888998888899988
Q ss_pred HHHHHHHHhhhcccCCCCcE----EEEEec----CCH---HHHHHHHcCC--CC--------CCEEEec-Ch--hhHHHH
Q 036427 368 TARALGNALYDENLGEPIGQ----VLVICG----RNK---KLANKLLSTD--WK--------IPVQVKG-FV--SKMEEA 423 (536)
Q Consensus 368 ~l~al~~~l~~~~~~~~~~~----~lvi~G----~~~---~l~~~l~~~~--~~--------~~V~~~G-~v--~~l~~l 423 (536)
.++++...+. .+|+++ ++.+++ .++ +++++++++. +. ..|++++ .+ +++.++
T Consensus 297 lL~Afe~lL~----~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~al 372 (797)
T PLN03063 297 KYLAFEKFLE----ENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCAL 372 (797)
T ss_pred HHHHHHHHHH----hCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHH
Confidence 8888876654 245542 233333 222 2333443331 11 1233333 33 589999
Q ss_pred HhhcCeEEECC---C-hHHHHHHHHhCCc----EEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCH
Q 036427 424 MGACDCIITKA---G-PGTIAEAMIRGLP----IILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKI 493 (536)
Q Consensus 424 l~~aDv~V~~s---G-~~tllEAma~GlP----VI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~ 493 (536)
|+.||++|++| | +++++|||+||+| +|++...+..+ .. ...+.+++ |+++++++|.+++++++
T Consensus 373 y~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~------~l-~~~allVnP~D~~~lA~AI~~aL~m~~ 445 (797)
T PLN03063 373 YAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQ------SL-GAGALLVNPWNITEVSSAIKEALNMSD 445 (797)
T ss_pred HHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchh------hh-cCCeEEECCCCHHHHHHHHHHHHhCCH
Confidence 99999999998 6 8999999999999 88877644333 22 22456664 99999999999999888
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 494 DELKAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 494 ~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
++++...++.++++..+.+.+.++.+++.++
T Consensus 446 ~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~ 476 (797)
T PLN03063 446 EERETRHRHNFQYVKTHSAQKWADDFMSELN 476 (797)
T ss_pred HHHHHHHHHHHHhhhhCCHHHHHHHHHHHHH
Confidence 8999999999999999999998888766543
No 108
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.36 E-value=4.3e-10 Score=110.39 Aligned_cols=366 Identities=15% Similarity=0.116 Sum_probs=212.5
Q ss_pred CCCCceEEEEe--CCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCC-CcchhHHHHHHhhccccc--e-ee
Q 036427 141 NDQPKKVLILM--SDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPF-NQLPRSYNFLVKHGPLWK--M-TY 214 (536)
Q Consensus 141 ~~~~mKIL~~~--~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~-~~~~~~y~~~~~~~~l~~--~-~~ 214 (536)
....+.+.|.. .+.|||.++......+.+.+++++. ..++.+..-+..+... ......+........+.. . ..
T Consensus 40 ~k~~ktvgfFHPYCNAGGGGErVLW~Avr~~q~k~~n~-~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R 118 (465)
T KOG1387|consen 40 EKNVKTVGFFHPYCNAGGGGERVLWKAVRITQRKFPNN-VIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIFFIYLKLR 118 (465)
T ss_pred hhhceEEEEecccccCCCCcceehhHHHHHHHHhCCCc-eEEEEeCCCCCCHHHHHHHHHHhcCceecccceEEEEEEee
Confidence 34446788876 4678999999999999999998853 4444443222111000 000000000001111100 0 00
Q ss_pred cC-CCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec------CCCC--
Q 036427 215 YG-TAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT------DLST-- 285 (536)
Q Consensus 215 ~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~------d~~~-- 285 (536)
+. ......+-....+....+...+ +.+-++.||+.|-+..+....|++. +.++ +|++++.| |.-.
T Consensus 119 ~lVea~~~~hfTllgQaigsmIl~~-Eai~r~~Pdi~IDtMGY~fs~p~~r-~l~~----~~V~aYvHYP~iS~DML~~l 192 (465)
T KOG1387|consen 119 YLVEASTWKHFTLLGQAIGSMILAF-EAIIRFPPDIFIDTMGYPFSYPIFR-RLRR----IPVVAYVHYPTISTDMLKKL 192 (465)
T ss_pred eeeecccccceehHHHHHHHHHHHH-HHHHhCCchheEecCCCcchhHHHH-HHcc----CceEEEEecccccHHHHHHH
Confidence 11 1111222222222222222333 3455689999998776655555532 2333 88876655 1100
Q ss_pred --------------cc-------cccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHc
Q 036427 286 --------------CH-------PTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRREL 344 (536)
Q Consensus 286 --------------~~-------~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~l 344 (536)
.+ ..|.-..+|.+++.|..+.+..... +...++.++++|.+.+ ++.+..
T Consensus 193 ~qrq~s~~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qi-W~~~~~~iVyPPC~~e---------~lks~~ 262 (465)
T KOG1387|consen 193 FQRQKSGILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQI-WQSNTCSIVYPPCSTE---------DLKSKF 262 (465)
T ss_pred HhhhhcchhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHH-hhccceeEEcCCCCHH---------HHHHHh
Confidence 00 1223457788999999888776552 2336678888887654 333333
Q ss_pred CC-CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhccc--CCCCcEEEEEecCC-H-------HHHHHHHcCCCCCCEEE
Q 036427 345 GM-DEDLPAVLLMGGGEGMGPIEATARALGNALYDENL--GEPIGQVLVICGRN-K-------KLANKLLSTDWKIPVQV 413 (536)
Q Consensus 345 gi-~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~--~~~~~~~lvi~G~~-~-------~l~~~l~~~~~~~~V~~ 413 (536)
+- .++.+.++.+|.....|+.. .++..+--+..+.+ .-+++.++++++.. + .+++...++.+..+|+|
T Consensus 263 ~te~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F 341 (465)
T KOG1387|consen 263 GTEGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQF 341 (465)
T ss_pred cccCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEE
Confidence 33 24456777887777766644 33333222221111 11445655554332 2 13334445678888998
Q ss_pred ecCh--hhHHHHHhhcCeEEECC----ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHH
Q 036427 414 KGFV--SKMEEAMGACDCIITKA----GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQ 487 (536)
Q Consensus 414 ~G~v--~~l~~ll~~aDv~V~~s----G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ 487 (536)
.-.+ +++..+|..|.+.|..= .|..+.|+||+|+-.|+-+.++..-+ ....-.....|++..+.++.++++.+
T Consensus 342 ~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lD-IV~~~~G~~tGFla~t~~EYaE~iLk 420 (465)
T KOG1387|consen 342 EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLD-IVTPWDGETTGFLAPTDEEYAEAILK 420 (465)
T ss_pred EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCcee-eeeccCCccceeecCChHHHHHHHHH
Confidence 7665 58999999999988753 47899999999999998887653222 11111122346677899999999999
Q ss_pred HhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 488 WFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 488 ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
++.++++.|..|+++||....+++-.+..+.+.+.++.
T Consensus 421 Iv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 421 IVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 99988888999999999988888888877777766554
No 109
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.30 E-value=6.1e-11 Score=124.01 Aligned_cols=225 Identities=15% Similarity=0.047 Sum_probs=137.6
Q ss_pred ccCCEEEEcCHHHHHHHHHh--CCCCCCEEEeCCCCCCCCCCCC------CchHHHHHHcCCCCCCCEEEEecCCCCCCc
Q 036427 293 KLVTRCYCPTADVAKRAMKA--GLQASQIKVYGLPVRPSFVKPV------RPKVELRRELGMDEDLPAVLLMGGGEGMGP 364 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~~--g~~~~ki~vignpv~~~~~~~~------~~~~~~r~~lgi~~~~~~il~~gg~~g~k~ 364 (536)
...+.+++.+...+..+.+. .+...++.+++..++.+.+.+. ..+...|.+.+......++.-+-+....++
T Consensus 208 ~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd 287 (495)
T KOG0853|consen 208 GLAWKILVNSYFTKRQFKATFVSLSNSDITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFEPGKD 287 (495)
T ss_pred hccceEecchhhhhhhhhhhhhhcCCCCcceeeccccchhccccccccchhcccccceeeeecccceEeeeeeecCCCCC
Confidence 45678899999988887764 3344557788888876655431 111222233344332333333333333344
Q ss_pred HHHHHHHHHHHhhhcc-cCCCCcEEEEEecCC-------H------HHHHHHHcCCC-CCCEEEecChhhHHHHHhhcCe
Q 036427 365 IEATARALGNALYDEN-LGEPIGQVLVICGRN-------K------KLANKLLSTDW-KIPVQVKGFVSKMEEAMGACDC 429 (536)
Q Consensus 365 ~~~~l~al~~~l~~~~-~~~~~~~~lvi~G~~-------~------~l~~~l~~~~~-~~~V~~~G~v~~l~~ll~~aDv 429 (536)
..-.+.++........ ...+..+ ++++|+. + ++.+.++++++ ...+.|+....+...+...+|+
T Consensus 288 ~~l~l~a~~~~~~~i~~~~~~~~h-l~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~yrl~adt 366 (495)
T KOG0853|consen 288 QDLALPAFTLLHDSIPEPSISSEH-LVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKYRLAADT 366 (495)
T ss_pred ceeehhhHHhhhcccCCCCCCceE-EEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHHHHHHHhc
Confidence 3333333332221100 0112333 4445521 1 34455566666 4667776766544445555553
Q ss_pred ---EEECC---ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC-CHH---HHHHHHHHHhCCCHHHHHHH
Q 036427 430 ---IITKA---GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPK---EIANMVSQWFGPKIDELKAM 499 (536)
Q Consensus 430 ---~V~~s---G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~---~La~~I~~ll~~d~~~~~~m 499 (536)
++.|+ +|.|++|||+||+|||+++.+|.-|. +++.-.|++++ +.+ .+++++.++.. ||+++.+|
T Consensus 367 ~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~Ei-----V~~~~tG~l~dp~~e~~~~~a~~~~kl~~-~p~l~~~~ 440 (495)
T KOG0853|consen 367 KGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEI-----VVHGVTGLLIDPGQEAVAELADALLKLRR-DPELWARM 440 (495)
T ss_pred ceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEE-----EEcCCcceeeCCchHHHHHHHHHHHHHhc-CHHHHHHH
Confidence 44455 48999999999999999998775553 44444566664 445 59999999999 99999999
Q ss_pred HHHHHHhcCC-chHHHHHHHHHHHHh
Q 036427 500 SQNALKLARP-DAVFRIVQDLHELVR 524 (536)
Q Consensus 500 ~~~a~~~a~~-~~~~~i~~~i~~l~~ 524 (536)
++++++...+ +++....+.|.+.+.
T Consensus 441 ~~~G~~rV~e~fs~~~~~~ri~~~~~ 466 (495)
T KOG0853|consen 441 GKNGLKRVKEMFSWQHYSERIASVLG 466 (495)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhH
Confidence 9999998877 788777777777665
No 110
>PLN02670 transferase, transferring glycosyl groups
Probab=99.27 E-value=7.1e-09 Score=110.63 Aligned_cols=180 Identities=14% Similarity=0.083 Sum_probs=126.0
Q ss_pred HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--------HHHHHHHcCCCCCC
Q 036427 339 ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK--------KLANKLLSTDWKIP 410 (536)
Q Consensus 339 ~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--------~l~~~l~~~~~~~~ 410 (536)
+..+.+.-.+...+|++..|+...-. .+.+.+++..+.. .+..++++..... .+.+.+.+.-....
T Consensus 267 ~~~~wLd~~~~~sVvyvsfGS~~~l~-~~q~~ela~gl~~-----s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG 340 (472)
T PLN02670 267 RIKEWLDKQRVNSVVYVALGTEASLR-REEVTELALGLEK-----SETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRG 340 (472)
T ss_pred HHHHHHhcCCCCceEEEEecccccCC-HHHHHHHHHHHHH-----CCCCEEEEEcCCcccccchhhcCChHHHHhccCCC
Confidence 45555544444568888888765322 3455666666642 2335666654311 01111111111224
Q ss_pred EEEecChhhHHHHHhhcCe--EEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--------CHHH
Q 036427 411 VQVKGFVSKMEEAMGACDC--IITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--------SPKE 480 (536)
Q Consensus 411 V~~~G~v~~l~~ll~~aDv--~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--------d~~~ 480 (536)
+.+.+|+++ .++|++.++ +|+++|.++++||+++|+|+|+.|...+|.. |+..+++.|+|..+. +.++
T Consensus 341 ~vv~~W~PQ-~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~-Na~~v~~~g~Gv~l~~~~~~~~~~~e~ 418 (472)
T PLN02670 341 MIHVGWVPQ-VKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGL-NTRLLHGKKLGLEVPRDERDGSFTSDS 418 (472)
T ss_pred eEEeCcCCH-HHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHH-HHHHHHHcCeeEEeeccccCCcCcHHH
Confidence 777899976 578877766 9999999999999999999999999988765 999998899998662 5889
Q ss_pred HHHHHHHHhCCCH---HHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhcC
Q 036427 481 IANMVSQWFGPKI---DELKAMSQNALKLARPDAVFRIVQDLHELVRQRN 527 (536)
Q Consensus 481 La~~I~~ll~~d~---~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~~~ 527 (536)
+.++|++++. ++ ++++++.+.+..+......+++++.+.+.++...
T Consensus 419 i~~av~~vm~-~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 419 VAESVRLAMV-DDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR 467 (472)
T ss_pred HHHHHHHHhc-CcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence 9999999998 65 5677777666667777888899999988887643
No 111
>PLN02448 UDP-glycosyltransferase family protein
Probab=99.26 E-value=8.3e-09 Score=110.61 Aligned_cols=141 Identities=16% Similarity=0.128 Sum_probs=98.8
Q ss_pred HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcCCCCCCEEEecCh
Q 036427 339 ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 339 ~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~~~~~~V~~~G~v 417 (536)
++...+.-.+..++|++..|+..... .+.+..++..+. ..+..++++..... ...+.. ..++.+.+|.
T Consensus 263 ~~~~wl~~~~~~~vvyvsfGs~~~~~-~~~~~~~~~~l~-----~~~~~~lw~~~~~~~~~~~~~-----~~~~~v~~w~ 331 (459)
T PLN02448 263 DYFQWLDSQPEGSVLYVSLGSFLSVS-SAQMDEIAAGLR-----DSGVRFLWVARGEASRLKEIC-----GDMGLVVPWC 331 (459)
T ss_pred HHHHHHcCCCCCceEEEeecccccCC-HHHHHHHHHHHH-----hCCCCEEEEEcCchhhHhHhc-----cCCEEEeccC
Confidence 44455544445667888777654322 345667777765 24456666543221 122211 2467888998
Q ss_pred hhHHHHHhhcCe--EEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-Cceeec---------CCHHHHHHHH
Q 036427 418 SKMEEAMGACDC--IITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFS---------KSPKEIANMV 485 (536)
Q Consensus 418 ~~l~~ll~~aDv--~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~---------~d~~~La~~I 485 (536)
++ .++|.+.++ +|+++|.++++||+++|+|+|+.|...+|.. |+..+++. |+|.-+ -+.+++.+++
T Consensus 332 pQ-~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~-na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av 409 (459)
T PLN02448 332 DQ-LKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPL-NSKLIVEDWKIGWRVKREVGEETLVGREEIAELV 409 (459)
T ss_pred CH-HHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchh-hHHHHHHHhCceEEEecccccCCcCcHHHHHHHH
Confidence 65 578888876 9999999999999999999999999888876 88888874 666544 1678999999
Q ss_pred HHHhCCCH
Q 036427 486 SQWFGPKI 493 (536)
Q Consensus 486 ~~ll~~d~ 493 (536)
++++. ++
T Consensus 410 ~~vl~-~~ 416 (459)
T PLN02448 410 KRFMD-LE 416 (459)
T ss_pred HHHhc-CC
Confidence 99998 64
No 112
>PLN03007 UDP-glucosyltransferase family protein
Probab=99.25 E-value=2.7e-08 Score=107.26 Aligned_cols=147 Identities=14% Similarity=0.096 Sum_probs=98.9
Q ss_pred HHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-------HHHHHHHcCCCCCC
Q 036427 338 VELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-------KLANKLLSTDWKIP 410 (536)
Q Consensus 338 ~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-------~l~~~l~~~~~~~~ 410 (536)
++..+.+.-.++..+|++..|+..... .+.+..++..+. ..+..++++.+... .+.+.+.+.-...+
T Consensus 273 ~~~~~wLd~~~~~svvyvsfGS~~~~~-~~~~~~~~~~l~-----~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g 346 (482)
T PLN03007 273 QECLKWLDSKKPDSVIYLSFGSVASFK-NEQLFEIAAGLE-----GSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKG 346 (482)
T ss_pred hHHHHHHhcCCCCceEEEeecCCcCCC-HHHHHHHHHHHH-----HCCCCEEEEEecCCcccchhhcCCHHHHHHhccCC
Confidence 344555544445668888777754322 234445555554 23456777766421 11122222222458
Q ss_pred EEEecChhhHHHHHhhcCe--EEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHh---hCCceee--------c--
Q 036427 411 VQVKGFVSKMEEAMGACDC--IITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVV---ENGCGKF--------S-- 475 (536)
Q Consensus 411 V~~~G~v~~l~~ll~~aDv--~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv---~~g~g~~--------~-- 475 (536)
+.+.+|+++ .++|.++++ +|+++|.++++||+++|+|+|+.|..++|.. |++.++ +.|.+.- .
T Consensus 347 ~~v~~w~PQ-~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~-na~~~~~~~~~G~~~~~~~~~~~~~~~ 424 (482)
T PLN03007 347 LIIRGWAPQ-VLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFY-NEKLVTQVLRTGVSVGAKKLVKVKGDF 424 (482)
T ss_pred EEEecCCCH-HHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhh-hHHHHHHhhcceeEeccccccccccCc
Confidence 899999976 578888876 9999999999999999999999999888876 887665 4455531 1
Q ss_pred CCHHHHHHHHHHHhCCCH
Q 036427 476 KSPKEIANMVSQWFGPKI 493 (536)
Q Consensus 476 ~d~~~La~~I~~ll~~d~ 493 (536)
-+.+++.++|++++. ++
T Consensus 425 ~~~~~l~~av~~~m~-~~ 441 (482)
T PLN03007 425 ISREKVEKAVREVIV-GE 441 (482)
T ss_pred ccHHHHHHHHHHHhc-Cc
Confidence 178999999999998 65
No 113
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.24 E-value=1.1e-08 Score=108.57 Aligned_cols=279 Identities=16% Similarity=0.075 Sum_probs=173.7
Q ss_pred hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc------------cc------------------cccccc
Q 036427 245 YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC------------HP------------------TWFHKL 294 (536)
Q Consensus 245 ~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~------------~~------------------~~~~~~ 294 (536)
.+|||||++.--..-+|..+.........+|.+..+|.+... .+ +-....
T Consensus 129 ~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ 208 (487)
T COG0297 129 WLPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYY 208 (487)
T ss_pred CCCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhhee
Confidence 469999998744433344433321012248888766643210 00 001236
Q ss_pred CCEEEEcCHHHHHHHHH--hC--C------CCCCEEEeCCCCCCCCCCCCCc------------------hHHHHHHcCC
Q 036427 295 VTRCYCPTADVAKRAMK--AG--L------QASQIKVYGLPVRPSFVKPVRP------------------KVELRRELGM 346 (536)
Q Consensus 295 ~d~vi~~S~~~~~~l~~--~g--~------~~~ki~vignpv~~~~~~~~~~------------------~~~~r~~lgi 346 (536)
+|.+.++|+..++.+.. +| . ...++.-+-|++|.+.+.+..+ +..+.+++|+
T Consensus 209 ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL 288 (487)
T COG0297 209 ADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGL 288 (487)
T ss_pred ccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCC
Confidence 78899999999888762 11 1 1245566667777666544321 2346677888
Q ss_pred CC--CCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcC--CCCCCEEE-ecChh-h
Q 036427 347 DE--DLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLST--DWKIPVQV-KGFVS-K 419 (536)
Q Consensus 347 ~~--~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~--~~~~~V~~-~G~v~-~ 419 (536)
+. +.|.+.++++...+|.+...+.++...+. ..+++ ++.|.++ .+.+.+..+ ....++.+ +++.+ -
T Consensus 289 ~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~------~~~~~-vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~l 361 (487)
T COG0297 289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLE------QGWQL-VLLGTGDPELEEALRALASRHPGRVLVVIGYDEPL 361 (487)
T ss_pred CCCCCCcEEEEeeccccccchhHHHHHHHHHHH------hCceE-EEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHH
Confidence 73 45788889888888888777777776664 23554 5567765 344433322 12224444 44444 4
Q ss_pred HHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCCh-hh--HhhCCceeecC--CHHHHHHHHHHHhC
Q 036427 420 MEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNV-PY--VVENGCGKFSK--SPKEIANMVSQWFG 490 (536)
Q Consensus 420 l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na-~~--lv~~g~g~~~~--d~~~La~~I~~ll~ 490 (536)
...+++.||++++|| + |.+-++||.+|++.|+.+.++-.++-.. .. ....|.|+.+. ++++++.+|.+.+.
T Consensus 362 a~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~ 441 (487)
T COG0297 362 AHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALV 441 (487)
T ss_pred HHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHH
Confidence 466789999999999 2 7999999999999999998775553110 00 12346677663 89999998886654
Q ss_pred C--CH-HHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhcCCcCCC
Q 036427 491 P--KI-DELKAMSQNALKLARPDAVFRIVQDLHELVRQRNFVPHY 532 (536)
Q Consensus 491 ~--d~-~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~~~~~~~~ 532 (536)
. ++ ...+.+..++.. ..++|++-++.+.++.+.-.+-|-+
T Consensus 442 ~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~lY~~~~~~~~~ 484 (487)
T COG0297 442 LYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVELYKPLLSKPFW 484 (487)
T ss_pred HhhCCHHHHHHHHHhhcc--cccCchhHHHHHHHHHHHHhccccc
Confidence 1 33 336666666555 6788999999998888775544433
No 114
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.23 E-value=3.3e-10 Score=128.16 Aligned_cols=264 Identities=12% Similarity=0.105 Sum_probs=162.7
Q ss_pred hhCC-CEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC-CCC-----ccc--cc---ccccCCEEEEcCHHHHHHHHH
Q 036427 244 KYQP-DIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD-LST-----CHP--TW---FHKLVTRCYCPTADVAKRAMK 311 (536)
Q Consensus 244 ~~kP-DvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~-----~~~--~~---~~~~~d~vi~~S~~~~~~l~~ 311 (536)
..+| |+|.+|..-+..+|..+ ++++. +.++..+.|- +.. ..+ .. -.-.+|.+-..+....+.+..
T Consensus 130 ~~~~~d~vwvhDYhl~l~p~~l-r~~~~--~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~ 206 (726)
T PRK14501 130 IARPGDVVWVHDYQLMLLPAML-RERLP--DARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLS 206 (726)
T ss_pred hcCCCCEEEEeCchhhhHHHHH-HhhCC--CCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHH
Confidence 3444 78888877665556554 44432 2454444442 221 112 00 123567777777776666543
Q ss_pred h-----CCC-----------CCCEEEeCCCCCCCCCCCCCch-------HHHHHHcCCCCCCCEEEEecCCCCCCcHHHH
Q 036427 312 A-----GLQ-----------ASQIKVYGLPVRPSFVKPVRPK-------VELRRELGMDEDLPAVLLMGGGEGMGPIEAT 368 (536)
Q Consensus 312 ~-----g~~-----------~~ki~vignpv~~~~~~~~~~~-------~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~ 368 (536)
. +.+ ..++.++++++|++.+.+.... +++++.+ +++++|+.+|+....|++...
T Consensus 207 ~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~~il~VgRl~~~Kgi~~~ 283 (726)
T PRK14501 207 SVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDL---RGRKIILSIDRLDYTKGIPRR 283 (726)
T ss_pred HHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHc---CCCEEEEEecCcccccCHHHH
Confidence 1 221 1257788999998776432111 1233332 456788889998888999888
Q ss_pred HHHHHHHhhhcccCCCC----cEEEEEe-c--CC-H---HHHHHHHcC-----------CCCCCEEEecCh--hhHHHHH
Q 036427 369 ARALGNALYDENLGEPI----GQVLVIC-G--RN-K---KLANKLLST-----------DWKIPVQVKGFV--SKMEEAM 424 (536)
Q Consensus 369 l~al~~~l~~~~~~~~~----~~~lvi~-G--~~-~---~l~~~l~~~-----------~~~~~V~~~G~v--~~l~~ll 424 (536)
++++...++ ..|+ +++++++ | .+ + ++++.+.++ .+.+-+.+.+++ +++.++|
T Consensus 284 l~A~~~ll~----~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly 359 (726)
T PRK14501 284 LLAFERFLE----KNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALY 359 (726)
T ss_pred HHHHHHHHH----hCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHH
Confidence 888877654 2343 4454443 2 22 2 233333322 122224456665 5999999
Q ss_pred hhcCeEEECC---C-hHHHHHHHHhCCc----EEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHH
Q 036427 425 GACDCIITKA---G-PGTIAEAMIRGLP----IILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKID 494 (536)
Q Consensus 425 ~~aDv~V~~s---G-~~tllEAma~GlP----VI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~ 494 (536)
+.||+++++| | +++++|||+||+| +|++...+ .+..+. .|.+++ |+++++++|.++++++++
T Consensus 360 ~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G-----~~~~l~---~~llv~P~d~~~la~ai~~~l~~~~~ 431 (726)
T PRK14501 360 RAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAG-----AAAELA---EALLVNPNDIEGIAAAIKRALEMPEE 431 (726)
T ss_pred HhccEEEecccccccCcccceEEEEcCCCCceEEEecccc-----hhHHhC---cCeEECCCCHHHHHHHHHHHHcCCHH
Confidence 9999999998 5 8999999999663 33333222 222243 255554 999999999999985455
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 495 ELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 495 ~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
.++...+++++.+..+.++++++.+++.+++
T Consensus 432 e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 432 EQRERMQAMQERLRRYDVHKWASDFLDELRE 462 (726)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 6666666788888889999999888776654
No 115
>PLN00414 glycosyltransferase family protein
Probab=99.20 E-value=5.1e-08 Score=103.73 Aligned_cols=179 Identities=13% Similarity=0.036 Sum_probs=111.8
Q ss_pred CEEEeCCCCCCCCCC-CCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecC--
Q 036427 318 QIKVYGLPVRPSFVK-PVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGR-- 394 (536)
Q Consensus 318 ki~vignpv~~~~~~-~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~-- 394 (536)
++..+|..+...... .....++..++|.-.+...++++..|+...-...++ ..++..|. ..+..+++++-.
T Consensus 219 ~v~~VGPl~~~~~~~~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~-~e~a~gL~-----~s~~~Flwvvr~~~ 292 (446)
T PLN00414 219 KVLLTGPMLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQF-QEFCLGME-----LTGLPFLIAVMPPK 292 (446)
T ss_pred CeEEEcccCCCcccccCcccHHHHHHHHhcCCCCceEEEeecccccCCHHHH-HHHHHHHH-----HcCCCeEEEEecCC
Confidence 577787654321110 011123455666655667788888887664443333 23333332 133445444321
Q ss_pred --CH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhc--CeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHh
Q 036427 395 --NK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGAC--DCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVV 467 (536)
Q Consensus 395 --~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~a--Dv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv 467 (536)
+. .+.+.+.+.-....+.+.+|+++ .++++++ +++|+++|.++++||+.+|+|+|+.|...+|.. |++.++
T Consensus 293 ~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ-~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~-na~~~~ 370 (446)
T PLN00414 293 GSSTVQEALPEGFEERVKGRGIVWEGWVEQ-PLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVL-ITRLLT 370 (446)
T ss_pred CcccchhhCChhHHHHhcCCCeEEeccCCH-HHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHH-HHHHHH
Confidence 11 11122222111235667799876 5788777 669999999999999999999999999888876 888886
Q ss_pred -hCCceeec-------CCHHHHHHHHHHHhCCCH-HHHHHHHHHHHH
Q 036427 468 -ENGCGKFS-------KSPKEIANMVSQWFGPKI-DELKAMSQNALK 505 (536)
Q Consensus 468 -~~g~g~~~-------~d~~~La~~I~~ll~~d~-~~~~~m~~~a~~ 505 (536)
+.|+|..+ -+.+++.+++++++. ++ +..+++++++++
T Consensus 371 ~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~-~~~e~g~~~r~~a~~ 416 (446)
T PLN00414 371 EELEVSVKVQREDSGWFSKESLRDTVKSVMD-KDSEIGNLVKRNHKK 416 (446)
T ss_pred HHhCeEEEeccccCCccCHHHHHHHHHHHhc-CChhhHHHHHHHHHH
Confidence 56888766 278899999999997 54 445555555544
No 116
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.19 E-value=1.3e-08 Score=100.23 Aligned_cols=219 Identities=18% Similarity=0.253 Sum_probs=136.7
Q ss_pred cccccCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCC--CC-----CC--CCCC-----------CCC-c----hHHHHHH
Q 036427 290 WFHKLVTRCYCPTADVAKRAMK-AGLQASQIKVYGL--PV-----RP--SFVK-----------PVR-P----KVELRRE 343 (536)
Q Consensus 290 ~~~~~~d~vi~~S~~~~~~l~~-~g~~~~ki~vign--pv-----~~--~~~~-----------~~~-~----~~~~r~~ 343 (536)
.+.+.+|.-+|+++.+++++.+ +|+.+ ..++|. |. +. +.|. ... . ...+-++
T Consensus 165 ~fgk~a~~nLcVT~AMr~dL~qnWgi~r--a~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k 242 (444)
T KOG2941|consen 165 YFGKLADYNLCVTKAMREDLIQNWGINR--AKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKK 242 (444)
T ss_pred HhhcccccchhhHHHHHHHHHHhcCCce--eEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccccchhhhhhHhhh
Confidence 4567889999999999988877 57643 333322 21 11 0010 000 0 0111122
Q ss_pred cC-----CCCCCCEEEEecCCCCCC-cHHHHHHHHH---HHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCE
Q 036427 344 LG-----MDEDLPAVLLMGGGEGMG-PIEATARALG---NALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPV 411 (536)
Q Consensus 344 lg-----i~~~~~~il~~gg~~g~k-~~~~~l~al~---~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V 411 (536)
+. ..++.|.++++..++... .+..++.++. +.+.+.....|.. +.+|+|+|+ .+.+++.++.+..--
T Consensus 243 ~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~l-lciITGKGPlkE~Y~~~I~~~~~~~v~ 321 (444)
T KOG2941|consen 243 DASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSL-LCIITGKGPLKEKYSQEIHEKNLQHVQ 321 (444)
T ss_pred cccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcE-EEEEcCCCchhHHHHHHHHHhccccee
Confidence 21 224567777777666643 3444445444 2233322333443 467889997 345566666665322
Q ss_pred EEecCh--hhHHHHHhhcCeEEEC----CC---hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCc-eeecCCHHHH
Q 036427 412 QVKGFV--SKMEEAMGACDCIITK----AG---PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGC-GKFSKSPKEI 481 (536)
Q Consensus 412 ~~~G~v--~~l~~ll~~aDv~V~~----sG---~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~-g~~~~d~~~L 481 (536)
....|. +|.+.+++.||+.|+- || |+.+.+...||+||++.+...-. +++++|. |.+++|.++|
T Consensus 322 ~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~------ELVkh~eNGlvF~Ds~eL 395 (444)
T KOG2941|consen 322 VCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLD------ELVKHGENGLVFEDSEEL 395 (444)
T ss_pred eeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHH------HHHhcCCCceEeccHHHH
Confidence 335565 6999999999997752 46 89999999999999999865433 4777665 5566899999
Q ss_pred HHHHHHHhC---CCHHHHHHHHHHHHHhc---CCchHHHHHH
Q 036427 482 ANMVSQWFG---PKIDELKAMSQNALKLA---RPDAVFRIVQ 517 (536)
Q Consensus 482 a~~I~~ll~---~d~~~~~~m~~~a~~~a---~~~~~~~i~~ 517 (536)
++.+..+++ .+.+.+.++.+++++.. .+..|++++.
T Consensus 396 a~ql~~lf~~fp~~a~~l~~lkkn~~e~~e~RW~~~W~~~~~ 437 (444)
T KOG2941|consen 396 AEQLQMLFKNFPDNADELNQLKKNLREEQELRWDESWERTAL 437 (444)
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHhhHHHHhhhHHHHHHHhhh
Confidence 999999998 25778888888887753 2245555444
No 117
>PLN02208 glycosyltransferase family protein
Probab=99.19 E-value=3.2e-08 Score=105.14 Aligned_cols=201 Identities=15% Similarity=0.053 Sum_probs=119.3
Q ss_pred cCCEEEEcCHHHHHH-HHHhC-CC-CCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHH
Q 036427 294 LVTRCYCPTADVAKR-AMKAG-LQ-ASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATAR 370 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~-l~~~g-~~-~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~ 370 (536)
.++.+++.|-+..+. +.++- -+ ..++..+|....... ......++..+.+.-.++..+|++..|+...-...++.+
T Consensus 193 ~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~-~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e 271 (442)
T PLN02208 193 SCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPD-TSKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQE 271 (442)
T ss_pred cCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcC-CCCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHH
Confidence 455666655444432 33221 11 136777776432211 011113455666654555678888888765433333333
Q ss_pred HHHHH-hhhcccCCCCcEEEEEecC--C--H---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcC--eEEECCChHHHH
Q 036427 371 ALGNA-LYDENLGEPIGQVLVICGR--N--K---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACD--CIITKAGPGTIA 440 (536)
Q Consensus 371 al~~~-l~~~~~~~~~~~~lvi~G~--~--~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aD--v~V~~sG~~tll 440 (536)
.+... +. +..++++.-. + . .+.+.+.+.-...++.+.+|.++ .++|++.. ++|+++|.++++
T Consensus 272 ~~~~l~~s-------~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ-~~iL~H~~v~~FvtHcG~nS~~ 343 (442)
T PLN02208 272 LCLGMELT-------GLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQ-PLILDHPSIGCFVNHCGPGTIW 343 (442)
T ss_pred HHHHHHhC-------CCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCH-HHHhcCCccCeEEccCCchHHH
Confidence 33321 21 1223333221 1 1 11111111112357888899977 46787776 599999999999
Q ss_pred HHHHhCCcEEEeccCCccccCChhhHhh-CCceeecC-------CHHHHHHHHHHHhCCCH-HHHHHHHHHHHH
Q 036427 441 EAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFSK-------SPKEIANMVSQWFGPKI-DELKAMSQNALK 505 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~~-------d~~~La~~I~~ll~~d~-~~~~~m~~~a~~ 505 (536)
||+++|+|+|+.|..++|.. |++.+++ .|.|..+. +.+++.++|+++++ ++ +..+++++++.+
T Consensus 344 Eai~~GVP~l~~P~~~DQ~~-na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~-~~~e~g~~~r~~~~~ 415 (442)
T PLN02208 344 ESLVSDCQMVLIPFLSDQVL-FTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMD-KDSDLGKLVRSNHTK 415 (442)
T ss_pred HHHHcCCCEEecCcchhhHH-HHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhc-CCchhHHHHHHHHHH
Confidence 99999999999999888876 8887776 68887662 67899999999997 54 444555555443
No 118
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=99.17 E-value=6.3e-08 Score=103.90 Aligned_cols=156 Identities=13% Similarity=0.135 Sum_probs=106.8
Q ss_pred HHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-------HHHHHHHcCCCCCC
Q 036427 338 VELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-------KLANKLLSTDWKIP 410 (536)
Q Consensus 338 ~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-------~l~~~l~~~~~~~~ 410 (536)
++..+.+.-.++.++|++..|+...... +.+.+++..+. ..+..++++.+... .+.+.+.+.-...+
T Consensus 271 ~~~~~WLd~~~~~svVyvsfGS~~~~~~-~~~~ela~gL~-----~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g 344 (477)
T PLN02863 271 DDVMTWLDTCEDHKVVYVCFGSQVVLTK-EQMEALASGLE-----KSGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRG 344 (477)
T ss_pred HHHHHHHhcCCCCceEEEEeeceecCCH-HHHHHHHHHHH-----hCCCcEEEEECCCcccccchhhCCHHHHHHhccCC
Confidence 3455666555556788888887653332 33666666665 34557777776321 11111211112346
Q ss_pred EEEecChhhHHHHHhh--cCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeec-------CCHHH
Q 036427 411 VQVKGFVSKMEEAMGA--CDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFS-------KSPKE 480 (536)
Q Consensus 411 V~~~G~v~~l~~ll~~--aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~-------~d~~~ 480 (536)
+.+.+|+++ .++|.+ ++++|+++|.++++||+++|+|+|+.|...+|.. |+..+++ -|+|..+ .+.++
T Consensus 345 ~~v~~w~PQ-~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~-na~~v~~~~gvG~~~~~~~~~~~~~~~ 422 (477)
T PLN02863 345 LVIRGWAPQ-VAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFV-NASLLVDELKVAVRVCEGADTVPDSDE 422 (477)
T ss_pred EEecCCCCH-HHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchh-hHHHHHHhhceeEEeccCCCCCcCHHH
Confidence 888899976 567776 7789999999999999999999999999988876 8888775 4888765 16789
Q ss_pred HHHHHHHHhCCCHHHHHHHHH
Q 036427 481 IANMVSQWFGPKIDELKAMSQ 501 (536)
Q Consensus 481 La~~I~~ll~~d~~~~~~m~~ 501 (536)
+.+++.+++..++++++++.+
T Consensus 423 v~~~v~~~m~~~~~~r~~a~~ 443 (477)
T PLN02863 423 LARVFMESVSENQVERERAKE 443 (477)
T ss_pred HHHHHHHHhhccHHHHHHHHH
Confidence 999999988326666655443
No 119
>PLN02210 UDP-glucosyl transferase
Probab=99.16 E-value=6.4e-08 Score=103.42 Aligned_cols=162 Identities=14% Similarity=0.123 Sum_probs=109.9
Q ss_pred HHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecCh
Q 036427 340 LRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 340 ~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v 417 (536)
..+.+.-.++.++|++..|+.... ..+.+.+++..+. ..+.+++++.+... +..+.+.+.....+..+.+|+
T Consensus 259 ~~~wld~~~~~svvyvsfGS~~~~-~~~~~~e~a~~l~-----~~~~~flw~~~~~~~~~~~~~~~~~~~~~~g~v~~w~ 332 (456)
T PLN02210 259 CMEWLDKQARSSVVYISFGSMLES-LENQVETIAKALK-----NRGVPFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWS 332 (456)
T ss_pred HHHHHhCCCCCceEEEEecccccC-CHHHHHHHHHHHH-----hCCCCEEEEEeCCccccchhhHHhhccCCCeEEEecC
Confidence 344444334456788877775432 2456666766665 34557777665321 111222222112345577998
Q ss_pred hhHHHHHhhcC--eEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeecC--------CHHHHHHHHH
Q 036427 418 SKMEEAMGACD--CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFSK--------SPKEIANMVS 486 (536)
Q Consensus 418 ~~l~~ll~~aD--v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~~--------d~~~La~~I~ 486 (536)
++ .++|++++ ++|+++|.++++||+.+|+|+|+.|...+|.. |++.+++ .|+|..+. +.++++++|+
T Consensus 333 PQ-~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~-na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~ 410 (456)
T PLN02210 333 PQ-EKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPI-DARLLVDVFGIGVRMRNDAVDGELKVEEVERCIE 410 (456)
T ss_pred CH-HHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHH-HHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHH
Confidence 76 47888887 89999999999999999999999999988875 8998987 79987662 6789999999
Q ss_pred HHhCCCHH---HH---HHHHHHHHHhcCCc
Q 036427 487 QWFGPKID---EL---KAMSQNALKLARPD 510 (536)
Q Consensus 487 ~ll~~d~~---~~---~~m~~~a~~~a~~~ 510 (536)
+++. +++ .| +++++.+++...+.
T Consensus 411 ~~m~-~~~g~~~r~~a~~l~~~a~~Av~~g 439 (456)
T PLN02210 411 AVTE-GPAAADIRRRAAELKHVARLALAPG 439 (456)
T ss_pred HHhc-CchHHHHHHHHHHHHHHHHHHhcCC
Confidence 9997 643 33 34455566555553
No 120
>PLN02562 UDP-glycosyltransferase
Probab=99.16 E-value=3.2e-08 Score=105.61 Aligned_cols=155 Identities=14% Similarity=0.065 Sum_probs=106.3
Q ss_pred HHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecChhh
Q 036427 342 RELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSK 419 (536)
Q Consensus 342 ~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v~~ 419 (536)
+.+.-.+...+|++..|+....-..+.+..++..+.. .+..+|++...+. .+.+...+ ...+++.+.+|+++
T Consensus 265 ~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~-----~g~~fiW~~~~~~~~~l~~~~~~-~~~~~~~v~~w~PQ 338 (448)
T PLN02562 265 GWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEA-----SGRPFIWVLNPVWREGLPPGYVE-RVSKQGKVVSWAPQ 338 (448)
T ss_pred HHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHH-----CCCCEEEEEcCCchhhCCHHHHH-HhccCEEEEecCCH
Confidence 4443333345777777775422234556666666652 2346666654321 12111111 12357888899975
Q ss_pred HHHHHhhcC--eEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeecC--CHHHHHHHHHHHhCCCHH
Q 036427 420 MEEAMGACD--CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFSK--SPKEIANMVSQWFGPKID 494 (536)
Q Consensus 420 l~~ll~~aD--v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~~--d~~~La~~I~~ll~~d~~ 494 (536)
.++|++++ ++|+++|.++++||+.+|+|+|+.|..++|.. |++.+++ .|+|.-+. +.++++++|++++. +++
T Consensus 339 -~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~-na~~~~~~~g~g~~~~~~~~~~l~~~v~~~l~-~~~ 415 (448)
T PLN02562 339 -LEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFV-NCAYIVDVWKIGVRISGFGQKEVEEGLRKVME-DSG 415 (448)
T ss_pred -HHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHH-HHHHHHHHhCceeEeCCCCHHHHHHHHHHHhC-CHH
Confidence 57888866 69999999999999999999999999998876 8888876 47777664 78999999999999 888
Q ss_pred HHHHHHHHHHH
Q 036427 495 ELKAMSQNALK 505 (536)
Q Consensus 495 ~~~~m~~~a~~ 505 (536)
++++..+.+.+
T Consensus 416 ~r~~a~~l~~~ 426 (448)
T PLN02562 416 MGERLMKLRER 426 (448)
T ss_pred HHHHHHHHHHH
Confidence 88776654444
No 121
>PLN00164 glucosyltransferase; Provisional
Probab=99.15 E-value=6.9e-08 Score=103.83 Aligned_cols=204 Identities=18% Similarity=0.187 Sum_probs=124.9
Q ss_pred CEEEeCCCCCCC-CCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH
Q 036427 318 QIKVYGLPVRPS-FVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK 396 (536)
Q Consensus 318 ki~vignpv~~~-~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~ 396 (536)
++..+|.-.... ........++..+.+.-.+...+|++..|+.......+ +.+++..+. ..+..++++.....
T Consensus 239 ~v~~vGPl~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q-~~ela~gL~-----~s~~~flWv~~~~~ 312 (480)
T PLN00164 239 TVYPIGPVISLAFTPPAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQ-VREIAAGLE-----RSGHRFLWVLRGPP 312 (480)
T ss_pred ceEEeCCCccccccCCCccchHHHHHHHHhCCCCceEEEEecccccCCHHH-HHHHHHHHH-----HcCCCEEEEEcCCc
Confidence 577777654211 11111123445566544445567888888765444333 666666665 23446666654211
Q ss_pred ----------H----HHHHHHcCCCCCCEEEecChhhHHHHHhhcC--eEEECCChHHHHHHHHhCCcEEEeccCCcccc
Q 036427 397 ----------K----LANKLLSTDWKIPVQVKGFVSKMEEAMGACD--CIITKAGPGTIAEAMIRGLPIILNDFIAGQEA 460 (536)
Q Consensus 397 ----------~----l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aD--v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~ 460 (536)
+ +.+.+.+.-....+.+.+|.++ .++|.+++ ++|+++|.++++||+++|+|+|+.|..++|..
T Consensus 313 ~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ-~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~ 391 (480)
T PLN00164 313 AAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQ-KEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHL 391 (480)
T ss_pred ccccccccccchhhhCChHHHHHhcCCCeEEeecCCH-HHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchh
Confidence 0 1111111111234777789876 57888877 69999999999999999999999999998876
Q ss_pred CChhhHhh-CCceeecC---------CHHHHHHHHHHHhCCCHH-HHHHHHHHH-------HHhcCC-chHHHHHHHHHH
Q 036427 461 GNVPYVVE-NGCGKFSK---------SPKEIANMVSQWFGPKID-ELKAMSQNA-------LKLARP-DAVFRIVQDLHE 521 (536)
Q Consensus 461 ~na~~lv~-~g~g~~~~---------d~~~La~~I~~ll~~d~~-~~~~m~~~a-------~~~a~~-~~~~~i~~~i~~ 521 (536)
|+..+++ .|+|..+. +.+++.++|++++. +++ ..++|++++ ++...+ .++.+..+.+.+
T Consensus 392 -Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~-~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~ 469 (480)
T PLN00164 392 -NAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMG-GGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLAR 469 (480)
T ss_pred -HHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 8887765 68887652 57899999999997 543 233444433 333333 345565666655
Q ss_pred HHhhcCCcC
Q 036427 522 LVRQRNFVP 530 (536)
Q Consensus 522 l~~~~~~~~ 530 (536)
-+..+..-|
T Consensus 470 ~~~~~~~~~ 478 (480)
T PLN00164 470 EIRHGAVAP 478 (480)
T ss_pred HHHhccCCC
Confidence 555554433
No 122
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=99.14 E-value=4.5e-08 Score=95.57 Aligned_cols=308 Identities=16% Similarity=0.105 Sum_probs=178.2
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||||=..+. -|+.....+...|.++ |++|.++....+... .+-..|.+. +..+..... ....
T Consensus 1 mkVwiDI~n~--~hvhfFk~lI~elekk---G~ev~iT~rd~~~v~----~LLd~ygf~------~~~Igk~g~-~tl~- 63 (346)
T COG1817 1 MKVWIDIGNP--PHVHFFKNLIWELEKK---GHEVLITCRDFGVVT----ELLDLYGFP------YKSIGKHGG-VTLK- 63 (346)
T ss_pred CeEEEEcCCc--chhhHHHHHHHHHHhC---CeEEEEEEeecCcHH----HHHHHhCCC------eEeecccCC-ccHH-
Confidence 7899988776 8999999999999999 999988865332110 011111100 000000000 0000
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcC-cccchHHHHHHHHcCCCCCceEEEEec-CCCCcccccccccCCEEEEcC
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVH-PLMQHVPLRILRAKGLLKKIVFTTVIT-DLSTCHPTWFHKLVTRCYCPT 302 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~-~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~~~~~~~~~~~d~vi~~S 302 (536)
-+...+......|.+++.+++||+.+.-+ +.+.+ .+.-.| +|.+.+.. .......+...++++.++++.
T Consensus 64 -~Kl~~~~eR~~~L~ki~~~~kpdv~i~~~s~~l~r----vafgLg----~psIi~~D~ehA~~qnkl~~Pla~~ii~P~ 134 (346)
T COG1817 64 -EKLLESAERVYKLSKIIAEFKPDVAIGKHSPELPR----VAFGLG----IPSIIFVDNEHAEAQNKLTLPLADVIITPE 134 (346)
T ss_pred -HHHHHHHHHHHHHHHHHhhcCCceEeecCCcchhh----HHhhcC----CceEEecCChhHHHHhhcchhhhhheeccc
Confidence 01112334456888899999999999844 33322 233334 67665443 222123456778999999998
Q ss_pred HHHHHHHHHhCCCCCCEEEeCCCCCCCCC-CCCCchHHHHHHcCCCCCCCEEEEecCCCCC-----CcHHHHHHHHHHHh
Q 036427 303 ADVAKRAMKAGLQASQIKVYGLPVRPSFV-KPVRPKVELRRELGMDEDLPAVLLMGGGEGM-----GPIEATARALGNAL 376 (536)
Q Consensus 303 ~~~~~~l~~~g~~~~ki~vignpv~~~~~-~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~-----k~~~~~l~al~~~l 376 (536)
......++..|..+.++. -++++..-.. ..-.+.+++.+++|+.++.+.|++=.-+++. +.-......+.+.+
T Consensus 135 ~~~~~~~~~~G~~p~~i~-~~~giae~~~v~~f~pd~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l 213 (346)
T COG1817 135 AIDEEELLDFGADPNKIS-GYNGIAELANVYGFVPDPEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKEL 213 (346)
T ss_pred ccchHHHHHhCCCcccee-cccceeEEeecccCCCCHHHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHH
Confidence 888888888887776653 2333322111 1123467889999999987777653333221 11123455555655
Q ss_pred hhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCC
Q 036427 377 YDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA 456 (536)
Q Consensus 377 ~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~ 456 (536)
++ .-+ ++.-...++++.++... +++..-..-|--+++--|+++|..+| ...-||+..|+|+|.+..+.
T Consensus 214 ~k-------~gi-V~ipr~~~~~eife~~~---n~i~pk~~vD~l~Llyya~lvig~gg-TMarEaAlLGtpaIs~~pGk 281 (346)
T COG1817 214 KK-------YGI-VLIPREKEQAEIFEGYR---NIIIPKKAVDTLSLLYYATLVIGAGG-TMAREAALLGTPAISCYPGK 281 (346)
T ss_pred Hh-------CcE-EEecCchhHHHHHhhhc---cccCCcccccHHHHHhhhheeecCCc-hHHHHHHHhCCceEEecCCc
Confidence 42 123 33344444455554432 33322223344568889999997655 44579999999999988431
Q ss_pred ccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHH
Q 036427 457 GQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKID 494 (536)
Q Consensus 457 ~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~ 494 (536)
-...-+++++.|.-.-..|+.++.+.+.+++. ++.
T Consensus 282 --ll~vdk~lie~G~~~~s~~~~~~~~~a~~~l~-~~~ 316 (346)
T COG1817 282 --LLAVDKYLIEKGLLYHSTDEIAIVEYAVRNLK-YRR 316 (346)
T ss_pred --cccccHHHHhcCceeecCCHHHHHHHHHHHhh-chh
Confidence 22234557777755444477777777777776 543
No 123
>PLN02173 UDP-glucosyl transferase family protein
Probab=99.12 E-value=1.6e-07 Score=99.88 Aligned_cols=143 Identities=17% Similarity=0.142 Sum_probs=98.0
Q ss_pred HHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecCh
Q 036427 340 LRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 340 ~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v 417 (536)
..+.+.-.++..+|++..|+...-. .+.+.+++..+. +..++++.-... .+.+.+.+.-...++.+.+|.
T Consensus 254 c~~WLd~~~~~svvyvsfGS~~~~~-~~~~~ela~gLs-------~~~flWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~ 325 (449)
T PLN02173 254 CTDWLDKRPQGSVVYIAFGSMAKLS-SEQMEEIASAIS-------NFSYLWVVRASEESKLPPGFLETVDKDKSLVLKWS 325 (449)
T ss_pred HHHHHhcCCCCceEEEEecccccCC-HHHHHHHHHHhc-------CCCEEEEEeccchhcccchHHHhhcCCceEEeCCC
Confidence 4455544455668888888755322 344555665553 123555553211 111111111114578889999
Q ss_pred hhHHHHHhhcC--eEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC--------CHHHHHHHHH
Q 036427 418 SKMEEAMGACD--CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK--------SPKEIANMVS 486 (536)
Q Consensus 418 ~~l~~ll~~aD--v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~--------d~~~La~~I~ 486 (536)
++ .++|++.+ ++|+++|.++++||+++|+|+|+.|...+|.. |+..+++. |+|.-+. +.+++.++++
T Consensus 326 PQ-~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~-Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~ 403 (449)
T PLN02173 326 PQ-LQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPM-NAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIK 403 (449)
T ss_pred CH-HHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchH-HHHHHHHHhCceEEEeecccCCcccHHHHHHHHH
Confidence 86 56888877 89999999999999999999999999888875 99999875 7776542 6799999999
Q ss_pred HHhCCCH
Q 036427 487 QWFGPKI 493 (536)
Q Consensus 487 ~ll~~d~ 493 (536)
+++. ++
T Consensus 404 ~vm~-~~ 409 (449)
T PLN02173 404 EVME-GE 409 (449)
T ss_pred HHhc-CC
Confidence 9997 54
No 124
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.11 E-value=5.4e-08 Score=103.83 Aligned_cols=264 Identities=12% Similarity=0.084 Sum_probs=170.4
Q ss_pred HhhCC-CEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCCC-----ccc--ccc---cccCCEEEEcCHHHHHHHH
Q 036427 243 MKYQP-DIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLST-----CHP--TWF---HKLVTRCYCPTADVAKRAM 310 (536)
Q Consensus 243 ~~~kP-DvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~-----~~~--~~~---~~~~d~vi~~S~~~~~~l~ 310 (536)
+..+| |+|.++..-+..+|..+ ++++. +.++-.+.| -+.. +.| ..+ .-.+|.|=..+....+.++
T Consensus 128 ~~~~~~d~vWVhDYhL~llp~~L-R~~~~--~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl 204 (487)
T TIGR02398 128 LEAAEGATVWVHDYNLWLVPGYI-RQLRP--DLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFV 204 (487)
T ss_pred HhcCCCCEEEEecchhhHHHHHH-HHhCC--CCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHH
Confidence 34455 68888776555555544 44432 244444444 2221 111 111 1256777777777777655
Q ss_pred Hh-----CCCC-----------------------------C---CEEEeCCCCCCCCCCCCC-------chHHHHHHcCC
Q 036427 311 KA-----GLQA-----------------------------S---QIKVYGLPVRPSFVKPVR-------PKVELRRELGM 346 (536)
Q Consensus 311 ~~-----g~~~-----------------------------~---ki~vignpv~~~~~~~~~-------~~~~~r~~lgi 346 (536)
.. |+.. . ++.++|.++|++.+.... ..+++|++++
T Consensus 205 ~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~- 283 (487)
T TIGR02398 205 DAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELA- 283 (487)
T ss_pred HHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcC-
Confidence 41 2210 1 256788888887653221 1234677776
Q ss_pred CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCC----cEEEEEecCC----H---HHHHHHHc-----------
Q 036427 347 DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPI----GQVLVICGRN----K---KLANKLLS----------- 404 (536)
Q Consensus 347 ~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~----~~~lvi~G~~----~---~l~~~l~~----------- 404 (536)
++++|+.+++....|++...++++.+.+. .+|+ +.++.++... + ++++++++
T Consensus 284 --~~kiIl~VDRLDy~KGI~~kl~Afe~~L~----~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~ 357 (487)
T TIGR02398 284 --GVKLILSAERVDYTKGILEKLNAYERLLE----RRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFAR 357 (487)
T ss_pred --CceEEEEecccccccCHHHHHHHHHHHHH----hCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCC
Confidence 56788888888888999888888877665 3454 3444443321 1 23333433
Q ss_pred CCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCC----cEEEeccCCccccCChhhHhhCCceee
Q 036427 405 TDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTIAEAMIRGL----PIILNDFIAGQEAGNVPYVVENGCGKF 474 (536)
Q Consensus 405 ~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tllEAma~Gl----PVI~~~~~~~~e~~na~~lv~~g~g~~ 474 (536)
.++.+-+.+.+.+ +++..+|+.||+++.+| | .++..|+++|+. |+|++...+.. ..+ ..+.+
T Consensus 358 ~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa-----~~l---~~All 429 (487)
T TIGR02398 358 IGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAA-----VEL---KGALL 429 (487)
T ss_pred CCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccccch-----hhc---CCCEE
Confidence 1344556777776 58999999999999998 5 789999999998 99998754422 112 23556
Q ss_pred cC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 475 SK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 475 ~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
++ |+++++++|.+.|+|.++.|++-.+.-++....+...+.++..++-++
T Consensus 430 VNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~ 481 (487)
T TIGR02398 430 TNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVS 481 (487)
T ss_pred ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 65 999999999999997777777777777788888888888887776554
No 125
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.10 E-value=1.9e-08 Score=100.91 Aligned_cols=211 Identities=21% Similarity=0.253 Sum_probs=143.8
Q ss_pred cCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCC--CEEEEecCCCCCCcHHHHHHH
Q 036427 294 LVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDL--PAVLLMGGGEGMGPIEATARA 371 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~--~~il~~gg~~g~k~~~~~l~a 371 (536)
..+.++..+............. .++.+++++++...+... ...+..+. ..++++|+....++....+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~ 220 (381)
T COG0438 150 LADRVIAVSPALKELLEALGVP-NKIVVIPNGIDTEKFAPA--------RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEA 220 (381)
T ss_pred cccEEEECCHHHHHHHHHhCCC-CCceEecCCcCHHHcCcc--------ccCCCcccCceEEEEeeccChhcCHHHHHHH
Confidence 3677788888775555554433 367788888887755431 11222333 577788886555777776666
Q ss_pred HHHHhhhcccCCCCcEEEEEecCCH----HHHHHHHcCCCCCCEEEecChh--hHHHHHhhcCeEEECC---C-hHHHHH
Q 036427 372 LGNALYDENLGEPIGQVLVICGRNK----KLANKLLSTDWKIPVQVKGFVS--KMEEAMGACDCIITKA---G-PGTIAE 441 (536)
Q Consensus 372 l~~~l~~~~~~~~~~~~lvi~G~~~----~l~~~l~~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~s---G-~~tllE 441 (536)
+..... ..++..+ ++.|.+. .+.+.+.+.....++.+.|+++ ++..+++.||++++|+ + +.+++|
T Consensus 221 ~~~~~~----~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~E 295 (381)
T COG0438 221 AAKLKK----RGPDIKL-VIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLE 295 (381)
T ss_pred HHHhhh----hcCCeEE-EEEcCCCccHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHH
Confidence 654432 1122444 4455553 2444555555567899999986 7888899999999995 3 788999
Q ss_pred HHHhCCcEEEeccCCccccCChhhHhhCC-ceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHH
Q 036427 442 AMIRGLPIILNDFIAGQEAGNVPYVVENG-CGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQ 517 (536)
Q Consensus 442 Ama~GlPVI~~~~~~~~e~~na~~lv~~g-~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~ 517 (536)
||++|+|||+++.++..+ ++..+ .|.++. +.+++++++..+++ +++.++.+.+.+++.. ..+.++++++
T Consensus 296 a~a~g~pvi~~~~~~~~e------~~~~~~~g~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (381)
T COG0438 296 AMAAGTPVIASDVGGIPE------VVEDGETGLLVPPGDVEELADALEQLLE-DPELREELGEAARERVEEEFSWERIAE 368 (381)
T ss_pred HHhcCCcEEECCCCChHH------HhcCCCceEecCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 999999999999764444 34333 355443 58999999999999 8877888887554443 5789999988
Q ss_pred HHHHHHhh
Q 036427 518 DLHELVRQ 525 (536)
Q Consensus 518 ~i~~l~~~ 525 (536)
.+.+++..
T Consensus 369 ~~~~~~~~ 376 (381)
T COG0438 369 QLLELYEE 376 (381)
T ss_pred HHHHHHHH
Confidence 87776654
No 126
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=99.08 E-value=3e-07 Score=98.05 Aligned_cols=190 Identities=12% Similarity=0.071 Sum_probs=117.1
Q ss_pred cCCEEEEcCHHHHHH-HHHhC--CCCCCEEEeCCCCCC-CCCCC-CCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHH
Q 036427 294 LVTRCYCPTADVAKR-AMKAG--LQASQIKVYGLPVRP-SFVKP-VRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEAT 368 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~-l~~~g--~~~~ki~vignpv~~-~~~~~-~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~ 368 (536)
.++.+++.|-+..+. +.++- ....++..+|..... ..-.. .....+..+.+.-.+...+|++..|+...-. .+-
T Consensus 203 ~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~-~~q 281 (451)
T PLN02410 203 TASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALME-INE 281 (451)
T ss_pred cCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCCCccccccchHHHHHHHhCCCCcEEEEEccccccCC-HHH
Confidence 456666655544432 22211 011357777754311 10000 1111223344444445678888888765333 334
Q ss_pred HHHHHHHhhhcccCCCCcEEEEEecCC----HH----HHHHHHcCCCCCCEEEecChhhHHHHHhhcCe--EEECCChHH
Q 036427 369 ARALGNALYDENLGEPIGQVLVICGRN----KK----LANKLLSTDWKIPVQVKGFVSKMEEAMGACDC--IITKAGPGT 438 (536)
Q Consensus 369 l~al~~~l~~~~~~~~~~~~lvi~G~~----~~----l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv--~V~~sG~~t 438 (536)
+..++..+. ..+..++++...+ .+ +.+.+.+. ...+..+.+|+++ .++|++.++ +|+++|.++
T Consensus 282 ~~ela~gLe-----~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er-~~~~g~v~~w~PQ-~~iL~h~~v~~fvtH~G~nS 354 (451)
T PLN02410 282 VMETASGLD-----SSNQQFLWVIRPGSVRGSEWIESLPKEFSKI-ISGRGYIVKWAPQ-KEVLSHPAVGGFWSHCGWNS 354 (451)
T ss_pred HHHHHHHHH-----hcCCCeEEEEccCcccccchhhcCChhHHHh-ccCCeEEEccCCH-HHHhCCCccCeeeecCchhH
Confidence 555666664 2334577765522 11 11121111 2356788899976 568888555 999999999
Q ss_pred HHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC---CHHHHHHHHHHHhCCCH
Q 036427 439 IAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK---SPKEIANMVSQWFGPKI 493 (536)
Q Consensus 439 llEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~---d~~~La~~I~~ll~~d~ 493 (536)
++||+++|+|+|+.|...+|.. |++.+++. |.|..+. +.++++++|++++. ++
T Consensus 355 ~~Ea~~~GvP~l~~P~~~DQ~~-na~~~~~~~~~G~~~~~~~~~~~v~~av~~lm~-~~ 411 (451)
T PLN02410 355 TLESIGEGVPMICKPFSSDQKV-NARYLECVWKIGIQVEGDLDRGAVERAVKRLMV-EE 411 (451)
T ss_pred HHHHHHcCCCEEeccccccCHH-HHHHHHHHhCeeEEeCCcccHHHHHHHHHHHHc-CC
Confidence 9999999999999999888765 88988876 8887663 88999999999998 65
No 127
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=99.06 E-value=3.1e-07 Score=98.32 Aligned_cols=197 Identities=15% Similarity=0.186 Sum_probs=121.5
Q ss_pred CEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecC---
Q 036427 318 QIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGR--- 394 (536)
Q Consensus 318 ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~--- 394 (536)
++..+|.-+.+.. .....++..+.+.-.+...+|++..|+...-. .+-+.+++..+.. .+..+|++...
T Consensus 233 ~v~~VGPl~~~~~--~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~-~~q~~ela~gL~~-----s~~~flW~~r~~~~ 304 (481)
T PLN02992 233 PVYPIGPLCRPIQ--SSKTDHPVLDWLNKQPNESVLYISFGSGGSLS-AKQLTELAWGLEM-----SQQRFVWVVRPPVD 304 (481)
T ss_pred ceEEecCccCCcC--CCcchHHHHHHHHcCCCCceEEEeecccccCC-HHHHHHHHHHHHH-----cCCCEEEEEeCCcc
Confidence 4777776543221 11112334455543344568888778764322 3345555555542 23456666621
Q ss_pred C---------------H----HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCe--EEECCChHHHHHHHHhCCcEEEec
Q 036427 395 N---------------K----KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDC--IITKAGPGTIAEAMIRGLPIILND 453 (536)
Q Consensus 395 ~---------------~----~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv--~V~~sG~~tllEAma~GlPVI~~~ 453 (536)
+ + .+.+.+.+.-...++.+.+|+++ .+++.+..+ +|+++|.++++||+.+|+|+|+.|
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ-~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P 383 (481)
T PLN02992 305 GSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQ-AEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWP 383 (481)
T ss_pred cccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCH-HHHhCCcccCeeEecCchhHHHHHHHcCCCEEecC
Confidence 0 0 01111111112346888899976 578888886 999999999999999999999999
Q ss_pred cCCccccCChhhHh-hCCceeecC------CHHHHHHHHHHHhCCCH---H---HHHHHHHHHHHhcC---Cc----hHH
Q 036427 454 FIAGQEAGNVPYVV-ENGCGKFSK------SPKEIANMVSQWFGPKI---D---ELKAMSQNALKLAR---PD----AVF 513 (536)
Q Consensus 454 ~~~~~e~~na~~lv-~~g~g~~~~------d~~~La~~I~~ll~~d~---~---~~~~m~~~a~~~a~---~~----~~~ 513 (536)
...+|.. |+..++ +.|.|..+. +.+++.++|.+++. ++ + ..+++++.+++... .. ..+
T Consensus 384 ~~~DQ~~-na~~~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~-~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~ 461 (481)
T PLN02992 384 LFAEQNM-NAALLSDELGIAVRSDDPKEVISRSKIEALVRKVMV-EEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLC 461 (481)
T ss_pred ccchhHH-HHHHHHHHhCeeEEecCCCCcccHHHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHH
Confidence 9988875 888885 788887662 67899999999997 53 2 22444455555542 22 334
Q ss_pred HHHHHHHHHHhh
Q 036427 514 RIVQDLHELVRQ 525 (536)
Q Consensus 514 ~i~~~i~~l~~~ 525 (536)
++++.+...+++
T Consensus 462 ~~v~~~~~~~~~ 473 (481)
T PLN02992 462 RVTKECQRFLER 473 (481)
T ss_pred HHHHHHHHHHHH
Confidence 455555555554
No 128
>PLN02764 glycosyltransferase family protein
Probab=99.05 E-value=3.6e-07 Score=97.04 Aligned_cols=178 Identities=13% Similarity=0.077 Sum_probs=110.5
Q ss_pred CEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecC--C
Q 036427 318 QIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGR--N 395 (536)
Q Consensus 318 ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~--~ 395 (536)
++..+|..+.... ......++..+.+.-.+...++++..|+...-...+ +..++..|. ..+..++++... +
T Consensus 226 ~v~~VGPL~~~~~-~~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q-~~ela~gL~-----~s~~pflwv~r~~~~ 298 (453)
T PLN02764 226 KVLLTGPVFPEPD-KTRELEERWVKWLSGYEPDSVVFCALGSQVILEKDQ-FQELCLGME-----LTGSPFLVAVKPPRG 298 (453)
T ss_pred cEEEeccCccCcc-ccccchhHHHHHHhCCCCCceEEEeecccccCCHHH-HHHHHHHHH-----hCCCCeEEEEeCCCC
Confidence 5777876532110 011113445666665566778888888765433222 233333332 233445555432 1
Q ss_pred --H---HHHHHHHcCCCCCCEEEecChhhHHHHHhhc--CeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhh
Q 036427 396 --K---KLANKLLSTDWKIPVQVKGFVSKMEEAMGAC--DCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE 468 (536)
Q Consensus 396 --~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~a--Dv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~ 468 (536)
. .+.+.+.+.-....+.+.+|+++ .++++.. .++|+++|.++++||+.+|+|+|+.|...+|.. |++.+++
T Consensus 299 ~~~~~~~lp~~f~~r~~grG~v~~~W~PQ-~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~-na~~l~~ 376 (453)
T PLN02764 299 SSTIQEALPEGFEERVKGRGVVWGGWVQQ-PLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVL-NTRLLSD 376 (453)
T ss_pred CcchhhhCCcchHhhhccCCcEEeCCCCH-HHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHH-HHHHHHH
Confidence 1 11111111111335777899976 5678775 559999999999999999999999999888875 8888864
Q ss_pred -CCceeec-------CCHHHHHHHHHHHhCCCH-HHHHHHHHHHHH
Q 036427 469 -NGCGKFS-------KSPKEIANMVSQWFGPKI-DELKAMSQNALK 505 (536)
Q Consensus 469 -~g~g~~~-------~d~~~La~~I~~ll~~d~-~~~~~m~~~a~~ 505 (536)
.|+|..+ -+.+++.++++++++ ++ +..+++.+++++
T Consensus 377 ~~g~gv~~~~~~~~~~~~e~i~~av~~vm~-~~~~~g~~~r~~a~~ 421 (453)
T PLN02764 377 ELKVSVEVAREETGWFSKESLRDAINSVMK-RDSEIGNLVKKNHTK 421 (453)
T ss_pred HhceEEEeccccCCccCHHHHHHHHHHHhc-CCchhHHHHHHHHHH
Confidence 5777654 178999999999998 64 445555555443
No 129
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.05 E-value=4.1e-10 Score=99.62 Aligned_cols=126 Identities=25% Similarity=0.404 Sum_probs=77.5
Q ss_pred CEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeE
Q 036427 351 PAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCI 430 (536)
Q Consensus 351 ~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~ 430 (536)
.+++++|+....+.+..+++++.+.+.+ ..|++.+.+ .|.+++ +++++ ..++|++.|+++++.++|+.||++
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~---~~p~~~l~i-~G~~~~---~l~~~-~~~~v~~~g~~~e~~~~l~~~dv~ 74 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKE---KHPDIELII-IGNGPD---ELKRL-RRPNVRFHGFVEELPEILAAADVG 74 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHH---HSTTEEEEE-ECESS----HHCCH-HHCTEEEE-S-HHHHHHHHC-SEE
T ss_pred ccccccccccccccccchhhhHHHHHHH---HCcCEEEEE-EeCCHH---HHHHh-cCCCEEEcCCHHHHHHHHHhCCEE
Confidence 4566666666667777777733344432 246777644 565543 13332 245999999999999999999999
Q ss_pred EECC----C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHhC
Q 036427 431 ITKA----G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWFG 490 (536)
Q Consensus 431 V~~s----G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~ 490 (536)
+.|. + +++++|||++|+|+|+++. +.. ......+.+.++ +|+++++++|.++++
T Consensus 75 l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~-----~~~~~~~~~~~~~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 75 LIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAE-----GIVEEDGCGVLVANDPEELAEAIERLLN 134 (135)
T ss_dssp EE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCH-----CHS---SEEEE-TT-HHHHHHHHHHHHH
T ss_pred EEEeeCCCcCcHHHHHHHHhCCCEEECCc-chh-----hheeecCCeEEECCCHHHHHHHHHHHhc
Confidence 9985 3 7999999999999999986 211 123345666655 589999999999986
No 130
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.03 E-value=9e-09 Score=111.33 Aligned_cols=202 Identities=14% Similarity=0.110 Sum_probs=140.4
Q ss_pred ccCCEEEEcCHHHHHHHHHhCCCC---CCEEEeCCCCCCCCCCCCCchHHHHHHcCCC-CCCCEEEEec--CCCCCCcHH
Q 036427 293 KLVTRCYCPTADVAKRAMKAGLQA---SQIKVYGLPVRPSFVKPVRPKVELRRELGMD-EDLPAVLLMG--GGEGMGPIE 366 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~~g~~~---~ki~vignpv~~~~~~~~~~~~~~r~~lgi~-~~~~~il~~g--g~~g~k~~~ 366 (536)
..+|.+++.++...+.+.+..-.. .++..++.. +.... ++.. .....+++++ +. ..+.+.
T Consensus 271 ~~~d~iIv~T~~q~~~l~~~~~~~~~~~~v~~Ip~~-~~~~~------------~~~s~r~~~~~I~v~idrL-~ek~~~ 336 (519)
T TIGR03713 271 SRADLIIVDREDIERLLEENYRENYVEFDISRITPF-DTRLR------------LGQSQQLYETEIGFWIDGL-SDEELQ 336 (519)
T ss_pred hhcCeEEEcCHHHHHHHHHHhhhcccCCcceeeCcc-ceEEe------------cChhhcccceEEEEEcCCC-ChHHHH
Confidence 456778888877666665431111 223334321 11111 1111 1122455566 66 778888
Q ss_pred HHHHHHHHHhhhcccCCCCcEEEEEecCCH------HHHHHHHcCCCC-----------------------------CCE
Q 036427 367 ATARALGNALYDENLGEPIGQVLVICGRNK------KLANKLLSTDWK-----------------------------IPV 411 (536)
Q Consensus 367 ~~l~al~~~l~~~~~~~~~~~~lvi~G~~~------~l~~~l~~~~~~-----------------------------~~V 411 (536)
.++.++.+... ..|++.+. +.|.+. .+.+.+++++.. .+|
T Consensus 337 ~~I~av~~~~~----~~p~~~L~-~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 411 (519)
T TIGR03713 337 QILQQLLQYIL----KNPDYELK-ILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERI 411 (519)
T ss_pred HHHHHHHHHHh----hCCCeEEE-EEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEE
Confidence 88998888776 36887753 344332 222333333222 689
Q ss_pred EEecChh--hHHHHHhhcCeEEECC---ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHH
Q 036427 412 QVKGFVS--KMEEAMGACDCIITKA---GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVS 486 (536)
Q Consensus 412 ~~~G~v~--~l~~ll~~aDv~V~~s---G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~ 486 (536)
+|.|+.. ++.+.|..+.++|..| |-.+.+||++.|+|+| +. +....+.+...|.++.|..+|+++|.
T Consensus 412 ~f~gy~~e~dl~~~~~~arl~id~s~~eg~~~~ieAiS~GiPqI--ny------g~~~~V~d~~NG~li~d~~~l~~al~ 483 (519)
T TIGR03713 412 AFTTLTNEEDLISALDKLRLIIDLSKEPDLYTQISGISAGIPQI--NK------VETDYVEHNKNGYIIDDISELLKALD 483 (519)
T ss_pred EEEecCCHHHHHHHHhhheEEEECCCCCChHHHHHHHHcCCCee--ec------CCceeeEcCCCcEEeCCHHHHHHHHH
Confidence 9999987 9999999999999987 5239999999999999 22 22333566667888899999999999
Q ss_pred HHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 036427 487 QWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHEL 522 (536)
Q Consensus 487 ~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l 522 (536)
.+|+ +++.+.++...+.+.+.+++.+.+++.|.++
T Consensus 484 ~~L~-~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 484 YYLD-NLKNWNYSLAYSIKLIDDYSSENIIERLNEL 518 (519)
T ss_pred HHHh-CHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 9999 9999999999999999999999999999875
No 131
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.00 E-value=6e-09 Score=95.56 Aligned_cols=157 Identities=18% Similarity=0.133 Sum_probs=88.0
Q ss_pred EEEEe--CCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 147 VLILM--SDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 147 IL~~~--~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|+++. ....||.++.+..|+++|.++ |++|.++......... .. ..... .... ....
T Consensus 1 ili~~~~~~~~GG~e~~~~~l~~~l~~~---G~~v~v~~~~~~~~~~-~~-~~~~~---~~~~-------~~~~------ 59 (177)
T PF13439_consen 1 ILITNIFLPNIGGAERVVLNLARALAKR---GHEVTVVSPGVKDPIE-EE-LVKIF---VKIP-------YPIR------ 59 (177)
T ss_dssp -EEECC-TTSSSHHHHHHHHHHHHHHHT---T-EEEEEESS-TTS-S-ST-EEEE------TT--------SST------
T ss_pred CEEEEecCCCCChHHHHHHHHHHHHHHC---CCEEEEEEcCCCccch-hh-cccee---eeee-------cccc------
Confidence 45554 223489999999999999999 8898877543322111 11 00000 0000 0000
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC-----------------cc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST-----------------CH 287 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-----------------~~ 287 (536)
............+.+++++.+||+||++.+..........+ ++|.+...|+... ..
T Consensus 60 -~~~~~~~~~~~~~~~~i~~~~~DiVh~~~~~~~~~~~~~~~------~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~ 132 (177)
T PF13439_consen 60 -KRFLRSFFFMRRLRRLIKKEKPDIVHIHGPPAFWIALLACR------KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRI 132 (177)
T ss_dssp -SS--HHHHHHHHHHHHHHHHT-SEEECCTTHCCCHHHHHHH------CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCT
T ss_pred -cccchhHHHHHHHHHHHHHcCCCeEEecccchhHHHHHhcc------CCCEEEEeCCCcccccccccccchhhhhhhhh
Confidence 00113344556888899999999998887654433222222 2788766654320 00
Q ss_pred cccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCC
Q 036427 288 PTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFV 331 (536)
Q Consensus 288 ~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~ 331 (536)
..++.+.+|.++++|+.+++.+.++|++++++.+++||+|.+.|
T Consensus 133 ~~~~~~~~~~ii~vS~~~~~~l~~~~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 133 ERKLYKKADRIIAVSESTKDELIKFGIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp THHHHCCSSEEEESSHHHHHHHHHHT--SS-EEE----B-CCCH
T ss_pred hhhHHhcCCEEEEECHHHHHHHHHhCCcccCCEEEECCccHHHc
Confidence 12345789999999999999999999999999999999998765
No 132
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=98.97 E-value=5.6e-07 Score=95.86 Aligned_cols=161 Identities=14% Similarity=0.139 Sum_probs=104.4
Q ss_pred HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCC---------HH---H--HHHHHc
Q 036427 339 ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRN---------KK---L--ANKLLS 404 (536)
Q Consensus 339 ~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~---------~~---l--~~~l~~ 404 (536)
+..+.+.-.+.+.+|++..|+...- ..+.+.+++..+.. .+..++++.... .. + .+.+.+
T Consensus 250 ~~~~wLd~~~~~sVvyvsfGS~~~l-~~~q~~ela~gL~~-----s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e 323 (455)
T PLN02152 250 SYTLWLDSKTESSVIYVSFGTMVEL-SKKQIEELARALIE-----GKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRH 323 (455)
T ss_pred HHHHHhhCCCCCceEEEEecccccC-CHHHHHHHHHHHHH-----cCCCeEEEEecCcccccccccccccccccchhHHH
Confidence 4556665445567888887875422 23445556666542 223566665431 00 0 011111
Q ss_pred CCCCCCEEEecChhhHHHHHhhcC--eEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhh---CCceeec----
Q 036427 405 TDWKIPVQVKGFVSKMEEAMGACD--CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE---NGCGKFS---- 475 (536)
Q Consensus 405 ~~~~~~V~~~G~v~~l~~ll~~aD--v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~---~g~g~~~---- 475 (536)
....+..+.+|+++ .++|++.+ ++|+++|.++++||+.+|+|+|+.|...+|.. |+..+++ .|.+...
T Consensus 324 -~~~~~g~v~~W~PQ-~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~-na~~~~~~~~~G~~~~~~~~~ 400 (455)
T PLN02152 324 -ELEEVGMIVSWCSQ-IEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPA-NAKLLEEIWKTGVRVRENSEG 400 (455)
T ss_pred -hccCCeEEEeeCCH-HHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchH-HHHHHHHHhCceEEeecCcCC
Confidence 13457788899976 46888888 59999999999999999999999999888865 8888887 3444332
Q ss_pred -CCHHHHHHHHHHHhCCCHH--HHHH---HHHHHHHhcCC
Q 036427 476 -KSPKEIANMVSQWFGPKID--ELKA---MSQNALKLARP 509 (536)
Q Consensus 476 -~d~~~La~~I~~ll~~d~~--~~~~---m~~~a~~~a~~ 509 (536)
-+.+++.++|+++++ ++. .|++ +++.+++.+.+
T Consensus 401 ~~~~e~l~~av~~vm~-~~~~~~r~~a~~~~~~~~~a~~~ 439 (455)
T PLN02152 401 LVERGEIRRCLEAVME-EKSVELRESAEKWKRLAIEAGGE 439 (455)
T ss_pred cCcHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHcC
Confidence 168999999999997 543 3333 34555555444
No 133
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=98.94 E-value=5.4e-06 Score=87.64 Aligned_cols=336 Identities=12% Similarity=0.078 Sum_probs=177.2
Q ss_pred ceEEEEeC-CCC-chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCc--chhHHHHHHhhcc------------
Q 036427 145 KKVLILMS-DTG-GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQ--LPRSYNFLVKHGP------------ 208 (536)
Q Consensus 145 mKIL~~~~-~~G-gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~--~~~~y~~~~~~~~------------ 208 (536)
|||+|... ++| .|.+.....+.+.|+++.| +.++.|.+.....+.+.... +.... ++.....
T Consensus 1 ~~i~i~G~~g~~N~GdeAil~~ii~~l~~~~p-~~~i~v~S~~P~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~ 78 (426)
T PRK10017 1 MKLLILGNHTCGNRGDSAILRGLLDAINILNP-HAEVDVMSRYPVSSSWLLNRPVMGDPL-FLQMKQHNSAAGVVGRVKK 78 (426)
T ss_pred CeEEEEccccCCCccHHHHHHHHHHHHHhhCC-CCeEEEEecCccchhhhcccccccchh-hhhhhhcccccccchhHHH
Confidence 79999853 332 5999999999999999977 58888888765543321110 00000 0000000
Q ss_pred c----c--ceeec-CCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCccc-----c--hHH-HHHHHHcCCCCC
Q 036427 209 L----W--KMTYY-GTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLM-----Q--HVP-LRILRAKGLLKK 273 (536)
Q Consensus 209 l----~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~-----~--~i~-~~~~~~~g~~~~ 273 (536)
. | ..++. ...... ............+.+.++ +.|+++..+.-. . .+. +..++..|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~--~aDlvI~gGG~lfqD~y~~~~~~y~l~A~l~g---- 148 (426)
T PRK10017 79 VLRRRYQHQVLLSRVTDTGK----LRNIAIAQGFTDFVRLLS--GYDAIIQVGGSFFVDLYGVPQFEHALCAFMAK---- 148 (426)
T ss_pred HHHhhhhHHHHHhhhccccc----cccccchhhHHHHHHHHH--hCCEEEECCCCccccCcccHHHHHHHHHHHcC----
Confidence 0 0 00000 000000 000000111223333344 379999876321 1 111 22344445
Q ss_pred ceEEEEecCCCCccc-------ccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCC--chHHHHHHc
Q 036427 274 IVFTTVITDLSTCHP-------TWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVR--PKVELRREL 344 (536)
Q Consensus 274 ip~v~~~~d~~~~~~-------~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~--~~~~~r~~l 344 (536)
.|++.+......... +|+.+.+|.+.+-.+...+.+.+.|++..++.+.+-|+..-...... +...+...+
T Consensus 149 kpv~l~gqsiGPf~~~~~r~l~r~vl~~~~~ItvRD~~S~~~Lk~lGv~~~~v~~~aDpAF~L~~~~~~~~~~~~~~~~~ 228 (426)
T PRK10017 149 KPLYMIGHSVGPFQDEQFNQLANYVFGHCDALILRESVSLDLMKRSNITTAKVEHGVDTAWLVDHHTEDFTASYAVQHWL 228 (426)
T ss_pred CCEEEECCcCCCcCCHHHHHHHHHHHhcCCEEEEccHHHHHHHHHhCCCccceEEecChhhhCCccccccccchhhhhhh
Confidence 687777666553322 45667899999999999999999999888888876543221100000 111122223
Q ss_pred CCCCCCCEEEEecCCCC-C--------CcHHHHHHHHHHHhhhcccCCCCcEEEEEe--------cCCH-HHHHHHHcC-
Q 036427 345 GMDEDLPAVLLMGGGEG-M--------GPIEATARALGNALYDENLGEPIGQVLVIC--------GRNK-KLANKLLST- 405 (536)
Q Consensus 345 gi~~~~~~il~~gg~~g-~--------k~~~~~l~al~~~l~~~~~~~~~~~~lvi~--------G~~~-~l~~~l~~~- 405 (536)
+...+.+.|.+..+.+. . ....+.+..+++.+. ..+.+++++. +..+ ...+.+.+.
T Consensus 229 ~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li-----~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~ 303 (426)
T PRK10017 229 DVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRII-----DEGYQVIALSTCTGIDSYNKDDRMVALNLRQHV 303 (426)
T ss_pred cccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHH-----HCCCeEEEEecccCccCCCCchHHHHHHHHHhc
Confidence 33344567766656443 1 122334444444443 2245554443 2233 222333332
Q ss_pred CCCCCEEE-ecCh--hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceee-cC----C
Q 036427 406 DWKIPVQV-KGFV--SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKF-SK----S 477 (536)
Q Consensus 406 ~~~~~V~~-~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~-~~----d 477 (536)
....++++ .+.. .++..+++.||++|..=- ..++=|++.|+|+|.+.+.. .....+...|...+ +. +
T Consensus 304 ~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~Rl-Ha~I~a~~~gvP~i~i~Y~~----K~~~~~~~lg~~~~~~~~~~l~ 378 (426)
T PRK10017 304 SDPARYHVVMDELNDLEMGKILGACELTVGTRL-HSAIISMNFGTPAIAINYEH----KSAGIMQQLGLPEMAIDIRHLL 378 (426)
T ss_pred ccccceeEecCCCChHHHHHHHhhCCEEEEecc-hHHHHHHHcCCCEEEeeehH----HHHHHHHHcCCccEEechhhCC
Confidence 22233333 3222 367799999999996433 45677999999999999732 12333444454433 22 6
Q ss_pred HHHHHHHHHHHhCCCHHH-HHHHHHHH
Q 036427 478 PKEIANMVSQWFGPKIDE-LKAMSQNA 503 (536)
Q Consensus 478 ~~~La~~I~~ll~~d~~~-~~~m~~~a 503 (536)
.++|.+.+.++++ +.+. ++++.++.
T Consensus 379 ~~~Li~~v~~~~~-~r~~~~~~l~~~v 404 (426)
T PRK10017 379 DGSLQAMVADTLG-QLPALNARLAEAV 404 (426)
T ss_pred HHHHHHHHHHHHh-CHHHHHHHHHHHH
Confidence 7889999999999 7554 44444433
No 134
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=98.90 E-value=1.9e-08 Score=109.33 Aligned_cols=172 Identities=16% Similarity=0.172 Sum_probs=108.4
Q ss_pred HHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh
Q 036427 338 VELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 338 ~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v 417 (536)
+++...+.-..++.+|++..|+.......+.+..+++++.+ -+. ++++...... ...+ ..|+.+..|+
T Consensus 264 ~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~----~~~-~~iW~~~~~~--~~~l-----~~n~~~~~W~ 331 (500)
T PF00201_consen 264 EELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFEN----LPQ-RFIWKYEGEP--PENL-----PKNVLIVKWL 331 (500)
T ss_dssp HHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHC----STT-EEEEEETCSH--GCHH-----HTTEEEESS-
T ss_pred cccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhh----CCC-cccccccccc--cccc-----cceEEEeccc
Confidence 34444443223567888888876544445557778887762 233 7777665532 1222 2489999999
Q ss_pred hhHHHHHhh--cCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCC
Q 036427 418 SKMEEAMGA--CDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGP 491 (536)
Q Consensus 418 ~~l~~ll~~--aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~ 491 (536)
++ .++|+. .+++|+++|.+++.||+.+|+|+|+.|..++|.. |+..+++.|.|..++ +.+++.++|+++++
T Consensus 332 PQ-~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~-na~~~~~~G~g~~l~~~~~~~~~l~~ai~~vl~- 408 (500)
T PF00201_consen 332 PQ-NDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPR-NAARVEEKGVGVVLDKNDLTEEELRAAIREVLE- 408 (500)
T ss_dssp -H-HHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHH-HHHHHHHTTSEEEEGGGC-SHHHHHHHHHHHHH-
T ss_pred cc-hhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCc-cceEEEEEeeEEEEEecCCcHHHHHHHHHHHHh-
Confidence 86 577864 5679999999999999999999999999998875 999999999998875 78999999999999
Q ss_pred CHHHHHHHHHHHHHhcCC--chHHHHHHHHHHHHh
Q 036427 492 KIDELKAMSQNALKLARP--DAVFRIVQDLHELVR 524 (536)
Q Consensus 492 d~~~~~~m~~~a~~~a~~--~~~~~i~~~i~~l~~ 524 (536)
|+.+++++.+.+..+... ...++.+.-++-+++
T Consensus 409 ~~~y~~~a~~ls~~~~~~p~~p~~~~~~~ie~v~~ 443 (500)
T PF00201_consen 409 NPSYKENAKRLSSLFRDRPISPLERAVWWIEYVAR 443 (500)
T ss_dssp SHHHHHHHHHHHHTTT-------------------
T ss_pred hhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 998888777776654432 334444444444443
No 135
>PLN02534 UDP-glycosyltransferase
Probab=98.86 E-value=3.1e-06 Score=91.05 Aligned_cols=144 Identities=15% Similarity=0.095 Sum_probs=94.9
Q ss_pred HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCC---HHHH-----HHHHcCCCCCC
Q 036427 339 ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRN---KKLA-----NKLLSTDWKIP 410 (536)
Q Consensus 339 ~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~---~~l~-----~~l~~~~~~~~ 410 (536)
+..+.+.-.+...+|++..|+...-...+ +..++..+. ..+..++++.... .+.. +.+.+.-...+
T Consensus 272 ~cl~wLd~~~~~sVvyvsfGS~~~~~~~q-~~e~a~gl~-----~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g 345 (491)
T PLN02534 272 QCLEWLDSMKPRSVIYACLGSLCRLVPSQ-LIELGLGLE-----ASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRG 345 (491)
T ss_pred HHHHHHhcCCCCceEEEEecccccCCHHH-HHHHHHHHH-----hCCCCEEEEEecCccccchhhhcCchhhHHhhccCC
Confidence 34555555555678888888765333222 334445554 1234677766521 1111 11222212457
Q ss_pred EEEecChhhHHHHHhhcCe--EEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-Cceee-------------
Q 036427 411 VQVKGFVSKMEEAMGACDC--IITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKF------------- 474 (536)
Q Consensus 411 V~~~G~v~~l~~ll~~aDv--~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~------------- 474 (536)
+.+.+|+++ .+++..+++ +|+++|.++++||+++|+|+|+.|...+|.. |+..+++. +.|+-
T Consensus 346 ~~v~~w~pq-~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~-na~~~~e~~~vGv~~~~~~~~~~~~~~ 423 (491)
T PLN02534 346 LLIKGWAPQ-VLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFL-NEKLIVEVLRIGVRVGVEVPVRWGDEE 423 (491)
T ss_pred eeccCCCCH-HHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHH-HHHHHHHhhcceEEecccccccccccc
Confidence 888899976 678988887 9999999999999999999999999888765 77777633 33332
Q ss_pred ----cCCHHHHHHHHHHHhC
Q 036427 475 ----SKSPKEIANMVSQWFG 490 (536)
Q Consensus 475 ----~~d~~~La~~I~~ll~ 490 (536)
+-+.++++++|++++.
T Consensus 424 ~~~~~v~~eev~~~v~~~m~ 443 (491)
T PLN02534 424 RVGVLVKKDEVEKAVKTLMD 443 (491)
T ss_pred cccCccCHHHHHHHHHHHhc
Confidence 1267899999999995
No 136
>PLN02555 limonoid glucosyltransferase
Probab=98.86 E-value=6.4e-06 Score=88.43 Aligned_cols=145 Identities=14% Similarity=0.122 Sum_probs=97.7
Q ss_pred HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCC-----H---HHHHHHHcCCCCCC
Q 036427 339 ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRN-----K---KLANKLLSTDWKIP 410 (536)
Q Consensus 339 ~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~-----~---~l~~~l~~~~~~~~ 410 (536)
+..+.+.-.+...+|++..|+...-. .+.+..++..+. ..+.++|++.... . .+.+.+.+ ....+
T Consensus 266 ~~~~wLd~~~~~sVvyvsfGS~~~~~-~~q~~ela~~l~-----~~~~~flW~~~~~~~~~~~~~~~lp~~~~~-~~~~~ 338 (480)
T PLN02555 266 DCIEWLDSKPPSSVVYISFGTVVYLK-QEQIDEIAYGVL-----NSGVSFLWVMRPPHKDSGVEPHVLPEEFLE-KAGDK 338 (480)
T ss_pred hHHHHHhCCCCCceeEEEeccccCCC-HHHHHHHHHHHH-----hcCCeEEEEEecCcccccchhhcCChhhhh-hcCCc
Confidence 44455544444457777777654322 233444555553 2345677765421 0 01111111 13457
Q ss_pred EEEecChhhHHHHH--hhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC---------CH
Q 036427 411 VQVKGFVSKMEEAM--GACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK---------SP 478 (536)
Q Consensus 411 V~~~G~v~~l~~ll--~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~---------d~ 478 (536)
+.+.+|+++ .+++ .++.++|+++|.++++||+.+|+|+|+.|...+|.. |+..+++. |.|+.+. +.
T Consensus 339 g~v~~W~PQ-~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~-Na~~~~~~~gvGv~l~~~~~~~~~v~~ 416 (480)
T PLN02555 339 GKIVQWCPQ-EKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVT-DAVYLVDVFKTGVRLCRGEAENKLITR 416 (480)
T ss_pred eEEEecCCH-HHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHH-HHHHHHHHhCceEEccCCccccCcCcH
Confidence 888899976 5677 567889999999999999999999999999888875 88988887 8887761 57
Q ss_pred HHHHHHHHHHhCCCH
Q 036427 479 KEIANMVSQWFGPKI 493 (536)
Q Consensus 479 ~~La~~I~~ll~~d~ 493 (536)
+++.++|++++. ++
T Consensus 417 ~~v~~~v~~vm~-~~ 430 (480)
T PLN02555 417 EEVAECLLEATV-GE 430 (480)
T ss_pred HHHHHHHHHHhc-Cc
Confidence 899999999997 53
No 137
>PLN03004 UDP-glycosyltransferase
Probab=98.80 E-value=3.9e-07 Score=96.95 Aligned_cols=198 Identities=18% Similarity=0.139 Sum_probs=123.9
Q ss_pred cCCEEEEcCHHHHHH-HHHh---CCCCCCEEEeCCCCCCCC-CCC-CCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHH
Q 036427 294 LVTRCYCPTADVAKR-AMKA---GLQASQIKVYGLPVRPSF-VKP-VRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEA 367 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~-l~~~---g~~~~ki~vignpv~~~~-~~~-~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~ 367 (536)
.++.+++.|-+..+. +.++ .....++..+|.-+.... ... .....+..+.+.-.+...+|++..|+...-. .+
T Consensus 208 ~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~-~~ 286 (451)
T PLN03004 208 KSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFS-KE 286 (451)
T ss_pred ccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccCccccccccchhhHHHHHHHhCCCCceEEEEecccccCC-HH
Confidence 455666655444432 2221 111135777776542111 000 1111234455544445568888888764322 34
Q ss_pred HHHHHHHHhhhcccCCCCcEEEEEecCCH----------H-HHHHHHcCCCCCCEEEecChhhHHHHHhhcCe--EEECC
Q 036427 368 TARALGNALYDENLGEPIGQVLVICGRNK----------K-LANKLLSTDWKIPVQVKGFVSKMEEAMGACDC--IITKA 434 (536)
Q Consensus 368 ~l~al~~~l~~~~~~~~~~~~lvi~G~~~----------~-l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv--~V~~s 434 (536)
.+.+++..+.. .+..++++..... . +.+.+.+.-...++.+.+|+++ .++++++++ +|+++
T Consensus 287 q~~ela~gL~~-----s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ-~~iL~H~~v~~FvTH~ 360 (451)
T PLN03004 287 QVIEIAVGLEK-----SGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQ-VPVLNHKAVGGFVTHC 360 (451)
T ss_pred HHHHHHHHHHH-----CCCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCH-HHHhCCCccceEeccC
Confidence 45566666642 3346777765321 0 1111222222457888999976 579999998 99999
Q ss_pred ChHHHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeecC-------CHHHHHHHHHHHhCCCHHHHHHHH
Q 036427 435 GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFSK-------SPKEIANMVSQWFGPKIDELKAMS 500 (536)
Q Consensus 435 G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~~-------d~~~La~~I~~ll~~d~~~~~~m~ 500 (536)
|.++++||+++|+|+|+.|...+|.. |++.+++ .|.|..+. +.++++++|+++++ +++++++..
T Consensus 361 G~nS~lEal~~GVP~v~~P~~~DQ~~-na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~-~~~~r~~a~ 432 (451)
T PLN03004 361 GWNSILEAVCAGVPMVAWPLYAEQRF-NRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIG-ECPVRERTM 432 (451)
T ss_pred cchHHHHHHHcCCCEEeccccccchh-hHHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhc-CHHHHHHHH
Confidence 99999999999999999999888875 8888875 58887662 68999999999998 866554433
No 138
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=98.78 E-value=1.2e-06 Score=99.55 Aligned_cols=265 Identities=11% Similarity=0.106 Sum_probs=161.7
Q ss_pred HHhhCC-CEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC-CCC-----ccc--ccc---cccCCEEEEcCHHHHHHH
Q 036427 242 LMKYQP-DIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD-LST-----CHP--TWF---HKLVTRCYCPTADVAKRA 309 (536)
Q Consensus 242 l~~~kP-DvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~-----~~~--~~~---~~~~d~vi~~S~~~~~~l 309 (536)
.+..+| |+|.+|..-+..+|..+-++ + ++.++-.+.|- |.. +.+ ..+ .-.+|.|=..+....+.+
T Consensus 226 ~~~~~~gD~VWVHDYHL~LlP~~LR~~-~--p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhF 302 (934)
T PLN03064 226 NEHYEEGDVVWCHDYHLMFLPKCLKEY-N--SNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHF 302 (934)
T ss_pred HHhcCCCCEEEEecchhhHHHHHHHHh-C--CCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHH
Confidence 334555 68888877666666554443 2 23455444442 211 111 111 235678878888877776
Q ss_pred HH-----hCCCC--------C---CEEEeCCCCCCCCCCCCCc-------hHHHHHHcCCCCCCCEEEEecCCCCCCcHH
Q 036427 310 MK-----AGLQA--------S---QIKVYGLPVRPSFVKPVRP-------KVELRRELGMDEDLPAVLLMGGGEGMGPIE 366 (536)
Q Consensus 310 ~~-----~g~~~--------~---ki~vignpv~~~~~~~~~~-------~~~~r~~lgi~~~~~~il~~gg~~g~k~~~ 366 (536)
.. .|+.. . ++.+.+.++|+..+..... .++++++++ ++++|+.+++....|++.
T Consensus 303 l~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~---g~kiIlgVDRLD~~KGI~ 379 (934)
T PLN03064 303 VSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFA---GRKVMLGVDRLDMIKGIP 379 (934)
T ss_pred HHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhC---CceEEEEeeccccccCHH
Confidence 54 13221 1 2445667777765532211 124566654 466888888877788888
Q ss_pred HHHHHHHHHhhhcccCCCCcE--E-EEEe-----cCCHH---HHHHHHcC--------CC--CCCEEEecC-h--hhHHH
Q 036427 367 ATARALGNALYDENLGEPIGQ--V-LVIC-----GRNKK---LANKLLST--------DW--KIPVQVKGF-V--SKMEE 422 (536)
Q Consensus 367 ~~l~al~~~l~~~~~~~~~~~--~-lvi~-----G~~~~---l~~~l~~~--------~~--~~~V~~~G~-v--~~l~~ 422 (536)
..+.++..-+. .+|.++ + ++.+ +..++ +++++.+. +- -.+|+++.. + +++..
T Consensus 380 ~kL~AfE~fL~----~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~A 455 (934)
T PLN03064 380 QKILAFEKFLE----ENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCA 455 (934)
T ss_pred HHHHHHHHHHH----hCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHH
Confidence 88887766554 245543 2 2211 23232 23333221 10 123444432 2 58999
Q ss_pred HHhhcCeEEECC---C-hHHHHHHHHhCC----cEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCC
Q 036427 423 AMGACDCIITKA---G-PGTIAEAMIRGL----PIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPK 492 (536)
Q Consensus 423 ll~~aDv~V~~s---G-~~tllEAma~Gl----PVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d 492 (536)
+|+.||+++.+| | .++..|+|+|+. +.|++...+ .+..+ ...+++++ |.++++++|.+.|+|+
T Consensus 456 lY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaG-----aa~~L--~~~AllVNP~D~~~vA~AI~~AL~M~ 528 (934)
T PLN03064 456 LYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAG-----AAQSL--GAGAILVNPWNITEVAASIAQALNMP 528 (934)
T ss_pred HHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCc-----hHHHh--CCceEEECCCCHHHHHHHHHHHHhCC
Confidence 999999999998 6 899999999954 333454322 23223 22355665 9999999999999989
Q ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 036427 493 IDELKAMSQNALKLARPDAVFRIVQDLHELV 523 (536)
Q Consensus 493 ~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~ 523 (536)
++.++...++.++++..+.+.+.++.+++-+
T Consensus 529 ~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L 559 (934)
T PLN03064 529 EEEREKRHRHNFMHVTTHTAQEWAETFVSEL 559 (934)
T ss_pred HHHHHHHHHHHHhhcccCCHHHHHHHHHHHH
Confidence 9999999999999999998888888765433
No 139
>PLN02554 UDP-glycosyltransferase family protein
Probab=98.76 E-value=1.3e-06 Score=94.27 Aligned_cols=154 Identities=23% Similarity=0.184 Sum_probs=101.1
Q ss_pred HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---------------H-HHHHH
Q 036427 339 ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---------------K-LANKL 402 (536)
Q Consensus 339 ~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---------------~-l~~~l 402 (536)
++.+.+.-.+...+|++..|+...-. .+.+.+++..+.. .+.+++++..... + +.+.+
T Consensus 263 ~~~~wLd~~~~~svvyvsfGS~~~~~-~~~~~~la~~l~~-----~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~ 336 (481)
T PLN02554 263 EILRWLDEQPPKSVVFLCFGSMGGFS-EEQAREIAIALER-----SGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGF 336 (481)
T ss_pred HHHHHHhcCCCCcEEEEeccccccCC-HHHHHHHHHHHHH-----cCCCeEEEEcCCcccccccccccccchhhhCChHH
Confidence 45555543344557888888764322 3355666666642 3346766654310 0 01111
Q ss_pred HcCCCCCCEEEecChhhHHHHH--hhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhh-HhhCCceeec----
Q 036427 403 LSTDWKIPVQVKGFVSKMEEAM--GACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPY-VVENGCGKFS---- 475 (536)
Q Consensus 403 ~~~~~~~~V~~~G~v~~l~~ll--~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~-lv~~g~g~~~---- 475 (536)
.+. ...++.+.+|+++ .++| ..+.++|+++|.++++||+.+|+|+|+.|..++|.. |+.. +.+.|+|..+
T Consensus 337 ~~r-~~~~g~v~~W~PQ-~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~-Na~~~v~~~g~Gv~l~~~~ 413 (481)
T PLN02554 337 LDR-TKDIGKVIGWAPQ-VAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKF-NAFEMVEELGLAVEIRKYW 413 (481)
T ss_pred HHH-hccCceEEeeCCH-HHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchh-hHHHHHHHhCceEEeeccc
Confidence 110 2346777899875 5778 566679999999999999999999999999888875 7754 5667888654
Q ss_pred ---------C--CHHHHHHHHHHHhCCCHHHHHHHHH
Q 036427 476 ---------K--SPKEIANMVSQWFGPKIDELKAMSQ 501 (536)
Q Consensus 476 ---------~--d~~~La~~I~~ll~~d~~~~~~m~~ 501 (536)
. +.+++.++|+++++.+++++++..+
T Consensus 414 ~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~ 450 (481)
T PLN02554 414 RGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKE 450 (481)
T ss_pred cccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 1 6889999999999525666655443
No 140
>PLN02167 UDP-glycosyltransferase family protein
Probab=98.69 E-value=2.1e-06 Score=92.56 Aligned_cols=219 Identities=17% Similarity=0.104 Sum_probs=126.1
Q ss_pred ccCCEEEEcCHHHHHH-HHHh---CCC-CCCEEEeCCCCCCCC-CC-C--CCchHHHHHHcCCCCCCCEEEEecCCCCCC
Q 036427 293 KLVTRCYCPTADVAKR-AMKA---GLQ-ASQIKVYGLPVRPSF-VK-P--VRPKVELRRELGMDEDLPAVLLMGGGEGMG 363 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~-l~~~---g~~-~~ki~vignpv~~~~-~~-~--~~~~~~~r~~lgi~~~~~~il~~gg~~g~k 363 (536)
+.++.+++.|-+..+. +.++ ... -.++..+|.-..... .. . ..+.+++.+.+.-.+...+|++..|+...-
T Consensus 214 ~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~ 293 (475)
T PLN02167 214 PEAKGILVNSFTELEPNAFDYFSRLPENYPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSL 293 (475)
T ss_pred cccCEeeeccHHHHHHHHHHHHHhhcccCCeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccC
Confidence 3455677665554443 2221 100 125777775432111 00 0 112234555554444556888888876433
Q ss_pred cHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-H-------HHHHHHcCCCCCCEEEecChhhHHHHHhh--cCeEEEC
Q 036427 364 PIEATARALGNALYDENLGEPIGQVLVICGRNK-K-------LANKLLSTDWKIPVQVKGFVSKMEEAMGA--CDCIITK 433 (536)
Q Consensus 364 ~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~-------l~~~l~~~~~~~~V~~~G~v~~l~~ll~~--aDv~V~~ 433 (536)
. .+.+.+++..+. ..+.++|++.+... . +.+.+.+ ....+..+.+|+++ .+++++ ++++|++
T Consensus 294 ~-~~~~~ela~~l~-----~~~~~flw~~~~~~~~~~~~~~~lp~~~~e-r~~~rg~v~~w~PQ-~~iL~h~~vg~fvtH 365 (475)
T PLN02167 294 P-APQIKEIAQALE-----LVGCRFLWSIRTNPAEYASPYEPLPEGFMD-RVMGRGLVCGWAPQ-VEILAHKAIGGFVSH 365 (475)
T ss_pred C-HHHHHHHHHHHH-----hCCCcEEEEEecCcccccchhhhCChHHHH-HhccCeeeeccCCH-HHHhcCcccCeEEee
Confidence 3 233556666664 23456777665321 0 1111111 11234567789865 578877 5579999
Q ss_pred CChHHHHHHHHhCCcEEEeccCCccccCChhh-HhhCCceeecC-----------CHHHHHHHHHHHhCCCH-HHHHHH-
Q 036427 434 AGPGTIAEAMIRGLPIILNDFIAGQEAGNVPY-VVENGCGKFSK-----------SPKEIANMVSQWFGPKI-DELKAM- 499 (536)
Q Consensus 434 sG~~tllEAma~GlPVI~~~~~~~~e~~na~~-lv~~g~g~~~~-----------d~~~La~~I~~ll~~d~-~~~~~m- 499 (536)
+|.++++||+++|+|+|+.|...+|.. |+.. +.+.|+|..+. +.++++++|++++. ++ +.++++
T Consensus 366 ~G~nS~~Eal~~GvP~l~~P~~~DQ~~-na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~-~~~~~r~~a~ 443 (475)
T PLN02167 366 CGWNSVLESLWFGVPIATWPMYAEQQL-NAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMD-GEDVPRKKVK 443 (475)
T ss_pred CCcccHHHHHHcCCCEEeccccccchh-hHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhc-CCHHHHHHHH
Confidence 999999999999999999999988876 7765 45678886541 67899999999997 44 444433
Q ss_pred --HHHHHHhcCCc-hHHHHHHHHHH
Q 036427 500 --SQNALKLARPD-AVFRIVQDLHE 521 (536)
Q Consensus 500 --~~~a~~~a~~~-~~~~i~~~i~~ 521 (536)
++.+++...+. ++.+-.+.+.+
T Consensus 444 ~~~~~~~~av~~gGsS~~~l~~~v~ 468 (475)
T PLN02167 444 EIAEAARKAVMDGGSSFVAVKRFID 468 (475)
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 34444444443 34443344333
No 141
>PLN02207 UDP-glycosyltransferase
Probab=98.59 E-value=7e-06 Score=87.80 Aligned_cols=208 Identities=14% Similarity=0.052 Sum_probs=125.6
Q ss_pred ccCCEEEEcCHHHHHH-HHHhC--CC-CCCEEEeCCCCCCCCCCCC----CchHHHHHHcCCCCCCCEEEEecCCCCCCc
Q 036427 293 KLVTRCYCPTADVAKR-AMKAG--LQ-ASQIKVYGLPVRPSFVKPV----RPKVELRRELGMDEDLPAVLLMGGGEGMGP 364 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~-l~~~g--~~-~~ki~vignpv~~~~~~~~----~~~~~~r~~lgi~~~~~~il~~gg~~g~k~ 364 (536)
+.++.+++.|.+..+. ..++- .+ ..++..+|.-......... ...++..+.+.-.+...+|++..|+...-
T Consensus 210 ~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~- 288 (468)
T PLN02207 210 TKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRL- 288 (468)
T ss_pred ccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCC-
Confidence 3466777777666554 22211 01 1357777765321110000 11234555554444456888888875532
Q ss_pred HHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-----HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCe--EEECCChH
Q 036427 365 IEATARALGNALYDENLGEPIGQVLVICGRNK-----KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDC--IITKAGPG 437 (536)
Q Consensus 365 ~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-----~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv--~V~~sG~~ 437 (536)
..+.+.+++..+. ..+..++++..... .+.+.+.+ ....+..+.+|.++ .+++++..+ +|+++|.+
T Consensus 289 ~~~q~~ela~~l~-----~~~~~flW~~r~~~~~~~~~lp~~f~e-r~~~~g~i~~W~PQ-~~IL~H~~vg~FvTH~Gwn 361 (468)
T PLN02207 289 RGPLVKEIAHGLE-----LCQYRFLWSLRTEEVTNDDLLPEGFLD-RVSGRGMICGWSPQ-VEILAHKAVGGFVSHCGWN 361 (468)
T ss_pred CHHHHHHHHHHHH-----HCCCcEEEEEeCCCccccccCCHHHHh-hcCCCeEEEEeCCH-HHHhcccccceeeecCccc
Confidence 2445666666665 23346777665311 01111111 12356777899876 567877665 99999999
Q ss_pred HHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeec-----------CCHHHHHHHHHHHhCC-CHHHHHHHH---H
Q 036427 438 TIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFS-----------KSPKEIANMVSQWFGP-KIDELKAMS---Q 501 (536)
Q Consensus 438 tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~-----------~d~~~La~~I~~ll~~-d~~~~~~m~---~ 501 (536)
+++||+.+|+|+|+.|..++|.. |+..+++ .|.|.-+ -+.+++.++|+++++. ++++|+++. +
T Consensus 362 S~~Eai~~GVP~l~~P~~~DQ~~-Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~ 440 (468)
T PLN02207 362 SIVESLWFGVPIVTWPMYAEQQL-NAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQ 440 (468)
T ss_pred cHHHHHHcCCCEEecCccccchh-hHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 99999999999999999998875 8888776 6877622 1678999999999951 244444433 3
Q ss_pred HHHHhcCC
Q 036427 502 NALKLARP 509 (536)
Q Consensus 502 ~a~~~a~~ 509 (536)
.+++...+
T Consensus 441 ~a~~A~~~ 448 (468)
T PLN02207 441 MIQRATKN 448 (468)
T ss_pred HHHHHhcC
Confidence 34444344
No 142
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=98.57 E-value=1.5e-07 Score=84.71 Aligned_cols=145 Identities=13% Similarity=0.125 Sum_probs=74.3
Q ss_pred chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccchhhhhhhHHHH
Q 036427 156 GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIA 235 (536)
Q Consensus 156 gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (536)
||..+.+..|+++|.++ |++|.++.......... .. ....+......... ... . ......
T Consensus 1 GG~~~~~~~l~~~L~~~---G~~V~v~~~~~~~~~~~---~~------~~~~~~~~~~~~~~-~~~----~---~~~~~~ 60 (160)
T PF13579_consen 1 GGIERYVRELARALAAR---GHEVTVVTPQPDPEDDE---EE------EDGVRVHRLPLPRR-PWP----L---RLLRFL 60 (160)
T ss_dssp SHHHHHHHHHHHHHHHT---T-EEEEEEE---GGG-S---EE------ETTEEEEEE--S-S-SSG----G---GHCCHH
T ss_pred CCHHHHHHHHHHHHHHC---CCEEEEEecCCCCcccc---cc------cCCceEEeccCCcc-chh----h---hhHHHH
Confidence 69999999999999999 78887765322211000 00 00001111111100 000 0 011123
Q ss_pred HHHHHHH--HhhCCCEEEEcCcccchHHHHHHH-HcCCCCCceEEEEecCCCCcc------------cccccccCCEEEE
Q 036427 236 REVAKGL--MKYQPDIIISVHPLMQHVPLRILR-AKGLLKKIVFTTVITDLSTCH------------PTWFHKLVTRCYC 300 (536)
Q Consensus 236 ~~l~~~l--~~~kPDvVi~~~~~~~~i~~~~~~-~~g~~~~ip~v~~~~d~~~~~------------~~~~~~~~d~vi~ 300 (536)
..+.+++ ++.+||+||++.+.. .....+++ ..+ +|++...++..... .++..+.+|.+++
T Consensus 61 ~~~~~~l~~~~~~~Dvv~~~~~~~-~~~~~~~~~~~~----~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~ 135 (160)
T PF13579_consen 61 RRLRRLLAARRERPDVVHAHSPTA-GLVAALARRRRG----IPLVVTVHGTLFRRGSRWKRRLYRWLERRLLRRADRVIV 135 (160)
T ss_dssp HHHHHHCHHCT---SEEEEEHHHH-HHHHHHHHHHHT------EEEE-SS-T------HHHHHHHHHHHHHHHH-SEEEE
T ss_pred HHHHHHHhhhccCCeEEEecccch-hHHHHHHHHccC----CcEEEEECCCchhhccchhhHHHHHHHHHHHhcCCEEEE
Confidence 4666677 788999999988542 22233344 444 89987777643110 1345678999999
Q ss_pred cCHHHHHHHHHhCCCCCCEEEeCCC
Q 036427 301 PTADVAKRAMKAGLQASQIKVYGLP 325 (536)
Q Consensus 301 ~S~~~~~~l~~~g~~~~ki~vignp 325 (536)
+|+..++.+.++|++++++.+++||
T Consensus 136 ~S~~~~~~l~~~g~~~~ri~vipnG 160 (160)
T PF13579_consen 136 VSEAMRRYLRRYGVPPDRIHVIPNG 160 (160)
T ss_dssp SSHHHHHHHHHH---GGGEEE----
T ss_pred CCHHHHHHHHHhCCCCCcEEEeCcC
Confidence 9999999999999999999999986
No 143
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.56 E-value=2.3e-05 Score=75.00 Aligned_cols=257 Identities=20% Similarity=0.223 Sum_probs=134.6
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||+.+..+- .|..+.|..||+.|.+. .+.+.+.... . +.+.+..|-..|..
T Consensus 1 ~ki~aisD~R-tGnt~QaiaLa~~l~r~---eyttk~l~~~-~---------------l~~lP~~wl~~yp~-------- 52 (329)
T COG3660 1 MKIWAISDGR-TGNTHQAIALAEQLTRS---EYTTKLLEYN-N---------------LAKLPNFWLAYYPI-------- 52 (329)
T ss_pred CceEEeecCC-CccHHHHHHHHHHhhcc---ceEEEEeecc-c---------------cccCchhhhhcCcc--------
Confidence 7999999886 69999999999999875 5666554321 0 11111111111100
Q ss_pred hhhhhhhHHHHHHHHH-H---HHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEE
Q 036427 225 SNFAATSTFIAREVAK-G---LMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYC 300 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~-~---l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~ 300 (536)
...+++.. . ..+..||++|+.+-........+.++.| . +.+..+.| ++.-....|.+++
T Consensus 53 --------~~~~~l~~~~~~r~p~~~Pdl~I~aGrrta~l~~~lkk~~~---~-~~vVqI~~-----Prlp~~~fDlviv 115 (329)
T COG3660 53 --------HILRELFGPRLSRKPEQRPDLIITAGRRTAPLAFYLKKKFG---G-IKVVQIQD-----PRLPYNHFDLVIV 115 (329)
T ss_pred --------HhHHHhhcCccccCccCCCceEEecccchhHHHHHHHHhcC---C-ceEEEeeC-----CCCCcccceEEec
Confidence 00011111 1 1245699999998665443344444444 2 33334433 2233566899998
Q ss_pred cCHHHHHHHHHhCCCCCCEE-EeCCC--CCCCCCCCCCchHHHHHHcCCCCCCCEE-EEecCCCCCCcH-HHHHHHHHHH
Q 036427 301 PTADVAKRAMKAGLQASQIK-VYGLP--VRPSFVKPVRPKVELRRELGMDEDLPAV-LLMGGGEGMGPI-EATARALGNA 375 (536)
Q Consensus 301 ~S~~~~~~l~~~g~~~~ki~-vignp--v~~~~~~~~~~~~~~r~~lgi~~~~~~i-l~~gg~~g~k~~-~~~l~al~~~ 375 (536)
+-.+..+.... .-.++. +.|.+ +.+.+.. ..+ +..++++ +..++++ +++||..+.-.+ ++-...+...
T Consensus 116 p~HD~~~~~s~---~~~Nilpi~Gs~h~Vt~~~lA--a~~-e~~~~~~-p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~ 188 (329)
T COG3660 116 PYHDWREELSD---QGPNILPINGSPHNVTSQRLA--ALR-EAFKHLL-PLPRQRVAVLVGGNNKAFVFQEDKAHQFASL 188 (329)
T ss_pred cchhhhhhhhc---cCCceeeccCCCCcccHHHhh--hhH-HHHHhhC-CCCCceEEEEecCCCCCCccCHHHHHHHHHH
Confidence 87776654221 223343 33322 2222211 112 3334443 4444444 567776554333 2333333333
Q ss_pred hhhcccCCCCcEEEEEecCC-H-HHHHHHHcC-CCCCCEEEecCh---hhHHHHHhhcCeEEECCC-hHHHHHHHHhCCc
Q 036427 376 LYDENLGEPIGQVLVICGRN-K-KLANKLLST-DWKIPVQVKGFV---SKMEEAMGACDCIITKAG-PGTIAEAMIRGLP 448 (536)
Q Consensus 376 l~~~~~~~~~~~~lvi~G~~-~-~l~~~l~~~-~~~~~V~~~G~v---~~l~~ll~~aDv~V~~sG-~~tllEAma~GlP 448 (536)
+.+. +.+.++.+++-.... + ..+..++.. .-..-+.+-+.- +-..++|++||.+|...- -..+.||++.|+|
T Consensus 189 l~k~-l~~~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~TaDSinM~sEAasTgkP 267 (329)
T COG3660 189 LVKI-LENQGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTADSINMCSEAASTGKP 267 (329)
T ss_pred HHHH-HHhCCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEecchhhhhHHHhccCCC
Confidence 3221 124566666654443 3 445555542 222223333221 246789999999998874 4556799999999
Q ss_pred EEEecc
Q 036427 449 IILNDF 454 (536)
Q Consensus 449 VI~~~~ 454 (536)
|-+.-.
T Consensus 268 v~~~~~ 273 (329)
T COG3660 268 VFILEP 273 (329)
T ss_pred eEEEec
Confidence 998764
No 144
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=98.50 E-value=9.1e-06 Score=86.18 Aligned_cols=188 Identities=9% Similarity=0.015 Sum_probs=115.6
Q ss_pred ccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHH
Q 036427 293 KLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARAL 372 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al 372 (536)
...|.++++++...+.+.+..-+..++.+++-+.- +.... .+ .....+++++- ...++++
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~~~~~~~ip~g~i---~~~~~-~~---------r~~~~~l~~t~-------s~~I~~i 297 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDNEYQEQISQLGYL---YPFKK-DN---------KYRKQALILTN-------SDQIEHL 297 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCcccCceEEEEEEE---Eeecc-cc---------CCcccEEEECC-------HHHHHHH
Confidence 56788999998877776654322344443333322 11100 00 11223444431 3444445
Q ss_pred HHHhhhcccCCCCcEEEEEecCC--HHHHHHHHcCCCCCCEEEecChh-hHHHHHhhcCeEEECC---C-hHHHHHHHHh
Q 036427 373 GNALYDENLGEPIGQVLVICGRN--KKLANKLLSTDWKIPVQVKGFVS-KMEEAMGACDCIITKA---G-PGTIAEAMIR 445 (536)
Q Consensus 373 ~~~l~~~~~~~~~~~~lvi~G~~--~~l~~~l~~~~~~~~V~~~G~v~-~l~~ll~~aDv~V~~s---G-~~tllEAma~ 445 (536)
....+ .-|++++=+.++.. +++.+. .++ ..-+.+.|+.. ++.++|..||+++..+ | ++++.||+..
T Consensus 298 ~~Lv~----~lPd~~f~Iga~te~s~kL~~L-~~y--~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~ 370 (438)
T TIGR02919 298 EEIVQ----ALPDYHFHIAALTEMSSKLMSL-DKY--DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEY 370 (438)
T ss_pred HHHHH----hCCCcEEEEEecCcccHHHHHH-Hhc--CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHc
Confidence 44443 24788764444443 334333 443 44566677776 9999999999999877 3 8999999999
Q ss_pred CCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHH
Q 036427 446 GLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVF 513 (536)
Q Consensus 446 GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~ 513 (536)
|+|+|+.+...+... ++..|.-+-..++++++++|..+|+ +++..++.-..-++.|..-+.+
T Consensus 371 G~pI~afd~t~~~~~-----~i~~g~l~~~~~~~~m~~~i~~lL~-d~~~~~~~~~~q~~~a~~~~~~ 432 (438)
T TIGR02919 371 NLLILGFEETAHNRD-----FIASENIFEHNEVDQLISKLKDLLN-DPNQFRELLEQQREHANDISKE 432 (438)
T ss_pred CCcEEEEecccCCcc-----cccCCceecCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHhccCCHH
Confidence 999999997654332 3333322223499999999999999 9987776666666666554444
No 145
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=98.48 E-value=2.7e-07 Score=76.06 Aligned_cols=79 Identities=22% Similarity=0.238 Sum_probs=65.9
Q ss_pred hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCC-ceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC-CchHH
Q 036427 436 PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENG-CGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLAR-PDAVF 513 (536)
Q Consensus 436 ~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g-~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~-~~~~~ 513 (536)
...++|+|+||+|+|..+..+ ...+...| .+..++|++++.+++..+++ ||+.+++++++|++++. .++++
T Consensus 12 ~~r~~E~~a~G~~vi~~~~~~------~~~~~~~~~~~~~~~~~~el~~~i~~ll~-~~~~~~~ia~~a~~~v~~~~t~~ 84 (92)
T PF13524_consen 12 NMRIFEAMACGTPVISDDSPG------LREIFEDGEHIITYNDPEELAEKIEYLLE-NPEERRRIAKNARERVLKRHTWE 84 (92)
T ss_pred chHHHHHHHCCCeEEECChHH------HHHHcCCCCeEEEECCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHhCCHH
Confidence 679999999999999987522 23345555 56667899999999999999 99999999999999886 68999
Q ss_pred HHHHHHHH
Q 036427 514 RIVQDLHE 521 (536)
Q Consensus 514 ~i~~~i~~ 521 (536)
+.+++|++
T Consensus 85 ~~~~~il~ 92 (92)
T PF13524_consen 85 HRAEQILE 92 (92)
T ss_pred HHHHHHHC
Confidence 98888763
No 146
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.47 E-value=2.1e-06 Score=90.49 Aligned_cols=179 Identities=13% Similarity=0.086 Sum_probs=111.1
Q ss_pred HHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCC-CCEEEec
Q 036427 340 LRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWK-IPVQVKG 415 (536)
Q Consensus 340 ~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~-~~V~~~G 415 (536)
.|+.||++++..++..+ . ...|-..+.+....+.++. -|+.++++...... .+.+.+.+.++. +++.|.+
T Consensus 275 ~R~~~gLp~d~vvF~~f-n-~~~KI~p~~l~~W~~IL~~----vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~ 348 (468)
T PF13844_consen 275 TRAQYGLPEDAVVFGSF-N-NLFKISPETLDLWARILKA----VPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSP 348 (468)
T ss_dssp ETGGGT--SSSEEEEE--S--GGG--HHHHHHHHHHHHH----STTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE
T ss_pred CHHHcCCCCCceEEEec-C-ccccCCHHHHHHHHHHHHh----CCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcC
Confidence 36789999886433332 2 2234445666666666653 47777655543322 355566666654 6799988
Q ss_pred Chh--hHHHHHhhcCeEEECC---ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHh
Q 036427 416 FVS--KMEEAMGACDCIITKA---GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWF 489 (536)
Q Consensus 416 ~v~--~l~~ll~~aDv~V~~s---G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll 489 (536)
..+ +.-..++.+|+++=+. |+.|.+||+.+|+|||..+.........+..+...|+.-++ .|.++..+...+|-
T Consensus 349 ~~~~~ehl~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~s~~eYv~~Av~La 428 (468)
T PF13844_consen 349 VAPREEHLRRYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIADSEEEYVEIAVRLA 428 (468)
T ss_dssp ---HHHHHHHGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-SSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCCCHHHHHHHHHHHh
Confidence 753 4455678899988542 78999999999999999996655555566777788876655 58999999988999
Q ss_pred CCCHHHHHHHHHHHHHhc---CCchHHHHHHHHHHHHhh
Q 036427 490 GPKIDELKAMSQNALKLA---RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 490 ~~d~~~~~~m~~~a~~~a---~~~~~~~i~~~i~~l~~~ 525 (536)
+ |++.++++++.-++.. .-+...+.++.+++.+++
T Consensus 429 ~-D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 429 T-DPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp H--HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 9 9999999998876532 236777888888887753
No 147
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=98.43 E-value=0.00024 Score=75.21 Aligned_cols=268 Identities=12% Similarity=0.065 Sum_probs=144.1
Q ss_pred HHHHHHHhhCCCEEEEcCcccc--hHHHHHHHHcCCCCCceE-EEEec-CCCCcccccccccCCEEEEcCHHHHHHHHHh
Q 036427 237 EVAKGLMKYQPDIIISVHPLMQ--HVPLRILRAKGLLKKIVF-TTVIT-DLSTCHPTWFHKLVTRCYCPTADVAKRAMKA 312 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~~~~~--~i~~~~~~~~g~~~~ip~-v~~~~-d~~~~~~~~~~~~~d~vi~~S~~~~~~l~~~ 312 (536)
...+-|+....||.+-...... ..+.+++|- -|+ |++.. +...-.+..-+-.+|.++++ +....++.+.
T Consensus 326 e~a~~I~~d~IdILvDl~g~T~d~r~~v~A~Rp------APiqvswlGy~aT~g~p~~DY~I~D~y~vP-p~ae~yysEk 398 (620)
T COG3914 326 EIANAIRTDGIDILVDLDGHTVDTRCQVFAHRP------APIQVSWLGYPATTGSPNMDYFISDPYTVP-PTAEEYYSEK 398 (620)
T ss_pred HHHHHHHhcCCeEEEeccCceeccchhhhhcCC------CceEEeecccccccCCCcceEEeeCceecC-chHHHHHHHH
Confidence 5566788889999986544322 112333321 343 23322 11111111112345555555 5555555443
Q ss_pred CCCCCCEEEeCCCCCCCCC-CCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEE
Q 036427 313 GLQASQIKVYGLPVRPSFV-KPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVI 391 (536)
Q Consensus 313 g~~~~ki~vignpv~~~~~-~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi 391 (536)
-+. +-.++-|+|-... .+. --|..+||+++..++++. .-..|...+.++.-.+.++. -|+-.+++.
T Consensus 399 l~R---Lp~cy~p~d~~~~v~p~----~sR~~lglp~~avVf~c~--~n~~K~~pev~~~wmqIL~~----vP~Svl~L~ 465 (620)
T COG3914 399 LWR---LPQCYQPVDGFEPVTPP----PSRAQLGLPEDAVVFCCF--NNYFKITPEVFALWMQILSA----VPNSVLLLK 465 (620)
T ss_pred HHh---cccccCCCCCcccCCCC----cchhhcCCCCCeEEEEec--CCcccCCHHHHHHHHHHHHh----CCCcEEEEe
Confidence 111 1134445543321 111 125678999875444333 33345556666666666653 366655444
Q ss_pred ec-CCHHH----HHHHHcCCC-CCCEEEecCh--hhHHHHHhhcCeEEECC---ChHHHHHHHHhCCcEEEeccCCcccc
Q 036427 392 CG-RNKKL----ANKLLSTDW-KIPVQVKGFV--SKMEEAMGACDCIITKA---GPGTIAEAMIRGLPIILNDFIAGQEA 460 (536)
Q Consensus 392 ~G-~~~~l----~~~l~~~~~-~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G~~tllEAma~GlPVI~~~~~~~~e~ 460 (536)
.| ..++. ++..++.+. .+++.|.+.. ++..+.|..||+++=.- |..|.+||+-+|+|||.-....-...
T Consensus 466 ~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~~G~~FasR 545 (620)
T COG3914 466 AGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLVLDTYPYGGHTTASDALWMGVPVLTRVGEQFASR 545 (620)
T ss_pred cCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhheeeecccCCCccchHHHHHhcCceeeeccHHHHHh
Confidence 44 23333 334444453 4689998876 47788899999988542 57899999999999999763222222
Q ss_pred CChhhHhhCCceeec-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc---CCchHHHHHHHHHHHHhh
Q 036427 461 GNVPYVVENGCGKFS-KSPKEIANMVSQWFGPKIDELKAMSQNALKLA---RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 461 ~na~~lv~~g~g~~~-~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a---~~~~~~~i~~~i~~l~~~ 525 (536)
.....+...|..-++ .+.++..++--.+=. |...+++.+..-.+.. .-+.....++++++++.+
T Consensus 546 ~~~si~~~agi~e~vA~s~~dYV~~av~~g~-dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~ 613 (620)
T COG3914 546 NGASIATNAGIPELVADSRADYVEKAVAFGS-DRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWG 613 (620)
T ss_pred hhHHHHHhcCCchhhcCCHHHHHHHHHHhcc-cHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHH
Confidence 234445555654433 355555444445545 6666665554332211 125667788888777654
No 148
>PLN03015 UDP-glucosyl transferase
Probab=98.42 E-value=1.4e-05 Score=85.33 Aligned_cols=188 Identities=16% Similarity=0.184 Sum_probs=115.4
Q ss_pred ccCCEEEEcCHHHHHH-HHHh---C--CC---CCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCC
Q 036427 293 KLVTRCYCPTADVAKR-AMKA---G--LQ---ASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMG 363 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~-l~~~---g--~~---~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k 363 (536)
+.++.+++.|-+..+. +.++ . .. ..++..+|+-+..... ..+.++..+.+.-.+...++++..|+...-
T Consensus 203 ~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~~~--~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~ 280 (470)
T PLN03015 203 PMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTNVH--VEKRNSIFEWLDKQGERSVVYVCLGSGGTL 280 (470)
T ss_pred ccCCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCCCccc--ccchHHHHHHHHhCCCCCEEEEECCcCCcC
Confidence 3566777766555443 2221 1 00 1247777765532211 112234556665555567888888887543
Q ss_pred cHHHHHHHHHHHhhhcccCCCCcEEEEEecCC-----------HHHH----HHHHcCCCCCCEEEecChhhHHHHHhhcC
Q 036427 364 PIEATARALGNALYDENLGEPIGQVLVICGRN-----------KKLA----NKLLSTDWKIPVQVKGFVSKMEEAMGACD 428 (536)
Q Consensus 364 ~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~-----------~~l~----~~l~~~~~~~~V~~~G~v~~l~~ll~~aD 428 (536)
. .+.+.+++..+.. .+..++++.... +... +.+.+.-....+.+.+|.++ .+++++..
T Consensus 281 ~-~~q~~ela~gl~~-----s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ-~~vL~h~~ 353 (470)
T PLN03015 281 T-FEQTVELAWGLEL-----SGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQ-VEILSHRS 353 (470)
T ss_pred C-HHHHHHHHHHHHh-----CCCcEEEEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCH-HHHhccCc
Confidence 3 3445666666652 334677765311 0011 11111111123667799876 46777765
Q ss_pred e--EEECCChHHHHHHHHhCCcEEEeccCCccccCChhhH-hhCCceeecC--------CHHHHHHHHHHHhC
Q 036427 429 C--IITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYV-VENGCGKFSK--------SPKEIANMVSQWFG 490 (536)
Q Consensus 429 v--~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~l-v~~g~g~~~~--------d~~~La~~I~~ll~ 490 (536)
+ +|+++|.++++||+.+|+|+|+.|...+|.. |+..+ ...|+|..+. +.++++++|+++++
T Consensus 354 vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~-na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~ 425 (470)
T PLN03015 354 IGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWM-NATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVA 425 (470)
T ss_pred cCeEEecCCchhHHHHHHcCCCEEecccccchHH-HHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHc
Confidence 4 9999999999999999999999999888875 88877 4567776551 67899999999994
No 149
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=98.41 E-value=9.8e-05 Score=76.47 Aligned_cols=274 Identities=12% Similarity=0.064 Sum_probs=130.1
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||||+-.+. -|..-.+..+.++|++.+| +.+|.++.... ...+.+..|.....+........
T Consensus 1 mrILii~~~~-iGD~il~tP~l~~Lk~~~P-~a~I~~l~~~~-------------~~~l~~~~P~vd~vi~~~~~~~~-- 63 (348)
T PRK10916 1 MKILVIGPSW-VGDMMMSQSLYRTLKARYP-QAIIDVMAPAW-------------CRPLLSRMPEVNEAIPMPLGHGA-- 63 (348)
T ss_pred CcEEEEccCc-ccHHHhHHHHHHHHHHHCC-CCeEEEEechh-------------hHHHHhcCCccCEEEecccccch--
Confidence 6899997654 4999999999999999988 56664443211 11123333322222211111000
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceE-EEEecCCCC-cccccccccCCEEEEcC
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVF-TTVITDLST-CHPTWFHKLVTRCYCPT 302 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~-v~~~~d~~~-~~~~~~~~~~d~vi~~S 302 (536)
.......++.+.|++.++|+++........ ..+....| ++. +.+...... ....+ +..+.. ..
T Consensus 64 -----~~~~~~~~l~~~lr~~~yD~vidl~~~~~s--~~l~~~~~----~~~rig~~~~~~~~~~~~~--~~~~~~--~~ 128 (348)
T PRK10916 64 -----LEIGERRRLGHSLREKRYDRAYVLPNSFKS--ALVPFFAG----IPHRTGWRGEMRYGLLNDL--RVLDKE--AF 128 (348)
T ss_pred -----hhhHHHHHHHHHHHhcCCCEEEECCCcHHH--HHHHHHcC----CCeEeecccCccccccccc--cccCcc--cC
Confidence 011122356677899999999987654321 22333334 222 111111000 00000 000110 01
Q ss_pred HHHHHHHHHhCCCCC---CEEEeCCCC-CCCCCCCCCchHHHHHHcCCCCCCCEEEEe-cCCC-CCCc-HHHHHHHHHHH
Q 036427 303 ADVAKRAMKAGLQAS---QIKVYGLPV-RPSFVKPVRPKVELRRELGMDEDLPAVLLM-GGGE-GMGP-IEATARALGNA 375 (536)
Q Consensus 303 ~~~~~~l~~~g~~~~---ki~vignpv-~~~~~~~~~~~~~~r~~lgi~~~~~~il~~-gg~~-g~k~-~~~~l~al~~~ 375 (536)
....+.+.....+.. ...-+..+. .+.........+.....+++..++++|++. |++. ..|. ..+.+.++++.
T Consensus 129 ~h~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~ 208 (348)
T PRK10916 129 PLMVERYVALAYDKGVMRTAADLPQPLLWPQLQVSEGEKSETCAAFSLSSERPIIGFCPGAEFGPAKRWPHYHYAELAQQ 208 (348)
T ss_pred cHHHHHHHHHhcccccccccccCCCCcCCCccccCHHHHHHHHHHcCCCCCCCEEEEeCCCCCccccCCCHHHHHHHHHH
Confidence 122222222110000 000000010 111111111122344455555455666544 4433 2343 34566677766
Q ss_pred hhhcccCCCCcEEEEEecCCH-HHHHHHHcC-CC--CCC-EEEecCh--hhHHHHHhhcCeEEEC-CChHHHHHHHHhCC
Q 036427 376 LYDENLGEPIGQVLVICGRNK-KLANKLLST-DW--KIP-VQVKGFV--SKMEEAMGACDCIITK-AGPGTIAEAMIRGL 447 (536)
Q Consensus 376 l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~-~~--~~~-V~~~G~v--~~l~~ll~~aDv~V~~-sG~~tllEAma~Gl 447 (536)
+. ..+.++++++|..+ +..+.+.+. .. ..+ +.+.|.. .++..+++.||++|+. ||++ .=|.|.|+
T Consensus 209 l~-----~~~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~ali~~a~l~I~nDTGp~--HlAaA~g~ 281 (348)
T PRK10916 209 LI-----DEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLEQAVILIAACKAIVTNDSGLM--HVAAALNR 281 (348)
T ss_pred HH-----HCCCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCCCCHHHHHHHHHhCCEEEecCChHH--HHHHHhCC
Confidence 64 23566666655443 223333322 11 111 4556654 6999999999999987 4654 44999999
Q ss_pred cEEEeccCCc
Q 036427 448 PIILNDFIAG 457 (536)
Q Consensus 448 PVI~~~~~~~ 457 (536)
|+|+.=.+.+
T Consensus 282 P~valfGpt~ 291 (348)
T PRK10916 282 PLVALYGPSS 291 (348)
T ss_pred CEEEEECCCC
Confidence 9998765443
No 150
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=98.32 E-value=7.3e-06 Score=85.58 Aligned_cols=221 Identities=16% Similarity=0.127 Sum_probs=121.3
Q ss_pred ccccCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCC-chHHHHHHcCCCCCCCEEEEecCCCCCCcH---
Q 036427 291 FHKLVTRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVR-PKVELRRELGMDEDLPAVLLMGGGEGMGPI--- 365 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~-~~~~~r~~lgi~~~~~~il~~gg~~g~k~~--- 365 (536)
..+..|.+++.|+...+.+.+ .+.+.+++.++|.|-.+..+.... ..+.+++.++++.++++||++.........
T Consensus 131 ~~~~~d~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~ 210 (369)
T PF04464_consen 131 NYRNYDYFIVSSEFEKEIFKKAFGYPEDKILVTGYPRNDYLFNKSKENRNRIKKKLGIDKDKKVILYAPTWRDNSSNEYF 210 (369)
T ss_dssp HHTT-SEEEESSHHHHHHHHHHTT--GGGEEES--GGGHHHHHSTT-HHHHHHHHTT--SS-EEEEEE----GGG--GGS
T ss_pred hccCCcEEEECCHHHHHHHHHHhccCcceEEEeCCCeEhHHhccCHHHHHHHHHHhccCCCCcEEEEeeccccccccccc
Confidence 356788999999999988877 478888999999986655443332 246788889999988888887542221111
Q ss_pred -----HHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHc-CCCCCCEEEecChhhHHHHHhhcCeEEECCChHHH
Q 036427 366 -----EATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLS-TDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTI 439 (536)
Q Consensus 366 -----~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~-~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tl 439 (536)
......+. .+. ..++. ++.-.++........ .....+|.+...-.++.++|..||++|+-- +.++
T Consensus 211 ~~~~~~~~~~~l~-~~~-----~~~~~--li~k~Hp~~~~~~~~~~~~~~~i~~~~~~~~~~~ll~~aDiLITDy-SSi~ 281 (369)
T PF04464_consen 211 KFFFSDLDFEKLN-FLL-----KNNYV--LIIKPHPNMKKKFKDFKEDNSNIIFVSDNEDIYDLLAAADILITDY-SSII 281 (369)
T ss_dssp S----TT-HHHHH-HHH-----TTTEE--EEE--SHHHHTT----TT-TTTEEE-TT-S-HHHHHHT-SEEEESS--THH
T ss_pred cccccccCHHHHH-HHh-----CCCcE--EEEEeCchhhhchhhhhccCCcEEECCCCCCHHHHHHhcCEEEEec-hhHH
Confidence 11223333 221 34443 333445543333332 334567888777678999999999999863 3488
Q ss_pred HHHHHhCCcEEEeccCCc---cccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHH-HHHHHHH---hcCCchH
Q 036427 440 AEAMIRGLPIILNDFIAG---QEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKA-MSQNALK---LARPDAV 512 (536)
Q Consensus 440 lEAma~GlPVI~~~~~~~---~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~-m~~~a~~---~a~~~~~ 512 (536)
.|++.+++|||.....-. .+.+--....+..-|..+.+.++|.++|+.+++ +++..++ ..+...+ .....++
T Consensus 282 fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~~~~~eL~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~Dg~s~ 360 (369)
T PF04464_consen 282 FDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIVYNFEELIEAIENIIE-NPDEYKEKREKFRDKFFKYNDGNSS 360 (369)
T ss_dssp HHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EESSHHHHHHHHTTHHH-HHHHTHHHHHHHHHHHSTT--S-HH
T ss_pred HHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCceeCCHHHHHHHHHhhhh-CCHHHHHHHHHHHHHhCCCCCchHH
Confidence 999999999998765322 111111112334446667799999999999887 5543322 2222223 3455788
Q ss_pred HHHHHHHHH
Q 036427 513 FRIVQDLHE 521 (536)
Q Consensus 513 ~~i~~~i~~ 521 (536)
++|++.|..
T Consensus 361 eri~~~I~k 369 (369)
T PF04464_consen 361 ERIVNYIFK 369 (369)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhC
Confidence 999888753
No 151
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=98.30 E-value=0.00027 Score=72.75 Aligned_cols=270 Identities=12% Similarity=0.062 Sum_probs=130.5
Q ss_pred eEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccch
Q 036427 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQS 225 (536)
Q Consensus 146 KIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~ 225 (536)
||||+-.+. -|..-.+..+.++|++.+| +.+|.++.... ...+.+..|.....+........
T Consensus 1 rILii~~~~-iGD~i~~~p~l~~Lk~~~P-~a~I~~l~~~~-------------~~~l~~~~p~id~v~~~~~~~~~--- 62 (334)
T TIGR02195 1 KILVIGPSW-VGDMVMAQSLYRLLKKRYP-QAVIDVLAPAW-------------CRPLLERMPEIRQAIDMPLGHGA--- 62 (334)
T ss_pred CEEEEccch-hHHHHHHHHHHHHHHHHCC-CCEEEEEechh-------------hHHHHhcCchhceeeecCCcccc---
Confidence 688887654 5999999999999999998 46665443211 11122322322222211110000
Q ss_pred hhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceE-EEEecCCCCcccccccccC--CEEEEcC
Q 036427 226 NFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVF-TTVITDLSTCHPTWFHKLV--TRCYCPT 302 (536)
Q Consensus 226 ~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~-v~~~~d~~~~~~~~~~~~~--d~vi~~S 302 (536)
.......++.+.+++.++|+++........ ..+....+ ++. +-+..... ..++.... ... ..
T Consensus 63 ----~~~~~~~~~~~~lr~~~yD~vi~l~~~~~s--~ll~~~~~----~~~riG~~~~~~---~~~~~~~~~~~~~--~~ 127 (334)
T TIGR02195 63 ----LELTERRRLGRSLREERYDQAIVLPNSLKS--ALIPFFAG----IPHRTGWRGEMR---YGLLNDVRALDKE--RL 127 (334)
T ss_pred ----hhhhHHHHHHHHHhhcCCCEEEECCCCHHH--HHHHHHcC----CCceeeecCCCc---ceecccCcCCCcc--cc
Confidence 011122356677888999999987654321 22233333 222 11111110 00000000 000 01
Q ss_pred HHHHHHHHHhCCCCCCEEEeCCC-CCCCCCCCCCchHHHHHHcCCCCCCCEEEEec-CCC-CCCc-HHHHHHHHHHHhhh
Q 036427 303 ADVAKRAMKAGLQASQIKVYGLP-VRPSFVKPVRPKVELRRELGMDEDLPAVLLMG-GGE-GMGP-IEATARALGNALYD 378 (536)
Q Consensus 303 ~~~~~~l~~~g~~~~ki~vignp-v~~~~~~~~~~~~~~r~~lgi~~~~~~il~~g-g~~-g~k~-~~~~l~al~~~l~~ 378 (536)
....+.+.....+.. .. +... ..+.........+.+..+++++.++++|++.. ++. ..+. ..+.+.++++.+.
T Consensus 128 ~h~~~~~~~l~~~~~-~~-~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~- 204 (334)
T TIGR02195 128 PLMVERYIALAYDKG-QD-LPQPLPRPQLQVSPAEQAAALAKFGLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLI- 204 (334)
T ss_pred cHHHHHHHHHhcccc-CC-CCCCCCCCcccCCHHHHHHHHHHcCCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHH-
Confidence 122233222211100 00 0000 11111111112234456677766666665544 433 2333 3456666766664
Q ss_pred cccCCCCcEEEEEecCCH-HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC-ChHHHHHHHHhCCcEEEecc
Q 036427 379 ENLGEPIGQVLVICGRNK-KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA-GPGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 379 ~~~~~~~~~~lvi~G~~~-~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s-G~~tllEAma~GlPVI~~~~ 454 (536)
..+.++++++|..+ +..+.+.+......+.+.|.. .++..+++.||++|+.- |++ .=|.|+|+|+|+.-.
T Consensus 205 ----~~~~~ivl~G~~~e~~~~~~i~~~~~~~~~~l~g~~sL~el~ali~~a~l~I~~DSGp~--HlAaA~~~P~i~lfG 278 (334)
T TIGR02195 205 ----DQGYQVVLFGSAKDHPAGNEIEALLPGELRNLAGETSLDEAVDLIALAKAVVTNDSGLM--HVAAALNRPLVALYG 278 (334)
T ss_pred ----HCCCEEEEEEChhhHHHHHHHHHhCCcccccCCCCCCHHHHHHHHHhCCEEEeeCCHHH--HHHHHcCCCEEEEEC
Confidence 23456655555443 233444432111223356654 69999999999999874 544 448999999999766
Q ss_pred CCc
Q 036427 455 IAG 457 (536)
Q Consensus 455 ~~~ 457 (536)
+.+
T Consensus 279 ~t~ 281 (334)
T TIGR02195 279 STS 281 (334)
T ss_pred CCC
Confidence 544
No 152
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.18 E-value=0.00016 Score=70.56 Aligned_cols=212 Identities=18% Similarity=0.147 Sum_probs=117.4
Q ss_pred ccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCC---CCcHHHHH
Q 036427 293 KLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEG---MGPIEATA 369 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g---~k~~~~~l 369 (536)
+.+-.+|.-...+.+.+...|++ ...+|||+.+-...++.+..-+ -...++|...-|+.. ..+...++
T Consensus 177 rrc~~vf~rD~~Taq~L~~rgvn---a~~vGnpmmD~L~p~~~~~q~l------~~g~~viaLLPGsR~pea~~nl~~il 247 (412)
T COG4370 177 RRCWAVFPRDALTAQHLANRGVN---AAYVGNPMMDGLPPPERDPQLL------LTGVPVIALLPGSRVPEAQTNLAVIL 247 (412)
T ss_pred ccceeeeccccccHHHHHhcCCc---hhhccChhhccCCCccCCchhh------ccCCceEEecCCCCChHHHhhHHHHH
Confidence 44555666666667777777776 5678998876554433222211 133456666666542 12222222
Q ss_pred HHHHHHhhhcccCCCCcEEEE--EecCCH-HHHHHHHcCCCC--------CCEEEecChhhHHHHHhhcCeEEECCChHH
Q 036427 370 RALGNALYDENLGEPIGQVLV--ICGRNK-KLANKLLSTDWK--------IPVQVKGFVSKMEEAMGACDCIITKAGPGT 438 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lv--i~G~~~-~l~~~l~~~~~~--------~~V~~~G~v~~l~~ll~~aDv~V~~sG~~t 438 (536)
..+-.... ....+.++- .-+-.. -+....++.++. ++..+.=....+.++++.+|+.+..+| |
T Consensus 248 ~slcal~~----~~a~vvfw~ai~~~lpl~~l~~l~e~~gWq~~ad~~~kdnc~l~lsqqsfadiLH~adaalgmAG--T 321 (412)
T COG4370 248 GSLCALPA----MFALVVFWAAIAPELPLLLLWTLEERQGWQPLADRFGKDNCSLWLSQQSFADILHAADAALGMAG--T 321 (412)
T ss_pred HHHhhhHH----HHHHHHHHhccCcCCCHHHHHHHHHhcCcchhhhhhccCceEEEEeHHHHHHHHHHHHHHHHhcc--c
Confidence 22211111 011111111 111111 122333333322 233333334578999999999877666 4
Q ss_pred HHH-HHHhCCcEEEeccCCccccCChhhHhh----CCceee-cC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCc
Q 036427 439 IAE-AMIRGLPIILNDFIAGQEAGNVPYVVE----NGCGKF-SK-SPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPD 510 (536)
Q Consensus 439 llE-Ama~GlPVI~~~~~~~~e~~na~~lv~----~g~g~~-~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~ 510 (536)
..| +.-.|+|||.+|..+-+. |..+.+. .|+... ++ .+.+-....++++. |++.......+++++. +..
T Consensus 322 AtEQavGLGkPvi~fPg~GPQy--~pgFA~rQ~rLLG~sltlv~~~aq~a~~~~q~ll~-dp~r~~air~nGqrRiGqaG 398 (412)
T COG4370 322 ATEQAVGLGKPVIGFPGQGPQY--NPGFAERQQRLLGASLTLVRPEAQAAAQAVQELLG-DPQRLTAIRHNGQRRIGQAG 398 (412)
T ss_pred hHHHhhccCCceeecCCCCCCc--ChHHHHHHHHHhcceeeecCCchhhHHHHHHHHhc-ChHHHHHHHhcchhhccCcc
Confidence 455 899999999999765443 3333332 255443 34 44444455555999 9999999999998765 556
Q ss_pred hHHHHHHHHHHH
Q 036427 511 AVFRIVQDLHEL 522 (536)
Q Consensus 511 ~~~~i~~~i~~l 522 (536)
...+|++++.+.
T Consensus 399 aa~rIAe~l~e~ 410 (412)
T COG4370 399 AARRIAEELGEM 410 (412)
T ss_pred hHHHHHHHHHHh
Confidence 777788887664
No 153
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=98.14 E-value=0.00022 Score=72.40 Aligned_cols=191 Identities=18% Similarity=0.154 Sum_probs=103.0
Q ss_pred HHhhCCCEEEEcCcccchHHHHHHHH-cCCCCCceEEEEecCCCCcccccccccCCEEEEcCHHHHHHHHHhCC-CCCCE
Q 036427 242 LMKYQPDIIISVHPLMQHVPLRILRA-KGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAGL-QASQI 319 (536)
Q Consensus 242 l~~~kPDvVi~~~~~~~~i~~~~~~~-~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~~~~~~l~~~g~-~~~ki 319 (536)
++.-.||+||+.+...... .+.+++ .|- +.+.|.+. .++.....+|.++++..+ +. ...++
T Consensus 53 ~~~~~pdLiIsaGr~t~~~-~~~l~r~~gg--~~~~V~i~------~P~~~~~~FDlvi~p~HD--------~~~~~~Nv 115 (311)
T PF06258_consen 53 LEPPWPDLIISAGRRTAPA-ALALRRASGG--RTKTVQIM------DPRLPPRPFDLVIVPEHD--------RLPRGPNV 115 (311)
T ss_pred ccCCCCcEEEECCCchHHH-HHHHHHHcCC--CceEEEEc------CCCCCccccCEEEECccc--------CcCCCCce
Confidence 4455699999999765443 333443 331 23443332 233446788999998765 23 23444
Q ss_pred EEe-CC--CCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcH-H----HHHHHHHHHhhhcccCCCCcEEEEE
Q 036427 320 KVY-GL--PVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPI-E----ATARALGNALYDENLGEPIGQVLVI 391 (536)
Q Consensus 320 ~vi-gn--pv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~-~----~~l~al~~~l~~~~~~~~~~~~lvi 391 (536)
..+ +. .+.++... ....++..++.-.+...+.+++||......+ . .++..+.+... ..+..+++.
T Consensus 116 l~t~ga~~~i~~~~l~--~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~-----~~~~~~~vt 188 (311)
T PF06258_consen 116 LPTLGAPNRITPERLA--EAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAA-----AYGGSLLVT 188 (311)
T ss_pred EecccCCCcCCHHHHH--HHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHH-----hCCCeEEEE
Confidence 433 22 22221110 1122333444432333445567775443222 2 33344443333 233455554
Q ss_pred ecCC--HHHHHHHHcCC-CCCCEEEecCh--hhHHHHHhhcCeEEECCC-hHHHHHHHHhCCcEEEeccCC
Q 036427 392 CGRN--KKLANKLLSTD-WKIPVQVKGFV--SKMEEAMGACDCIITKAG-PGTIAEAMIRGLPIILNDFIA 456 (536)
Q Consensus 392 ~G~~--~~l~~~l~~~~-~~~~V~~~G~v--~~l~~ll~~aDv~V~~sG-~~tllEAma~GlPVI~~~~~~ 456 (536)
.... .+..+.+++.- ....+.+.... +-+..+|+.||.+|+..- -..+.||++.|+||.+.+...
T Consensus 189 tSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 189 TSRRTPPEAEAALRELLKDNPGVYIWDGTGENPYLGFLAAADAIVVTEDSVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred cCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcHHHHHHhCCEEEEcCccHHHHHHHHHcCCCEEEecCCC
Confidence 4432 24555555442 33456343332 357899999999999874 455789999999999998754
No 154
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=98.13 E-value=6.9e-05 Score=81.36 Aligned_cols=168 Identities=15% Similarity=0.152 Sum_probs=112.3
Q ss_pred CCEEEEecCCCCC--CcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHH--HHHHHcCCCCCCEEEecChhhHHHH--
Q 036427 350 LPAVLLMGGGEGM--GPIEATARALGNALYDENLGEPIGQVLVICGRNKKL--ANKLLSTDWKIPVQVKGFVSKMEEA-- 423 (536)
Q Consensus 350 ~~~il~~gg~~g~--k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l--~~~l~~~~~~~~V~~~G~v~~l~~l-- 423 (536)
..+|++..|+... .-..+....++..+.. -++..+++..-..... .+.+... ...+|...+|.++.+-+
T Consensus 277 ~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~----~~~~~FiW~~~~~~~~~~~~~~~~~-~~~nV~~~~W~PQ~~lll~ 351 (496)
T KOG1192|consen 277 HSVVYISFGSMVNSADLPEEQKKELAKALES----LQGVTFLWKYRPDDSIYFPEGLPNR-GRGNVVLSKWAPQNDLLLD 351 (496)
T ss_pred CCeEEEECCcccccccCCHHHHHHHHHHHHh----CCCceEEEEecCCcchhhhhcCCCC-CcCceEEecCCCcHHHhcC
Confidence 3577777776542 2234555666666652 2456667765543211 1212111 23479989999876544
Q ss_pred HhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHH
Q 036427 424 MGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAM 499 (536)
Q Consensus 424 l~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m 499 (536)
-....++|+++|-++++|++.+|+|+|+.|..++|.. |+..+++.|.+.+.. +...+.+++..+++ ++++.+..
T Consensus 352 H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~-Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~-~~~y~~~~ 429 (496)
T KOG1192|consen 352 HPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPL-NARLLVRHGGGGVLDKRDLVSEELLEAIKEILE-NEEYKEAA 429 (496)
T ss_pred CCcCcEEEECCcccHHHHHHhcCCceecCCccccchh-HHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHc-ChHHHHHH
Confidence 2335689999998888999999999999999988876 999999998877653 23338999999999 88888877
Q ss_pred HHHHHHhc-CCchHHHHHHHHHHHHhh
Q 036427 500 SQNALKLA-RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 500 ~~~a~~~a-~~~~~~~i~~~i~~l~~~ 525 (536)
.+.+.... ++... ..+..+.+...+
T Consensus 430 ~~l~~~~~~~p~~~-~~~~~~~e~~~~ 455 (496)
T KOG1192|consen 430 KRLSEILRDQPISP-ELAVKWVEFVAR 455 (496)
T ss_pred HHHHHHHHcCCCCH-HHHHHHHHHHHh
Confidence 77776644 33444 555544454444
No 155
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=98.10 E-value=0.00087 Score=69.52 Aligned_cols=100 Identities=15% Similarity=0.074 Sum_probs=61.1
Q ss_pred CEE-EEecCCCCCCcH-HHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HH--HHHHHcC-CCCCCEEEecCh--hhHHH
Q 036427 351 PAV-LLMGGGEGMGPI-EATARALGNALYDENLGEPIGQVLVICGRNK-KL--ANKLLST-DWKIPVQVKGFV--SKMEE 422 (536)
Q Consensus 351 ~~i-l~~gg~~g~k~~-~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l--~~~l~~~-~~~~~V~~~G~v--~~l~~ 422 (536)
++| +..|++...|.. .+.+.++++.+. ..+.++++++|.++ +. .+.+.+. .....+.+.|.. .++..
T Consensus 184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~-----~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~a 258 (352)
T PRK10422 184 NYVVIQPTARQIFKCWDNDKFSAVIDALQ-----ARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGA 258 (352)
T ss_pred CeEEEecCCCccccCCCHHHHHHHHHHHH-----HCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHH
Confidence 444 445554444443 455666666664 23566666666554 22 2334332 112235566754 69999
Q ss_pred HHhhcCeEEECC-ChHHHHHHHHhCCcEEEeccCCc
Q 036427 423 AMGACDCIITKA-GPGTIAEAMIRGLPIILNDFIAG 457 (536)
Q Consensus 423 ll~~aDv~V~~s-G~~tllEAma~GlPVI~~~~~~~ 457 (536)
+++.||++|+.- |++ .=|.|+|+|+|+.=.+++
T Consensus 259 li~~a~l~v~nDSGp~--HlAaA~g~P~v~lfGpt~ 292 (352)
T PRK10422 259 LIDHAQLFIGVDSAPA--HIAAAVNTPLICLFGATD 292 (352)
T ss_pred HHHhCCEEEecCCHHH--HHHHHcCCCEEEEECCCC
Confidence 999999999874 644 448899999999865544
No 156
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.07 E-value=0.00096 Score=71.82 Aligned_cols=101 Identities=15% Similarity=0.066 Sum_probs=66.8
Q ss_pred hHHHHHhhcCeEEECC----ChHHHHHHHHhCCcEEEeccCCc----cccCChhhHhhCCceeecC-------CHHHHHH
Q 036427 419 KMEEAMGACDCIITKA----GPGTIAEAMIRGLPIILNDFIAG----QEAGNVPYVVENGCGKFSK-------SPKEIAN 483 (536)
Q Consensus 419 ~l~~ll~~aDv~V~~s----G~~tllEAma~GlPVI~~~~~~~----~e~~na~~lv~~g~g~~~~-------d~~~La~ 483 (536)
+..+++..||+.|.|| .|.|.+|+.++|+|.|.++..+- ++... .-...|+-++-. ..++|++
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~--~~~~~GV~VvdR~~~n~~e~v~~la~ 539 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIE--DPEEYGVYVVDRRDKNYDESVNQLAD 539 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS---HHGGGTEEEE-SSSS-HHHHHHHHHH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhc--cCcCCcEEEEeCCCCCHHHHHHHHHH
Confidence 6899999999999999 47999999999999999997542 11100 011223322222 3567777
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 484 MVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 484 ~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
.|..+..+++..+..++.++.++++...|.+....+.+
T Consensus 540 ~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~ 577 (633)
T PF05693_consen 540 FLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEK 577 (633)
T ss_dssp HHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 78888776788888999999999988888776665544
No 157
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=98.04 E-value=8.1e-05 Score=69.82 Aligned_cols=147 Identities=18% Similarity=0.200 Sum_probs=75.2
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhh-ccccceeecCCCccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKH-GPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~-~~l~~~~~~~~~~~~~~ 223 (536)
..|+|.+.+. |....+..|+++|++++| ++.|+++..... ++....+. ++.....+ .+-
T Consensus 22 ~~iWiHa~Sv--GE~~a~~~Li~~l~~~~p-~~~illT~~T~t-----------g~~~~~~~~~~~v~~~~-~P~----- 81 (186)
T PF04413_consen 22 PLIWIHAASV--GEVNAARPLIKRLRKQRP-DLRILLTTTTPT-----------GREMARKLLPDRVDVQY-LPL----- 81 (186)
T ss_dssp T-EEEE-SSH--HHHHHHHHHHHHHTT----TS-EEEEES-CC-----------HHHHHHGG-GGG-SEEE---------
T ss_pred CcEEEEECCH--HHHHHHHHHHHHHHHhCC-CCeEEEEecCCc-----------hHHHHHHhCCCCeEEEE-eCc-----
Confidence 6799998887 999999999999999876 577777654221 12111111 11011111 100
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCc-ccchHHHHHHHHcCCCCCceEEEEecCCCCc---cc-------cccc
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHP-LMQHVPLRILRAKGLLKKIVFTTVITDLSTC---HP-------TWFH 292 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~-~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~---~~-------~~~~ 292 (536)
. ....+.++++..+||+++.... .+-.+ +..+++.| +|++.+-.-++.. .. +.+.
T Consensus 82 ------D---~~~~~~rfl~~~~P~~~i~~EtElWPnl-l~~a~~~~----ip~~LvNarls~~s~~~~~~~~~~~r~~l 147 (186)
T PF04413_consen 82 ------D---FPWAVRRFLDHWRPDLLIWVETELWPNL-LREAKRRG----IPVVLVNARLSERSFRRYRRFPFLFRPLL 147 (186)
T ss_dssp ------S---SHHHHHHHHHHH--SEEEEES----HHH-HHH---------S-EEEEEE--------------HHHHHHG
T ss_pred ------c---CHHHHHHHHHHhCCCEEEEEccccCHHH-HHHHhhcC----CCEEEEeeeeccccchhhhhhHHHHHHHH
Confidence 0 1135667899999999987653 22221 33445455 8887665433321 11 2234
Q ss_pred ccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCC
Q 036427 293 KLVTRCYCPTADVAKRAMKAGLQASQIKVYGLP 325 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignp 325 (536)
+.+|.+++.++..++.+.+.|++++++.++||.
T Consensus 148 ~~f~~i~aqs~~da~r~~~lG~~~~~v~v~Gnl 180 (186)
T PF04413_consen 148 SRFDRILAQSEADAERFRKLGAPPERVHVTGNL 180 (186)
T ss_dssp GG-SEEEESSHHHHHHHHTTT-S--SEEE---G
T ss_pred HhCCEEEECCHHHHHHHHHcCCCcceEEEeCcc
Confidence 678999999999999999999999999999984
No 158
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=97.99 E-value=0.0057 Score=62.57 Aligned_cols=100 Identities=15% Similarity=0.043 Sum_probs=61.4
Q ss_pred CCEE-EEecCCCCCCcH-HHHHHHHHHHhhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecCh--hhHHHH
Q 036427 350 LPAV-LLMGGGEGMGPI-EATARALGNALYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFV--SKMEEA 423 (536)
Q Consensus 350 ~~~i-l~~gg~~g~k~~-~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v--~~l~~l 423 (536)
.+++ +..|++...+.. .+.+.++++.+. ..+.+++++.|... +..+.+.+. ...+.+.|.. .++..+
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~-----~~~~~ivl~~G~~~e~~~~~~i~~~--~~~~~l~g~~sL~elaal 250 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLA-----PSGLRIKLPWGAEHEEQRAKRLAEG--FPYVEVLPKLSLEQVARV 250 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHH-----HCCCeEEEeCCCHHHHHHHHHHHcc--CCcceecCCCCHHHHHHH
Confidence 3454 455555443433 455666666664 23455555445332 233444432 2346666754 599999
Q ss_pred HhhcCeEEECC-ChHHHHHHHHhCCcEEEeccCCcc
Q 036427 424 MGACDCIITKA-GPGTIAEAMIRGLPIILNDFIAGQ 458 (536)
Q Consensus 424 l~~aDv~V~~s-G~~tllEAma~GlPVI~~~~~~~~ 458 (536)
++.||++|+.- |++ .=|.|+|+|+|+.=.++++
T Consensus 251 i~~a~l~I~nDSGp~--HlA~A~g~p~valfGpt~p 284 (322)
T PRK10964 251 LAGAKAVVSVDTGLS--HLTAALDRPNITLYGPTDP 284 (322)
T ss_pred HHhCCEEEecCCcHH--HHHHHhCCCEEEEECCCCc
Confidence 99999999874 644 4599999999998765543
No 159
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=97.93 E-value=0.0024 Score=65.18 Aligned_cols=129 Identities=14% Similarity=0.124 Sum_probs=71.6
Q ss_pred CCCEE-EEecCCCCCCcH-HHHHHHHHHHhhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecCh--hhHHH
Q 036427 349 DLPAV-LLMGGGEGMGPI-EATARALGNALYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFV--SKMEE 422 (536)
Q Consensus 349 ~~~~i-l~~gg~~g~k~~-~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v--~~l~~ 422 (536)
+.+.| +..|++...+.. .+.+.++++.+. +.+..++++.|... +..+.+.+. . .+..+.|.. .++..
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~-----~~~~~~vl~~g~~~e~~~~~~i~~~-~-~~~~l~g~~sL~el~a 250 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLL-----ARGLQIVLPWGNDAEKQRAERIAEA-L-PGAVVLPKMSLAEVAA 250 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHH-----HCCCeEEEeCCCHHHHHHHHHHHhh-C-CCCeecCCCCHHHHHH
Confidence 34444 455555444443 355666666664 12455555545332 223334332 1 123456654 58999
Q ss_pred HHhhcCeEEECC-ChHHHHHHHHhCCcEEEeccCCcccc----CChhhHhhCCceeecC--CHHHHHHHHHHHh
Q 036427 423 AMGACDCIITKA-GPGTIAEAMIRGLPIILNDFIAGQEA----GNVPYVVENGCGKFSK--SPKEIANMVSQWF 489 (536)
Q Consensus 423 ll~~aDv~V~~s-G~~tllEAma~GlPVI~~~~~~~~e~----~na~~lv~~g~g~~~~--d~~~La~~I~~ll 489 (536)
+++.||++|+.- |++ .=|.++|+|+|+.-.+++... +....++... -+. +++++.++++++|
T Consensus 251 li~~a~l~I~~DSgp~--HlAaa~g~P~i~lfg~t~p~~~~P~~~~~~~~~~~---~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 251 LLAGADAVVGVDTGLT--HLAAALDKPTVTLYGATDPGRTGGYGKPNVALLGE---SGANPTPDEVLAALEELL 319 (319)
T ss_pred HHHcCCEEEeCCChHH--HHHHHcCCCEEEEECCCCHhhcccCCCCceEEccC---ccCCCCHHHHHHHHHhhC
Confidence 999999999874 644 448899999998765443221 0001111111 022 7888888887764
No 160
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.90 E-value=0.0021 Score=66.26 Aligned_cols=268 Identities=16% Similarity=0.113 Sum_probs=128.0
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccccc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 223 (536)
+||||++..+. -|.......+...|++.+|+ +++.++..... ..+.+..|-........... +
T Consensus 1 ~~kIliir~~~-iGD~vlt~p~~~~lk~~~P~-a~i~~~~~~~~-------------~~i~~~~p~I~~vi~~~~~~--~ 63 (334)
T COG0859 1 MMKILVIRLSK-LGDVVLTLPLLRTLKKAYPN-AKIDVLVPKGF-------------APILKLNPEIDKVIIIDKKK--K 63 (334)
T ss_pred CceEEEEeccc-hhHHHhHHHHHHHHHHHCCC-CEEEEEeccch-------------HHHHhcChHhhhhccccccc--c
Confidence 58999998764 59999999999999999884 66654422110 00111111111111000000 0
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEE-EEecCCC-CcccccccccCCEEEEc
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFT-TVITDLS-TCHPTWFHKLVTRCYCP 301 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v-~~~~d~~-~~~~~~~~~~~d~vi~~ 301 (536)
+ ........+.+.+++.++|+|+.....+.. ..+....+ +|.. -+.+... ......+... .-...
T Consensus 64 ~-----~~~~~~~~l~~~lr~~~yD~vidl~~~~ks--a~l~~~~~----~~~r~g~~~~~~r~~~~~~~~~~--~~~~~ 130 (334)
T COG0859 64 G-----LGLKERLALLRTLRKERYDAVIDLQGLLKS--ALLALLLG----IPFRIGFDKKSARELLLNKFYPR--LDKPE 130 (334)
T ss_pred c-----cchHHHHHHHHHhhccCCCEEEECcccHHH--HHHHHHhC----CCcccccccccchhHHHHHhhhc--cCccc
Confidence 0 112233477788999999999987654322 12222222 2321 1110000 0000111111 11223
Q ss_pred CHHHHHHHHHh----CCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecC-CCC-CCc-HHHHHHHHHH
Q 036427 302 TADVAKRAMKA----GLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGG-GEG-MGP-IEATARALGN 374 (536)
Q Consensus 302 S~~~~~~l~~~----g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg-~~g-~k~-~~~~l~al~~ 374 (536)
.+...+.+... +..... .....+.......+....+.-.. ++++++..| +.+ .+. ..+.+..+++
T Consensus 131 ~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~i~i~pg~s~~~~K~wp~e~~~~l~~ 202 (334)
T COG0859 131 GQHVVERYLALLEDLGLYPPP-------EPQLDFPLPRPPIELAKNLAKFD-RPYIVINPGASRGSAKRWPLEHYAELAE 202 (334)
T ss_pred chhHHHHHHHHHHHhcCCCCC-------CCccCcccccCHHHHHHHHHhcC-CCeEEEeccccccccCCCCHHHHHHHHH
Confidence 44444444332 222111 11111211111222222111111 466666555 442 333 3466777777
Q ss_pred HhhhcccCCCCcEEEEEecCCH-HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC-ChHHHHHHHHhCCcEE
Q 036427 375 ALYDENLGEPIGQVLVICGRNK-KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA-GPGTIAEAMIRGLPII 450 (536)
Q Consensus 375 ~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s-G~~tllEAma~GlPVI 450 (536)
.+.+ ...++++..|..+ +..+.+.+. ....+.+.|.. .++..++..||++|+.- |++ .=|.|.|+|+|
T Consensus 203 ~l~~-----~~~~Vvl~g~~~e~e~~~~i~~~-~~~~~~l~~k~sL~e~~~li~~a~l~I~~DSg~~--HlAaA~~~P~I 274 (334)
T COG0859 203 LLIA-----KGYQVVLFGGPDEEERAEEIAKG-LPNAVILAGKTSLEELAALIAGADLVIGNDSGPM--HLAAALGTPTI 274 (334)
T ss_pred HHHH-----CCCEEEEecChHHHHHHHHHHHh-cCCccccCCCCCHHHHHHHHhcCCEEEccCChHH--HHHHHcCCCEE
Confidence 7763 3355444444422 222333321 11122255654 69999999999999874 544 34999999999
Q ss_pred EeccCCc
Q 036427 451 LNDFIAG 457 (536)
Q Consensus 451 ~~~~~~~ 457 (536)
++-....
T Consensus 275 ~iyg~t~ 281 (334)
T COG0859 275 ALYGPTS 281 (334)
T ss_pred EEECCCC
Confidence 9876543
No 161
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=97.82 E-value=0.0035 Score=67.36 Aligned_cols=264 Identities=14% Similarity=0.132 Sum_probs=136.0
Q ss_pred CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC-CCC-----ccc--ccc---cccCCEEEEcCHHHHHHHHHh--
Q 036427 246 QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD-LST-----CHP--TWF---HKLVTRCYCPTADVAKRAMKA-- 312 (536)
Q Consensus 246 kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~-----~~~--~~~---~~~~d~vi~~S~~~~~~l~~~-- 312 (536)
.-|+|.+++.-+..+|..+ ++.+ ++.++..+.|- +.. +.+ ..+ .-.+|.|-..+...++.++..
T Consensus 141 ~~D~VWVhDYhL~llP~~L-R~~~--~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~ 217 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQML-RERG--PDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCK 217 (474)
T ss_dssp TT-EEEEESGGGTTHHHHH-HHTT----SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCcHHHHHHHH-Hhhc--CCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHH
Confidence 3478888887666667654 4443 23566555442 211 122 111 236788888888888876542
Q ss_pred ---CCC--CC-----------CEEEeCCCCCCCCCCC-----C--CchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHH
Q 036427 313 ---GLQ--AS-----------QIKVYGLPVRPSFVKP-----V--RPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATA 369 (536)
Q Consensus 313 ---g~~--~~-----------ki~vignpv~~~~~~~-----~--~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l 369 (536)
|+. .. ++.+.+.+++++.+.. . ...++++++++ .+.++|+-+-+....|++..-+
T Consensus 218 r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~--~~~~ii~gvDrld~~kGi~~kl 295 (474)
T PF00982_consen 218 RLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFK--GKRKIIVGVDRLDYTKGIPEKL 295 (474)
T ss_dssp HHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHHTT--T-SEEEEEE--B-GGG-HHHHH
T ss_pred HHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcC--CCcEEEEEeccchhhcCHHHHH
Confidence 221 11 2445555666654421 1 11234555553 2236666666666667777767
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecC-----CH---HHHHHHHcC-----------CCCCCEEEecC-h--hhHHHHHhhc
Q 036427 370 RALGNALYDENLGEPIGQVLVICGR-----NK---KLANKLLST-----------DWKIPVQVKGF-V--SKMEEAMGAC 427 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~-----~~---~l~~~l~~~-----------~~~~~V~~~G~-v--~~l~~ll~~a 427 (536)
.++.+-|.+-......+.+ +.++. .+ ++++++.+. ++ .+|.++.. + +++..+|+.|
T Consensus 296 ~Afe~fL~~~P~~~~kv~l-iQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~-~PI~~~~~~~~~~~~~aly~~a 373 (474)
T PF00982_consen 296 RAFERFLERYPEYRGKVVL-IQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDW-TPIIYIYRSLSFEELLALYRAA 373 (474)
T ss_dssp HHHHHHHHH-GGGTTTEEE-EEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB--SEEEE-S---HHHHHHHHHH-
T ss_pred HHHHHHHHhCcCccCcEEE-EEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCc-eeEEEEecCCCHHHHHHHHHhh
Confidence 6666555431111223333 33221 11 233333221 22 24655543 3 5899999999
Q ss_pred CeEEECC---C-hHHHHHHHHhCCc----EEEeccCCccccCChhhHhhCCce-eecC--CHHHHHHHHHHHhCCCHHHH
Q 036427 428 DCIITKA---G-PGTIAEAMIRGLP----IILNDFIAGQEAGNVPYVVENGCG-KFSK--SPKEIANMVSQWFGPKIDEL 496 (536)
Q Consensus 428 Dv~V~~s---G-~~tllEAma~GlP----VI~~~~~~~~e~~na~~lv~~g~g-~~~~--d~~~La~~I~~ll~~d~~~~ 496 (536)
|+++.+| | -++..|+.+|..+ +|++... .+. ...+.| ..++ |.++++++|.+.|+|.++.|
T Consensus 374 Dv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefa------Gaa--~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er 445 (474)
T PF00982_consen 374 DVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFA------GAA--EQLSEAALLVNPWDIEEVADAIHEALTMPPEER 445 (474)
T ss_dssp SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTB------GGG--GT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHH
T ss_pred hhEEecchhhccCCcceEEEEEecCCCCceEeeccC------CHH--HHcCCccEEECCCChHHHHHHHHHHHcCCHHHH
Confidence 9988887 6 6788999999876 3333321 121 222322 4554 99999999999999888888
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 497 KAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 497 ~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
+...+.-++....+...+.++.+++-++
T Consensus 446 ~~r~~~~~~~v~~~~~~~W~~~~l~~L~ 473 (474)
T PF00982_consen 446 KERHARLREYVREHDVQWWAESFLRDLK 473 (474)
T ss_dssp HHHHHHHHHHHHHT-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHhCCHHHHHHHHHHHhh
Confidence 8888888888888888888888877665
No 162
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.76 E-value=0.01 Score=59.33 Aligned_cols=86 Identities=19% Similarity=0.237 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcC-CCCCCEEEecCh--hhHHHHHhhcCeEEEC-CChHHHH
Q 036427 366 EATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLST-DWKIPVQVKGFV--SKMEEAMGACDCIITK-AGPGTIA 440 (536)
Q Consensus 366 ~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~-~~~~~V~~~G~v--~~l~~ll~~aDv~V~~-sG~~tll 440 (536)
.+.+.++++.+.+ .+.+++++.+..+ +..+.+.+. +....+.+.|.. .++..+++.||++|+. ||+ +.
T Consensus 139 ~~~~~~l~~~l~~-----~~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l~I~~Dsg~--~H 211 (279)
T cd03789 139 AERFAALADRLLA-----RGARVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADLVVTNDSGP--MH 211 (279)
T ss_pred HHHHHHHHHHHHH-----CCCEEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCEEEeeCCHH--HH
Confidence 3455666666542 2566665554433 233333332 112234455553 6899999999999998 453 34
Q ss_pred HHHHhCCcEEEeccCCcc
Q 036427 441 EAMIRGLPIILNDFIAGQ 458 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~ 458 (536)
-|.++|+|+|+.-.....
T Consensus 212 lA~a~~~p~i~l~g~~~~ 229 (279)
T cd03789 212 LAAALGTPTVALFGPTDP 229 (279)
T ss_pred HHHHcCCCEEEEECCCCc
Confidence 478999999998765443
No 163
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=97.71 E-value=0.0064 Score=64.83 Aligned_cols=268 Identities=12% Similarity=0.075 Sum_probs=151.9
Q ss_pred HhhCC-CEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCCC-----ccc--ccc---cccCCEEEEcCHHHHHHHH
Q 036427 243 MKYQP-DIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLST-----CHP--TWF---HKLVTRCYCPTADVAKRAM 310 (536)
Q Consensus 243 ~~~kP-DvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~-----~~~--~~~---~~~~d~vi~~S~~~~~~l~ 310 (536)
+..+| |+|.+|..-+..+|.. +++++. +.++..++| -+.. ..| ..+ .-.+|.|-..+....+.+.
T Consensus 119 ~~~~~~D~VWVHDYhL~llp~~-LR~~~~--~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl 195 (474)
T PRK10117 119 PLLKDDDIIWIHDYHLLPFASE-LRKRGV--NNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFL 195 (474)
T ss_pred HhcCCCCEEEEeccHhhHHHHH-HHHhCC--CCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHH
Confidence 33444 6888887766555554 444443 234444443 2211 111 111 1256777777777777665
Q ss_pred Hh-----CCCC------------CCEEEeCCCCCCCCCCCCC------chHHHHHHcCCCCCCCEEEEecCCCCCCcHHH
Q 036427 311 KA-----GLQA------------SQIKVYGLPVRPSFVKPVR------PKVELRRELGMDEDLPAVLLMGGGEGMGPIEA 367 (536)
Q Consensus 311 ~~-----g~~~------------~ki~vignpv~~~~~~~~~------~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~ 367 (536)
.. |+.. -++.+.|.++|++.+.... ...++++.++ ++++|+-+-+....|++.+
T Consensus 196 ~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~~lr~~~~---~~~lilgVDRLDytKGi~~ 272 (474)
T PRK10117 196 DCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAELK---NVQNIFSVERLDYSKGLPE 272 (474)
T ss_pred HHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHHHHHHHcC---CCeEEEEecccccccCHHH
Confidence 41 2211 0234455666765442110 1123454543 4556666666666688877
Q ss_pred HHHHHHHHhhhcccCCCCcEEEEEecCC-----H---HHHHHHHcC--------CC--CCCEEEecC-h--hhHHHHHhh
Q 036427 368 TARALGNALYDENLGEPIGQVLVICGRN-----K---KLANKLLST--------DW--KIPVQVKGF-V--SKMEEAMGA 426 (536)
Q Consensus 368 ~l~al~~~l~~~~~~~~~~~~lvi~G~~-----~---~l~~~l~~~--------~~--~~~V~~~G~-v--~~l~~ll~~ 426 (536)
-+.++...|..-.....++.+ +.+... + ++++++.+. +- -.+|.++.. + +++..+|+.
T Consensus 273 rl~Afe~fL~~~Pe~~gkvvl-vQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ 351 (474)
T PRK10117 273 RFLAYEALLEKYPQHHGKIRY-TQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRY 351 (474)
T ss_pred HHHHHHHHHHhChhhcCCEEE-EEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHh
Confidence 777776655421111122223 322221 1 233333322 10 123544332 2 478899999
Q ss_pred cCeEEECC---C-hHHHHHHHHhCCc-----EEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHH
Q 036427 427 CDCIITKA---G-PGTIAEAMIRGLP-----IILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDE 495 (536)
Q Consensus 427 aDv~V~~s---G-~~tllEAma~GlP-----VI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~ 495 (536)
||+++..+ | -++.-|+.+|-.| .|.+.. .|.+..| +...+++ |.++++++|.+.|+|.++.
T Consensus 352 ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSef-----AGaA~~L---~~AllVNP~d~~~~A~Ai~~AL~Mp~~E 423 (474)
T PRK10117 352 SDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQF-----AGAANEL---TSALIVNPYDRDEVAAALDRALTMPLAE 423 (474)
T ss_pred ccEEEecccccccccccchheeeecCCCCccEEEecc-----cchHHHh---CCCeEECCCCHHHHHHHHHHHHcCCHHH
Confidence 99988877 5 5677899999763 444432 2233334 2355665 9999999999999988888
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 496 LKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 496 ~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|++-.+.-++....+...+.++..++.++.
T Consensus 424 r~~R~~~l~~~v~~~dv~~W~~~fL~~L~~ 453 (474)
T PRK10117 424 RISRHAEMLDVIVKNDINHWQECFISDLKQ 453 (474)
T ss_pred HHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Confidence 888778888888888888888777665543
No 164
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=97.70 E-value=0.00026 Score=62.27 Aligned_cols=100 Identities=16% Similarity=0.294 Sum_probs=66.9
Q ss_pred cEEEEEecCCH----HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccC---Ccc
Q 036427 386 GQVLVICGRNK----KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFI---AGQ 458 (536)
Q Consensus 386 ~~~lvi~G~~~----~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~---~~~ 458 (536)
.++++..|++. +-.+... ....-.|....|.+.+.+.++.||++|.++|.++++|-+..|+|.|+.... +++
T Consensus 37 ~kLiiQ~Grg~~~~~d~~~~~~-k~~gl~id~y~f~psl~e~I~~AdlVIsHAGaGS~letL~l~KPlivVvNd~LMDNH 115 (170)
T KOG3349|consen 37 TKLIIQIGRGQPFFGDPIDLIR-KNGGLTIDGYDFSPSLTEDIRSADLVISHAGAGSCLETLRLGKPLIVVVNDSLMDNH 115 (170)
T ss_pred cEEEEEecCCccCCCCHHHhhc-ccCCeEEEEEecCccHHHHHhhccEEEecCCcchHHHHHHcCCCEEEEeChHhhhhH
Confidence 46678889883 2222222 111223444445689999999999999999999999999999999998764 345
Q ss_pred ccCChhhHhhCCceeecCCHHHHHHHHHH
Q 036427 459 EAGNVPYVVENGCGKFSKSPKEIANMVSQ 487 (536)
Q Consensus 459 e~~na~~lv~~g~g~~~~d~~~La~~I~~ 487 (536)
|..-|.-+.+.|.-+.+. +.++.+.++.
T Consensus 116 Q~ELA~qL~~egyL~~C~-ps~L~~~L~~ 143 (170)
T KOG3349|consen 116 QLELAKQLAEEGYLYYCT-PSTLPAGLAK 143 (170)
T ss_pred HHHHHHHHHhcCcEEEee-ccchHHHHHh
Confidence 544566677777655553 3334444433
No 165
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=97.67 E-value=0.00044 Score=63.82 Aligned_cols=72 Identities=18% Similarity=0.120 Sum_probs=47.4
Q ss_pred HHHHHHHHhhCCCEEEEcCcccchHHHHHHHHc---CCCCCceEEEEec-----CCCCcccccccccCCEEEEcCHHHHH
Q 036427 236 REVAKGLMKYQPDIIISVHPLMQHVPLRILRAK---GLLKKIVFTTVIT-----DLSTCHPTWFHKLVTRCYCPTADVAK 307 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~---g~~~~ip~v~~~~-----d~~~~~~~~~~~~~d~vi~~S~~~~~ 307 (536)
.....++.+.+||+|++++|........+++.. +.. +.+++++.. ..+ ...+.+++.+|.+++..++.++
T Consensus 82 ~~~~~il~r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~-~~kiIyIES~aRv~~lS-lTGklly~~aD~f~VQW~~l~~ 159 (170)
T PF08660_consen 82 LQSLRILRRERPDVIISNGPGTCVPVCLAAKLLRLLGLR-GSKIIYIESFARVKTLS-LTGKLLYPFADRFIVQWEELAE 159 (170)
T ss_pred HHHHHHHHHhCCCEEEEcCCceeeHHHHHHHHHHHhhcc-CCcEEEEEeeeecCCCc-hHHHHHHHhCCEEEEcCHHHHh
Confidence 355567788999999999987654434444443 221 145444432 222 3457788999999999999887
Q ss_pred HH
Q 036427 308 RA 309 (536)
Q Consensus 308 ~l 309 (536)
.+
T Consensus 160 ~y 161 (170)
T PF08660_consen 160 KY 161 (170)
T ss_pred HC
Confidence 63
No 166
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=97.57 E-value=0.0079 Score=62.13 Aligned_cols=101 Identities=14% Similarity=0.038 Sum_probs=59.3
Q ss_pred CCEEEE-ecCCCCCCcH-HHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCC-CEEEecCh--hhHH
Q 036427 350 LPAVLL-MGGGEGMGPI-EATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKI-PVQVKGFV--SKME 421 (536)
Q Consensus 350 ~~~il~-~gg~~g~k~~-~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~-~V~~~G~v--~~l~ 421 (536)
.+.|++ .|+....+.. .+.+.++++.+. ..+..+++++|..+ +..+.+.+..... -+.+.|.. .++.
T Consensus 181 ~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~-----~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ 255 (344)
T TIGR02201 181 QNYIVIQPTSRWFFKCWDNDRFSALIDALH-----ARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLA 255 (344)
T ss_pred CCEEEEeCCCCccccCCCHHHHHHHHHHHH-----hCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHH
Confidence 345544 4443333332 455566666554 23456666655442 2234444321122 24466754 5999
Q ss_pred HHHhhcCeEEECC-ChHHHHHHHHhCCcEEEeccCCc
Q 036427 422 EAMGACDCIITKA-GPGTIAEAMIRGLPIILNDFIAG 457 (536)
Q Consensus 422 ~ll~~aDv~V~~s-G~~tllEAma~GlPVI~~~~~~~ 457 (536)
.+++.||++|+.- |++ .=|.|+|+|+|+.-.+.+
T Consensus 256 ali~~a~l~Vs~DSGp~--HlAaA~g~p~v~Lfgpt~ 290 (344)
T TIGR02201 256 ALIDHARLFIGVDSVPM--HMAAALGTPLVALFGPSK 290 (344)
T ss_pred HHHHhCCEEEecCCHHH--HHHHHcCCCEEEEECCCC
Confidence 9999999999874 544 449999999999865433
No 167
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=97.56 E-value=0.033 Score=64.16 Aligned_cols=264 Identities=15% Similarity=0.133 Sum_probs=148.5
Q ss_pred HHhhCC--CEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC-CCC-----ccc--ccc---cccCCEEEEcCHHHHHH
Q 036427 242 LMKYQP--DIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD-LST-----CHP--TWF---HKLVTRCYCPTADVAKR 308 (536)
Q Consensus 242 l~~~kP--DvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d-~~~-----~~~--~~~---~~~~d~vi~~S~~~~~~ 308 (536)
.+..+| |+|.+|..-+..+|..+ +++. ++.++..+.|- +.. ..| ..+ .-.+|.|=..+...++.
T Consensus 195 ~~~~~~~~d~VWVhDYhL~llP~~L-R~~~--~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~ 271 (854)
T PLN02205 195 MEVINPEDDFVWIHDYHLMVLPTFL-RKRF--NRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARH 271 (854)
T ss_pred HHHhCCCCCEEEEeCchhhHHHHHH-HhhC--CCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHH
Confidence 334456 79998887776667654 4332 23455444442 211 111 011 23578887888887777
Q ss_pred HHH-----hCCCCC---------------CEEEeCCCCCCCCCCCCC-------chHHHHHHcCCCCCCCEEEEecCCCC
Q 036427 309 AMK-----AGLQAS---------------QIKVYGLPVRPSFVKPVR-------PKVELRRELGMDEDLPAVLLMGGGEG 361 (536)
Q Consensus 309 l~~-----~g~~~~---------------ki~vignpv~~~~~~~~~-------~~~~~r~~lgi~~~~~~il~~gg~~g 361 (536)
++. .|+... ++.+.+.++++..+.... ...+++++++- +++++++-+-+...
T Consensus 272 Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~ilgVDrlD~ 350 (854)
T PLN02205 272 FLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCD-QDRIMLLGVDDMDI 350 (854)
T ss_pred HHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhcc-CCCEEEEEccCccc
Confidence 654 233211 233455566665432111 11244545431 23455655555555
Q ss_pred CCcHHHHHHHHHHHhhhcccCCCCcE---EEEEecC-----CH---HHHHHHHcC--------CC--CCCEEEecC-h--
Q 036427 362 MGPIEATARALGNALYDENLGEPIGQ---VLVICGR-----NK---KLANKLLST--------DW--KIPVQVKGF-V-- 417 (536)
Q Consensus 362 ~k~~~~~l~al~~~l~~~~~~~~~~~---~lvi~G~-----~~---~l~~~l~~~--------~~--~~~V~~~G~-v-- 417 (536)
.|++..-+.++.+.|.+ +|.++ .++.+.. .+ ++++++.+. +- -.+|+++.. +
T Consensus 351 ~KGi~~kl~A~e~~L~~----~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~ 426 (854)
T PLN02205 351 FKGISLKLLAMEQLLMQ----HPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKF 426 (854)
T ss_pred ccCHHHHHHHHHHHHHh----CccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCH
Confidence 68887777777666652 44431 2332221 12 222222221 10 124666543 2
Q ss_pred hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCc-------------------EEEeccCCccccCChhhHhhCCceee
Q 036427 418 SKMEEAMGACDCIITKA---G-PGTIAEAMIRGLP-------------------IILNDFIAGQEAGNVPYVVENGCGKF 474 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlP-------------------VI~~~~~~~~e~~na~~lv~~g~g~~ 474 (536)
+++..+|+.||+++..+ | -++..|+.+|..+ +|++.. .|.+..| +..+.
T Consensus 427 ~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEf-----aGaa~~L---~~Ai~ 498 (854)
T PLN02205 427 YERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEF-----IGCSPSL---SGAIR 498 (854)
T ss_pred HHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeec-----cchhHHh---CcCeE
Confidence 58899999999988887 5 5688899988642 233221 2233333 22455
Q ss_pred cC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 475 SK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 475 ~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
++ |.++++++|.+.|+|.++.++.-.+.-+++...+.....++..+.
T Consensus 499 VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~ 547 (854)
T PLN02205 499 VNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQ 547 (854)
T ss_pred ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 55 999999999999998777777666677777777777776665544
No 168
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=97.51 E-value=0.025 Score=56.40 Aligned_cols=254 Identities=14% Similarity=0.081 Sum_probs=135.3
Q ss_pred HHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEE--ecCCCCcc-----------cccccccCCEEEE
Q 036427 234 IAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTV--ITDLSTCH-----------PTWFHKLVTRCYC 300 (536)
Q Consensus 234 ~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~--~~d~~~~~-----------~~~~~~~~d~vi~ 300 (536)
+++.+....+..+-+-+++|+-+-..+ ..+-..|....-.++.+ ..|+.... ++...+.+..+++
T Consensus 27 la~avi~~a~~~r~~rff~HGqFn~~l--wlall~g~~~~~q~yWhiWGaDLYe~~~~lk~rlfy~lRR~aq~rvg~v~a 104 (322)
T PRK02797 27 LAEAVIAKAKANRAQRFFLHGQFNPTL--WLALLSGKIKPKQFYWHIWGADLYEESKGLKFRLFYPLRRLAQKRVGHVFA 104 (322)
T ss_pred HHHHHHHHHhhCccceEEEecCCCHHH--HHHHHhCCcCccceEEEEEChhhhhcccchhHHHHHHHHHHHHhhcCeEEE
Confidence 344555556667788888888664332 22222332221223333 33543111 1223456678888
Q ss_pred cCHHHHHH-HHH-hCCCCCCEEEeCCCCC--CCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCC-CcHHHHHHHHHHH
Q 036427 301 PTADVAKR-AMK-AGLQASQIKVYGLPVR--PSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGM-GPIEATARALGNA 375 (536)
Q Consensus 301 ~S~~~~~~-l~~-~g~~~~ki~vignpv~--~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~-k~~~~~l~al~~~ 375 (536)
....... ..+ ++++. +. .+.|.. +.......+ -.+..+..+.+|-+... .+..+++.++.+.
T Consensus 105 -trGD~~~~a~~~~~v~~-~l--lyfpt~m~~~l~~~~~~---------~~~~~~~tIlvGNSgd~SN~Hie~L~~l~~~ 171 (322)
T PRK02797 105 -TRGDLSYFAQRHPKVPG-SL--LYFPTRMDPSLNTMAND---------RQRAGKMTILVGNSGDRSNRHIEALRALHQQ 171 (322)
T ss_pred -ecchHHHHHHhcCCCCc-cE--EecCCcchhhhcccccc---------ccCCCceEEEEeCCCCCcccHHHHHHHHHHH
Confidence 4444444 333 35543 33 333322 221111110 01223455567776554 3345666666655
Q ss_pred hhhcccCCCCcEEEEEecC--C-HHHHHHHHc----CCCCCCEEEecC-h--hhHHHHHhhcCeEEECC----ChHHHHH
Q 036427 376 LYDENLGEPIGQVLVICGR--N-KKLANKLLS----TDWKIPVQVKGF-V--SKMEEAMGACDCIITKA----GPGTIAE 441 (536)
Q Consensus 376 l~~~~~~~~~~~~lvi~G~--~-~~l~~~l~~----~~~~~~V~~~G~-v--~~l~~ll~~aDv~V~~s----G~~tllE 441 (536)
. ..++++++..|- + +++.+++.+ +-..++++.+-. . ++..++++.||+.+..- |-+|++-
T Consensus 172 ~------~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~l 245 (322)
T PRK02797 172 F------GDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCL 245 (322)
T ss_pred h------CCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHH
Confidence 4 456777776665 3 344444433 222256666543 3 58899999999988764 5678899
Q ss_pred HHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHH
Q 036427 442 AMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQ 517 (536)
Q Consensus 442 Ama~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~ 517 (536)
.+.+|+||+......- -..+.+.|+-++.. |...+.++ .++|...-++... +..+..++
T Consensus 246 Li~~G~~v~l~r~n~f-----wqdl~e~gv~Vlf~~d~L~~~~v~e~-----------~rql~~~dk~~I~-Ff~pn~~~ 308 (322)
T PRK02797 246 LIQLGKPVVLSRDNPF-----WQDLTEQGLPVLFTGDDLDEDIVREA-----------QRQLASVDKNIIA-FFSPNYLQ 308 (322)
T ss_pred HHHCCCcEEEecCCch-----HHHHHhCCCeEEecCCcccHHHHHHH-----------HHHHHhhCcceee-ecCHhHHH
Confidence 9999999999875432 23378888877653 22222221 1222222222222 67777777
Q ss_pred HHHHHHhh
Q 036427 518 DLHELVRQ 525 (536)
Q Consensus 518 ~i~~l~~~ 525 (536)
.|.++++.
T Consensus 309 ~W~~~l~~ 316 (322)
T PRK02797 309 GWRNALAI 316 (322)
T ss_pred HHHHHHHH
Confidence 77777754
No 169
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.50 E-value=0.0099 Score=60.50 Aligned_cols=302 Identities=13% Similarity=0.119 Sum_probs=156.9
Q ss_pred CCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccchhhhhhh
Q 036427 152 SDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATS 231 (536)
Q Consensus 152 ~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 231 (536)
++-++|+...-+-+.++|... |++++..+.... |...... .......... ++.
T Consensus 10 ~~y~~~~~~~~~~~~~~l~~~---g~kvlflE~~~~---~~~k~rd-----~~~~~~~~~~-~~~--------------- 62 (373)
T COG4641 10 SDYNNGSAEYYRGLLRALKMD---GMKVLFLESGDF---WDYKNRD-----IDAEDGCTEA-FYK--------------- 62 (373)
T ss_pred hhhcCCchhhHHHHHHHHHhc---cceEEEEecccH---Hhhhccc-----ccCccchhhe-eec---------------
Confidence 444578888888899999998 899977653221 0000000 0000000000 000
Q ss_pred HHHHHHHHHHHHhhCCCEEEEcCcc-----cchHHHHHHHHcCCCCCceEEEEecCCC-Cccc--cc----cc----ccC
Q 036427 232 TFIAREVAKGLMKYQPDIIISVHPL-----MQHVPLRILRAKGLLKKIVFTTVITDLS-TCHP--TW----FH----KLV 295 (536)
Q Consensus 232 ~~~~~~l~~~l~~~kPDvVi~~~~~-----~~~i~~~~~~~~g~~~~ip~v~~~~d~~-~~~~--~~----~~----~~~ 295 (536)
..........++.++||+|++.... ... +..++. .+.. .+|++++.++.. +.+. .+ +. -..
T Consensus 63 ~~~e~~~~~~i~~fk~d~iv~~~~~~~~~~~~~-~~~~a~-l~~~-~l~~~~w~te~p~~~~~~~~~~~~~~~~~~l~~f 139 (373)
T COG4641 63 DQPELESLLYIREFKPDIIVNMSGDDQPDEEST-IDLWAW-LKRK-CLPVIVWYTEDPYDTDIFSQVAEEQLARRPLFIF 139 (373)
T ss_pred CcHHHHHHHHHHhcCCcEEEEecccccccceeh-HHHHHH-hhcC-CcceEEEEeccchhhhhhhhhhHHHhhccccchh
Confidence 0111233456889999999986532 111 122222 2222 377655544322 1110 11 11 122
Q ss_pred CEEEEcCHHH-HHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHH-
Q 036427 296 TRCYCPTADV-AKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALG- 373 (536)
Q Consensus 296 d~vi~~S~~~-~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~- 373 (536)
|.|+..++.. ++.+.+.+. ..+...++.+++++.+.+..+..... --+.++|.... ...+.++.+.
T Consensus 140 d~v~~~g~~l~~~~yyq~~~-~~~~~~~~~a~d~~~~~~i~~da~~~---------~dL~~ign~~p--Dr~e~~ke~~~ 207 (373)
T COG4641 140 DNVLSFGGGLVANKYYQEGG-ARNCYYLPWAVDDSLFHPIPPDASYD---------VDLNLIGNPYP--DRVEEIKEFFV 207 (373)
T ss_pred hhhhhccchHHHHHHHHhhc-ccceeccCccCCchhcccCCccccce---------eeeEEecCCCc--cHHHHHHHHhh
Confidence 3344334443 455554333 34567788888888776654322111 12334444322 2233333332
Q ss_pred HHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh---hhHHHHHhhcCeEEECC-------C---hHHHH
Q 036427 374 NALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV---SKMEEAMGACDCIITKA-------G---PGTIA 440 (536)
Q Consensus 374 ~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v---~~l~~ll~~aDv~V~~s-------G---~~tll 440 (536)
+-.. .....+-+...|.. +...+....+.+++..+|+. +.+...++.-|+.+.-+ + .+-+.
T Consensus 208 ~ps~----kl~v~rr~~~~g~~--y~~~~~~~~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvF 281 (373)
T COG4641 208 EPSF----KLMVDRRFYVLGPR--YPDDIWGRTWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVF 281 (373)
T ss_pred ccch----hhhccceeeecCCc--cchhhhcccccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHH
Confidence 1111 01111222334443 22223333355577777776 35666777777755432 2 56789
Q ss_pred HHHHhCCcEEEeccCCccccCChhhHhhCCce-eecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC
Q 036427 441 EAMIRGLPIILNDFIAGQEAGNVPYVVENGCG-KFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLAR 508 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e~~na~~lv~~g~g-~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~ 508 (536)
|+++||.|.|.....+ .+-+...|.- ++..|.+++.++++.++. .++.|+++++++.+.+.
T Consensus 282 eiagc~~~liT~~~~~------~e~~f~pgk~~iv~~d~kdl~~~~~yll~-h~~erkeiae~~ye~V~ 343 (373)
T COG4641 282 EIAGCGGFLITDYWKD------LEKFFKPGKDIIVYQDSKDLKEKLKYLLN-HPDERKEIAECAYERVL 343 (373)
T ss_pred HHhhcCCccccccHHH------HHHhcCCchheEEecCHHHHHHHHHHHhc-CcchHHHHHHhhHHHHH
Confidence 9999999988866322 1223444443 345699999999999999 99999999999988653
No 170
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=97.48 E-value=0.062 Score=57.31 Aligned_cols=276 Identities=16% Similarity=0.163 Sum_probs=153.0
Q ss_pred HHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCC-----Cccccc---c--cccCCEEEEc
Q 036427 233 FIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLS-----TCHPTW---F--HKLVTRCYCP 301 (536)
Q Consensus 233 ~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~-----~~~~~~---~--~~~~d~vi~~ 301 (536)
.++.++.+..+.. |+|.++..-+.-+|-.+ +..+.. .+..+++| .+. .+.+.+ + .-.+|.+-..
T Consensus 136 ~FAd~i~~~~~~g--DiIWVhDYhL~L~P~ml-R~~~~~--~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFq 210 (486)
T COG0380 136 KFADKIVEIYEPG--DIIWVHDYHLLLVPQML-RERIPD--AKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQ 210 (486)
T ss_pred HHHHHHHHhcCCC--CEEEEEechhhhhHHHH-HHhCCC--ceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEec
Confidence 3444444433332 88888876665555543 433322 23333333 221 122211 1 1245666667
Q ss_pred CHHHHHHHHHh-----C------C-------CCCCEEEeCCCCCCCCCCCC----C---chHHHHHHcCCCCCCCEEEEe
Q 036427 302 TADVAKRAMKA-----G------L-------QASQIKVYGLPVRPSFVKPV----R---PKVELRRELGMDEDLPAVLLM 356 (536)
Q Consensus 302 S~~~~~~l~~~-----g------~-------~~~ki~vignpv~~~~~~~~----~---~~~~~r~~lgi~~~~~~il~~ 356 (536)
++..++.+... + + ...++...+.++|+..+... . .-.++++.++ .++++|+.+
T Consensus 211 t~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~--~~~kiivgv 288 (486)
T COG0380 211 TESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELG--RNKKLIVGV 288 (486)
T ss_pred CHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhc--CCceEEEEe
Confidence 77766665431 1 0 01234456667776554321 1 1234555543 335666666
Q ss_pred cCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCC-----HH---HHHHHHcC-----------CCCCCEEEecC-
Q 036427 357 GGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRN-----KK---LANKLLST-----------DWKIPVQVKGF- 416 (536)
Q Consensus 357 gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~-----~~---l~~~l~~~-----------~~~~~V~~~G~- 416 (536)
-+....+++.+-+.++.+.+.+-.....++. ++..... ++ +...++.. ++ .+|.++-.
T Consensus 289 DRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvv-liQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~-~Pv~~l~~~ 366 (486)
T COG0380 289 DRLDYSKGIPQRLLAFERLLEEYPEWRGKVV-LLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSW-TPVHYLHRD 366 (486)
T ss_pred hhcccccCcHHHHHHHHHHHHhChhhhCceE-EEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCc-ceeEEEecc
Confidence 6665567777766766665542111112222 3333321 12 22222211 22 34555544
Q ss_pred h--hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCC----cEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHH
Q 036427 417 V--SKMEEAMGACDCIITKA---G-PGTIAEAMIRGL----PIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANM 484 (536)
Q Consensus 417 v--~~l~~ll~~aDv~V~~s---G-~~tllEAma~Gl----PVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~ 484 (536)
+ +++..+|..||+.+..+ | -++..|+.+|-- |.|.+.. .|.+..|.+ ..+++ |.++++++
T Consensus 367 ~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeF-----aGaa~~L~~---AliVNP~d~~~va~a 438 (486)
T COG0380 367 LDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEF-----AGAASELRD---ALIVNPWDTKEVADA 438 (486)
T ss_pred CCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEecc-----ccchhhhcc---CEeECCCChHHHHHH
Confidence 2 48899999999988877 5 678889888743 5555543 223333332 55665 99999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 485 VSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 485 I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|...|+|.++.+++--+.-.+....+.+.++++..++-+++
T Consensus 439 i~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 439 IKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 99999988888877777777778888888888887665554
No 171
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=97.40 E-value=0.045 Score=55.36 Aligned_cols=233 Identities=12% Similarity=0.038 Sum_probs=124.9
Q ss_pred HHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEE--ecCCCCccc-----------ccccccCCEEEEc
Q 036427 235 AREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTV--ITDLSTCHP-----------TWFHKLVTRCYCP 301 (536)
Q Consensus 235 ~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~--~~d~~~~~~-----------~~~~~~~d~vi~~ 301 (536)
+..+.+..+..+-+-++.|+-+-..+ .++-..|....-.++.+ ..|+..... +...+.+..|++.
T Consensus 67 a~avi~~a~~~r~~kff~HGqFn~~l--wlaLl~g~~~~~k~~WhIWGaDLYe~~~~~k~rlfy~lRr~aq~rvg~V~at 144 (360)
T PF07429_consen 67 AQAVIAKAKADRADKFFLHGQFNPWL--WLALLFGKIKLKKCYWHIWGADLYEDSRSLKFRLFYFLRRLAQKRVGHVFAT 144 (360)
T ss_pred HHHHHHHHhhCccceEEEeccCcHHH--HHHHHcCCccccceEEEEeCchhhccccccchhHHHHHHHHHHhhcCeEEEE
Confidence 34454555667888888888664332 22223342221233333 345432111 1123455567654
Q ss_pred CHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCC-CcHHHHHHHHHHHhhhc
Q 036427 302 TADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGM-GPIEATARALGNALYDE 379 (536)
Q Consensus 302 S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~-k~~~~~l~al~~~l~~~ 379 (536)
+.....+.+ ++..+......|..+++........ ...+.+.-+.+|-+... .+..+.+.++.+..
T Consensus 145 -~GDl~~~~q~~~~~~~~~lyfPt~m~~~~~~~~~~---------~~~~~~ltILvGNSgd~sNnHieaL~~L~~~~--- 211 (360)
T PF07429_consen 145 -RGDLAYFQQRYPRVPASLLYFPTRMDPALTLSEKN---------KKNKGKLTILVGNSGDPSNNHIEALEALKQQF--- 211 (360)
T ss_pred -cchHHHHHHHcCCCCceEEEcCCCCchhhhccccc---------cCCCCceEEEEcCCCCCCccHHHHHHHHHHhc---
Confidence 444455554 4322333333444444432221110 11223445566776554 33556677776543
Q ss_pred ccCCCCcEEEEEecCC---HHHHHHHHcC----CCCCCEEEe-cCh--hhHHHHHhhcCeEEECC----ChHHHHHHHHh
Q 036427 380 NLGEPIGQVLVICGRN---KKLANKLLST----DWKIPVQVK-GFV--SKMEEAMGACDCIITKA----GPGTIAEAMIR 445 (536)
Q Consensus 380 ~~~~~~~~~lvi~G~~---~~l~~~l~~~----~~~~~V~~~-G~v--~~l~~ll~~aDv~V~~s----G~~tllEAma~ 445 (536)
..+.++++-.|-+ +++.+++.+. -..+++.++ .+. ++.-++++.||+.+... |-++++-.+.+
T Consensus 212 ---~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~ 288 (360)
T PF07429_consen 212 ---GDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQL 288 (360)
T ss_pred ---CCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHc
Confidence 3456766655543 3455444432 223467654 455 58899999999999876 56789999999
Q ss_pred CCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhC
Q 036427 446 GLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFG 490 (536)
Q Consensus 446 GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~ 490 (536)
|+||+......- ...+.+.|.-++.. |...+.++=+++..
T Consensus 289 G~~v~L~~~np~-----~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 289 GKKVFLSRDNPF-----WQDLKEQGIPVLFYGDELDEALVREAQRQLAN 332 (360)
T ss_pred CCeEEEecCChH-----HHHHHhCCCeEEeccccCCHHHHHHHHHHHhh
Confidence 999999875332 33477777666553 44555444444433
No 172
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=97.30 E-value=0.03 Score=60.02 Aligned_cols=177 Identities=14% Similarity=0.100 Sum_probs=109.3
Q ss_pred HHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEE----ecCCHHHHHHHHcCCCC-CCEEEe
Q 036427 340 LRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVI----CGRNKKLANKLLSTDWK-IPVQVK 414 (536)
Q Consensus 340 ~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi----~G~~~~l~~~l~~~~~~-~~V~~~ 414 (536)
.|..++++++..++ ....- -.|-..+.+....+.++ +-|+..+++. +|+ ...+....+.++. ++|.|.
T Consensus 749 ~r~~y~Lp~d~vvf-~~FNq-LyKidP~~l~~W~~ILk----~VPnS~LwllrfPa~ge-~rf~ty~~~~Gl~p~riifs 821 (966)
T KOG4626|consen 749 TRSQYGLPEDAVVF-CNFNQ-LYKIDPSTLQMWANILK----RVPNSVLWLLRFPAVGE-QRFRTYAEQLGLEPDRIIFS 821 (966)
T ss_pred CCCCCCCCCCeEEE-eechh-hhcCCHHHHHHHHHHHH----hCCcceeEEEeccccch-HHHHHHHHHhCCCccceeec
Confidence 45678898875332 22221 12333455555555554 2355544443 343 2466667777764 578887
Q ss_pred cCh--hhHHHHHhhcCeEEECC---ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHH
Q 036427 415 GFV--SKMEEAMGACDCIITKA---GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQW 488 (536)
Q Consensus 415 G~v--~~l~~ll~~aDv~V~~s---G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~l 488 (536)
+-. ++=-.-...+|+.+=.. |..|-+|.+.+|+|+|..|....-..-.+..+...|+|-++ ++.++..+.--+|
T Consensus 822 ~va~k~eHvrr~~LaDv~LDTplcnGhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak~~eEY~~iaV~L 901 (966)
T KOG4626|consen 822 PVAAKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAKNREEYVQIAVRL 901 (966)
T ss_pred cccchHHHHHhhhhhhhcccCcCcCCcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhhhHHHHHHHHHHh
Confidence 754 23344556788866443 77888999999999999996432222234456677888765 5888888877788
Q ss_pred hCCCHHHHHHHHHHHHHhc--CC-chHHHHHHHHHHHHh
Q 036427 489 FGPKIDELKAMSQNALKLA--RP-DAVFRIVQDLHELVR 524 (536)
Q Consensus 489 l~~d~~~~~~m~~~a~~~a--~~-~~~~~i~~~i~~l~~ 524 (536)
-. |.+.++++...-+... .+ +...+.+..++++..
T Consensus 902 at-d~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~ 939 (966)
T KOG4626|consen 902 AT-DKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYL 939 (966)
T ss_pred hc-CHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHH
Confidence 77 8888888887665532 22 455555666655544
No 173
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=97.24 E-value=0.0017 Score=57.42 Aligned_cols=107 Identities=14% Similarity=0.160 Sum_probs=58.8
Q ss_pred eEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccch
Q 036427 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQS 225 (536)
Q Consensus 146 KIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~ 225 (536)
|||+++... .+ ....+++.|.+. |++|.+.+...+... +.. ......... . .+. +.
T Consensus 1 KIl~i~~~~-~~---~~~~~~~~L~~~---g~~V~ii~~~~~~~~---------~~~-~~~i~~~~~--~--~~~---k~ 56 (139)
T PF13477_consen 1 KILLIGNTP-ST---FIYNLAKELKKR---GYDVHIITPRNDYEK---------YEI-IEGIKVIRL--P--SPR---KS 56 (139)
T ss_pred CEEEEecCc-HH---HHHHHHHHHHHC---CCEEEEEEcCCCchh---------hhH-hCCeEEEEe--c--CCC---Cc
Confidence 688888765 33 466889999998 889988776332100 000 011001111 0 000 00
Q ss_pred hhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHH-HHHHHcCCCCCceEEEEecC
Q 036427 226 NFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPL-RILRAKGLLKKIVFTTVITD 282 (536)
Q Consensus 226 ~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~-~~~~~~g~~~~ip~v~~~~d 282 (536)
.. .... ..++.+++++.+||+||++.+....+.. .+.+..+ .+|++...++
T Consensus 57 ~~--~~~~-~~~l~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~---~~~~i~~~hg 108 (139)
T PF13477_consen 57 PL--NYIK-YFRLRKIIKKEKPDVIHCHTPSPYGLFAMLAKKLLK---NKKVIYTVHG 108 (139)
T ss_pred cH--HHHH-HHHHHHHhccCCCCEEEEecCChHHHHHHHHHHHcC---CCCEEEEecC
Confidence 11 1112 2488899999999999999876433322 2333333 3788766664
No 174
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=97.05 E-value=0.012 Score=54.81 Aligned_cols=163 Identities=13% Similarity=0.031 Sum_probs=83.3
Q ss_pred CceEEEEeC-C---CCchHHHHHHHHHHHHHhccCCceEEEEeeccccc--CCCCCCcchhHHHHHHhhccccceeecCC
Q 036427 144 PKKVLILMS-D---TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDH--TPWPFNQLPRSYNFLVKHGPLWKMTYYGT 217 (536)
Q Consensus 144 ~mKIL~~~~-~---~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~--~~~~~~~~~~~y~~~~~~~~l~~~~~~~~ 217 (536)
|+||+|+.+ | .-||-++.+..|+..|.++ +++|+|....... ....+++.. +.......
T Consensus 1 mkkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~---g~~v~Vyc~~~~~~~~~~~y~gv~-----------l~~i~~~~- 65 (185)
T PF09314_consen 1 MKKIAIIGTRGIPARYGGFETFVEELAPRLVSK---GIDVTVYCRSDYYPYKEFEYNGVR-----------LVYIPAPK- 65 (185)
T ss_pred CceEEEEeCCCCCcccCcHHHHHHHHHHHHhcC---CceEEEEEccCCCCCCCcccCCeE-----------EEEeCCCC-
Confidence 578999853 2 2389999999999999998 7777776543221 111111111 11110000
Q ss_pred CcccccchhhhhhhHHHHHHHHHHHHh--hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCccccc-----
Q 036427 218 APRVIHQSNFAATSTFIAREVAKGLMK--YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTW----- 290 (536)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~----- 290 (536)
....... ...........+.++. .+.|+|+..+.....+.+.+.++.... .+++++-.+.+.....+|
T Consensus 66 -~g~~~si---~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~-g~~v~vN~DGlEWkR~KW~~~~k 140 (185)
T PF09314_consen 66 -NGSAESI---IYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKK-GGKVVVNMDGLEWKRAKWGRPAK 140 (185)
T ss_pred -CCchHHH---HHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhc-CCcEEECCCcchhhhhhcCHHHH
Confidence 0000000 0111111122222332 357899887754222212223332111 146655554443222222
Q ss_pred ---------ccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCC
Q 036427 291 ---------FHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVR 327 (536)
Q Consensus 291 ---------~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~ 327 (536)
..+.+|.+++.|+...+.+.+..- ..+..+++++.|
T Consensus 141 ~~lk~~E~~avk~ad~lIaDs~~I~~y~~~~y~-~~~s~~IaYGad 185 (185)
T PF09314_consen 141 KYLKFSEKLAVKYADRLIADSKGIQDYIKERYG-RKKSTFIAYGAD 185 (185)
T ss_pred HHHHHHHHHHHHhCCEEEEcCHHHHHHHHHHcC-CCCcEEecCCCC
Confidence 357999999999999999877422 345667777643
No 175
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=96.24 E-value=1.3 Score=43.10 Aligned_cols=42 Identities=21% Similarity=0.343 Sum_probs=30.4
Q ss_pred HHHHHHHHhhCCCEEE-EcCcccchH---HHHHHHHcCCCCCceEEEEec
Q 036427 236 REVAKGLMKYQPDIII-SVHPLMQHV---PLRILRAKGLLKKIVFTTVIT 281 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi-~~~~~~~~i---~~~~~~~~g~~~~ip~v~~~~ 281 (536)
..+.++|++++.|++| .+||+...+ .+.+++..| ||++-+..
T Consensus 56 e~l~~~l~e~~i~llIDATHPyAa~iS~Na~~aake~g----ipy~r~eR 101 (257)
T COG2099 56 EGLAAFLREEGIDLLIDATHPYAARISQNAARAAKETG----IPYLRLER 101 (257)
T ss_pred HHHHHHHHHcCCCEEEECCChHHHHHHHHHHHHHHHhC----CcEEEEEC
Confidence 4788999999999998 578876443 345556555 89876543
No 176
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=96.22 E-value=0.025 Score=49.15 Aligned_cols=94 Identities=15% Similarity=0.161 Sum_probs=67.4
Q ss_pred cEEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCC-------
Q 036427 386 GQVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA------- 456 (536)
Q Consensus 386 ~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~------- 456 (536)
-++++..|+++-. . . ...++.||. +++..+.+.|.++|+++|-++++.++..++|.|+.+...
T Consensus 31 e~lIvQyGn~d~k-p------v-agl~v~~F~~~~kiQsli~darIVISHaG~GSIL~~~rl~kplIv~pr~s~y~elvD 102 (161)
T COG5017 31 EELIVQYGNGDIK-P------V-AGLRVYGFDKEEKIQSLIHDARIVISHAGEGSILLLLRLDKPLIVVPRSSQYQELVD 102 (161)
T ss_pred hheeeeecCCCcc-c------c-cccEEEeechHHHHHHHhhcceEEEeccCcchHHHHhhcCCcEEEEECchhHHHhhh
Confidence 4578889987511 1 1 125666665 699999999999999999999999999999999999743
Q ss_pred ccccCChhhHhhCCceeecCCHHH-HHHHHHH
Q 036427 457 GQEAGNVPYVVENGCGKFSKSPKE-IANMVSQ 487 (536)
Q Consensus 457 ~~e~~na~~lv~~g~g~~~~d~~~-La~~I~~ 487 (536)
+++..-+..+.+.+.-+.+.+.+. |.+.++.
T Consensus 103 dHQvela~klae~~~vv~~spte~~L~a~l~~ 134 (161)
T COG5017 103 DHQVELALKLAEINYVVACSPTELVLQAGLQV 134 (161)
T ss_pred hHHHHHHHHHHhcCceEEEcCCchhhHHhHhh
Confidence 455445666777777776654433 4444433
No 177
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=96.13 E-value=0.022 Score=50.25 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=29.5
Q ss_pred EEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 147 VLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 147 IL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
|+|++.++ +||..+.++|+++|+++ ||+|.+...
T Consensus 1 Ili~~~Gt-~Ghv~P~lala~~L~~r---Gh~V~~~~~ 34 (139)
T PF03033_consen 1 ILIATGGT-RGHVYPFLALARALRRR---GHEVRLATP 34 (139)
T ss_dssp EEEEEESS-HHHHHHHHHHHHHHHHT---T-EEEEEET
T ss_pred CEEEEcCC-hhHHHHHHHHHHHHhcc---CCeEEEeec
Confidence 78899999 89999999999999999 889977643
No 178
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=95.75 E-value=0.56 Score=52.09 Aligned_cols=169 Identities=11% Similarity=0.072 Sum_probs=105.4
Q ss_pred CCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCC--CCcEEEEEecCCH-------HHHHHHHcC----CCCCCEE
Q 036427 346 MDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGE--PIGQVLVICGRNK-------KLANKLLST----DWKIPVQ 412 (536)
Q Consensus 346 i~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~--~~~~~lvi~G~~~-------~l~~~l~~~----~~~~~V~ 412 (536)
++++.+++.++.+...+|...-++..+. .+.+. +.+ .+.+ +++.|++. ++.+.+.+. ....+|.
T Consensus 385 ~dpd~~~ig~v~Rl~~yKr~dLil~~i~-~l~~i-~~~~~~pvq-~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~ 461 (601)
T TIGR02094 385 LDPDVLTIGFARRFATYKRADLIFRDLE-RLARI-LNNPERPVQ-IVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIV 461 (601)
T ss_pred cCCCCcEEEEEEcchhhhhHHHHHHHHH-HHHHH-hhCCCCCeE-EEEEEecCcccchHHHHHHHHHHHHhcccCCCCEE
Confidence 4567778888888888777655444333 33211 012 3454 56678764 244444332 2445666
Q ss_pred E-ecChh-hHHHHHhhcCeEEE-CC-----ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--------
Q 036427 413 V-KGFVS-KMEEAMGACDCIIT-KA-----GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-------- 476 (536)
Q Consensus 413 ~-~G~v~-~l~~ll~~aDv~V~-~s-----G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-------- 476 (536)
| .+|-. --..+++.||+.+. |+ -|++-+=||..|.+.+.+--+...| ..+.+.|+.+.
T Consensus 462 f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E------~~~~~nGf~f~~~~~~~~~ 535 (601)
T TIGR02094 462 FLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGE------GYDGDNGWAIGDGEEYDDE 535 (601)
T ss_pred EEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccc------cCCCCcEEEECCCcccccc
Confidence 6 45543 34566799999999 76 1567778999999999986432222 12345566543
Q ss_pred ------CHHHHHHHHHHHh----CCC-----HHHHHHHHHHHHHh-cCCchHHHHHHHHHHHH
Q 036427 477 ------SPKEIANMVSQWF----GPK-----IDELKAMSQNALKL-ARPDAVFRIVQDLHELV 523 (536)
Q Consensus 477 ------d~~~La~~I~~ll----~~d-----~~~~~~m~~~a~~~-a~~~~~~~i~~~i~~l~ 523 (536)
|.++|.++|++.+ ..+ |....+|.++|.+. +..++|.+.++++.++.
T Consensus 536 ~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 536 EEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 5777888776544 213 45577888887775 45799999999998764
No 179
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=95.70 E-value=0.44 Score=46.41 Aligned_cols=102 Identities=15% Similarity=0.075 Sum_probs=55.5
Q ss_pred CCCCEEE-EecCCCCCCcH-HHHHHHHHHHhhhcccCCCCcEEEEEecCCHH-HHHH---HHcCCCCCCEEEecCh--hh
Q 036427 348 EDLPAVL-LMGGGEGMGPI-EATARALGNALYDENLGEPIGQVLVICGRNKK-LANK---LLSTDWKIPVQVKGFV--SK 419 (536)
Q Consensus 348 ~~~~~il-~~gg~~g~k~~-~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~-l~~~---l~~~~~~~~V~~~G~v--~~ 419 (536)
.+++.|+ ..|++...+.. .+.+.++++.+. .....++++ |...+ ..+. +.+......+.+.|.. .+
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~-----~~~~~vvl~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e 176 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLK-----ERGYRVVLL-GGPEEQEKEIADQIAAGLQNPVINLAGKTSLRE 176 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHC-----CCT-EEEE---SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHH
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHH-----hhCceEEEE-ccchHHHHHHHHHHHHhcccceEeecCCCCHHH
Confidence 3445554 45554444443 456777777775 223555444 44443 2222 2222112257777764 58
Q ss_pred HHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCC
Q 036427 420 MEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA 456 (536)
Q Consensus 420 l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~ 456 (536)
+..+++.||++|+.-. +.+.=|.+.|+|+|++=...
T Consensus 177 ~~ali~~a~~~I~~Dt-g~~HlA~a~~~p~v~lfg~t 212 (247)
T PF01075_consen 177 LAALISRADLVIGNDT-GPMHLAAALGTPTVALFGPT 212 (247)
T ss_dssp HHHHHHTSSEEEEESS-HHHHHHHHTT--EEEEESSS
T ss_pred HHHHHhcCCEEEecCC-hHHHHHHHHhCCEEEEecCC
Confidence 9999999999998743 23455999999999985443
No 180
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=95.67 E-value=2.5 Score=41.73 Aligned_cols=53 Identities=15% Similarity=0.164 Sum_probs=35.6
Q ss_pred hcCeEEEC-CC-----hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHh
Q 036427 426 ACDCIITK-AG-----PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWF 489 (536)
Q Consensus 426 ~aDv~V~~-sG-----~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll 489 (536)
.+|++|+. || .-.+--|..+|+|||++..+.... ....+.+.+++.+.+++++
T Consensus 197 ~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~-----------~~~~~~~~~el~~~l~~~~ 255 (256)
T TIGR00715 197 RIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP-----------GVAIFDDISQLNQFVARLL 255 (256)
T ss_pred CCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC-----------CCccCCCHHHHHHHHHHhc
Confidence 57889987 43 235556899999999999764211 1123458888888777654
No 181
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=95.35 E-value=2.9 Score=40.51 Aligned_cols=152 Identities=12% Similarity=0.091 Sum_probs=75.9
Q ss_pred ccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCC-CCCCcHHHHH
Q 036427 291 FHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGG-EGMGPIEATA 369 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~-~g~k~~~~~l 369 (536)
+.+.++.+.+-.+...+.+.+.|++. ++.+++-++. ...+..+...... .....+.+.... .......+.+
T Consensus 124 ~l~~~~~i~vRD~~S~~~l~~~g~~~-~~~~~~D~af--~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 195 (286)
T PF04230_consen 124 ILSKADYISVRDEYSYELLKKLGISG-NVKLVPDPAF--LLPPSYPDEDKSK-----PKRNYISVSNSPSRNNEEYIEEI 195 (286)
T ss_pred HHhCCCEEEECCHHHHHHHHHcCCCC-CcEEEeCchh--hcCcccccccccc-----cccceeeeccccchhhhhHHHHH
Confidence 45568899999999988788888875 7888876653 1111111110000 011112122111 1122223333
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHc----CCCCCCEEEecCh---hhHHHHHhhcCeEEECCChHHHHH
Q 036427 370 RALGNALYDENLGEPIGQVLVICGRNK-KLANKLLS----TDWKIPVQVKGFV---SKMEEAMGACDCIITKAGPGTIAE 441 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~----~~~~~~V~~~G~v---~~l~~ll~~aDv~V~~sG~~tllE 441 (536)
..+...+.+ ......++....... ........ .....++...... .++.++++.||++|+..- ...+=
T Consensus 196 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Is~Rl-H~~I~ 271 (286)
T PF04230_consen 196 AELIQRLLD---KGYKIVLLPFSPSDDDEDDDDFNEIDIKAEKFFNVIIIDYSLSPDELLELISQADLVISMRL-HGAIL 271 (286)
T ss_pred HHHHHHhhc---ccceeEEEEeeeccchhhHHHHHhhhhhcccccceeEecCCCCHHHHHHHHhcCCEEEecCC-HHHHH
Confidence 333333321 111222222222221 11111110 2222333333332 589999999999998775 33456
Q ss_pred HHHhCCcEEEecc
Q 036427 442 AMIRGLPIILNDF 454 (536)
Q Consensus 442 Ama~GlPVI~~~~ 454 (536)
|+++|+|+|++.+
T Consensus 272 a~~~g~P~i~i~y 284 (286)
T PF04230_consen 272 ALSLGVPVIAISY 284 (286)
T ss_pred HHHcCCCEEEEec
Confidence 9999999999874
No 182
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=95.24 E-value=4.5 Score=42.03 Aligned_cols=234 Identities=12% Similarity=0.073 Sum_probs=115.2
Q ss_pred CCCEEEEcCccc--------chHH----HHHHHHcCCCCCceEEEEecCCCC-ccc--cc----ccccCCEEEEcCHHHH
Q 036427 246 QPDIIISVHPLM--------QHVP----LRILRAKGLLKKIVFTTVITDLST-CHP--TW----FHKLVTRCYCPTADVA 306 (536)
Q Consensus 246 kPDvVi~~~~~~--------~~i~----~~~~~~~g~~~~ip~v~~~~d~~~-~~~--~~----~~~~~d~vi~~S~~~~ 306 (536)
+.|++|..+... ..++ +.+++..+ .|.+.+...... .++ +| ..+.+..+.+-.+...
T Consensus 89 ~~d~~I~~Gg~l~~d~~~~~~~~~~~~~~~la~l~~----kp~~~~g~svGP~~~~~s~~~~~~~~~~~s~i~vRD~~S~ 164 (385)
T COG2327 89 KADLIIIGGGGLLQDVTSSRSIIYYGGSILLARLAG----KPTFFFGQSVGPLKHPLSRQLLNYVLGGCSAISVRDPVSY 164 (385)
T ss_pred hCCEEEEcCcccccCccccceehhhHHHHHHHHHcC----CCEEEEeccCCCccCHHHHHHHHHHhcCCcEEEEecHHhH
Confidence 589999866211 1111 22334343 788777765543 222 33 3456678888888889
Q ss_pred HHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCc---H--HHHHHHHHHHhhhccc
Q 036427 307 KRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGP---I--EATARALGNALYDENL 381 (536)
Q Consensus 307 ~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~---~--~~~l~al~~~l~~~~~ 381 (536)
+.+...|++.. ... |+-+.-+....+. ....+ ....+.+.+..+.+...+ . .+....+.+.+.. .
T Consensus 165 ~llk~~gi~a~---l~~---D~Af~L~~~~~~~-~~~~~-~~~~~~~~i~lr~~~~~~t~~~~~~~~v~~~l~~~~~--~ 234 (385)
T COG2327 165 ELLKQLGINAR---LVT---DPAFLLPASSQNA-TASDV-EAREKTVAITLRGLHPDNTAQRSILKYVNEALDLVER--Q 234 (385)
T ss_pred HHHHHcCCCeE---eec---Ccceecccccccc-ccccc-ccccceEEEEecccCCchhhhHHHHHHHHHHHHHHHH--h
Confidence 88887787642 222 3322221110000 00001 122345555555422111 1 1122222222100 0
Q ss_pred CCCCcEEEEEe-cCCH--HHHHHHHcC-CCCCCEEEecCh--hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccC
Q 036427 382 GEPIGQVLVIC-GRNK--KLANKLLST-DWKIPVQVKGFV--SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 382 ~~~~~~~lvi~-G~~~--~l~~~l~~~-~~~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~ 455 (536)
....+++..+. +..+ ...+.+..+ ....++.+..-. +++-..+++||++|..= -.+++=|++.|+|+|.+.+.
T Consensus 235 ~~~~~~i~~~~~~~s~d~~va~~ia~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg~R-~HsaI~al~~g~p~i~i~Y~ 313 (385)
T COG2327 235 VKALWRITLIDYGASDDLAVADAIAQLVLDSAEILVSSDEYAEELGGILAACDLIVGMR-LHSAIMALAFGVPAIAIAYD 313 (385)
T ss_pred hhcceEEEeeeccccchhHHHHHHHhhcCCccceEeecchHHHHHHHHhccCceEEeeh-hHHHHHHHhcCCCeEEEeec
Confidence 12333333332 2222 122333322 223556554322 35566889999988532 46678899999999999974
Q ss_pred CccccCChhhHhhCCceeec-C----CHHHHHHHHHHHhCCCHHHHHH
Q 036427 456 AGQEAGNVPYVVENGCGKFS-K----SPKEIANMVSQWFGPKIDELKA 498 (536)
Q Consensus 456 ~~~e~~na~~lv~~g~g~~~-~----d~~~La~~I~~ll~~d~~~~~~ 498 (536)
.-. .....+.|.-.++ + +.+.+.+.+.+.+...++.+++
T Consensus 314 ~K~----~~l~~~~gl~~~~~~i~~~~~~~l~~~~~e~~~~~~~~~~~ 357 (385)
T COG2327 314 PKV----RGLMQDLGLPGFAIDIDPLDAEILSAVVLERLTKLDELRER 357 (385)
T ss_pred HHH----HHHHHHcCCCcccccCCCCchHHHHHHHHHHHhccHHHHhh
Confidence 321 2234444443222 1 6777777777666635565554
No 183
>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]
Probab=95.13 E-value=2.4 Score=44.54 Aligned_cols=219 Identities=12% Similarity=0.076 Sum_probs=122.8
Q ss_pred cCCEEEEcCHHHHHHHH-HhCCCCCCEEEeCCCCCCCCCCCCCchH---HHHHHcCCCCCCCEEEEecCCCCCC------
Q 036427 294 LVTRCYCPTADVAKRAM-KAGLQASQIKVYGLPVRPSFVKPVRPKV---ELRRELGMDEDLPAVLLMGGGEGMG------ 363 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~-~~g~~~~ki~vignpv~~~~~~~~~~~~---~~r~~lgi~~~~~~il~~gg~~g~k------ 363 (536)
..|.+.+.++....-.. ..++...++..+|.|-.+.++....... .....+.++.++++|++.--..+..
T Consensus 148 ~~dy~~~~~~~~~~if~~~f~~~~~~i~~~G~Pr~D~~~~~~~~~~~~~~~~~~~~~~~~k~vIlyaPTfr~~~~~~~~~ 227 (388)
T COG1887 148 HWDYLISPNPESTAIFAEAFNIDKENILETGYPRNDKLFDEAGKTEDILLIQLALPLPQDKKVILYAPTFRDNDVLIGTQ 227 (388)
T ss_pred eeeeeeeCChhhHHHHHHHhcccccceeecCcccchhhhhhccchhhhHHHhhhcCCcccCceEEecCCccCCccccchh
Confidence 44566666666555533 3578888999999998776554332222 2234566777788888765443332
Q ss_pred cHH--HHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcC-CCCCCEEEecChhhHHHHHhhcCeEEECCChHHHH
Q 036427 364 PIE--ATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIA 440 (536)
Q Consensus 364 ~~~--~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~-~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tll 440 (536)
... ..+.++.+.+. ..+. +++.-.++...+.+... ...+.+..+..-.++.++|..+|++|+-- +.+..
T Consensus 228 ~~~~~~~~~~~~~~l~-----~~~~--~ii~k~Hp~is~~~~~~~~~~~~~~~vs~~~di~dll~~sDiLITDy-SSv~f 299 (388)
T COG1887 228 FFNLDIDIEKLKEKLG-----ENEY--VIIVKPHPLISDKIDKRYALDDFVLDVSDNADINDLLLVSDILITDY-SSVIF 299 (388)
T ss_pred hhhhhhhHHHHHHhhc-----cCCe--EEEEecChhhhhhhhhhhhccceeEecccchhHHHHHhhhCEEEeec-hHHHH
Confidence 111 12222322221 1233 34444555333333221 11222333333458999999999999853 36889
Q ss_pred HHHHhCCcEEEeccCCccc---cCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHH----HHHHHHHHHhcCCchHH
Q 036427 441 EAMIRGLPIILNDFIAGQE---AGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDEL----KAMSQNALKLARPDAVF 513 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e---~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~----~~m~~~a~~~a~~~~~~ 513 (536)
|+|..-+|||..-....+- .|-........-|-++.+.+++.++|..... +++.. +...+.........+++
T Consensus 300 df~~l~KPiify~~D~~~y~~~rg~~~d~~~~~Pg~~~~~~~~li~ai~~~~~-~~~~~~~k~~~~~~~~~~~~dg~ss~ 378 (388)
T COG1887 300 DFMLLDKPIIFYTYDLEQYDELRGFYLDYKFEAPGEVVETQEELIDAIKPYDE-DGNYDLEKLRVFNDKFNSYEDGRSSE 378 (388)
T ss_pred HHHHhcCcEEEEecChHHHHhhhhhhhhHHhcCCccccccHHHHHHHHHhhhc-ccchhHHHHHHHHHhhcccccccHHH
Confidence 9999999999986543211 1111112223345566788999999988887 43322 22333333344456777
Q ss_pred HHHHHHHH
Q 036427 514 RIVQDLHE 521 (536)
Q Consensus 514 ~i~~~i~~ 521 (536)
++++.+.+
T Consensus 379 ri~~~i~~ 386 (388)
T COG1887 379 RILKLIFK 386 (388)
T ss_pred HHHHHHhc
Confidence 77776643
No 184
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=94.96 E-value=4.6 Score=40.60 Aligned_cols=165 Identities=12% Similarity=-0.004 Sum_probs=84.6
Q ss_pred ceEEEEecCCCCcc-------cccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCC
Q 036427 274 IVFTTVITDLSTCH-------PTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGM 346 (536)
Q Consensus 274 ip~v~~~~d~~~~~-------~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi 346 (536)
.|++.+...+.... .+++.+.++.+.+-.+...+.+.+.|+ ++.+.+-++. .-+...... ..
T Consensus 100 k~~~~~g~giGP~~~~~~r~~~~~~l~~~~~i~vRD~~S~~~l~~~g~---~i~~~~D~a~---~l~~~~~~~-----~~ 168 (298)
T TIGR03609 100 KPVILWGQGIGPLRRRLSRWLVRRVLRGCRAISVRDAASYRLLKRLGI---PAELAADPVW---LLPPEPWPG-----GE 168 (298)
T ss_pred CCEEEEecccCCcCCHHHHHHHHHHHccCCEEEEeCHHHHHHHHHhCC---CceEeCChhh---hCCCCcccc-----cc
Confidence 67766655443211 123567889999989999988887787 3666554432 111100000 01
Q ss_pred CCCCCEEEEecCCCCC-C-cHHHHHHHHHHHhhhcccCCCCcEEEEEecC--CH-HHHHHHHcC-CCCCCEEEecChhhH
Q 036427 347 DEDLPAVLLMGGGEGM-G-PIEATARALGNALYDENLGEPIGQVLVICGR--NK-KLANKLLST-DWKIPVQVKGFVSKM 420 (536)
Q Consensus 347 ~~~~~~il~~gg~~g~-k-~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~--~~-~l~~~l~~~-~~~~~V~~~G~v~~l 420 (536)
..+.+.+.+..+.+.. . ...+.+..+++.+.+ ..+.+++++... .+ +..+.+.+. .....+.......++
T Consensus 169 ~~~~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~----~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~ 244 (298)
T TIGR03609 169 PLPEPVIVVSLRPWPLLDVSRLLRLLRALDRLQR----DTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEEL 244 (298)
T ss_pred cCCCCeEEEEECCCCcCCHHHHHHHHHHHHHHHH----hhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHH
Confidence 1234566665554322 1 111222222222221 224444444322 22 233334332 111223211122477
Q ss_pred HHHHhhcCeEEECCChHHHHHHHHhCCcEEEecc
Q 036427 421 EEAMGACDCIITKAGPGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 421 ~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~ 454 (536)
.++++.||++|...- ..++=|+.+|+|+|.+.+
T Consensus 245 ~~~i~~~~~vI~~Rl-H~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 245 LGLFASARLVIGMRL-HALILAAAAGVPFVALSY 277 (298)
T ss_pred HHHHhhCCEEEEech-HHHHHHHHcCCCEEEeec
Confidence 888999999998665 345669999999999864
No 185
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=94.66 E-value=0.39 Score=47.13 Aligned_cols=77 Identities=19% Similarity=0.215 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHh--hCCCEEEEcCcccchHHHHHHHHcC----CCCCceEEEEecCCCC--cc----------c------
Q 036427 233 FIAREVAKGLMK--YQPDIIISVHPLMQHVPLRILRAKG----LLKKIVFTTVITDLST--CH----------P------ 288 (536)
Q Consensus 233 ~~~~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~~g----~~~~ip~v~~~~d~~~--~~----------~------ 288 (536)
.+.+...+++++ .+|||||++.-....+|+.+ +... ...++|++..+|.... .. +
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~l-k~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~ 196 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYL-KERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQN 196 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHH-HHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-S
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHh-ccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhcc
Confidence 345566677776 68999999875444445543 4332 1234888877775431 00 0
Q ss_pred -------------ccccccCCEEEEcCHHHHHHHH
Q 036427 289 -------------TWFHKLVTRCYCPTADVAKRAM 310 (536)
Q Consensus 289 -------------~~~~~~~d~vi~~S~~~~~~l~ 310 (536)
+.-...+|.+.++|+..++.+.
T Consensus 197 ~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~ 231 (245)
T PF08323_consen 197 LDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQ 231 (245)
T ss_dssp TTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTT
T ss_pred ccccccccccCHHHHHHHhcCEeeeCCHHHHHHHh
Confidence 0012478899999999888764
No 186
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=93.91 E-value=0.59 Score=46.43 Aligned_cols=46 Identities=20% Similarity=0.192 Sum_probs=36.6
Q ss_pred CCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEecc
Q 036427 408 KIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 408 ~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~ 454 (536)
..++.+...-.++.+++..||.+|+-++ .+-+||+.+|+|||+...
T Consensus 181 ~~~~~~~~~~~~~~~Ll~~s~~VvtinS-tvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 181 LPNVVIIDDDVNLYELLEQSDAVVTINS-TVGLEALLHGKPVIVFGR 226 (269)
T ss_pred CCCeEEECCCCCHHHHHHhCCEEEEECC-HHHHHHHHcCCceEEecC
Confidence 3456665555588999999999998754 577999999999999764
No 187
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=93.61 E-value=7.9 Score=38.01 Aligned_cols=44 Identities=20% Similarity=0.299 Sum_probs=30.3
Q ss_pred HHHHHHHHhhCCCEEE-EcCcccchHH---HHHHHHcCCCCCceEEEEecCC
Q 036427 236 REVAKGLMKYQPDIII-SVHPLMQHVP---LRILRAKGLLKKIVFTTVITDL 283 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi-~~~~~~~~i~---~~~~~~~g~~~~ip~v~~~~d~ 283 (536)
..+.++|++.++|+|| ++||+...+. ..+++..| ||++-+....
T Consensus 56 ~~l~~~l~~~~i~~vIDATHPfA~~is~na~~a~~~~~----ipylR~eRp~ 103 (249)
T PF02571_consen 56 EGLAEFLRENGIDAVIDATHPFAAEISQNAIEACRELG----IPYLRFERPS 103 (249)
T ss_pred HHHHHHHHhCCCcEEEECCCchHHHHHHHHHHHHhhcC----cceEEEEcCC
Confidence 4778899999999998 5888865442 23344444 8987665543
No 188
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=93.11 E-value=3 Score=47.60 Aligned_cols=169 Identities=11% Similarity=0.052 Sum_probs=97.0
Q ss_pred CCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccC-CCCcEEEEEecCCH-------HHHHHHHcC----CCCCCEEE
Q 036427 346 MDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLG-EPIGQVLVICGRNK-------KLANKLLST----DWKIPVQV 413 (536)
Q Consensus 346 i~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~-~~~~~~lvi~G~~~-------~l~~~l~~~----~~~~~V~~ 413 (536)
++++..++.++.+...+|...-++..+. .+.++... ..+++ +|++|++. ++.+.+.+. ....+|.|
T Consensus 474 ldpd~ltigfarRfa~YKR~~Lil~dl~-rl~~il~~~~~pvQ-~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvf 551 (778)
T cd04299 474 LDPNVLTIGFARRFATYKRATLLLRDPE-RLKRLLNDPERPVQ-FIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVF 551 (778)
T ss_pred cCCCccEEeeeecchhhhhHHHHHHHHH-HHHHHhhCCCCCeE-EEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEE
Confidence 4455667777777777777554443332 22211101 13444 56678764 233333322 33456766
Q ss_pred e-cChhh-HHHHHhhcCeEEECC------ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC---------
Q 036427 414 K-GFVSK-MEEAMGACDCIITKA------GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--------- 476 (536)
Q Consensus 414 ~-G~v~~-l~~ll~~aDv~V~~s------G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--------- 476 (536)
+ +|-.. -..+++.||+.+.+| -|++=+=||.-|.+.+.+--+-..| .-+.+.|+.+.
T Consensus 552 le~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E------~~~g~nGwaig~~~~~~~~~ 625 (778)
T cd04299 552 LEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDE------GYDGENGWAIGDGDEYEDDE 625 (778)
T ss_pred EcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccc------ccCCCCceEeCCCccccChh
Confidence 4 44333 456679999999886 1455567899999999987433233 22334455542
Q ss_pred -----CHHHHHHHHHH----HhCCC-----HHHHHHHHHHHHH-hcCCchHHHHHHHHHHH
Q 036427 477 -----SPKEIANMVSQ----WFGPK-----IDELKAMSQNALK-LARPDAVFRIVQDLHEL 522 (536)
Q Consensus 477 -----d~~~La~~I~~----ll~~d-----~~~~~~m~~~a~~-~a~~~~~~~i~~~i~~l 522 (536)
|.++|.+.|++ ++-.. |....+|.+++.+ .+..+++.++++++.+-
T Consensus 626 ~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~ 686 (778)
T cd04299 626 YQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVER 686 (778)
T ss_pred hcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 34555555543 22102 5667777777766 45668999998888653
No 189
>PRK06849 hypothetical protein; Provisional
Probab=87.50 E-value=2.9 Score=43.91 Aligned_cols=84 Identities=18% Similarity=0.228 Sum_probs=50.6
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
.++||||++..+. ..++.+++.|.+. |++|++++..... .. .+...... .+. .+.+..
T Consensus 2 ~~~~~VLI~G~~~-----~~~l~iar~l~~~---G~~Vi~~d~~~~~-------~~-~~s~~~d~--~~~----~p~p~~ 59 (389)
T PRK06849 2 NTKKTVLITGARA-----PAALELARLFHNA---GHTVILADSLKYP-------LS-RFSRAVDG--FYT----IPSPRW 59 (389)
T ss_pred CCCCEEEEeCCCc-----HHHHHHHHHHHHC---CCEEEEEeCCchH-------HH-HHHHhhhh--eEE----eCCCCC
Confidence 4568999986655 3688999999998 8899998764321 00 01000110 011 000110
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCc
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~ 255 (536)
....+...+.++++++++|+|+....
T Consensus 60 --------d~~~~~~~L~~i~~~~~id~vIP~~e 85 (389)
T PRK06849 60 --------DPDAYIQALLSIVQRENIDLLIPTCE 85 (389)
T ss_pred --------CHHHHHHHHHHHHHHcCCCEEEECCh
Confidence 12234467788899999999998765
No 190
>TIGR03646 YtoQ_fam YtoQ family protein. Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=81.77 E-value=10 Score=33.01 Aligned_cols=66 Identities=14% Similarity=0.144 Sum_probs=42.1
Q ss_pred hHHHHHhhcCeEEECCC-----hHHHHH---HHHhCCcEEEeccCCccccCChhhHhhCC--ceeecCCHHHHHHHHHHH
Q 036427 419 KMEEAMGACDCIITKAG-----PGTIAE---AMIRGLPIILNDFIAGQEAGNVPYVVENG--CGKFSKSPKEIANMVSQW 488 (536)
Q Consensus 419 ~l~~ll~~aDv~V~~sG-----~~tllE---Ama~GlPVI~~~~~~~~e~~na~~lv~~g--~g~~~~d~~~La~~I~~l 488 (536)
....++..||++|..-| .++.+. |.++|+|.|+.-....+- .|.+-. .-.+++++++..+.+..+
T Consensus 68 RT~~li~~aDvvVvrFGekYKQWNaAfDAg~aaAlgKplI~lh~~~~~H-----pLKEvdaaA~avaetp~Qvv~iL~Yv 142 (144)
T TIGR03646 68 RTRKLIEKADVVIALFGEKYKQWNAAFDAGYAAALGKPLIILRPEELIH-----PLKEVDNKAQAVVETPEQAIETLKYI 142 (144)
T ss_pred HHHHHHhhCCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEecchhccc-----cHHHHhHHHHHHhcCHHHHHHHHHHh
Confidence 35678999999998864 355554 789999999987543211 122221 222345777777777665
Q ss_pred h
Q 036427 489 F 489 (536)
Q Consensus 489 l 489 (536)
+
T Consensus 143 ~ 143 (144)
T TIGR03646 143 L 143 (144)
T ss_pred h
Confidence 4
No 191
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=81.01 E-value=32 Score=31.89 Aligned_cols=46 Identities=26% Similarity=0.343 Sum_probs=31.6
Q ss_pred CEEEecChhhHHHHHhhcCeEEE-CCChHHHHHHHHh---------CCcEEEeccC
Q 036427 410 PVQVKGFVSKMEEAMGACDCIIT-KAGPGTIAEAMIR---------GLPIILNDFI 455 (536)
Q Consensus 410 ~V~~~G~v~~l~~ll~~aDv~V~-~sG~~tllEAma~---------GlPVI~~~~~ 455 (536)
.+.+....+....++..||++|. |+|.+|+-|.+.. .+|+++.+..
T Consensus 80 ~i~~~~~~~Rk~~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n~~ 135 (178)
T TIGR00730 80 LIEVNGMHERKAMMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFNVN 135 (178)
T ss_pred eEEECCHHHHHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEECCc
Confidence 34444444566788899998766 4457888774332 9999998853
No 192
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=79.28 E-value=29 Score=34.10 Aligned_cols=53 Identities=17% Similarity=0.239 Sum_probs=34.9
Q ss_pred hcCeEEEC-CCh----HHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHh
Q 036427 426 ACDCIITK-AGP----GTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWF 489 (536)
Q Consensus 426 ~aDv~V~~-sG~----~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll 489 (536)
.+|++|+. ||+ -.+--|..+|+|||++..+.... ....+.+.+++.+.+.+++
T Consensus 190 ~i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~~-----------~~~~~~~~~e~~~~l~~~~ 247 (248)
T PRK08057 190 RIDVVVTKNSGGAGTEAKLEAARELGIPVVMIARPALPY-----------ADREFEDVAELVAWLRHLL 247 (248)
T ss_pred CCCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCCC-----------CCcccCCHHHHHHHHHHhh
Confidence 56788987 443 34445889999999998754211 1123457888887777654
No 193
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=79.01 E-value=4.9 Score=34.81 Aligned_cols=65 Identities=12% Similarity=0.172 Sum_probs=42.8
Q ss_pred HHHHHhhcCeEEECCC-----hHHHHH---HHHhCCcEEEeccCCccccCChhhHhhC--CceeecCCHHHHHHHHHHHh
Q 036427 420 MEEAMGACDCIITKAG-----PGTIAE---AMIRGLPIILNDFIAGQEAGNVPYVVEN--GCGKFSKSPKEIANMVSQWF 489 (536)
Q Consensus 420 l~~ll~~aDv~V~~sG-----~~tllE---Ama~GlPVI~~~~~~~~e~~na~~lv~~--g~g~~~~d~~~La~~I~~ll 489 (536)
...++..||++|..-| .++.+. |.++|+|.|+.-....+- -|.+- ..-.+++++++..+.+..++
T Consensus 66 T~~li~~aDvVVvrFGekYKQWNaAfDAg~a~AlgKplI~lh~~~~~H-----pLKEvda~A~a~~et~~Qvv~iL~Yv~ 140 (141)
T PF11071_consen 66 TRTLIEKADVVVVRFGEKYKQWNAAFDAGYAAALGKPLITLHPEELHH-----PLKEVDAAALAVAETPEQVVEILRYVL 140 (141)
T ss_pred HHHHHhhCCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEecchhccc-----cHHHHhHhhHhhhCCHHHHHHHHHHHh
Confidence 4578899999998754 355554 789999999987543211 13322 22334568888888877765
No 194
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=78.72 E-value=42 Score=32.81 Aligned_cols=39 Identities=23% Similarity=0.235 Sum_probs=29.7
Q ss_pred ceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
||++.+.+- =|-|..+.+.+||.+|.+. |..|+++|+..
T Consensus 1 M~~iai~s~kGGvG~TTltAnLA~aL~~~---G~~VlaID~dp 40 (243)
T PF06564_consen 1 MKVIAIVSPKGGVGKTTLTANLAWALARL---GESVLAIDLDP 40 (243)
T ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHHC---CCcEEEEeCCc
Confidence 455555443 3348899999999999999 88999998754
No 195
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=77.43 E-value=1e+02 Score=32.64 Aligned_cols=137 Identities=18% Similarity=0.273 Sum_probs=70.6
Q ss_pred HHHHHcC-CCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHH-HHHcCCCCCCEEEecC
Q 036427 339 ELRRELG-MDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLAN-KLLSTDWKIPVQVKGF 416 (536)
Q Consensus 339 ~~r~~lg-i~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~-~l~~~~~~~~V~~~G~ 416 (536)
.+++.++ +.. ..++++|-+ ++...+++.+. ..++.-+.|+....+-.+ ..++.+ .... .
T Consensus 168 lA~~~~~~L~~--~~vlvIGAG-------em~~lva~~L~-----~~g~~~i~IaNRT~erA~~La~~~~----~~~~-~ 228 (414)
T COG0373 168 LAKRIFGSLKD--KKVLVIGAG-------EMGELVAKHLA-----EKGVKKITIANRTLERAEELAKKLG----AEAV-A 228 (414)
T ss_pred HHHHHhccccc--CeEEEEccc-------HHHHHHHHHHH-----hCCCCEEEEEcCCHHHHHHHHHHhC----Ceee-c
Confidence 3445555 332 356666553 22333344443 244455777787753222 233333 1111 2
Q ss_pred hhhHHHHHhhcCeEEECCC-h------HHHHHHHHhCCcEEEeccCCccccCChhhHhhCCc----eeecCCHHHHHHHH
Q 036427 417 VSKMEEAMGACDCIITKAG-P------GTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGC----GKFSKSPKEIANMV 485 (536)
Q Consensus 417 v~~l~~ll~~aDv~V~~sG-~------~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~----g~~~~d~~~La~~I 485 (536)
.+++..++..+|++|+.+| + ..+-+++.--...+++|..-.+. ++.++ ++.+-|.++|...+
T Consensus 229 l~el~~~l~~~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavPRd-------ie~~v~~l~~v~l~~iDDL~~iv 301 (414)
T COG0373 229 LEELLEALAEADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVPRD-------VEPEVGELPNVFLYTIDDLEEIV 301 (414)
T ss_pred HHHHHHhhhhCCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCCCC-------CCccccCcCCeEEEehhhHHHHH
Confidence 4689999999999999864 2 23344555555567777432111 22222 23344677776666
Q ss_pred HHHhCCCHHHHHHHHHHHHH
Q 036427 486 SQWFGPKIDELKAMSQNALK 505 (536)
Q Consensus 486 ~~ll~~d~~~~~~m~~~a~~ 505 (536)
+.-+ +.|++....+..
T Consensus 302 ~~n~----~~R~~~~~~ae~ 317 (414)
T COG0373 302 EENL----EARKEEAAKAEA 317 (414)
T ss_pred HHhH----HHHHHHHHHHHH
Confidence 5533 345444444444
No 196
>PRK13195 pyrrolidone-carboxylate peptidase; Provisional
Probab=76.19 E-value=5.8 Score=38.15 Aligned_cols=29 Identities=17% Similarity=0.115 Sum_probs=22.1
Q ss_pred CceEEEEe-CCCCchHHHHHHHHHHHHHhc
Q 036427 144 PKKVLILM-SDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 144 ~mKIL~~~-~~~GgGh~~~~l~La~~L~~~ 172 (536)
|||||++. ..+||-...+...+++.|...
T Consensus 1 m~~ILvTGF~PFgg~~~NPS~~~v~~L~~~ 30 (222)
T PRK13195 1 MSKVLVTGFGPYGVTPVNPAQLTAEELDGR 30 (222)
T ss_pred CCEEEEeeecCCCCCCcCchHHHHHhcccc
Confidence 57888876 457666788888899988654
No 197
>PRK13196 pyrrolidone-carboxylate peptidase; Provisional
Probab=75.82 E-value=6.2 Score=37.73 Aligned_cols=29 Identities=7% Similarity=-0.034 Sum_probs=22.3
Q ss_pred CceEEEEe-CCCCchHHHHHHHHHHHHHhc
Q 036427 144 PKKVLILM-SDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 144 ~mKIL~~~-~~~GgGh~~~~l~La~~L~~~ 172 (536)
|||||++. ..+|+-...+...+++.|...
T Consensus 1 m~~ILvTGF~PF~~~~~NPS~~~~~~L~~~ 30 (211)
T PRK13196 1 MPTLLLTGFEPFHTHPVNPSAQAAQALNGE 30 (211)
T ss_pred CCEEEEEeecCCCCCCCCcHHHHHHhcccc
Confidence 58999987 447656788888888888665
No 198
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=75.82 E-value=53 Score=32.54 Aligned_cols=98 Identities=17% Similarity=0.177 Sum_probs=58.1
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
+..++|+|+=+|.| | ++..+++.++.|+..-+++.|.... |+......+
T Consensus 3 ~~~~~IgvFDSGVG-G-----LsVlrei~~~LP~e~~iY~~D~a~~----PYG~ks~e~--------------------- 51 (269)
T COG0796 3 EPQPPIGVFDSGVG-G-----LSVLREIRRQLPDEDIIYVGDTARF----PYGEKSEEE--------------------- 51 (269)
T ss_pred ccCCeEEEEECCCC-c-----HHHHHHHHHHCCCCcEEEEecCCCC----CCCCCCHHH---------------------
Confidence 45579999999994 3 4455677777788888899886432 221111111
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD 282 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d 282 (536)
...+..++..++.+..+++++.-....+.+.+..++..- .+|++-++..
T Consensus 52 ---------I~~~~~~i~~~l~~~~ik~lVIACNTASa~al~~LR~~~---~iPVvGviPa 100 (269)
T COG0796 52 ---------IRERTLEIVDFLLERGIKALVIACNTASAVALEDLREKF---DIPVVGVIPA 100 (269)
T ss_pred ---------HHHHHHHHHHHHHHcCCCEEEEecchHHHHHHHHHHHhC---CCCEEEeccc
Confidence 112234566667776799877644434444444444432 4898877643
No 199
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=75.47 E-value=26 Score=32.03 Aligned_cols=34 Identities=26% Similarity=0.367 Sum_probs=25.6
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
||||++-+-.||-|..-+..|++.+ + +++.+.++
T Consensus 1 M~ILlle~y~ggSHk~~~~~L~~~~-~-----~~~~lltL 34 (168)
T PF12038_consen 1 MRILLLEPYYGGSHKQWADGLAAHS-E-----HEWTLLTL 34 (168)
T ss_pred CeEEEEccccccCHHHHHHHHHHhc-c-----CCEEEEEc
Confidence 8999999888888888777777766 2 35655554
No 200
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=74.40 E-value=10 Score=40.66 Aligned_cols=124 Identities=18% Similarity=0.179 Sum_probs=55.7
Q ss_pred CCCchHHHHHHHHHHHHHhcc-------CC--ceEEEEee-cccccCCCCCCc-chhHHHHHHhhccccceeecCCCc--
Q 036427 153 DTGGGHRASAEAIKAAFHEKF-------GN--EYQVFVTD-LWSDHTPWPFNQ-LPRSYNFLVKHGPLWKMTYYGTAP-- 219 (536)
Q Consensus 153 ~~GgGh~~~~l~La~~L~~~~-------g~--g~eV~v~~-~~~~~~~~~~~~-~~~~y~~~~~~~~l~~~~~~~~~~-- 219 (536)
+| ||-+..++.++++|.+.. |- ...|.+++ +..+..+...+. +...+ -.++..+.+.++.....
T Consensus 294 DT-GGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~--gt~~a~IlRvPF~~~~gi~ 370 (550)
T PF00862_consen 294 DT-GGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAKGTTCNQRLEKVS--GTENARILRVPFGPEKGIL 370 (550)
T ss_dssp TS-SHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTTCGGGTSSEEEET--TESSEEEEEE-ESESTEEE
T ss_pred CC-CCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCcCCCccccccccC--CCCCcEEEEecCCCCcchh
Confidence 46 799999999999997641 10 12354443 333322111111 11110 01222344444443221
Q ss_pred -ccccchhhhhhhHHHHHHHHHH-HHh--hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCC
Q 036427 220 -RVIHQSNFAATSTFIAREVAKG-LMK--YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDL 283 (536)
Q Consensus 220 -~~~~~~~~~~~~~~~~~~l~~~-l~~--~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~ 283 (536)
.++.+...+.....++..+.+. +++ -+||+||.+..-...++..++.+.| +|..++.|.+
T Consensus 371 ~kwisrf~lWPyLe~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~lg----v~~~~iaHsL 434 (550)
T PF00862_consen 371 RKWISRFDLWPYLEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRKLG----VTQCFIAHSL 434 (550)
T ss_dssp -S---GGG-GGGHHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHHHT-----EEEEE-SS-
T ss_pred hhccchhhchhhHHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhhcC----Cceehhhhcc
Confidence 1222222333333333333333 333 5799999886554445566677776 8988887754
No 201
>PF00551 Formyl_trans_N: Formyl transferase; InterPro: IPR002376 A number of formyl transferases belong to this group. Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. Formyltetrahydrofolate dehydrogenase produces formate from formyl- tetrahydrofolate. This is the N-terminal domain of these enzymes and is found upstream of the C-terminal domain (IPR005793 from INTERPRO). The trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase catalyses the second, third and fifth steps in de novo purine biosynthesis. The glycinamide ribonucleotide transformylase belongs to this group.; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3P9X_B 3OBI_A 3R8X_A 3KCQ_C 3RFO_D 3AV3_A 3N0V_D 3LOU_A 3O1L_A 4DS3_A ....
Probab=73.75 E-value=7.3 Score=36.17 Aligned_cols=21 Identities=24% Similarity=0.330 Sum_probs=15.9
Q ss_pred HHHHHHHHHhhCCCEEEEcCc
Q 036427 235 AREVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 235 ~~~l~~~l~~~kPDvVi~~~~ 255 (536)
..++.+.+++.+||++++.+.
T Consensus 68 ~~~~~~~l~~~~~Dl~v~~~~ 88 (181)
T PF00551_consen 68 DEELLELLESLNPDLIVVAGY 88 (181)
T ss_dssp HHHHHHHHHHTT-SEEEESS-
T ss_pred hhHHHHHHHhhccceeehhhh
Confidence 456788899999999998764
No 202
>PF02844 GARS_N: Phosphoribosylglycinamide synthetase, N domain; InterPro: IPR020562 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: ATP + 5-phosphoribosylamine + glycine = ADP + Pi + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ....
Probab=73.48 E-value=29 Score=28.89 Aligned_cols=33 Identities=27% Similarity=0.368 Sum_probs=22.5
Q ss_pred HHHHHHHHhhCCCEEEEcC--cccchHHHHHHHHcC
Q 036427 236 REVAKGLMKYQPDIIISVH--PLMQHVPLRILRAKG 269 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~--~~~~~i~~~~~~~~g 269 (536)
..+.++.++.++|+|+.-. |+..++ .-.++..|
T Consensus 52 ~~l~~~a~~~~idlvvvGPE~pL~~Gl-~D~l~~~g 86 (100)
T PF02844_consen 52 EELADFAKENKIDLVVVGPEAPLVAGL-ADALRAAG 86 (100)
T ss_dssp HHHHHHHHHTTESEEEESSHHHHHTTH-HHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEECChHHHHHHH-HHHHHHCC
Confidence 4777889999999998754 444554 33455555
No 203
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=73.29 E-value=16 Score=36.52 Aligned_cols=18 Identities=22% Similarity=0.458 Sum_probs=14.9
Q ss_pred HHHHHHHhhCCCEEEEcC
Q 036427 237 EVAKGLMKYQPDIIISVH 254 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~ 254 (536)
.+.+.+++.+||+||...
T Consensus 41 ~v~~~i~~~~PDvVIn~A 58 (281)
T COG1091 41 AVLEVIRETRPDVVINAA 58 (281)
T ss_pred HHHHHHHhhCCCEEEECc
Confidence 566789999999999755
No 204
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=72.81 E-value=12 Score=30.85 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=26.8
Q ss_pred hHHHHHhhcCeEEECCC--h-----HHHHHHHHhCCcEEEecc
Q 036427 419 KMEEAMGACDCIITKAG--P-----GTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 419 ~l~~ll~~aDv~V~~sG--~-----~tllEAma~GlPVI~~~~ 454 (536)
.++..+..||++|+..+ . ..--+|-..|+|++.+..
T Consensus 41 ~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~~~ 83 (97)
T PF10087_consen 41 RLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYSRS 83 (97)
T ss_pred HHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEECC
Confidence 47889999999988763 1 222347788999999873
No 205
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=68.24 E-value=35 Score=37.30 Aligned_cols=108 Identities=15% Similarity=0.165 Sum_probs=67.0
Q ss_pred EEEecCh--hhHHHHHhhcCeEEECCC---hHHHHHHHHhCCcEEEeccCCccccCCh----------------hhHhh-
Q 036427 411 VQVKGFV--SKMEEAMGACDCIITKAG---PGTIAEAMIRGLPIILNDFIAGQEAGNV----------------PYVVE- 468 (536)
Q Consensus 411 V~~~G~v--~~l~~ll~~aDv~V~~sG---~~tllEAma~GlPVI~~~~~~~~e~~na----------------~~lv~- 468 (536)
|+-.|.. +++..+|+.+.++|--++ +-+.+||+|.|+|.|-......+...|. .++..
T Consensus 324 V~NHG~l~~~ef~~lL~~akvfiGlGfP~EgPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~ 403 (559)
T PF15024_consen 324 VKNHGILSGDEFQQLLRKAKVFIGLGFPYEGPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEF 403 (559)
T ss_pred hhhcCcCCHHHHHHHHHhhhEeeecCCCCCCCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhh
Confidence 4445655 589999999999998763 5678999999998886543211111111 11221
Q ss_pred CCcee----ecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhcC
Q 036427 469 NGCGK----FSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRN 527 (536)
Q Consensus 469 ~g~g~----~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~~~ 527 (536)
-|.-- -.+|.+++.++|+++++ .+- -.-+--+++.+.+.+.+..+++..+
T Consensus 404 iG~PhVytVd~~n~~~v~~Avk~il~-~~v--------~Py~P~efT~egmLeRv~~~ie~q~ 457 (559)
T PF15024_consen 404 IGEPHVYTVDINNSTEVEAAVKAILA-TPV--------EPYLPYEFTCEGMLERVNALIEKQD 457 (559)
T ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHh-cCC--------CCcCCcccCHHHHHHHHHHHHHhhh
Confidence 22211 12488999999999998 431 0112245677777777777776543
No 206
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=68.02 E-value=94 Score=28.16 Aligned_cols=39 Identities=18% Similarity=0.224 Sum_probs=28.0
Q ss_pred hhHHHHHhhcCeEEE-CCChHHH---HHHHHhCCcEEEeccCC
Q 036427 418 SKMEEAMGACDCIIT-KAGPGTI---AEAMIRGLPIILNDFIA 456 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~-~sG~~tl---lEAma~GlPVI~~~~~~ 456 (536)
+.-.-+...||.+|. |+|.+|+ .|++..++|+++.+..+
T Consensus 83 ~Rk~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~~g 125 (159)
T TIGR00725 83 ARNFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRGTG 125 (159)
T ss_pred hHHHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEECCC
Confidence 344567788998665 4456665 45899999999988643
No 207
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=67.19 E-value=31 Score=33.17 Aligned_cols=37 Identities=22% Similarity=0.489 Sum_probs=30.3
Q ss_pred ceEEEEeCCCCc-hHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 145 KKVLILMSDTGG-GHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 145 mKIL~~~~~~Gg-Gh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
-||.++|+|-|| |-.+...+|+.+|.+. |..|.++|+
T Consensus 2 ~~iIVvTSGKGGVGKTTttAnig~aLA~~---GkKv~liD~ 39 (272)
T COG2894 2 ARIIVVTSGKGGVGKTTTTANIGTALAQL---GKKVVLIDF 39 (272)
T ss_pred ceEEEEecCCCCcCccchhHHHHHHHHHc---CCeEEEEec
Confidence 478888887654 7788888999999999 888988874
No 208
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=66.60 E-value=1.2e+02 Score=32.31 Aligned_cols=64 Identities=17% Similarity=0.217 Sum_probs=38.4
Q ss_pred EEEEecCCHHHHHHHHc-CCCCCCEEEecChhhHHHHHhhcCeEEECCC-hHHHH-HHHHhCCcEEEeccC
Q 036427 388 VLVICGRNKKLANKLLS-TDWKIPVQVKGFVSKMEEAMGACDCIITKAG-PGTIA-EAMIRGLPIILNDFI 455 (536)
Q Consensus 388 ~lvi~G~~~~l~~~l~~-~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG-~~tll-EAma~GlPVI~~~~~ 455 (536)
-+.++....+-.+.+.+ .+ .....++ +++.+.+..+|++|..++ |..++ ..+.-+.|.+++|..
T Consensus 207 ~I~V~nRt~~ra~~La~~~~---~~~~~~~-~~l~~~l~~aDiVI~aT~a~~~vi~~~~~~~~~~~~iDLa 273 (414)
T PRK13940 207 QIMLANRTIEKAQKITSAFR---NASAHYL-SELPQLIKKADIIIAAVNVLEYIVTCKYVGDKPRVFIDIS 273 (414)
T ss_pred EEEEECCCHHHHHHHHHHhc---CCeEecH-HHHHHHhccCCEEEECcCCCCeeECHHHhCCCCeEEEEeC
Confidence 35666776532233322 21 1233333 577889999999999875 33222 344568899999863
No 209
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=66.14 E-value=66 Score=34.30 Aligned_cols=40 Identities=18% Similarity=0.237 Sum_probs=29.6
Q ss_pred hHHHHHhhcCeEEECCChH-----------HHHHHHHhCCcEEEeccCCcc
Q 036427 419 KMEEAMGACDCIITKAGPG-----------TIAEAMIRGLPIILNDFIAGQ 458 (536)
Q Consensus 419 ~l~~ll~~aDv~V~~sG~~-----------tllEAma~GlPVI~~~~~~~~ 458 (536)
++...++.||++|..+|+. -++-|..+|+|+++.+..-++
T Consensus 110 ~~~~~l~~aDlvI~gGG~lfqD~y~~~~~~y~l~A~l~gkpv~l~gqsiGP 160 (426)
T PRK10017 110 DFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCAFMAKKPLYMIGHSVGP 160 (426)
T ss_pred HHHHHHHhCCEEEECCCCccccCcccHHHHHHHHHHHcCCCEEEECCcCCC
Confidence 5566799999999976521 134578899999999876443
No 210
>COG1927 Mtd Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase [Energy production and conversion]
Probab=65.49 E-value=34 Score=32.29 Aligned_cols=94 Identities=17% Similarity=0.316 Sum_probs=53.8
Q ss_pred ChHHHHHHHH-hCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHH
Q 036427 435 GPGTIAEAMI-RGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVF 513 (536)
Q Consensus 435 G~~tllEAma-~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~ 513 (536)
||...-|.++ .++|+|++.-..+.. .-+.+.+.|.|.++-..+.+.-+=+++| ||-....+-....+.....+..
T Consensus 75 GP~kARE~l~~s~~PaiiigDaPg~~--vkdeleeqGlGYIivk~DpmiGArREFL--DPvEMA~fNaDv~kVLa~tGa~ 150 (277)
T COG1927 75 GPKKAREILSDSDVPAIIIGDAPGLK--VKDELEEQGLGYIIVKADPMIGARREFL--DPVEMASFNADVMKVLAATGAF 150 (277)
T ss_pred CchHHHHHHhhcCCCEEEecCCccch--hHHHHHhcCCeEEEecCCcccchhhhhc--CHHHHHhhhhHHHHHHHhccHH
Confidence 7888888887 799999876433322 3456889999987754444555555555 3544444444343333334444
Q ss_pred HHHHHH-HHHHhh-----cCCcCCC
Q 036427 514 RIVQDL-HELVRQ-----RNFVPHY 532 (536)
Q Consensus 514 ~i~~~i-~~l~~~-----~~~~~~~ 532 (536)
+++++- .+++++ ..++||+
T Consensus 151 R~vQeaiD~~ie~vk~gk~~eLP~i 175 (277)
T COG1927 151 RLVQEAIDKVIEDVKEGKEPELPKI 175 (277)
T ss_pred HHHHHHHHHHHHHHhcCCCcCCCce
Confidence 444332 222222 4677775
No 211
>PF05014 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransferase; InterPro: IPR007710 Nucleoside 2-deoxyribosyltransferase (2.4.2.6 from EC) catalyses the cleavage of the glycosidic bonds of 2-deoxyribonucleosides. Nucleoside 2-deoxyribosyltransferases can be divided into two groups based on their substrate specificity: class I enzymes are specific for the transfer of deoxyribose between two purines, while class II enzymes will transfer the deoxyribose between either purines or pyrimidines. The structure of the class I [] and class II [] enzymes are very similar. In class I enzymes, the purine base shields the active site from solvent, which the smaller pyrimidine base cannot do, while in class II enzymes the active site is shielded by a loop (residues 48-62). Both classes of enzymes are found in various Lactobacillus species and participate in nucleoside recycling in these microorganisms. This entry represents both classes of enzymes.; GO: 0050144 nucleoside deoxyribosyltransferase activity, 0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity, 0009159 deoxyribonucleoside monophosphate catabolic process; PDB: 1S2L_A 1S2D_C 1S2I_A 1S3F_B 1S2G_C 2A0K_A 2F67_A 2F64_B 2F62_A 2F2T_A ....
Probab=65.27 E-value=8.3 Score=32.63 Aligned_cols=35 Identities=34% Similarity=0.465 Sum_probs=28.0
Q ss_pred HHHHhhcCeEEEC--C---ChHHHHH---HHHhCCcEEEeccC
Q 036427 421 EEAMGACDCIITK--A---GPGTIAE---AMIRGLPIILNDFI 455 (536)
Q Consensus 421 ~~ll~~aDv~V~~--s---G~~tllE---Ama~GlPVI~~~~~ 455 (536)
.+.+..||++|.. . ..+|.+| |.+.|+||++....
T Consensus 56 ~~~i~~~D~via~l~~~~~d~Gt~~ElG~A~algkpv~~~~~d 98 (113)
T PF05014_consen 56 LEGIRECDIVIANLDGFRPDSGTAFELGYAYALGKPVILLTED 98 (113)
T ss_dssp HHHHHHSSEEEEEECSSS--HHHHHHHHHHHHTTSEEEEEECC
T ss_pred HHHHHHCCEEEEECCCCCCCCcHHHHHHHHHHCCCEEEEEEcC
Confidence 4788999997763 2 4789999 89999999998754
No 212
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=64.47 E-value=34 Score=31.72 Aligned_cols=28 Identities=18% Similarity=0.461 Sum_probs=21.6
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhcc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKF 173 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~ 173 (536)
+.+++++-+. |||..-++.|-++|.+++
T Consensus 38 s~~~lVvlGS--GGHT~EMlrLl~~l~~~y 65 (211)
T KOG3339|consen 38 SLSTLVVLGS--GGHTGEMLRLLEALQDLY 65 (211)
T ss_pred cceEEEEEcC--CCcHHHHHHHHHHHHhhc
Confidence 3466665544 699999999999998875
No 213
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=63.08 E-value=33 Score=34.22 Aligned_cols=31 Identities=26% Similarity=0.389 Sum_probs=20.7
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEee
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTD 183 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~ 183 (536)
|||||+.++- .-...|.+.|.+. +++|+.++
T Consensus 1 MriLI~GasG-----~lG~~l~~~l~~~---~~~v~~~~ 31 (286)
T PF04321_consen 1 MRILITGASG-----FLGSALARALKER---GYEVIATS 31 (286)
T ss_dssp EEEEEETTTS-----HHHHHHHHHHTTT---SEEEEEES
T ss_pred CEEEEECCCC-----HHHHHHHHHHhhC---CCEEEEeC
Confidence 8999886431 3344567888877 77877764
No 214
>TIGR00853 pts-lac PTS system, lactose/cellobiose family IIB component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Lac family includes several sequenced lactose (b-galactoside) permeases of Gram-positive bacteria as well as those in E. coli. While the Lac family usually consists of two polypeptide components IIA and IICB, the Chb permease of E. coli consists of three IIA, IIB and IIC. This family is specific for the IIB subunit of the Lac PTS family.
Probab=61.80 E-value=30 Score=28.47 Aligned_cols=67 Identities=10% Similarity=0.221 Sum_probs=39.5
Q ss_pred EEEEEecCCH-------HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCC---hHHHHH--HHHhCCcEEEecc
Q 036427 387 QVLVICGRNK-------KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAG---PGTIAE--AMIRGLPIILNDF 454 (536)
Q Consensus 387 ~~lvi~G~~~-------~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG---~~tllE--Ama~GlPVI~~~~ 454 (536)
+++++||.|- .+.+.+++.++.-.+.-.+. .++.+....+|++++.+- -..-++ +-..|+||..++.
T Consensus 5 ~ILl~C~~G~sSS~l~~k~~~~~~~~gi~~~v~a~~~-~~~~~~~~~~Dvill~pqi~~~~~~i~~~~~~~~ipv~~I~~ 83 (95)
T TIGR00853 5 NILLLCAAGMSTSLLVNKMNKAAEEYGVPVKIAAGSY-GAAGEKLDDADVVLLAPQVAYMLPDLKKETDKKGIPVEVING 83 (95)
T ss_pred EEEEECCCchhHHHHHHHHHHHHHHCCCcEEEEEecH-HHHHhhcCCCCEEEECchHHHHHHHHHHHhhhcCCCEEEeCh
Confidence 5667777663 34445555555434433332 356667778899888762 122233 3345789999885
No 215
>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown]
Probab=61.29 E-value=1.1e+02 Score=29.58 Aligned_cols=25 Identities=16% Similarity=0.360 Sum_probs=19.3
Q ss_pred hHHHHHHHHHHHHhhCCCEEEEcCc
Q 036427 231 STFIAREVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 231 ~~~~~~~l~~~l~~~kPDvVi~~~~ 255 (536)
.......|.+++++.+||+|+++.+
T Consensus 94 ~~~~~~~L~~ii~~~~P~~V~t~~~ 118 (237)
T COG2120 94 PEEITGALVAIIRRLRPDVVFTPYP 118 (237)
T ss_pred hHHHHHHHHHHHHHhCCCEEEecCC
Confidence 3345567889999999998888654
No 216
>cd05565 PTS_IIB_lactose PTS_IIB_lactose: subunit IIB of enzyme II (EII) of the lactose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS) found in Firmicutes as well as Actinobacteria. In this system, EII is a lactose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. The IIC and IIB domains are expressed as a single protein from the lac operon. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include lactose, chitobiose/lichenan, ascorbate, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.
Probab=60.57 E-value=30 Score=28.78 Aligned_cols=66 Identities=12% Similarity=0.140 Sum_probs=39.6
Q ss_pred EEEEEecCCH-------HHHHHHHcCCCCCCEEEecC-hhhHHHHHhhcCeEEECCC----hHHHHH-HHHhCCcEEEec
Q 036427 387 QVLVICGRNK-------KLANKLLSTDWKIPVQVKGF-VSKMEEAMGACDCIITKAG----PGTIAE-AMIRGLPIILND 453 (536)
Q Consensus 387 ~~lvi~G~~~-------~l~~~l~~~~~~~~V~~~G~-v~~l~~ll~~aDv~V~~sG----~~tllE-Ama~GlPVI~~~ 453 (536)
+++++||.|- ++++.+++.++. +.+.-. ..++.+.+..+|++++.+- --.+-| +-..|+||.+++
T Consensus 2 ~Ill~C~~GaSSs~la~km~~~a~~~gi~--~~i~a~~~~e~~~~~~~~Dvill~PQv~~~~~~i~~~~~~~~ipv~~I~ 79 (99)
T cd05565 2 NVLVLCAGGGTSGLLANALNKGAKERGVP--LEAAAGAYGSHYDMIPDYDLVILAPQMASYYDELKKDTDRLGIKLVTTT 79 (99)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCc--EEEEEeeHHHHHHhccCCCEEEEcChHHHHHHHHHHHhhhcCCCEEEeC
Confidence 3556666552 345555565553 333222 3477788889999888762 112333 445689999988
Q ss_pred c
Q 036427 454 F 454 (536)
Q Consensus 454 ~ 454 (536)
.
T Consensus 80 ~ 80 (99)
T cd05565 80 G 80 (99)
T ss_pred H
Confidence 3
No 217
>PF01470 Peptidase_C15: Pyroglutamyl peptidase This is family C15 in the peptidase classification. ; InterPro: IPR000816 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to MEROPS peptidase family C15 (pyroglutamyl peptidase I, clan CF). The type example being pyroglutamyl peptidase I of Bacillus amyloliquefaciens. Pyroglutamyl/pyrrolidone carboxyl peptidase (Pcp or PYRase) is an exopeptidase that hydrolytically removes the pGlu from pGlu-peptides or pGlu-proteins [, ]. PYRase has been found in prokaryotes and eukaryotes where at least two different classes have been characterised: the first containing bacterial and animal type I PYRases, and the second containing animal type II and serum PYRases. Type I and bacterial PYRases are soluble enzymes, while type II PYRases are membrane-bound. The primary application of PYRase has been its utilisation for protein or peptide sequencing, and bacterial diagnosis []. The conserved residues Cys-144 and His-168 have been identified by inhibition and mutagenesis studies [, ].; GO: 0006508 proteolysis; PDB: 1A2Z_A 1IU8_A 3RNZ_A 3RO0_D 1AUG_D 2EBJ_A 3LAC_A 1X12_B 1Z8X_B 1X10_C ....
Probab=59.33 E-value=17 Score=34.53 Aligned_cols=36 Identities=11% Similarity=0.088 Sum_probs=22.4
Q ss_pred ceEEEEe-CCCCchHHHHHHHHHHHHHhccCCceEEE
Q 036427 145 KKVLILM-SDTGGGHRASAEAIKAAFHEKFGNEYQVF 180 (536)
Q Consensus 145 mKIL~~~-~~~GgGh~~~~l~La~~L~~~~g~g~eV~ 180 (536)
||||++. ..+|+=...+...+++.|.+....+++|.
T Consensus 1 m~ILvTGFgpF~~~~~NpS~~~v~~L~~~~~~~~~v~ 37 (202)
T PF01470_consen 1 MRILVTGFGPFGGVPVNPSWELVKRLPGELIGGAEVH 37 (202)
T ss_dssp EEEEEEEE-S-TT-SS-HHHHHHHHHTTSEETTEEEE
T ss_pred CEEEEecccCCCCCCCChHHHHHHHcCCCcCCCceEE
Confidence 7899987 45754467888889999985533345553
No 218
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=59.32 E-value=14 Score=34.91 Aligned_cols=20 Identities=25% Similarity=0.471 Sum_probs=15.9
Q ss_pred HHHHHHHHhhCCCEEEEcCc
Q 036427 236 REVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~ 255 (536)
..+.+++++++||++++.+.
T Consensus 70 ~~~~~~l~~~~~D~iv~~~~ 89 (200)
T PRK05647 70 AALVEALDAYQPDLVVLAGF 89 (200)
T ss_pred HHHHHHHHHhCcCEEEhHHh
Confidence 46678899999999988653
No 219
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=58.57 E-value=32 Score=27.15 Aligned_cols=38 Identities=26% Similarity=0.463 Sum_probs=33.9
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
.+.+++++.++ +.|..+-..+|+.|.+. |+.|+..|..
T Consensus 15 ~k~~v~i~HG~-~eh~~ry~~~a~~L~~~---G~~V~~~D~r 52 (79)
T PF12146_consen 15 PKAVVVIVHGF-GEHSGRYAHLAEFLAEQ---GYAVFAYDHR 52 (79)
T ss_pred CCEEEEEeCCc-HHHHHHHHHHHHHHHhC---CCEEEEECCC
Confidence 57799999999 79999999999999998 9999998853
No 220
>PRK12767 carbamoyl phosphate synthase-like protein; Provisional
Probab=58.52 E-value=29 Score=35.12 Aligned_cols=34 Identities=12% Similarity=0.066 Sum_probs=25.1
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
|||||++..+. ++ .+++.|++. +.+++|+++|..
T Consensus 1 ~~~vLv~g~~~--~~-----~~~~~l~~~-~~g~~vi~~d~~ 34 (326)
T PRK12767 1 MMNILVTSAGR--RV-----QLVKALKKS-LLKGRVIGADIS 34 (326)
T ss_pred CceEEEecCCc--cH-----HHHHHHHHh-ccCCEEEEECCC
Confidence 68999998865 33 667888887 324889888764
No 221
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=58.20 E-value=1.3e+02 Score=28.33 Aligned_cols=39 Identities=15% Similarity=0.267 Sum_probs=28.5
Q ss_pred ceEEEEeCC-CCchHHHHHHHHHHHHHh-ccCCceEEEEeeccc
Q 036427 145 KKVLILMSD-TGGGHRASAEAIKAAFHE-KFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~~~-~GgGh~~~~l~La~~L~~-~~g~g~eV~v~~~~~ 186 (536)
+|++.+++. -|-|-...+..||.+|.+ . |..|.++|...
T Consensus 35 ~~vi~v~s~kgG~GkSt~a~nLA~~la~~~---g~~VLlvD~D~ 75 (207)
T TIGR03018 35 NNLIMVTSSLPGEGKSFTAINLAISLAQEY---DKTVLLIDADL 75 (207)
T ss_pred CeEEEEECCCCCCCHHHHHHHHHHHHHHhc---CCeEEEEECCC
Confidence 455555543 445888999999999986 5 77899987543
No 222
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=58.15 E-value=1e+02 Score=32.09 Aligned_cols=109 Identities=21% Similarity=0.233 Sum_probs=63.8
Q ss_pred hHHHHHHcCCC---CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHH----cC---
Q 036427 337 KVELRRELGMD---EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLL----ST--- 405 (536)
Q Consensus 337 ~~~~r~~lgi~---~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~----~~--- 405 (536)
+..+.+++|++ ++...|.+++- ... .+..+++.+.. ....+.+++-.|... .+.+.+. ..
T Consensus 168 ~~~~~~~lg~~~~~~~~~~vslF~Y--e~~----~l~~ll~~~~~---~~~pv~llvp~g~~~~~~~~~~~~~~~~~g~~ 238 (374)
T PF10093_consen 168 RAAFLRRLGLPEPEPGALRVSLFCY--ENA----ALASLLDAWAA---SPKPVHLLVPEGRALNSLAAWLGDALLQAGDS 238 (374)
T ss_pred HHHHHHHcCCCCCCCCCeEEEEEeC--Cch----HHHHHHHHHhc---CCCCeEEEecCCccHHHHHHHhccccccCccc
Confidence 44667788885 33444433322 111 23334444431 134455555555543 2322222 00
Q ss_pred --CCCCCEEEecCh--hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccC
Q 036427 406 --DWKIPVQVKGFV--SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 406 --~~~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~ 455 (536)
.-.-.+++++|+ ++.++++-.||+-++.+ -=+++=|.-+|+|.|=--++
T Consensus 239 ~~~g~l~l~~lPF~~Q~~yD~LLw~cD~NfVRG-EDSfVRAqwAgkPFvWhIYp 291 (374)
T PF10093_consen 239 WQRGNLTLHVLPFVPQDDYDRLLWACDFNFVRG-EDSFVRAQWAGKPFVWHIYP 291 (374)
T ss_pred cccCCeEEEECCCCCHHHHHHHHHhCccceEec-chHHHHHHHhCCCceEecCc
Confidence 122358889998 58999999999988875 35678899999999976553
No 223
>PRK13193 pyrrolidone-carboxylate peptidase; Provisional
Probab=55.63 E-value=27 Score=33.31 Aligned_cols=28 Identities=14% Similarity=0.067 Sum_probs=20.8
Q ss_pred ceEEEEe-CCCCchHHHHHHHHHHHHHhc
Q 036427 145 KKVLILM-SDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 145 mKIL~~~-~~~GgGh~~~~l~La~~L~~~ 172 (536)
||||++. ..+||-...+...+++.|.+.
T Consensus 1 M~vLiTGF~PF~g~~~NPS~~~v~~L~~~ 29 (209)
T PRK13193 1 MTVLLFGFEPFLEYKENPSQLIVEALNGS 29 (209)
T ss_pred CEEEEEeeCCCCCCCCCcHHHHHHHhhcc
Confidence 6788776 447656788888888888764
No 224
>PLN00203 glutamyl-tRNA reductase
Probab=55.58 E-value=3.2e+02 Score=30.04 Aligned_cols=38 Identities=21% Similarity=0.251 Sum_probs=25.4
Q ss_pred hhHHHHHhhcCeEEECCC---hH---HHHHHHHh-----CCcEEEeccC
Q 036427 418 SKMEEAMGACDCIITKAG---PG---TIAEAMIR-----GLPIILNDFI 455 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~~sG---~~---tllEAma~-----GlPVI~~~~~ 455 (536)
+++.+.+..+|++|+.++ |. -.++.+.. |.|.+++|..
T Consensus 321 ~dl~~al~~aDVVIsAT~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLA 369 (519)
T PLN00203 321 DEMLACAAEADVVFTSTSSETPLFLKEHVEALPPASDTVGGKRLFVDIS 369 (519)
T ss_pred hhHHHHHhcCCEEEEccCCCCCeeCHHHHHHhhhcccccCCCeEEEEeC
Confidence 467788999999998753 22 22333321 5799999864
No 225
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=55.35 E-value=21 Score=32.34 Aligned_cols=39 Identities=38% Similarity=0.426 Sum_probs=32.3
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
||+||+-++.-|-....+.-||..|++. |++|.+.|+..
T Consensus 1 Mk~LIlYstr~GqT~kIA~~iA~~L~e~---g~qvdi~dl~~ 39 (175)
T COG4635 1 MKTLILYSTRDGQTRKIAEYIASHLRES---GIQVDIQDLHA 39 (175)
T ss_pred CceEEEEecCCCcHHHHHHHHHHHhhhc---CCeeeeeehhh
Confidence 7999987765467778888999999999 89999987643
No 226
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=55.35 E-value=35 Score=34.42 Aligned_cols=19 Identities=5% Similarity=0.059 Sum_probs=15.3
Q ss_pred HHHHHHHHhhCCCEEEEcC
Q 036427 236 REVAKGLMKYQPDIIISVH 254 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~ 254 (536)
..|.+++++++||.|+-+.
T Consensus 57 ~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 57 ALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred HHHHHHHHhcCCCEEEECc
Confidence 4677889999999987554
No 227
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=54.34 E-value=57 Score=33.01 Aligned_cols=91 Identities=16% Similarity=0.195 Sum_probs=53.9
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
....||+++.++- .|.+. +=++++. |.+|+.+|.+.+.+...+ .+..-...+
T Consensus 10 ~~a~kvmLLGSGE-LGKEv-----aIe~QRL---G~eViAVDrY~~APAmqV----------Ahrs~Vi~M--------- 61 (394)
T COG0027 10 PQATKVMLLGSGE-LGKEV-----AIEAQRL---GVEVIAVDRYANAPAMQV----------AHRSYVIDM--------- 61 (394)
T ss_pred CCCeEEEEecCCc-cchHH-----HHHHHhc---CCEEEEecCcCCChhhhh----------hhheeeeec---------
Confidence 3446899998876 35443 3445566 899999998766433211 111111111
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCC
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLL 271 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~ 271 (536)
.....+...+++++||.|+-.-.....-.+.-+...|..
T Consensus 62 -----------lD~~al~avv~rekPd~IVpEiEAI~td~L~elE~~G~~ 100 (394)
T COG0027 62 -----------LDGDALRAVVEREKPDYIVPEIEAIATDALVELEEEGYT 100 (394)
T ss_pred -----------cCHHHHHHHHHhhCCCeeeehhhhhhHHHHHHHHhCCce
Confidence 112477788999999999976544333345556666643
No 228
>PRK13194 pyrrolidone-carboxylate peptidase; Provisional
Probab=54.29 E-value=29 Score=33.07 Aligned_cols=28 Identities=29% Similarity=0.345 Sum_probs=20.9
Q ss_pred ceEEEEe-CCCCchHHHHHHHHHHHHHhc
Q 036427 145 KKVLILM-SDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 145 mKIL~~~-~~~GgGh~~~~l~La~~L~~~ 172 (536)
||||++. ..+||-...+...+++.|...
T Consensus 1 M~ILvTGF~PF~~~~~NPS~~~~~~L~~~ 29 (208)
T PRK13194 1 MKVLVTGFEPFGGDKKNPTMDIVKALDGK 29 (208)
T ss_pred CEEEEEeeCCCCCCCCCcHHHHHHhcccc
Confidence 6888876 447656788888888888665
No 229
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=51.97 E-value=29 Score=32.00 Aligned_cols=80 Identities=14% Similarity=0.081 Sum_probs=45.6
Q ss_pred hhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC----------CCCccc----------------ccccccCCE
Q 036427 244 KYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD----------LSTCHP----------------TWFHKLVTR 297 (536)
Q Consensus 244 ~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d----------~~~~~~----------------~~~~~~~d~ 297 (536)
.+.||+|++|..|-.. +.+ +. ..++.|++.+.-- +....+ ..-...+|.
T Consensus 64 Gf~PDvI~~H~GWGe~--Lfl-kd--v~P~a~li~Y~E~~y~~~g~d~~FDpe~p~~~~~~~~~r~rN~~~l~~l~~~D~ 138 (171)
T PF12000_consen 64 GFVPDVIIAHPGWGET--LFL-KD--VFPDAPLIGYFEFYYRASGADVGFDPEFPPSLDDRARLRMRNAHNLLALEQADA 138 (171)
T ss_pred CCCCCEEEEcCCcchh--hhH-HH--hCCCCcEEEEEEEEecCCCCcCCCCCCCCCCHHHHHHHHHHhHHHHHHHHhCCc
Confidence 3679999999988643 332 32 2234777654321 110000 011246777
Q ss_pred EEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCC
Q 036427 298 CYCPTADVAKRAMKAGLQASQIKVYGLPVRPSF 330 (536)
Q Consensus 298 vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~ 330 (536)
.++++..-+..+-.. -.+||.|+.-++|.+.
T Consensus 139 ~isPT~wQ~~~fP~~--~r~kI~VihdGiDt~~ 169 (171)
T PF12000_consen 139 GISPTRWQRSQFPAE--FRSKISVIHDGIDTDR 169 (171)
T ss_pred CcCCCHHHHHhCCHH--HHcCcEEeecccchhh
Confidence 888888766654221 1368889988888754
No 230
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=51.85 E-value=58 Score=39.16 Aligned_cols=42 Identities=26% Similarity=0.306 Sum_probs=31.4
Q ss_pred CCCceEEEEeCC---CCchH--HHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 142 DQPKKVLILMSD---TGGGH--RASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 142 ~~~mKIL~~~~~---~GgGh--~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
..++||+++.+| +|-|. ...+..++++|++. |+++++++...
T Consensus 552 ~~~kkvlilG~G~~~ig~~~efdy~~v~~i~alk~~---G~~vi~v~~np 598 (1066)
T PRK05294 552 SDRKKVLVLGSGPNRIGQGIEFDYCCVHAVLALREA---GYETIMVNCNP 598 (1066)
T ss_pred CCCceEEEECccccccccccccchhHHHHHHHHHHC---CCEEEEEeCCc
Confidence 356899999765 34343 45778889999999 89999987543
No 231
>PRK13197 pyrrolidone-carboxylate peptidase; Provisional
Probab=51.46 E-value=36 Score=32.58 Aligned_cols=29 Identities=17% Similarity=0.118 Sum_probs=20.6
Q ss_pred CceEEEEe-CCCCchHHHHHHHHHHHHHhc
Q 036427 144 PKKVLILM-SDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 144 ~mKIL~~~-~~~GgGh~~~~l~La~~L~~~ 172 (536)
|||||++. ..+|+-...+...+++.|...
T Consensus 1 m~~ILvTGF~PF~~~~~NPS~~~~~~L~~~ 30 (215)
T PRK13197 1 MMKILVTGFDPFGGEKINPSWEAVKQLPGK 30 (215)
T ss_pred CCEEEEeeccCCCCCCCCcHHHHHHHcccc
Confidence 57888876 346555677888888888654
No 232
>cd05564 PTS_IIB_chitobiose_lichenan PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. In the chitobiose system, these subunits are expressed as separate proteins from chbA, chbB, and chbC of the chb operon (formerly the cel (cellulose) operon). In the lichenan system, these subunits are expressed from licA, licB, and licC of the lic operon. The lic operon of Bacillus subtilis is required for the transport and degradation of oligomeric beta-glucosides, which are produced by extracellular enzymes on substrates such as lichenan or barley glucan. The lic operon is transcribed from a gammaA-dependent promoter and is inducible by lichenan, lichenan hydrolysate, and cellobiose. The IIB d
Probab=51.30 E-value=42 Score=27.58 Aligned_cols=66 Identities=17% Similarity=0.303 Sum_probs=39.4
Q ss_pred EEEEecCCH-------HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCC---hH-HHHH-HHHhCCcEEEecc
Q 036427 388 VLVICGRNK-------KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAG---PG-TIAE-AMIRGLPIILNDF 454 (536)
Q Consensus 388 ~lvi~G~~~-------~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG---~~-tllE-Ama~GlPVI~~~~ 454 (536)
++++||.|- .+.+.+++.++.-+|.-.+. .++...+...|++++.+- -. .+-| +.-.++||..+|.
T Consensus 2 Il~~Cg~G~sTS~~~~ki~~~~~~~~~~~~v~~~~~-~~~~~~~~~~Diil~~Pqv~~~~~~i~~~~~~~~~pv~~I~~ 79 (96)
T cd05564 2 ILLVCSAGMSTSILVKKMKKAAEKRGIDAEIEAVPE-SELEEYIDDADVVLLGPQVRYMLDEVKKKAAEYGIPVAVIDM 79 (96)
T ss_pred EEEEcCCCchHHHHHHHHHHHHHHCCCceEEEEecH-HHHHHhcCCCCEEEEChhHHHHHHHHHHHhccCCCcEEEcCh
Confidence 456666652 34445555555444444332 356667788999888762 12 2222 3457899999985
No 233
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=51.26 E-value=75 Score=38.25 Aligned_cols=41 Identities=29% Similarity=0.325 Sum_probs=30.8
Q ss_pred CCceEEEEeCC---CCchH--HHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 143 QPKKVLILMSD---TGGGH--RASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 143 ~~mKIL~~~~~---~GgGh--~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
.++||+++.++ +|-|. ...+..++++|++. |+++++++...
T Consensus 554 ~~kkvLIlG~G~~rig~~~efdy~~v~~~~aLk~~---G~~vI~vn~np 599 (1068)
T PRK12815 554 EKKKVLILGSGPIRIGQGIEFDYSSVHAAFALKKE---GYETIMINNNP 599 (1068)
T ss_pred CCceEEEecccccccccccccchhHHHHHHHHHHc---CCEEEEEeCCc
Confidence 56899999765 33333 45788889999998 89999887543
No 234
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=51.00 E-value=1.2e+02 Score=31.11 Aligned_cols=19 Identities=21% Similarity=0.489 Sum_probs=15.9
Q ss_pred HHHHHHHHhhCCCEEEEcC
Q 036427 236 REVAKGLMKYQPDIIISVH 254 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~ 254 (536)
+++.+.+++++||++|+-.
T Consensus 70 ~~i~~mv~~~~pD~viaGP 88 (349)
T PF07355_consen 70 KKILEMVKKLKPDVVIAGP 88 (349)
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 4778889999999999743
No 235
>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed
Probab=50.93 E-value=35 Score=34.21 Aligned_cols=40 Identities=30% Similarity=0.284 Sum_probs=28.8
Q ss_pred CCCceEEEEeCCCCc---hHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 142 DQPKKVLILMSDTGG---GHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 142 ~~~mKIL~~~~~~Gg---Gh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
++++||++++++-.- =....+..+.++|++. |++|.+++.
T Consensus 2 ~~~~~v~~~~g~~~~~~~~~~~s~~~i~~al~~~---g~~v~~i~~ 44 (304)
T PRK01372 2 KMFGKVAVLMGGTSAEREVSLNSGAAVLAALREA---GYDAHPIDP 44 (304)
T ss_pred CCCcEEEEEeCCCCCCceEeHHhHHHHHHHHHHC---CCEEEEEec
Confidence 566799999865321 2234778999999998 888877653
No 236
>PRK06988 putative formyltransferase; Provisional
Probab=50.85 E-value=56 Score=33.24 Aligned_cols=18 Identities=28% Similarity=0.401 Sum_probs=14.5
Q ss_pred HHHHHHHhhCCCEEEEcC
Q 036427 237 EVAKGLMKYQPDIIISVH 254 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~ 254 (536)
.+.+.+++.+||++++.+
T Consensus 68 ~~~~~l~~~~~Dliv~~~ 85 (312)
T PRK06988 68 ELRAAVAAAAPDFIFSFY 85 (312)
T ss_pred HHHHHHHhcCCCEEEEeh
Confidence 455678999999998765
No 237
>COG2086 FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion]
Probab=50.37 E-value=2e+02 Score=28.46 Aligned_cols=108 Identities=15% Similarity=0.094 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccchhhhhhhHHHHH
Q 036427 157 GHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAR 236 (536)
Q Consensus 157 Gh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (536)
-....|.+.|-.|+++ +++.+|++++..... ...........+.=...+... +.+.......-+.
T Consensus 37 ~~D~~AvEeAlrLke~-~~~~eV~vlt~Gp~~-------a~~~lr~aLAmGaDraili~d-------~~~~~~d~~~ta~ 101 (260)
T COG2086 37 PFDLNAVEEALRLKEK-GYGGEVTVLTMGPPQ-------AEEALREALAMGADRAILITD-------RAFAGADPLATAK 101 (260)
T ss_pred hhhHHHHHHHHHhhcc-CCCceEEEEEecchh-------hHHHHHHHHhcCCCeEEEEec-------ccccCccHHHHHH
Confidence 3456777788888885 567888888765421 111111111111100000000 0011112233456
Q ss_pred HHHHHHHhhCCCEEEEcC----cccchHHHHHHHHcCCCCCceEEEEecCC
Q 036427 237 EVAKGLMKYQPDIIISVH----PLMQHVPLRILRAKGLLKKIVFTTVITDL 283 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~----~~~~~i~~~~~~~~g~~~~ip~v~~~~d~ 283 (536)
.+..++++.+||+|++-. .....++..++..+| +|.+++..+.
T Consensus 102 ~Laa~~~~~~~~LVl~G~qa~D~~t~qvg~~lAe~Lg----~P~~t~v~~i 148 (260)
T COG2086 102 ALAAAVKKIGPDLVLTGKQAIDGDTGQVGPLLAELLG----WPQVTYVSKI 148 (260)
T ss_pred HHHHHHHhcCCCEEEEecccccCCccchHHHHHHHhC----CceeeeEEEE
Confidence 778889999999998632 345567888889888 7887766543
No 238
>PRK13768 GTPase; Provisional
Probab=49.60 E-value=1.3e+02 Score=29.54 Aligned_cols=40 Identities=18% Similarity=0.356 Sum_probs=31.6
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
||++.++++.-|.|-...+..++.++.+. |..|.+++...
T Consensus 1 ~~~~i~v~G~~G~GKTt~~~~~~~~l~~~---g~~v~~i~~D~ 40 (253)
T PRK13768 1 MMYIVFFLGTAGSGKTTLTKALSDWLEEQ---GYDVAIVNLDP 40 (253)
T ss_pred CcEEEEEECCCCccHHHHHHHHHHHHHhc---CCceEEEECCC
Confidence 46677777667779999999999999987 77888877543
No 239
>TIGR00655 PurU formyltetrahydrofolate deformylase. This model describes formyltetrahydrofolate deformylases. The enzyme is a homohexamer. Sequences from a related enzyme formyl tetrahydrofolate-specific enzyme, phosphoribosylglycinamide formyltransferase, serve as an outgroup for phylogenetic analysis. Putative members of this family, scoring below the trusted cutoff, include a sequence from Rhodobacter capsulatus that lacks an otherwise conserved C-terminal region.
Probab=49.40 E-value=1e+02 Score=30.76 Aligned_cols=21 Identities=19% Similarity=0.350 Sum_probs=17.0
Q ss_pred HHHHHHHHhhCCCEEEEcCcc
Q 036427 236 REVAKGLMKYQPDIIISVHPL 256 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~~ 256 (536)
..+.+++++++||+|++.+..
T Consensus 150 ~~~~~~l~~~~~Dlivlagym 170 (280)
T TIGR00655 150 KRQLELLKQYQVDLVVLAKYM 170 (280)
T ss_pred HHHHHHHHHhCCCEEEEeCch
Confidence 467788999999999987653
No 240
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=49.38 E-value=68 Score=31.02 Aligned_cols=53 Identities=19% Similarity=0.311 Sum_probs=32.3
Q ss_pred ChHHHHHHHH-hCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHh
Q 036427 435 GPGTIAEAMI-RGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWF 489 (536)
Q Consensus 435 G~~tllEAma-~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll 489 (536)
||...-|.+. .|+|+|++.-..... ..+.+.+.|.|.++-..+.+.-+=+++|
T Consensus 75 GP~~ARE~l~~~~iP~IvI~D~p~~K--~~d~l~~~g~GYIivk~DpMIGArREFL 128 (277)
T PRK00994 75 GPKKAREILKAAGIPCIVIGDAPGKK--VKDAMEEQGLGYIIVKADPMIGARREFL 128 (277)
T ss_pred CchHHHHHHHhcCCCEEEEcCCCccc--hHHHHHhcCCcEEEEecCccccchhhcc
Confidence 6777778665 689999976433322 2356889999987643333333333443
No 241
>PLN02735 carbamoyl-phosphate synthase
Probab=48.99 E-value=45 Score=40.16 Aligned_cols=40 Identities=25% Similarity=0.302 Sum_probs=30.0
Q ss_pred CCceEEEEeCCC---C--chHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 143 QPKKVLILMSDT---G--GGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 143 ~~mKIL~~~~~~---G--gGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
+.+|||++.+|. | .=+...+..++++|++. |++|++++..
T Consensus 22 ~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke~---G~~Vi~vd~n 66 (1102)
T PLN02735 22 DLKKIMILGAGPIVIGQACEFDYSGTQACKALKEE---GYEVVLINSN 66 (1102)
T ss_pred CCCEEEEECCCccccccceeecchHHHHHHHHHHc---CCEEEEEeCC
Confidence 457999998663 1 12346688899999999 9999998753
No 242
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=48.49 E-value=1.6e+02 Score=29.34 Aligned_cols=79 Identities=24% Similarity=0.162 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECCChH------
Q 036427 366 EATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKAGPG------ 437 (536)
Q Consensus 366 ~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~------ 437 (536)
+.++.++.+.+ .++..+++++.+..+..+.. +|.-.... .++...+..+|++|..+|+.
T Consensus 15 e~~l~~~l~~l------~~~~~~~v~s~~p~~~~~~~-------~v~~~~r~~~~~~~~~l~~~D~vI~gGG~l~~d~~~ 81 (298)
T TIGR03609 15 EALLAALLREL------PPGVEPTVLSNDPAETAKLY-------GVEAVNRRSLLAVLRALRRADVVIWGGGSLLQDVTS 81 (298)
T ss_pred HHHHHHHHHhc------CCCCeEEEecCChHHHHhhc-------CceEEccCCHHHHHHHHHHCCEEEECCcccccCCcc
Confidence 44555555444 35666666655443332221 23333333 36777889999999876421
Q ss_pred ---------HHHHHHHhCCcEEEeccCCc
Q 036427 438 ---------TIAEAMIRGLPIILNDFIAG 457 (536)
Q Consensus 438 ---------tllEAma~GlPVI~~~~~~~ 457 (536)
.+.-|..+|+|+++....-+
T Consensus 82 ~~~~~~~~~~~~~a~~~~k~~~~~g~giG 110 (298)
T TIGR03609 82 FRSLLYYLGLMRLARLFGKPVILWGQGIG 110 (298)
T ss_pred cccHHHHHHHHHHHHHcCCCEEEEecccC
Confidence 12335678999999887543
No 243
>PRK13789 phosphoribosylamine--glycine ligase; Provisional
Probab=48.13 E-value=62 Score=34.50 Aligned_cols=18 Identities=22% Similarity=0.091 Sum_probs=14.2
Q ss_pred HHHHHHHhhCCCEEEEcC
Q 036427 237 EVAKGLMKYQPDIIISVH 254 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~ 254 (536)
.+.++++++++|+|+...
T Consensus 59 ~l~~~a~~~~iD~Vv~g~ 76 (426)
T PRK13789 59 SVQSFLKSNPFDLIVVGP 76 (426)
T ss_pred HHHHHHHHcCCCEEEECC
Confidence 566778889999998754
No 244
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=47.93 E-value=2.1e+02 Score=30.23 Aligned_cols=99 Identities=21% Similarity=0.168 Sum_probs=54.5
Q ss_pred CCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHc-CCCCCCEEEecCh--hhHHHHHh
Q 036427 349 DLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLS-TDWKIPVQVKGFV--SKMEEAMG 425 (536)
Q Consensus 349 ~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~-~~~~~~V~~~G~v--~~l~~ll~ 425 (536)
+.|.|-+.+.+.|.- ..+..+.+.+++ ..|++.+++.+++..- .+..++ .+....+.++++- .-+..+++
T Consensus 48 ~~p~vWiHaaSVGEv---~a~~pLv~~l~~---~~P~~~ilvTt~T~Tg-~e~a~~~~~~~v~h~YlP~D~~~~v~rFl~ 120 (419)
T COG1519 48 EGPLVWIHAASVGEV---LAALPLVRALRE---RFPDLRILVTTMTPTG-AERAAALFGDSVIHQYLPLDLPIAVRRFLR 120 (419)
T ss_pred CCCeEEEEecchhHH---HHHHHHHHHHHH---hCCCCCEEEEecCccH-HHHHHHHcCCCeEEEecCcCchHHHHHHHH
Confidence 446666666666631 233444444443 3688888777766431 122222 1211233333331 12333332
Q ss_pred --hcCe-EEECC--ChHHHHHHHHhCCcEEEecc
Q 036427 426 --ACDC-IITKA--GPGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 426 --~aDv-~V~~s--G~~tllEAma~GlPVI~~~~ 454 (536)
..|+ +++-+ .|+++.|+-..|+|++..+.
T Consensus 121 ~~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNa 154 (419)
T COG1519 121 KWRPKLLIIMETELWPNLINELKRRGIPLVLVNA 154 (419)
T ss_pred hcCCCEEEEEeccccHHHHHHHHHcCCCEEEEee
Confidence 3454 55556 49999999999999999875
No 245
>TIGR02049 gshA_ferroox glutamate--cysteine ligase, T. ferrooxidans family. This family consists of a rare family of glutamate--cysteine ligases, demonstrated first in Thiobacillus ferrooxidans and present in a few other Proteobacteria. It is the first of two enzymes for glutathione biosynthesis. It is also called gamma-glutamylcysteine synthetase.
Probab=47.90 E-value=7.6 Score=39.82 Aligned_cols=171 Identities=18% Similarity=0.235 Sum_probs=97.0
Q ss_pred ccceeeeecc-ccC------CCCCcccCCCcccccCCcccCCCCCC--------CCceEEEEeCCC--CchHHHHHHHHH
Q 036427 104 LPIGFASVGI-NSS------ERNGIRDENGGVLEDEGLPLNGIEND--------QPKKVLILMSDT--GGGHRASAEAIK 166 (536)
Q Consensus 104 ~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~mKIL~~~~~~--GgGh~~~~l~La 166 (536)
-|.=++||-+ |+| +.| +--.|+-.++.+.+|+.-+-.+ ..+|||++.-+. ..-=...+.+|.
T Consensus 23 ~~PfY~SVDlRNaGfKlAPVDtN-LFPaGfNNL~~~~~plavqa~~~aiek~cp~a~~vLlIpEnHTRN~fYl~nv~~L~ 101 (403)
T TIGR02049 23 TPPFYSSVDLRNAGYKIAPVDTN-LFPAGFNNLNPEFRPLAARAIQSYFKRHCPGAKKVLIIPENHTRNKFYLENVARLE 101 (403)
T ss_pred CCCceEEEEecccCCcccccccc-CCccccccCCHHHHHHHHHHHHHHHHHhCcccceEEEecCCCcchHHHHHHHHHHH
Confidence 3555667754 222 222 4556777799999998544432 237999997442 112334566788
Q ss_pred HHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccchhhhhhhHHHHHHHHHHHHhhC
Q 036427 167 AAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQ 246 (536)
Q Consensus 167 ~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~k 246 (536)
+-|.+. |.+|.++++..+.. ..+ .++.. ......|+.+ . .+++ .++.+.
T Consensus 102 ~Il~~A---G~~VriGsl~pei~-~~~-~l~~G--~~l~lepl~r-----~-----------------~~rl--~~~~F~ 150 (403)
T TIGR02049 102 EILRLA---GLEVRLGSLYNEVY-TVL-DLPYG--TVLLLEPLLR-----D-----------------DRRL--TTDGFD 150 (403)
T ss_pred HHHHHc---CceEEeccCCccce-eEE-ECCCC--CEEEEEeeec-----c-----------------CCEE--ecCCcc
Confidence 889998 89999988754322 000 01000 0000011111 0 0111 366789
Q ss_pred CCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEcCHHHHHHHHH-hCCCCC
Q 036427 247 PDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMK-AGLQAS 317 (536)
Q Consensus 247 PDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~~~~~~l~~-~g~~~~ 317 (536)
||+|+....+..++|-.+ +-. ...-+| ..|..|..+.-...+..-+++++.+.+ .++++-
T Consensus 151 Pc~ILLNNDLS~GiP~iL-~~l-~Q~ilP---------pl~~GW~~RrKS~hF~~Y~~va~eF~~~~~IDPW 211 (403)
T TIGR02049 151 PCVILLNNDLSAGIPDIL-KGI-KQDILP---------PLHAGWHSRRKSNHFEAYQEVASEFAKLIGIDPW 211 (403)
T ss_pred ccEEEeecCcccCChHHH-hCC-cccccC---------ccccCcccccccchhHHHHHHHHHHHHHhCCCcc
Confidence 999999988877776543 211 111122 256678877777778777777777665 477653
No 246
>PF03641 Lysine_decarbox: Possible lysine decarboxylase; InterPro: IPR005269 This entry represents a cytokinin-activating enzyme working in the direct activation pathway. It is a phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms [, ]. The proteins in this entry belong to the LOG family of proteins.; PDB: 1YDH_B 2Q4D_A 1RCU_C 1WEH_B 3SBX_F 3BQ9_B 2PMB_D 3GH1_D 1WEK_C 3QUA_A ....
Probab=47.31 E-value=74 Score=27.80 Aligned_cols=45 Identities=27% Similarity=0.392 Sum_probs=29.8
Q ss_pred EEEecChhhHHHHHhhcCeEEE-CCChHHHHHHHHh---------CC-cEEEeccC
Q 036427 411 VQVKGFVSKMEEAMGACDCIIT-KAGPGTIAEAMIR---------GL-PIILNDFI 455 (536)
Q Consensus 411 V~~~G~v~~l~~ll~~aDv~V~-~sG~~tllEAma~---------Gl-PVI~~~~~ 455 (536)
+.+....+....++..||++|. |+|.+|+-|.+.. .+ |+|+.+..
T Consensus 38 ~~~~~~~~Rk~~m~~~sda~I~lPGG~GTl~El~~~~~~~~l~~~~~~Piil~~~~ 93 (133)
T PF03641_consen 38 IIVDDMFERKEIMIESSDAFIALPGGIGTLDELFEALTLMQLGRHNKVPIILLNID 93 (133)
T ss_dssp EEESSHHHHHHHHHHHESEEEEES-SHHHHHHHHHHHHHHHTTSSTS-EEEEEECG
T ss_pred eEeCChHHHHHHHHHhCCEEEEEecCCchHHHHHHHHHHHhhccccCCCEEEeCCc
Confidence 3444444667788899998665 5567888774322 35 99999864
No 247
>PRK06756 flavodoxin; Provisional
Probab=47.14 E-value=38 Score=29.97 Aligned_cols=38 Identities=21% Similarity=0.402 Sum_probs=28.1
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
||||+++-.+.-|-....+..+++.|.+. |++|.+.+.
T Consensus 1 mmkv~IiY~S~tGnTe~vA~~ia~~l~~~---g~~v~~~~~ 38 (148)
T PRK06756 1 MSKLVMIFASMSGNTEEMADHIAGVIRET---ENEIEVIDI 38 (148)
T ss_pred CceEEEEEECCCchHHHHHHHHHHHHhhc---CCeEEEeeh
Confidence 47999886443267777788999999877 777776654
No 248
>PLN02929 NADH kinase
Probab=47.03 E-value=62 Score=32.72 Aligned_cols=69 Identities=12% Similarity=0.212 Sum_probs=45.6
Q ss_pred HHHhhcCeEEECCChHHHHHHHH---hCCcEEEeccCCccccC---ChhhHhh-CCceeecC-CHHHHHHHHHHHhC
Q 036427 422 EAMGACDCIITKAGPGTIAEAMI---RGLPIILNDFIAGQEAG---NVPYVVE-NGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 422 ~ll~~aDv~V~~sG~~tllEAma---~GlPVI~~~~~~~~e~~---na~~lv~-~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
.....+|++|+-+|-+|++-|+. .++||+.++.+..+..+ .....-+ ...|+++. +++++.+.+.++++
T Consensus 60 ~~~~~~Dlvi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~~~r~lGfL~~~~~~~~~~~L~~il~ 136 (301)
T PLN02929 60 QPIRDVDLVVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFDARRSTGHLCAATAEDFEQVLDDVLF 136 (301)
T ss_pred cccCCCCEEEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccccccCccccccCCHHHHHHHHHHHHc
Confidence 34567899999988788887644 47899999975321100 0000111 13567765 78999999999987
No 249
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=46.68 E-value=2.6e+02 Score=26.40 Aligned_cols=76 Identities=20% Similarity=0.359 Sum_probs=42.1
Q ss_pred HHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEcCHHHHHHHHHhC
Q 036427 234 IAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAG 313 (536)
Q Consensus 234 ~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~~~~~~l~~~g 313 (536)
+...+.+.+++.+||+|++-+..-.--|.++.+..| +|. . .||..+-.+.- -...++..+.|
T Consensus 67 ~d~~l~~~l~~~~~dlvvLAGyMrIL~~~fl~~~~g---rIl--N-------IHPSLLP~f~G------~h~~~~A~~aG 128 (200)
T COG0299 67 FDRALVEALDEYGPDLVVLAGYMRILGPEFLSRFEG---RIL--N-------IHPSLLPAFPG------LHAHEQALEAG 128 (200)
T ss_pred HHHHHHHHHHhcCCCEEEEcchHHHcCHHHHHHhhc---ceE--e-------cCcccccCCCC------chHHHHHHHcC
Confidence 446888899999999999887542222455555444 122 2 44444333322 34455566666
Q ss_pred CCC--CCEEEeCCCCC
Q 036427 314 LQA--SQIKVYGLPVR 327 (536)
Q Consensus 314 ~~~--~ki~vignpv~ 327 (536)
.+. .-++++--.+|
T Consensus 129 ~k~sG~TVH~V~e~vD 144 (200)
T COG0299 129 VKVSGCTVHFVTEGVD 144 (200)
T ss_pred CCccCcEEEEEccCCC
Confidence 553 23555544443
No 250
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=46.61 E-value=1.4e+02 Score=27.40 Aligned_cols=65 Identities=25% Similarity=0.338 Sum_probs=40.5
Q ss_pred EEEecCCH----HHHHHHHcCCCCCCEEEecCh-hhHHHHHhhcCeEEECCC-hHHHHHHHHhCCcEEEeccCC
Q 036427 389 LVICGRNK----KLANKLLSTDWKIPVQVKGFV-SKMEEAMGACDCIITKAG-PGTIAEAMIRGLPIILNDFIA 456 (536)
Q Consensus 389 lvi~G~~~----~l~~~l~~~~~~~~V~~~G~v-~~l~~ll~~aDv~V~~sG-~~tllEAma~GlPVI~~~~~~ 456 (536)
+++.|.+. ...+.+.+.+. +|.+..+. +++.+.+..||++|+..+ +. ++..-..--..+++|...
T Consensus 47 vlViG~G~~~G~~~a~~L~~~g~--~V~v~~r~~~~l~~~l~~aDiVIsat~~~~-ii~~~~~~~~~viIDla~ 117 (168)
T cd01080 47 VVVVGRSNIVGKPLAALLLNRNA--TVTVCHSKTKNLKEHTKQADIVIVAVGKPG-LVKGDMVKPGAVVIDVGI 117 (168)
T ss_pred EEEECCcHHHHHHHHHHHhhCCC--EEEEEECCchhHHHHHhhCCEEEEcCCCCc-eecHHHccCCeEEEEccC
Confidence 34446554 24455555433 46666665 588999999999999886 45 444333444577777543
No 251
>PF01993 MTD: methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase; InterPro: IPR002844 This archaeal enzyme family is involved in formation of methane from carbon dioxide 1.5.99.9 from EC. The enzyme requires coenzyme F420 [].; GO: 0008901 ferredoxin hydrogenase activity, 0015948 methanogenesis, 0055114 oxidation-reduction process; PDB: 1U6I_D 3IQF_G 1QV9_C 3IQE_F 1U6J_G 3IQZ_D 1U6K_B.
Probab=46.32 E-value=39 Score=32.64 Aligned_cols=94 Identities=18% Similarity=0.337 Sum_probs=43.9
Q ss_pred ChHHHHHHH-HhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHH
Q 036427 435 GPGTIAEAM-IRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVF 513 (536)
Q Consensus 435 G~~tllEAm-a~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~ 513 (536)
||...-|.+ +.|+|+|++.-..... .-+.+.+.|.|.++-..+.+.-+=+++| ||.....+-....+-....+..
T Consensus 74 GP~~ARE~l~~~~iP~IvI~D~p~~k--~kd~l~~~g~GYIivk~DpMIGArREFL--DP~EMa~fNaD~~kVLa~tGa~ 149 (276)
T PF01993_consen 74 GPTKAREMLSAKGIPCIVISDAPTKK--AKDALEEEGFGYIIVKADPMIGARREFL--DPVEMALFNADVLKVLAITGAF 149 (276)
T ss_dssp HHHHHHHHHHHSSS-EEEEEEGGGGG--GHHHHHHTT-EEEEETTS------TTT----HHHHHHHHHHHHHHHHHTTHH
T ss_pred CcHHHHHHHHhCCCCEEEEcCCCchh--hHHHHHhcCCcEEEEecCcccccccccc--CHHHHHHhhhhHHHHHHhhhHH
Confidence 577777876 6899999876432221 2456889999987643333444444444 3544444433333322223333
Q ss_pred H-HHHHHHHHHhh-----cCCcCCC
Q 036427 514 R-IVQDLHELVRQ-----RNFVPHY 532 (536)
Q Consensus 514 ~-i~~~i~~l~~~-----~~~~~~~ 532 (536)
| +-++|..++.+ ...+||+
T Consensus 150 RlvQ~elD~vi~~v~~Gk~~~LPki 174 (276)
T PF01993_consen 150 RLVQEELDKVIDQVKAGKEPELPKI 174 (276)
T ss_dssp HHHHHHHHHHHHHHTTT-GGGS-EE
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCeE
Confidence 3 33333333332 3566664
No 252
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=46.09 E-value=51 Score=33.30 Aligned_cols=55 Identities=20% Similarity=0.238 Sum_probs=42.3
Q ss_pred HHHhhcCeEEECCChHHHHHHHH----hCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 422 EAMGACDCIITKAGPGTIAEAMI----RGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 422 ~ll~~aDv~V~~sG~~tllEAma----~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
++-..+|++|+-+|-+|++.|+. .++|++.++.+ ..|++.+ +++++.++++++++
T Consensus 64 ~~~~~~D~vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL~~~~~~~~~~~l~~i~~ 123 (296)
T PRK04539 64 ELGQYCDLVAVLGGDGTFLSVAREIAPRAVPIIGINQG--------------HLGFLTQIPREYMTDKLLPVLE 123 (296)
T ss_pred hcCcCCCEEEEECCcHHHHHHHHHhcccCCCEEEEecC--------------CCeEeeccCHHHHHHHHHHHHc
Confidence 33346899999998888888764 37899998732 2566665 78999999999987
No 253
>COG0716 FldA Flavodoxins [Energy production and conversion]
Probab=44.52 E-value=34 Score=30.53 Aligned_cols=33 Identities=24% Similarity=0.372 Sum_probs=27.2
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEE
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQV 179 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV 179 (536)
||||+|+-..+.|.....|..+++.|.+. ++++
T Consensus 1 M~ki~Ivy~S~tGnTe~vA~~i~~~l~~~---~~~~ 33 (151)
T COG0716 1 MMKILIVYGSRTGNTEKVAEIIAEELGAD---GFEV 33 (151)
T ss_pred CCeEEEEEEcCCCcHHHHHHHHHHHhccC---CceE
Confidence 68999987665578899999999999887 6666
No 254
>PLN02727 NAD kinase
Probab=44.32 E-value=2.7e+02 Score=32.68 Aligned_cols=57 Identities=14% Similarity=0.121 Sum_probs=43.3
Q ss_pred HHHHHhhcCeEEECCChHHHHHHHHh----CCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 420 MEEAMGACDCIITKAGPGTIAEAMIR----GLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 420 l~~ll~~aDv~V~~sG~~tllEAma~----GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
..++...+|++|+-+|-+|++.|... ++||+.++.+ ..|++.+ +++++.+.|.++++
T Consensus 737 ~~el~~~~DLVIvLGGDGTlLrAar~~~~~~iPILGINlG--------------rLGFLTdi~~ee~~~~L~~Il~ 798 (986)
T PLN02727 737 TSDLHERVDFVACLGGDGVILHASNLFRGAVPPVVSFNLG--------------SLGFLTSHYFEDFRQDLRQVIH 798 (986)
T ss_pred hhhcccCCCEEEEECCcHHHHHHHHHhcCCCCCEEEEeCC--------------CccccccCCHHHHHHHHHHHHc
Confidence 34455679999999988889887664 6899987732 2455554 78899999999987
No 255
>PRK13010 purU formyltetrahydrofolate deformylase; Reviewed
Probab=44.17 E-value=1.2e+02 Score=30.62 Aligned_cols=20 Identities=0% Similarity=0.079 Sum_probs=16.6
Q ss_pred HHHHHHHHhhCCCEEEEcCc
Q 036427 236 REVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~ 255 (536)
..+.++|++++||+|++.+.
T Consensus 159 ~~~~~~l~~~~~Dlivlagy 178 (289)
T PRK13010 159 AQILDLIETSGAELVVLARY 178 (289)
T ss_pred HHHHHHHHHhCCCEEEEehh
Confidence 36678899999999998764
No 256
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=44.10 E-value=1.1e+02 Score=27.55 Aligned_cols=37 Identities=19% Similarity=0.217 Sum_probs=29.6
Q ss_pred EEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 147 VLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 147 IL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|++....-|-|-...+..||..|.+. |..|.++|...
T Consensus 2 i~v~s~kgG~GKTt~a~~LA~~la~~---g~~vllvD~D~ 38 (169)
T cd02037 2 IAVMSGKGGVGKSTVAVNLALALAKL---GYKVGLLDADI 38 (169)
T ss_pred EEEecCCCcCChhHHHHHHHHHHHHc---CCcEEEEeCCC
Confidence 45555555569999999999999998 88999998743
No 257
>COG2039 Pcp Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) [Posttranslational modification, protein turnover, chaperones]
Probab=43.57 E-value=64 Score=30.16 Aligned_cols=69 Identities=16% Similarity=0.199 Sum_probs=43.1
Q ss_pred ceEEEEe-CCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccccc
Q 036427 145 KKVLILM-SDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIH 223 (536)
Q Consensus 145 mKIL~~~-~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 223 (536)
||||++. ..+|+=...+....+++|..+--+|++|.-.- ++..|.
T Consensus 1 ~kvLvTGFePF~~~~~NPs~e~vk~L~~~~i~g~~V~~~~------------lP~~f~---------------------- 46 (207)
T COG2039 1 MKVLVTGFEPFGGEPINPSWEAVKELNGRIIGGAEVKGRI------------LPVVFK---------------------- 46 (207)
T ss_pred CeEEEEeccCCCCCCCChHHHHHHhcCcccccCceEEEEE------------cCccHH----------------------
Confidence 5788776 44766777888888888876621233332211 111211
Q ss_pred chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcc
Q 036427 224 QSNFAATSTFIAREVAKGLMKYQPDIIISVHPL 256 (536)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~ 256 (536)
.....+.+.|.+.+||+|++.+..
T Consensus 47 ---------~s~~~l~~~i~~~qPd~vl~iG~A 70 (207)
T COG2039 47 ---------KSIDALVQAIAEVQPDLVLAIGQA 70 (207)
T ss_pred ---------HHHHHHHHHHHhhCCCeEEEeccc
Confidence 012366788999999999998754
No 258
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=43.42 E-value=52 Score=33.35 Aligned_cols=55 Identities=16% Similarity=0.244 Sum_probs=41.7
Q ss_pred HHHhhcCeEEECCChHHHHHHHHh----CCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 422 EAMGACDCIITKAGPGTIAEAMIR----GLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 422 ~ll~~aDv~V~~sG~~tllEAma~----GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
.+-..+|++|+-+|-+|++.|+.. ++|++.++.+ ..|++.+ +++++.++++++++
T Consensus 64 ~~~~~~Dlvi~iGGDGTlL~aar~~~~~~iPilGIN~G--------------~lGFLt~~~~~~~~~~l~~l~~ 123 (305)
T PRK02649 64 GFDSSMKFAIVLGGDGTVLSAARQLAPCGIPLLTINTG--------------HLGFLTEAYLNQLDEAIDQVLA 123 (305)
T ss_pred hcccCcCEEEEEeCcHHHHHHHHHhcCCCCcEEEEeCC--------------CCcccccCCHHHHHHHHHHHHc
Confidence 334468999999888888887664 7899997732 2455554 78899999999987
No 259
>COG3414 SgaB Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism]
Probab=43.11 E-value=1.1e+02 Score=25.14 Aligned_cols=47 Identities=21% Similarity=0.388 Sum_probs=31.2
Q ss_pred EEEEEecCCH--------HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC
Q 036427 387 QVLVICGRNK--------KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA 434 (536)
Q Consensus 387 ~~lvi~G~~~--------~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s 434 (536)
+++++||.|- ..++.++++++...+...- +++.......+|++|+..
T Consensus 3 KIL~aCG~GvgSS~~ik~kve~~l~~~gi~~~~~~~~-v~~~~~~~~~aDiiv~s~ 57 (93)
T COG3414 3 KILAACGNGVGSSTMIKMKVEEVLKELGIDVDVEQCA-VDEIKALTDGADIIVTST 57 (93)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHHcCCCceeeeEE-ecccccCCCcccEEEEeh
Confidence 5788888873 4556677777653333221 356778888999999864
No 260
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=43.07 E-value=60 Score=32.21 Aligned_cols=52 Identities=19% Similarity=0.256 Sum_probs=40.2
Q ss_pred hhcCeEEECCChHHHHHHHH------hCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 425 GACDCIITKAGPGTIAEAMI------RGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 425 ~~aDv~V~~sG~~tllEAma------~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
..+|++|+-+|-+|++.|+. .++|++.++. ...|++.+ +++++.+.++++++
T Consensus 34 ~~~Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~--------------G~lGFL~~~~~~~~~~~l~~i~~ 92 (265)
T PRK04885 34 KNPDIVISVGGDGTLLSAFHRYENQLDKVRFVGVHT--------------GHLGFYTDWRPFEVDKLVIALAK 92 (265)
T ss_pred cCCCEEEEECCcHHHHHHHHHhcccCCCCeEEEEeC--------------CCceecccCCHHHHHHHHHHHHc
Confidence 36799999988889998875 4889999773 22455554 78889999999887
No 261
>PRK00865 glutamate racemase; Provisional
Probab=42.84 E-value=3.4e+02 Score=26.67 Aligned_cols=37 Identities=16% Similarity=0.217 Sum_probs=26.9
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
+.++|.|+=+|.| | +++.+++++.+|+..-+++.|..
T Consensus 4 ~~~~IgvfDSGiG-G-----Ltvl~~i~~~lp~~~~iY~~D~~ 40 (261)
T PRK00865 4 MNAPIGVFDSGVG-G-----LTVLREIRRLLPDEHIIYVGDTA 40 (261)
T ss_pred CCCeEEEEECCcc-H-----HHHHHHHHHHCCCCCEEEEecCC
Confidence 4467999999994 3 45567777777877777888763
No 262
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=42.70 E-value=59 Score=32.77 Aligned_cols=55 Identities=24% Similarity=0.367 Sum_probs=41.8
Q ss_pred HHHhhcCeEEECCChHHHHHHHH----hCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 422 EAMGACDCIITKAGPGTIAEAMI----RGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 422 ~ll~~aDv~V~~sG~~tllEAma----~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
++...+|++|+-+|-+|++.|+. .++|++.++.+ ..|++.+ +++++.+.++++++
T Consensus 60 ~~~~~~dlvi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFLt~~~~~~~~~~l~~i~~ 119 (292)
T PRK01911 60 ELDGSADMVISIGGDGTFLRTATYVGNSNIPILGINTG--------------RLGFLATVSKEEIEETIDELLN 119 (292)
T ss_pred hcccCCCEEEEECCcHHHHHHHHHhcCCCCCEEEEecC--------------CCCcccccCHHHHHHHHHHHHc
Confidence 33446899999988888888776 37899998742 2455555 78899999999987
No 263
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=42.67 E-value=64 Score=32.74 Aligned_cols=53 Identities=17% Similarity=0.356 Sum_probs=41.2
Q ss_pred HhhcCeEEECCChHHHHHHHHh----CCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 424 MGACDCIITKAGPGTIAEAMIR----GLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 424 l~~aDv~V~~sG~~tllEAma~----GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
...+|++|+-+|-+|++.|... ++|++.++.+ ..|++.+ +++++.++++++++
T Consensus 70 ~~~~D~vi~lGGDGT~L~aar~~~~~~~PilGIN~G--------------~lGFL~~~~~~~~~~~l~~i~~ 127 (306)
T PRK03372 70 ADGCELVLVLGGDGTILRAAELARAADVPVLGVNLG--------------HVGFLAEAEAEDLDEAVERVVD 127 (306)
T ss_pred ccCCCEEEEEcCCHHHHHHHHHhccCCCcEEEEecC--------------CCceeccCCHHHHHHHHHHHHc
Confidence 3468999999888888887654 7899998732 2456665 78899999999987
No 264
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=42.31 E-value=58 Score=32.69 Aligned_cols=55 Identities=16% Similarity=0.182 Sum_probs=40.7
Q ss_pred HHHhhcCeEEECCChHHHHHHHH----hCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 422 EAMGACDCIITKAGPGTIAEAMI----RGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 422 ~ll~~aDv~V~~sG~~tllEAma----~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
++...+|++|+-+|-+|++.|+. .++|++.++.+ ..|++.+ +++++.++++++++
T Consensus 60 ~~~~~~Dlvi~iGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFLt~~~~~~~~~~l~~i~~ 119 (287)
T PRK14077 60 ELFKISDFLISLGGDGTLISLCRKAAEYDKFVLGIHAG--------------HLGFLTDITVDEAEKFFQAFFQ 119 (287)
T ss_pred hcccCCCEEEEECCCHHHHHHHHHhcCCCCcEEEEeCC--------------CcccCCcCCHHHHHHHHHHHHc
Confidence 33457899999888888887654 37899997732 2455554 78899999999887
No 265
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=42.21 E-value=51 Score=39.62 Aligned_cols=40 Identities=25% Similarity=0.342 Sum_probs=29.9
Q ss_pred CCCceEEEEeCCC---C--chHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 142 DQPKKVLILMSDT---G--GGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 142 ~~~mKIL~~~~~~---G--gGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.+.+|||++.+|- | .=+...+..++++|++. |++|++++.
T Consensus 5 ~~~~kvlviG~G~~~igq~~E~d~sg~q~~~aL~e~---G~~vi~v~~ 49 (1068)
T PRK12815 5 TDIQKILVIGSGPIVIGQAAEFDYSGTQACLALKEE---GYQVVLVNP 49 (1068)
T ss_pred CCCCEEEEECCCcchhcchhhhhhHHHHHHHHHHHc---CCEEEEEeC
Confidence 3457999998663 2 22445778899999999 899998874
No 266
>PRK11519 tyrosine kinase; Provisional
Probab=41.22 E-value=3.8e+02 Score=30.75 Aligned_cols=39 Identities=15% Similarity=0.201 Sum_probs=30.7
Q ss_pred CceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
+-|++.+++. -|-|-...+..||..|.+. |..|+++|..
T Consensus 525 ~~kvi~vts~~~geGKTt~a~nLA~~la~~---g~rvLlID~D 564 (719)
T PRK11519 525 QNNVLMMTGVSPSIGKTFVCANLAAVISQT---NKRVLLIDCD 564 (719)
T ss_pred CceEEEEECCCCCCCHHHHHHHHHHHHHhC---CCcEEEEeCC
Confidence 3466666654 4469999999999999998 8899998754
No 267
>PLN02735 carbamoyl-phosphate synthase
Probab=40.84 E-value=62 Score=38.99 Aligned_cols=43 Identities=23% Similarity=0.300 Sum_probs=32.0
Q ss_pred CCCceEEEEeCC---CCchHH--HHHHHHHHHHHhccCCceEEEEeecccc
Q 036427 142 DQPKKVLILMSD---TGGGHR--ASAEAIKAAFHEKFGNEYQVFVTDLWSD 187 (536)
Q Consensus 142 ~~~mKIL~~~~~---~GgGh~--~~~l~La~~L~~~~g~g~eV~v~~~~~~ 187 (536)
..++||+++.+| .|-|.+ ..+...+++|++. |+++++++...+
T Consensus 572 ~~~kkvlilG~G~~~igq~iefd~~~v~~~~alr~~---G~~tI~v~~npe 619 (1102)
T PLN02735 572 TNKKKVLILGGGPNRIGQGIEFDYCCCHASFALQDA---GYETIMMNSNPE 619 (1102)
T ss_pred CCCceEEEeCccccccCcccccceeHHHHHHHHHHc---CCeEEEEeCCCc
Confidence 456899999866 443444 6677788999999 999998876544
No 268
>PRK09590 celB cellobiose phosphotransferase system IIB component; Reviewed
Probab=40.73 E-value=1.4e+02 Score=25.06 Aligned_cols=67 Identities=19% Similarity=0.206 Sum_probs=37.5
Q ss_pred EEEEEecCCH-------HHHHHHHcCCCCCCEEEecChhhHHHHHh--hcCeEEECCC---hH-HHHH-HHHhCCcEEEe
Q 036427 387 QVLVICGRNK-------KLANKLLSTDWKIPVQVKGFVSKMEEAMG--ACDCIITKAG---PG-TIAE-AMIRGLPIILN 452 (536)
Q Consensus 387 ~~lvi~G~~~-------~l~~~l~~~~~~~~V~~~G~v~~l~~ll~--~aDv~V~~sG---~~-tllE-Ama~GlPVI~~ 452 (536)
+++++||.|- .+.+.+++.++.-.+.-.+. .++..... .+|++++.+- -. .+-+ +...|+||.++
T Consensus 3 kILlvCg~G~STSlla~k~k~~~~e~gi~~~i~a~~~-~e~~~~~~~~~~DvIll~PQi~~~~~~i~~~~~~~~ipv~~I 81 (104)
T PRK09590 3 KALIICAAGMSSSMMAKKTTEYLKEQGKDIEVDAITA-TEGEKAIAAAEYDLYLVSPQTKMYFKQFEEAGAKVGKPVVQI 81 (104)
T ss_pred EEEEECCCchHHHHHHHHHHHHHHHCCCceEEEEecH-HHHHHhhccCCCCEEEEChHHHHHHHHHHHHhhhcCCCEEEe
Confidence 3567777663 33444555555433333332 35555543 5899988762 11 2222 23579999998
Q ss_pred cc
Q 036427 453 DF 454 (536)
Q Consensus 453 ~~ 454 (536)
|.
T Consensus 82 ~~ 83 (104)
T PRK09590 82 PP 83 (104)
T ss_pred CH
Confidence 84
No 269
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=40.71 E-value=2e+02 Score=27.95 Aligned_cols=21 Identities=33% Similarity=0.542 Sum_probs=16.0
Q ss_pred HHHHHHHhhCCCEEEEcCccc
Q 036427 237 EVAKGLMKYQPDIIISVHPLM 257 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~~~~ 257 (536)
...+.+++++||++|..+|..
T Consensus 51 ~~~~~~~~~~pDf~i~isPN~ 71 (277)
T PRK00994 51 VVKKMLEEWKPDFVIVISPNP 71 (277)
T ss_pred HHHHHHHhhCCCEEEEECCCC
Confidence 344567899999999988764
No 270
>PRK06395 phosphoribosylamine--glycine ligase; Provisional
Probab=40.53 E-value=55 Score=34.99 Aligned_cols=19 Identities=16% Similarity=0.090 Sum_probs=15.4
Q ss_pred HHHHHHHHhhCCCEEEEcC
Q 036427 236 REVAKGLMKYQPDIIISVH 254 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~ 254 (536)
..+.++++++++|+|++..
T Consensus 55 e~l~~~~~~~~id~Vi~~~ 73 (435)
T PRK06395 55 DLIEDFALKNNVDIVFVGP 73 (435)
T ss_pred HHHHHHHHHhCCCEEEECC
Confidence 4677889999999998754
No 271
>PRK06703 flavodoxin; Provisional
Probab=40.40 E-value=53 Score=29.17 Aligned_cols=38 Identities=21% Similarity=0.360 Sum_probs=28.1
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
||||+++-....|-....+..|++.|.+. +++|.+.+.
T Consensus 1 mmkv~IiY~S~tGnT~~iA~~ia~~l~~~---g~~v~~~~~ 38 (151)
T PRK06703 1 MAKILIAYASMSGNTEDIADLIKVSLDAF---DHEVVLQEM 38 (151)
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhc---CCceEEEeh
Confidence 47888876544367788888999999876 677777654
No 272
>TIGR00486 YbgI_SA1388 dinuclear metal center protein, YbgI/SA1388 family. The characterization of this family of uncharacterized proteins as orthologous is tentative. Members are found in all three domains of life. Several members (from Bacillus subtilis, Listeria monocytogenes, and Mycobacterium tuberculosis - all classified as Firmicutes within the Eubacteria) share a long insert relative to other members.
Probab=40.27 E-value=3.6e+02 Score=26.28 Aligned_cols=30 Identities=27% Similarity=0.100 Sum_probs=23.3
Q ss_pred hhcCeEEECCC-hHHHHHHHHhCCcEEEecc
Q 036427 425 GACDCIITKAG-PGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 425 ~~aDv~V~~sG-~~tllEAma~GlPVI~~~~ 454 (536)
..||++|+.-. .....+|...|+.+|...+
T Consensus 187 ~gaD~~ITGd~k~h~~~~A~~~gi~li~~gH 217 (249)
T TIGR00486 187 EGVDAYITGDLSHHTAHLARELGLNVIDAGH 217 (249)
T ss_pred cCCCEEEecCCchHHHHHHHHCCCEEEEcCc
Confidence 46899887653 6678889999998888764
No 273
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=39.80 E-value=46 Score=40.01 Aligned_cols=40 Identities=28% Similarity=0.341 Sum_probs=29.2
Q ss_pred CCCceEEEEeCCC---C--chHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 142 DQPKKVLILMSDT---G--GGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 142 ~~~mKIL~~~~~~---G--gGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
..++|||++.+|. | +=....+..++++|++. |++|++++.
T Consensus 5 ~~~~kvLiig~G~~~igq~~e~d~sg~~~~~aLke~---G~~vi~v~~ 49 (1066)
T PRK05294 5 TDIKKILIIGSGPIVIGQACEFDYSGTQACKALREE---GYRVVLVNS 49 (1066)
T ss_pred CCCCEEEEECCchhhhcccccccchHHHHHHHHHHc---CCEEEEEcC
Confidence 3568999997662 1 11345667889999998 899999875
No 274
>PRK09271 flavodoxin; Provisional
Probab=39.09 E-value=58 Score=29.37 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=28.4
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
|||+|+....-|-....|..|++.|.+. |+++.+.+.
T Consensus 1 mkv~IvY~S~tGnTe~~A~~ia~~l~~~---g~~v~~~~~ 37 (160)
T PRK09271 1 MRILLAYASLSGNTREVAREIEERCEEA---GHEVDWVET 37 (160)
T ss_pred CeEEEEEEcCCchHHHHHHHHHHHHHhC---CCeeEEEec
Confidence 7888887655367788899999999987 777766543
No 275
>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed
Probab=38.85 E-value=2.4e+02 Score=28.29 Aligned_cols=20 Identities=20% Similarity=0.426 Sum_probs=16.5
Q ss_pred HHHHHHHHhhCCCEEEEcCc
Q 036427 236 REVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~ 255 (536)
..+.+++++++||+|++.+.
T Consensus 155 ~~~~~~l~~~~~Dlivlagy 174 (286)
T PRK06027 155 ARLLELIDEYQPDLVVLARY 174 (286)
T ss_pred HHHHHHHHHhCCCEEEEecc
Confidence 36678899999999998764
No 276
>PRK09739 hypothetical protein; Provisional
Probab=38.64 E-value=67 Score=30.09 Aligned_cols=42 Identities=24% Similarity=0.257 Sum_probs=27.8
Q ss_pred CCCceEEEEeCC-CCch-HHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 142 DQPKKVLILMSD-TGGG-HRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 142 ~~~mKIL~~~~~-~GgG-h~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|.|||||++.+. ..+| ....+..+++.+.+. +++|.+.|+..
T Consensus 1 ~~mmkiliI~~sp~~~s~s~~l~~~~~~~~~~~---g~~v~~~dL~~ 44 (199)
T PRK09739 1 MQSMRIYLVWAHPRHDSLTAKVAEAIHQRAQER---GHQVEELDLYR 44 (199)
T ss_pred CCCceEEEEEcCCCCCCcHHHHHHHHHHHHHHC---CCEEEEEEhhh
Confidence 357899998654 2223 344455677777777 67888888754
No 277
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=38.32 E-value=2.3e+02 Score=25.54 Aligned_cols=32 Identities=31% Similarity=0.326 Sum_probs=19.4
Q ss_pred hcCeEEECCC---hHHHHHHHHhCCcEEEeccCCc
Q 036427 426 ACDCIITKAG---PGTIAEAMIRGLPIILNDFIAG 457 (536)
Q Consensus 426 ~aDv~V~~sG---~~tllEAma~GlPVI~~~~~~~ 457 (536)
.++++|.-+| .+.-.=|...-+|||..|...+
T Consensus 55 ~~~viIa~AG~~a~Lpgvva~~t~~PVIgvP~~~~ 89 (150)
T PF00731_consen 55 GADVIIAVAGMSAALPGVVASLTTLPVIGVPVSSG 89 (150)
T ss_dssp TESEEEEEEESS--HHHHHHHHSSS-EEEEEE-ST
T ss_pred CCEEEEEECCCcccchhhheeccCCCEEEeecCcc
Confidence 4678887764 2222236666899999997654
No 278
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=38.25 E-value=1.6e+02 Score=30.75 Aligned_cols=35 Identities=14% Similarity=0.246 Sum_probs=23.6
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
++|||+|+.++. ....++.++++. |++|++++...
T Consensus 11 ~~~~ilIiG~g~------~~~~~~~a~~~~---G~~v~~~~~~~ 45 (395)
T PRK09288 11 SATRVMLLGSGE------LGKEVAIEAQRL---GVEVIAVDRYA 45 (395)
T ss_pred CCCEEEEECCCH------HHHHHHHHHHHC---CCEEEEEeCCC
Confidence 567899874432 334456677787 88998887643
No 279
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=37.85 E-value=68 Score=29.98 Aligned_cols=38 Identities=26% Similarity=0.433 Sum_probs=29.8
Q ss_pred ceEEEEe-CCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 145 KKVLILM-SDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 145 mKIL~~~-~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
+|++.++ ..-|-|-...+..||.+|.+. |..|.++|..
T Consensus 17 ~kvI~v~s~kgG~GKTt~a~~LA~~la~~---G~rVllID~D 55 (204)
T TIGR01007 17 IKVLLITSVKPGEGKSTTSANIAVAFAQA---GYKTLLIDGD 55 (204)
T ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHhC---CCeEEEEeCC
Confidence 5655555 445568899999999999998 8899999864
No 280
>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit. This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.
Probab=37.80 E-value=81 Score=33.75 Aligned_cols=33 Identities=21% Similarity=0.069 Sum_probs=24.3
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
++|||++..+ . .+..+++++++. |+++++++..
T Consensus 2 ~kkili~g~g----~--~~~~~~~aa~~l---G~~vv~~~~~ 34 (449)
T TIGR00514 2 LDKILIANRG----E--IALRILRACKEL---GIKTVAVHST 34 (449)
T ss_pred cceEEEeCCC----H--HHHHHHHHHHHc---CCeEEEEECh
Confidence 6789998433 2 366788999998 8899888653
No 281
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=37.78 E-value=3.8e+02 Score=25.75 Aligned_cols=58 Identities=17% Similarity=0.179 Sum_probs=33.0
Q ss_pred hcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCc----eeecCCHHHHHHHHHHHhC
Q 036427 426 ACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGC----GKFSKSPKEIANMVSQWFG 490 (536)
Q Consensus 426 ~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~----g~~~~d~~~La~~I~~ll~ 490 (536)
.|+++.+|+|+ +++=.-.-.|+|.-+-++ .+..+...|. |+-.++..+|+-+++-=++
T Consensus 167 gshlv~Vppg~--~L~d~l~ssPii~ge~g~-----a~~~~~a~g~~f~fgvdp~~DPELAlALRlSME 228 (259)
T KOG2884|consen 167 GSHLVSVPPGP--LLSDALLSSPIIQGEDGG-----AAAGLGANGMDFEFGVDPEDDPELALALRLSME 228 (259)
T ss_pred CceEEEeCCCc--cHHHHhhcCceeccCccc-----ccccccccccccccCCCcccCHHHHHHHHhhHH
Confidence 46688888887 556666778988865321 1111111211 2222355678888876665
No 282
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=37.53 E-value=18 Score=38.11 Aligned_cols=38 Identities=21% Similarity=0.279 Sum_probs=34.2
Q ss_pred hHHHHHhhcCeEEECC----ChHHHHHHHHhCCcEEEeccCC
Q 036427 419 KMEEAMGACDCIITKA----GPGTIAEAMIRGLPIILNDFIA 456 (536)
Q Consensus 419 ~l~~ll~~aDv~V~~s----G~~tllEAma~GlPVI~~~~~~ 456 (536)
|.+++.+.|.+.|.|| .|.|..|.--+|+|.|.++..+
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSG 534 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSG 534 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEeccccccccccc
Confidence 7899999999999999 3689999999999999999754
No 283
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=37.25 E-value=84 Score=30.94 Aligned_cols=52 Identities=25% Similarity=0.274 Sum_probs=38.7
Q ss_pred hhcCeEEECCChHHHHHHHH-hCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 425 GACDCIITKAGPGTIAEAMI-RGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 425 ~~aDv~V~~sG~~tllEAma-~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
..+|++|+-+|-+|++.|.. +++|++.++.+ ..|++.+ +++++.+.++++++
T Consensus 40 ~~~d~vi~iGGDGT~L~a~~~~~~Pilgin~G--------------~lGfl~~~~~~~~~~~l~~~~~ 93 (256)
T PRK14075 40 VTADLIIVVGGDGTVLKAAKKVGTPLVGFKAG--------------RLGFLSSYTLEEIDRFLEDLKN 93 (256)
T ss_pred CCCCEEEEECCcHHHHHHHHHcCCCEEEEeCC--------------CCccccccCHHHHHHHHHHHHc
Confidence 36799999888777877655 58999987732 2455554 78888888888877
No 284
>PRK13011 formyltetrahydrofolate deformylase; Reviewed
Probab=36.58 E-value=2e+02 Score=28.85 Aligned_cols=20 Identities=5% Similarity=0.104 Sum_probs=16.3
Q ss_pred HHHHHHHHhhCCCEEEEcCc
Q 036427 236 REVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~ 255 (536)
..+.+++++++||+|++.+.
T Consensus 155 ~~~~~~l~~~~~Dlivlagy 174 (286)
T PRK13011 155 AQVLDVVEESGAELVVLARY 174 (286)
T ss_pred HHHHHHHHHhCcCEEEEeCh
Confidence 35678899999999998764
No 285
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=36.33 E-value=65 Score=30.19 Aligned_cols=20 Identities=10% Similarity=0.174 Sum_probs=16.4
Q ss_pred HHHHHHHHhhCCCEEEEcCc
Q 036427 236 REVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~ 255 (536)
..+.+++++.+||++++.+.
T Consensus 69 ~~~~~~l~~~~~D~iv~~~~ 88 (190)
T TIGR00639 69 QAIIEELRAHEVDLVVLAGF 88 (190)
T ss_pred HHHHHHHHhcCCCEEEEeCc
Confidence 36678899999999998764
No 286
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=36.03 E-value=91 Score=31.36 Aligned_cols=52 Identities=15% Similarity=0.231 Sum_probs=40.1
Q ss_pred hhcCeEEECCChHHHHHHHH----hCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 425 GACDCIITKAGPGTIAEAMI----RGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 425 ~~aDv~V~~sG~~tllEAma----~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
..+|++|+-+|-+|+++|.. .++|++.++.+ ..|++.+ +++++.+.|+++++
T Consensus 62 ~~~d~vi~~GGDGt~l~~~~~~~~~~~pilGIn~G--------------~lGFL~~~~~~~~~~~l~~~~~ 118 (291)
T PRK02155 62 ARADLAVVLGGDGTMLGIGRQLAPYGVPLIGINHG--------------RLGFITDIPLDDMQETLPPMLA 118 (291)
T ss_pred cCCCEEEEECCcHHHHHHHHHhcCCCCCEEEEcCC--------------CccccccCCHHHHHHHHHHHHc
Confidence 46899999998888998765 37899987732 2355555 78899999999987
No 287
>PLN02285 methionyl-tRNA formyltransferase
Probab=35.80 E-value=3.1e+02 Score=28.16 Aligned_cols=18 Identities=28% Similarity=0.505 Sum_probs=13.9
Q ss_pred HHHHHHHhhCCCEEEEcC
Q 036427 237 EVAKGLMKYQPDIIISVH 254 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~ 254 (536)
.+.+.+++++||++++.+
T Consensus 84 ~~~~~l~~~~~Dliv~~~ 101 (334)
T PLN02285 84 DFLSALRELQPDLCITAA 101 (334)
T ss_pred HHHHHHHhhCCCEEEhhH
Confidence 344568899999999865
No 288
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit. In several thermophilic species (Methanobacterium thermoautotrophicum, Methanococcus jannaschii, Aquifex aeolicus), the large subunit appears split, at different points, into two separate genes.
Probab=35.75 E-value=74 Score=38.20 Aligned_cols=42 Identities=26% Similarity=0.299 Sum_probs=31.1
Q ss_pred CCCceEEEEeCC---CCchH--HHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 142 DQPKKVLILMSD---TGGGH--RASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 142 ~~~mKIL~~~~~---~GgGh--~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
...+||+++.+| +|-|. ...+..++++|++. |+++++++...
T Consensus 552 ~~~~kvlvlG~G~~rig~~~efd~~~v~~i~al~~~---G~~vI~v~~np 598 (1050)
T TIGR01369 552 TDKKKVLVLGSGPNRIGQGVEFDYCCVHAVLALREL---GYETIMINYNP 598 (1050)
T ss_pred CCCceEEEecCcccccccccccchHHHHHHHHHHhC---CCEEEEEecCC
Confidence 345799999766 33333 45678889999999 89999887643
No 289
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=35.44 E-value=5.2e+02 Score=27.52 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=24.8
Q ss_pred EEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 147 VLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 147 IL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
+.++.++-|=|-.+-.+.++..|.++ + .|+.++.
T Consensus 95 ~iLIgGdPGIGKSTLLLQva~~lA~~---~-~vLYVsG 128 (456)
T COG1066 95 VILIGGDPGIGKSTLLLQVAARLAKR---G-KVLYVSG 128 (456)
T ss_pred EEEEccCCCCCHHHHHHHHHHHHHhc---C-cEEEEeC
Confidence 44445555569999999999999988 6 6655554
No 290
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=35.27 E-value=32 Score=34.23 Aligned_cols=37 Identities=22% Similarity=0.396 Sum_probs=30.2
Q ss_pred hHHHHHhhcCeEEECCC----hHHHHHHHHhC-CcEEEeccC
Q 036427 419 KMEEAMGACDCIITKAG----PGTIAEAMIRG-LPIILNDFI 455 (536)
Q Consensus 419 ~l~~ll~~aDv~V~~sG----~~tllEAma~G-lPVI~~~~~ 455 (536)
+..+.|+.|...++|.| ..-+.|||++| +|||+.+..
T Consensus 229 ~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~ 270 (302)
T PF03016_consen 229 EYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDY 270 (302)
T ss_pred HHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcc
Confidence 46788999999888875 36789999999 689987643
No 291
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=35.06 E-value=2e+02 Score=26.67 Aligned_cols=97 Identities=20% Similarity=0.215 Sum_probs=41.5
Q ss_pred CEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcC-CCCCCEEEecC--hhhHHHHHhhc
Q 036427 351 PAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGF--VSKMEEAMGAC 427 (536)
Q Consensus 351 ~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~-~~~~~V~~~G~--v~~l~~ll~~a 427 (536)
+.|-+.+.+.|. ...+..+++.+.+ ..|+.++++-+....- .+..++. .....+.+.++ ...+..++..-
T Consensus 22 ~~iWiHa~SvGE---~~a~~~Li~~l~~---~~p~~~illT~~T~tg-~~~~~~~~~~~v~~~~~P~D~~~~~~rfl~~~ 94 (186)
T PF04413_consen 22 PLIWIHAASVGE---VNAARPLIKRLRK---QRPDLRILLTTTTPTG-REMARKLLPDRVDVQYLPLDFPWAVRRFLDHW 94 (186)
T ss_dssp T-EEEE-SSHHH---HHHHHHHHHHHTT------TS-EEEEES-CCH-HHHHHGG-GGG-SEEE---SSHHHHHHHHHHH
T ss_pred CcEEEEECCHHH---HHHHHHHHHHHHH---hCCCCeEEEEecCCch-HHHHHHhCCCCeEEEEeCccCHHHHHHHHHHh
Confidence 556566555441 2344555555542 3578877666553321 1222221 11223555443 12445555543
Q ss_pred --CeEEEC-C--ChHHHHHHHHhCCcEEEecc
Q 036427 428 --DCIITK-A--GPGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 428 --Dv~V~~-s--G~~tllEAma~GlPVI~~~~ 454 (536)
|++|.- + -|+-+.++-..|+|++.++.
T Consensus 95 ~P~~~i~~EtElWPnll~~a~~~~ip~~LvNa 126 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLREAKRRGIPVVLVNA 126 (186)
T ss_dssp --SEEEEES----HHHHHH-----S-EEEEEE
T ss_pred CCCEEEEEccccCHHHHHHHhhcCCCEEEEee
Confidence 665554 4 28889999999999999884
No 292
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=34.76 E-value=82 Score=31.71 Aligned_cols=55 Identities=20% Similarity=0.195 Sum_probs=40.7
Q ss_pred HHHhhcCeEEECCChHHHHHHHH----hCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 422 EAMGACDCIITKAGPGTIAEAMI----RGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 422 ~ll~~aDv~V~~sG~~tllEAma----~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
++-..+|++|+-+|-+|++.|+. .++|++.++.+ + .|++.+ +++++.++++++++
T Consensus 59 ~~~~~~d~vi~lGGDGT~L~aa~~~~~~~~Pilgin~G------~--------lGFl~~~~~~~~~~~l~~i~~ 118 (292)
T PRK03378 59 EIGQQADLAIVVGGDGNMLGAARVLARYDIKVIGINRG------N--------LGFLTDLDPDNALQQLSDVLE 118 (292)
T ss_pred hcCCCCCEEEEECCcHHHHHHHHHhcCCCCeEEEEECC------C--------CCcccccCHHHHHHHHHHHHc
Confidence 33446899999988888988874 36899987732 1 345444 68889999999987
No 293
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=34.74 E-value=96 Score=30.88 Aligned_cols=55 Identities=16% Similarity=0.178 Sum_probs=39.6
Q ss_pred HHHhhcCeEEECCChHHHHHHHH----hCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 422 EAMGACDCIITKAGPGTIAEAMI----RGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 422 ~ll~~aDv~V~~sG~~tllEAma----~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
++-..+|++|+-+|-+|++.|+. .++|++.++.+ ..|++.+ +++++.+.+..+++
T Consensus 38 ~~~~~~d~vi~iGGDGT~L~aa~~~~~~~~PilgIn~G--------------~lGFL~~~~~~~~~~~l~~~~~ 97 (272)
T PRK02231 38 EIGQRAQLAIVIGGDGNMLGRARVLAKYDIPLIGINRG--------------NLGFLTDIDPKNAYEQLEACLE 97 (272)
T ss_pred HhCcCCCEEEEECCcHHHHHHHHHhccCCCcEEEEeCC--------------CCcccccCCHHHHHHHHHHHHh
Confidence 44446899999988888887644 36899987732 2455554 78888888888776
No 294
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=34.72 E-value=51 Score=28.51 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=23.5
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
|||++.++|- .+... +..+.+.|++. |++|.++
T Consensus 1 k~i~l~vtGs-~~~~~-~~~~l~~L~~~---g~~v~vv 33 (129)
T PF02441_consen 1 KRILLGVTGS-IAAYK-APDLLRRLKRA---GWEVRVV 33 (129)
T ss_dssp -EEEEEE-SS-GGGGG-HHHHHHHHHTT---TSEEEEE
T ss_pred CEEEEEEECH-HHHHH-HHHHHHHHhhC---CCEEEEE
Confidence 7899988775 34444 88899999998 6777554
No 295
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=34.69 E-value=93 Score=30.97 Aligned_cols=51 Identities=25% Similarity=0.371 Sum_probs=39.5
Q ss_pred hcCeEEECCChHHHHHHHH-hCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 426 ACDCIITKAGPGTIAEAMI-RGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 426 ~aDv~V~~sG~~tllEAma-~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
.+|++|+-+|-+|++-|+. +..|++.++.+ ..|++.+ +++++.++++++++
T Consensus 52 ~~D~vi~lGGDGT~L~a~~~~~~PilGIN~G--------------~lGFL~~~~~~~~~~~l~~i~~ 104 (271)
T PRK01185 52 NADVIITIGGDGTILRTLQRAKGPILGINMG--------------GLGFLTEIEIDEVGSAIKKLIR 104 (271)
T ss_pred CCCEEEEEcCcHHHHHHHHHcCCCEEEEECC--------------CCccCcccCHHHHHHHHHHHHc
Confidence 6899999988788888776 46799887632 2355554 78999999999988
No 296
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=34.38 E-value=4.1e+02 Score=27.52 Aligned_cols=65 Identities=22% Similarity=0.344 Sum_probs=37.4
Q ss_pred EEEEecCCHHHHHHHHcCCCCCCEEEe--cCh--hhHHHHHhhcCeEEECCCh---HHHH-HHHHhCCcEEEe
Q 036427 388 VLVICGRNKKLANKLLSTDWKIPVQVK--GFV--SKMEEAMGACDCIITKAGP---GTIA-EAMIRGLPIILN 452 (536)
Q Consensus 388 ~lvi~G~~~~l~~~l~~~~~~~~V~~~--G~v--~~l~~ll~~aDv~V~~sG~---~tll-EAma~GlPVI~~ 452 (536)
-++++|...+-.+.+.+.-...++... +.. +++.++++.+|++|..+|+ ..++ -++..|++.|-+
T Consensus 25 ~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 25 EVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFGEPVARACIEAGVHYVDT 97 (386)
T ss_dssp EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGHHHHHHHHHHHT-EEEES
T ss_pred cEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccchhHHHHHHHHHhCCCeecc
Confidence 356778876433333321122234432 222 3688999999999987753 3344 478889998873
No 297
>TIGR03837 efp_adjacent_2 conserved hypothetical protein, PP_1857 family. This model describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=34.37 E-value=3.9e+02 Score=27.82 Aligned_cols=44 Identities=23% Similarity=0.403 Sum_probs=36.5
Q ss_pred CEEEecCh--hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEecc
Q 036427 410 PVQVKGFV--SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 410 ~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~ 454 (536)
.+++++++ ++.++++-.||+=++.+ -=+++-|.-+|+|.|=--+
T Consensus 243 ~~~~LPf~~Q~~yD~LLW~cD~NfVRG-EDSFVRAqWAgkPfvWhIY 288 (371)
T TIGR03837 243 TVAVLPFVPQDDYDRLLWACDLNFVRG-EDSFVRAQWAGKPFVWHIY 288 (371)
T ss_pred EEEEcCCCChhhHHHHHHhChhcEeec-hhHHHHHHHcCCCceeecc
Confidence 57888888 58999999999988874 3577899999999997544
No 298
>PLN02778 3,5-epimerase/4-reductase
Probab=34.27 E-value=97 Score=31.04 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=20.2
Q ss_pred CCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEE
Q 036427 140 ENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFV 181 (536)
Q Consensus 140 ~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v 181 (536)
.+.+.||||++. +.| .-...|++.|.++ |++|.+
T Consensus 5 ~~~~~~kiLVtG-~tG----fiG~~l~~~L~~~---g~~V~~ 38 (298)
T PLN02778 5 AGSATLKFLIYG-KTG----WIGGLLGKLCQEQ---GIDFHY 38 (298)
T ss_pred CCCCCCeEEEEC-CCC----HHHHHHHHHHHhC---CCEEEE
Confidence 344557888664 221 3334467778887 677754
No 299
>PF02302 PTS_IIB: PTS system, Lactose/Cellobiose specific IIB subunit; InterPro: IPR003501 The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The lactose/cellobiose-specific family are one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes. The fold of IIB cellobiose shows similar structure to mammalian tyrosine phosphatases. This signature is often found downstream of IPR003352 from INTERPRO.; GO: 0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity, 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system; PDB: 1TVM_A 2WY2_D 1IIB_A 2WWV_D 1H9C_A 1E2B_A 2L2Q_A 2KYR_A 3CZC_A 3NBM_A ....
Probab=33.88 E-value=1.7e+02 Score=23.10 Aligned_cols=64 Identities=20% Similarity=0.309 Sum_probs=36.3
Q ss_pred EEEEecCCH--------HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCC-hHHHHHHHHhCCcEEEec
Q 036427 388 VLVICGRNK--------KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAG-PGTIAEAMIRGLPIILND 453 (536)
Q Consensus 388 ~lvi~G~~~--------~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG-~~tllEAma~GlPVI~~~ 453 (536)
++++||.|- .+++.+++.++...+.... ..+.......+|++++..- .. --+.-..++|+..++
T Consensus 2 IlvvC~~Gi~TS~~~~~~i~~~~~~~gi~~~~~~~~-~~~~~~~~~~~D~il~~~~i~~-~~~~~~~~~pv~~I~ 74 (90)
T PF02302_consen 2 ILVVCGSGIGTSLMVANKIKKALKELGIEVEVSAGS-ILEVEEIADDADLILLTPQIAY-EDLKEFAGKPVPVIP 74 (90)
T ss_dssp EEEEESSSSHHHHHHHHHHHHHHHHTTECEEEEEEE-TTTHHHHHTT-SEEEEEESSGG-HHHHHHTTSBEEEEE
T ss_pred EEEECCChHHHHHHHHHHHHHHHHhccCceEEEEec-ccccccccCCCcEEEEcCccch-hhhhhhcCCeEEEEE
Confidence 567777762 3445555555433333333 3456677778999998763 32 223455667876665
No 300
>PRK03767 NAD(P)H:quinone oxidoreductase; Provisional
Probab=33.72 E-value=86 Score=29.42 Aligned_cols=37 Identities=30% Similarity=0.345 Sum_probs=26.6
Q ss_pred CceEEEEeCCCCchHHHH-HHHHHHHHHh-ccCCceEEEEeec
Q 036427 144 PKKVLILMSDTGGGHRAS-AEAIKAAFHE-KFGNEYQVFVTDL 184 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~-~l~La~~L~~-~~g~g~eV~v~~~ 184 (536)
||||+++..+. .||... +..+++.+.+ . |++|.+.+.
T Consensus 1 M~kilIvy~S~-~G~T~~lA~~ia~g~~~~~---G~ev~~~~l 39 (200)
T PRK03767 1 MAKVLVLYYSM-YGHIETMAEAVAEGAREVA---GAEVTIKRV 39 (200)
T ss_pred CCeEEEEEcCC-CCHHHHHHHHHHHHHhhcC---CcEEEEEec
Confidence 46999998776 465554 6667777776 5 788887775
No 301
>COG0394 Wzb Protein-tyrosine-phosphatase [Signal transduction mechanisms]
Probab=33.69 E-value=51 Score=29.19 Aligned_cols=28 Identities=21% Similarity=0.133 Sum_probs=18.5
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHh
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHE 171 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~ 171 (536)
++|||||+|.+. ..-.-.|..|++.+..
T Consensus 1 ~~~kVLFVC~gN-~cRSpmAE~l~~~~~~ 28 (139)
T COG0394 1 MMMKVLFVCTGN-ICRSPMAEALLRHLAP 28 (139)
T ss_pred CCceEEEEcCCC-cccCHHHHHHHHHhcc
Confidence 468999999774 3555555556555544
No 302
>COG0489 Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=33.48 E-value=2.8e+02 Score=27.43 Aligned_cols=39 Identities=26% Similarity=0.266 Sum_probs=30.1
Q ss_pred CceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
.+++..++++ -|=|-...+..||.+|.+. |..|.+.|..
T Consensus 56 ~~~~I~V~S~kgGvGKStva~nLA~alA~~---G~rVlliDaD 95 (265)
T COG0489 56 VKNVIAVTSGKGGVGKSTVAVNLAAALAQL---GKRVLLLDAD 95 (265)
T ss_pred cceEEEEEeCCCCCcHHHHHHHHHHHHHhc---CCcEEEEeCc
Confidence 4565555554 4458899999999999999 8999998753
No 303
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=33.16 E-value=4.2e+02 Score=24.97 Aligned_cols=100 Identities=12% Similarity=0.044 Sum_probs=51.6
Q ss_pred CcEEEEEecCC-HHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCC-h----HHHHHHHHhCCcEEEeccCCcc
Q 036427 385 IGQVLVICGRN-KKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAG-P----GTIAEAMIRGLPIILNDFIAGQ 458 (536)
Q Consensus 385 ~~~~lvi~G~~-~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG-~----~tllEAma~GlPVI~~~~~~~~ 458 (536)
+.++.++...- +++.+. .+. .+|.+...--+ ...+..+|++|..++ + ....+|-..|+||-+.+.+..-
T Consensus 32 ga~VtVvsp~~~~~l~~l-~~~---~~i~~~~~~~~-~~dl~~~~lVi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~ 106 (205)
T TIGR01470 32 GAQLRVIAEELESELTLL-AEQ---GGITWLARCFD-ADILEGAFLVIAATDDEELNRRVAHAARARGVPVNVVDDPELC 106 (205)
T ss_pred CCEEEEEcCCCCHHHHHH-HHc---CCEEEEeCCCC-HHHhCCcEEEEECCCCHHHHHHHHHHHHHcCCEEEECCCcccC
Confidence 44555554432 233333 222 25666443222 455788999888876 3 2444566789999777654322
Q ss_pred ccCChhhHhhCC-ceeecC----C---HHHHHHHHHHHhC
Q 036427 459 EAGNVPYVVENG-CGKFSK----S---PKEIANMVSQWFG 490 (536)
Q Consensus 459 e~~na~~lv~~g-~g~~~~----d---~~~La~~I~~ll~ 490 (536)
.. ....+++.| ..+.+. + ...+.+.|+.++.
T Consensus 107 ~f-~~pa~~~~g~l~iaisT~G~sP~la~~lr~~ie~~l~ 145 (205)
T TIGR01470 107 SF-IFPSIVDRSPVVVAISSGGAAPVLARLLRERIETLLP 145 (205)
T ss_pred eE-EEeeEEEcCCEEEEEECCCCCcHHHHHHHHHHHHhcc
Confidence 22 122234333 333232 2 3456666666664
No 304
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=32.74 E-value=3.7e+02 Score=25.19 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=26.9
Q ss_pred hhHHHHHhhcCeEEECCC-h-------------HHHHHHHHhCCcEEEecc
Q 036427 418 SKMEEAMGACDCIITKAG-P-------------GTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~~sG-~-------------~tllEAma~GlPVI~~~~ 454 (536)
+++.+.+..||++++++| . -.+.+....|+|++.+-.
T Consensus 72 ~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~~~~~i~~~~~~G~v~~G~SA 122 (210)
T cd03129 72 PDVVARLLEADGIFVGGGNQLRLLSVLRETPLLDAILKRVARGVVIGGTSA 122 (210)
T ss_pred HHHHHHHhhCCEEEEcCCcHHHHHHHHHhCChHHHHHHHHHcCCeEEEcCH
Confidence 577889999999999875 1 134566667888887554
No 305
>PRK07206 hypothetical protein; Provisional
Probab=32.58 E-value=2e+02 Score=30.12 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=22.5
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
||+|++++-++. . ...+++++++. |+++++++..
T Consensus 1 ~~k~~liv~~~~-~-----~~~~~~a~~~~---G~~~v~v~~~ 34 (416)
T PRK07206 1 MMKKVVIVDPFS-S-----GKFLAPAFKKR---GIEPIAVTSS 34 (416)
T ss_pred CCCeEEEEcCCc-h-----HHHHHHHHHHc---CCeEEEEEcC
Confidence 345677766543 2 23578899988 8888777654
No 306
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=32.23 E-value=1.2e+02 Score=30.02 Aligned_cols=53 Identities=13% Similarity=0.169 Sum_probs=39.4
Q ss_pred hhcCeEEECCChHHHHHHHHh-----CCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 425 GACDCIITKAGPGTIAEAMIR-----GLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 425 ~~aDv~V~~sG~~tllEAma~-----GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
..+|++|+-+|-+|++.|+.. .+|++.++.+ ...|++.+ +++++.+.+.++++
T Consensus 38 ~~~D~vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~-------------G~lGFL~~~~~~~~~~~l~~i~~ 96 (264)
T PRK03501 38 KNANIIVSIGGDGTFLQAVRKTGFREDCLYAGISTK-------------DQLGFYCDFHIDDLDKMIQAITK 96 (264)
T ss_pred CCccEEEEECCcHHHHHHHHHhcccCCCeEEeEecC-------------CCCeEcccCCHHHHHHHHHHHHc
Confidence 457999998888899998864 5687776631 12455554 78899999999887
No 307
>PRK08462 biotin carboxylase; Validated
Probab=32.13 E-value=1.4e+02 Score=31.83 Aligned_cols=33 Identities=15% Similarity=0.060 Sum_probs=24.6
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.++|||++..+. .+..+++++++. |++++++..
T Consensus 3 ~~k~ili~~~g~------~~~~~~~~~~~~---G~~~v~~~~ 35 (445)
T PRK08462 3 EIKRILIANRGE------IALRAIRTIQEM---GKEAIAIYS 35 (445)
T ss_pred CCCEEEEECCcH------HHHHHHHHHHHc---CCCEEEEec
Confidence 367999987664 266788999998 888877643
No 308
>TIGR01319 glmL_fam conserved hypothetical protein. This small family includes, so far, an uncharacterized protein from E. coli O157:H7 and GlmL from Clostridium tetanomorphum and Clostridium cochlearium. GlmL is located between the genes for the two subunits, epsilon (GlmE) and sigma (GlmS), of the coenzyme-B12-dependent glutamate mutase (methylaspartate mutase), the first enzyme in a pathway of glutamate fermentation. Members shows significant sequence similarity to the hydantoinase branch of the hydantoinase/oxoprolinase family (pfam01968).
Probab=31.72 E-value=6.8e+02 Score=26.96 Aligned_cols=37 Identities=19% Similarity=0.122 Sum_probs=24.5
Q ss_pred HHHHHhhcCeEEECC-C-hHHHHHHHHhCC-------cEEEeccCC
Q 036427 420 MEEAMGACDCIITKA-G-PGTIAEAMIRGL-------PIILNDFIA 456 (536)
Q Consensus 420 l~~ll~~aDv~V~~s-G-~~tllEAma~Gl-------PVI~~~~~~ 456 (536)
+..+...++..++|+ + -+...|.++-|. ++++.|.++
T Consensus 213 l~~i~~~~~~~i~PTP~AV~~a~~~la~~~~~~~g~g~ll~VDIGG 258 (463)
T TIGR01319 213 LDNAEDFIGEELMPTPAAVFEAAKAIAEGTDKDDGIGDFILIDIGG 258 (463)
T ss_pred HHHHHHHhCCcccCCHHHHHHHHHHHHhccccccCcCCEEEEEcCc
Confidence 344445566666665 3 456677888875 689999875
No 309
>PRK13886 conjugal transfer protein TraL; Provisional
Probab=31.67 E-value=93 Score=30.37 Aligned_cols=40 Identities=18% Similarity=0.135 Sum_probs=31.0
Q ss_pred CceEEEEeCCC-CchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 144 PKKVLILMSDT-GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 144 ~mKIL~~~~~~-GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|+||.+++.+- |-|-...+..||.++.++ |..|.++|...
T Consensus 1 m~~i~~i~~~KGGvGKSt~a~~la~~l~~~---g~~vl~iD~D~ 41 (241)
T PRK13886 1 MAKIHMVLQGKGGVGKSFIAATIAQYKASK---GQKPLCIDTDP 41 (241)
T ss_pred CCeEEEEecCCCCCcHHHHHHHHHHHHHhC---CCCEEEEECCC
Confidence 46777777554 458888899999999988 77898887643
No 310
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=31.03 E-value=1.3e+02 Score=26.35 Aligned_cols=39 Identities=31% Similarity=0.349 Sum_probs=25.5
Q ss_pred ceEEEEeCCC--CchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KKVLILMSDT--GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~~~~--GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|||+++.++. .|-....+..+++.+.+. ++++.++++..
T Consensus 1 Mkilii~gS~r~~~~t~~l~~~~~~~l~~~---g~e~~~i~l~~ 41 (152)
T PF03358_consen 1 MKILIINGSPRKNSNTRKLAEAVAEQLEEA---GAEVEVIDLAD 41 (152)
T ss_dssp -EEEEEESSSSTTSHHHHHHHHHHHHHHHT---TEEEEEEECTT
T ss_pred CEEEEEECcCCCCCHHHHHHHHHHHHHHHc---CCEEEEEeccc
Confidence 8999997653 234444555666666666 78998887643
No 311
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.63 E-value=2.7e+02 Score=29.34 Aligned_cols=39 Identities=15% Similarity=0.339 Sum_probs=30.1
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEee
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTD 183 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~ 183 (536)
.....|.++.+--|+|-.+.|.-||..++++ |+.+.++.
T Consensus 98 K~kpsVimfVGLqG~GKTTtc~KlA~y~kkk---G~K~~Lvc 136 (483)
T KOG0780|consen 98 KGKPSVIMFVGLQGSGKTTTCTKLAYYYKKK---GYKVALVC 136 (483)
T ss_pred cCCCcEEEEEeccCCCcceeHHHHHHHHHhc---CCceeEEe
Confidence 3334566666666789999999999999999 88886553
No 312
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=30.51 E-value=84 Score=31.54 Aligned_cols=38 Identities=16% Similarity=0.143 Sum_probs=30.2
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|||.|.. .-|=|-...+..||.+|.+. |..|+++|...
T Consensus 1 m~ia~~g-KGGVGKTTta~nLA~~La~~---G~rVLlID~Dp 38 (290)
T CHL00072 1 MKLAVYG-KGGIGKSTTSCNISIALARR---GKKVLQIGCDP 38 (290)
T ss_pred CeEEEEC-CCCCcHHHHHHHHHHHHHHC---CCeEEEEeccC
Confidence 6776665 22338889999999999998 88999998754
No 313
>PRK05568 flavodoxin; Provisional
Probab=30.30 E-value=1.2e+02 Score=26.40 Aligned_cols=37 Identities=30% Similarity=0.324 Sum_probs=27.5
Q ss_pred CceEEEEe-CCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 144 PKKVLILM-SDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 144 ~mKIL~~~-~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
|+||+++- +.+ |-....+..+++.+.+. |++|.+.+.
T Consensus 1 m~~~~IvY~S~~-GnT~~~a~~i~~~~~~~---g~~v~~~~~ 38 (142)
T PRK05568 1 MKKINIIYWSGT-GNTEAMANLIAEGAKEN---GAEVKLLNV 38 (142)
T ss_pred CCeEEEEEECCC-chHHHHHHHHHHHHHHC---CCeEEEEEC
Confidence 35777765 445 67888888999999876 778877765
No 314
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=30.11 E-value=1e+02 Score=29.06 Aligned_cols=36 Identities=6% Similarity=-0.034 Sum_probs=25.5
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
..+||++-++|- .|....+..+++.|.+. |++|.++
T Consensus 4 ~~k~IllgVTGs-iaa~k~a~~lir~L~k~---G~~V~vv 39 (196)
T PRK08305 4 KGKRIGFGLTGS-HCTYDEVMPEIEKLVDE---GAEVTPI 39 (196)
T ss_pred CCCEEEEEEcCH-HHHHHHHHHHHHHHHhC---cCEEEEE
Confidence 457898887763 34444468899999988 6677544
No 315
>PRK09620 hypothetical protein; Provisional
Probab=30.08 E-value=1.3e+02 Score=29.03 Aligned_cols=22 Identities=14% Similarity=0.031 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHhccCCceEEEEeec
Q 036427 160 ASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 160 ~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.....||++|.++ |++|++++.
T Consensus 30 fiGs~LA~~L~~~---Ga~V~li~g 51 (229)
T PRK09620 30 TIGRIIAEELISK---GAHVIYLHG 51 (229)
T ss_pred HHHHHHHHHHHHC---CCeEEEEeC
Confidence 4556779999998 889988764
No 316
>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.05 E-value=5.9e+02 Score=25.68 Aligned_cols=46 Identities=20% Similarity=0.379 Sum_probs=36.7
Q ss_pred CCEEEecCh--hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccC
Q 036427 409 IPVQVKGFV--SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 409 ~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~ 455 (536)
-++..++|+ ++.++++..||+-++.+ --++.-|.-+|+|.+=--++
T Consensus 238 lrvvklPFvpqddyd~LL~lcD~n~VRG-EDSFVRAq~agkPflWHIYp 285 (370)
T COG4394 238 LRVVKLPFVPQDDYDELLWLCDFNLVRG-EDSFVRAQLAGKPFLWHIYP 285 (370)
T ss_pred eEEEEecCCcHhHHHHHHHhcccceeec-chHHHHHHHcCCCcEEEecC
Confidence 357778887 58999999999988764 45778899999999875544
No 317
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=29.71 E-value=62 Score=28.85 Aligned_cols=39 Identities=23% Similarity=0.356 Sum_probs=33.8
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
+++.||++...+. -||.+.+.-++++|++. |++|+....
T Consensus 10 g~rprvlvak~Gl-DgHd~gakvia~~l~d~---GfeVi~~g~ 48 (143)
T COG2185 10 GARPRVLVAKLGL-DGHDRGAKVIARALADA---GFEVINLGL 48 (143)
T ss_pred CCCceEEEeccCc-cccccchHHHHHHHHhC---CceEEecCC
Confidence 5678999998887 79999999999999998 899877543
No 318
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=29.56 E-value=7e+02 Score=26.40 Aligned_cols=39 Identities=28% Similarity=0.589 Sum_probs=25.5
Q ss_pred hhHHHHHhhcCeEEECCC-hHHH-----HHHHHh---CCcEEEeccCC
Q 036427 418 SKMEEAMGACDCIITKAG-PGTI-----AEAMIR---GLPIILNDFIA 456 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~~sG-~~tl-----lEAma~---GlPVI~~~~~~ 456 (536)
+++.+.+..+|++|..+| +..+ ++.+.. +.|.+++|...
T Consensus 234 ~~~~~~l~~aDvVI~aT~s~~~~i~~~~l~~~~~~~~~~~~vviDla~ 281 (423)
T PRK00045 234 DELPEALAEADIVISSTGAPHPIIGKGMVERALKARRHRPLLLVDLAV 281 (423)
T ss_pred HHHHHHhccCCEEEECCCCCCcEEcHHHHHHHHhhccCCCeEEEEeCC
Confidence 567788899999998875 2222 222221 57899988753
No 319
>COG0223 Fmt Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]
Probab=29.36 E-value=2e+02 Score=29.22 Aligned_cols=18 Identities=33% Similarity=0.565 Sum_probs=14.6
Q ss_pred HHHHHHHhhCCCEEEEcC
Q 036427 237 EVAKGLMKYQPDIIISVH 254 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~ 254 (536)
.+.+.+++.+||++++..
T Consensus 70 e~~~~l~~l~~D~ivvva 87 (307)
T COG0223 70 EFLEELAALDPDLIVVVA 87 (307)
T ss_pred HHHHHHhccCCCEEEEEe
Confidence 466778889999999865
No 320
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=29.34 E-value=3.7e+02 Score=25.17 Aligned_cols=37 Identities=24% Similarity=0.311 Sum_probs=28.6
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.||.++++.+|-|-.+.+.-||..+..+ +..|.+++.
T Consensus 1 p~vi~lvGptGvGKTTt~aKLAa~~~~~---~~~v~lis~ 37 (196)
T PF00448_consen 1 PKVIALVGPTGVGKTTTIAKLAARLKLK---GKKVALISA 37 (196)
T ss_dssp SEEEEEEESTTSSHHHHHHHHHHHHHHT---T--EEEEEE
T ss_pred CEEEEEECCCCCchHhHHHHHHHHHhhc---cccceeecC
Confidence 3678888888889999999999999988 667766554
No 321
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=29.28 E-value=3.1e+02 Score=23.52 Aligned_cols=36 Identities=17% Similarity=0.278 Sum_probs=23.7
Q ss_pred hHHHHHhhcCeEEECC-----------C------hHHHHHHHHhCCcEEEecc
Q 036427 419 KMEEAMGACDCIITKA-----------G------PGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 419 ~l~~ll~~aDv~V~~s-----------G------~~tllEAma~GlPVI~~~~ 454 (536)
+-.++...+|++|..+ | ..++.+++..++|+|+.|.
T Consensus 66 ~~~~~~~~~D~~vVaPaT~NtlaKiA~GiaD~l~~~~~~~~l~~~~pvvi~P~ 118 (129)
T PF02441_consen 66 EHIELSRWADAMVVAPATANTLAKIANGIADNLLTRVALAALKEGKPVVIAPA 118 (129)
T ss_dssp CHHHHHHTESEEEEEEEEHHHHHHHHTT--SSHHHHHHHHHHHTTCGEEEEEE
T ss_pred CcccccccCCEEEEcccCHHHHHHHHhCCcchHHHHHHHHHccCCCCeEEEEe
Confidence 3445577899877652 3 1344455566999999985
No 322
>PRK08105 flavodoxin; Provisional
Probab=29.26 E-value=95 Score=27.72 Aligned_cols=38 Identities=21% Similarity=0.130 Sum_probs=29.2
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
|.||+|+-+...|-....|..|++.|.+. ++++.+.+.
T Consensus 1 m~~i~I~YgS~tGnte~~A~~l~~~l~~~---g~~~~~~~~ 38 (149)
T PRK08105 1 MAKVGIFVGTVYGNALLVAEEAEAILTAQ---GHEVTLFED 38 (149)
T ss_pred CCeEEEEEEcCchHHHHHHHHHHHHHHhC---CCceEEech
Confidence 34788876554478889999999999987 778877654
No 323
>cd01409 SIRT4 SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span.
Probab=29.21 E-value=95 Score=30.66 Aligned_cols=49 Identities=18% Similarity=0.165 Sum_probs=32.1
Q ss_pred CCCEEEecCh------hhHHHHHhhcCeEEECC--C---h--HHHHHHHHhCCcEEEeccCC
Q 036427 408 KIPVQVKGFV------SKMEEAMGACDCIITKA--G---P--GTIAEAMIRGLPIILNDFIA 456 (536)
Q Consensus 408 ~~~V~~~G~v------~~l~~ll~~aDv~V~~s--G---~--~tllEAma~GlPVI~~~~~~ 456 (536)
.++|.+.|.. ....+.+..||++++-+ . | .-+.+|...|.|+|.++...
T Consensus 180 rP~VV~FGE~lp~~~~~~a~~~~~~aDlllviGTSl~V~pa~~l~~~a~~~g~~viiIN~~~ 241 (260)
T cd01409 180 KPDVVFFGENVPRDRVVTAAARLAEADALLVLGSSLMVYSGYRFVLAAAEAGLPIAIVNIGP 241 (260)
T ss_pred CCCEEECCCCCCHHHHHHHHHHHhcCCEEEEeCcCceecchhhHHHHHHHCCCcEEEEcCCC
Confidence 4566666652 24567778899876642 1 2 23345778999999999754
No 324
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=29.15 E-value=1.3e+02 Score=30.45 Aligned_cols=53 Identities=19% Similarity=0.333 Sum_probs=39.5
Q ss_pred HhhcCeEEECCChHHHHHHHH----hCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 424 MGACDCIITKAGPGTIAEAMI----RGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 424 l~~aDv~V~~sG~~tllEAma----~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
-..+|++|+-+|-+|+++++. .++|++.++.+ ..|++.. +++++.++++++++
T Consensus 60 ~~~~d~vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G--------------~lGFl~~~~~~~~~~~l~~~~~ 117 (295)
T PRK01231 60 GEVCDLVIVVGGDGSLLGAARALARHNVPVLGINRG--------------RLGFLTDIRPDELEFKLAEVLD 117 (295)
T ss_pred ccCCCEEEEEeCcHHHHHHHHHhcCCCCCEEEEeCC--------------cccccccCCHHHHHHHHHHHHc
Confidence 346899999888888888764 36799987742 2344444 78999999999987
No 325
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=29.11 E-value=1.2e+02 Score=29.61 Aligned_cols=39 Identities=26% Similarity=0.277 Sum_probs=27.1
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|||+|..=| |.|-...+..|+..|.++ ++++|+++|...
T Consensus 1 mkIaI~GKG-G~GKTtiaalll~~l~~~--~~~~VLvVDaDp 39 (255)
T COG3640 1 MKIAITGKG-GVGKTTIAALLLKRLLSK--GGYNVLVVDADP 39 (255)
T ss_pred CeEEEecCC-CccHHHHHHHHHHHHHhc--CCceEEEEeCCC
Confidence 677776522 237777777767777777 259999998755
No 326
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=28.95 E-value=6.6e+02 Score=25.90 Aligned_cols=94 Identities=14% Similarity=0.037 Sum_probs=49.8
Q ss_pred HHHhhcCeEEEC---CC---hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHH
Q 036427 422 EAMGACDCIITK---AG---PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDE 495 (536)
Q Consensus 422 ~ll~~aDv~V~~---sG---~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~ 495 (536)
.+...+|++|+. ++ |....|.+.--.+-+++|..-.+.. +. +....+..+=|.++|.+.+++-+ ..
T Consensus 222 ~~~~~~DvVIs~t~~Tas~~p~i~~~~~~~~~~r~~iDLAvPRdI---d~-v~~~~~v~Ly~iDdL~~i~~~n~----~~ 293 (338)
T PRK00676 222 SFQDPYDVIFFGSSESAYAFPHLSWESLADIPDRIVFDFNVPRTF---PW-SETPFPHRYLDMDFISEWVQKHL----QC 293 (338)
T ss_pred hcccCCCEEEEcCCcCCCCCceeeHHHHhhccCcEEEEecCCCCC---cc-ccccCCcEEEEhHHHHHHHHHHH----HH
Confidence 556789999974 22 3444455443222466664322221 11 11122333338888877776643 34
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHhhcCC
Q 036427 496 LKAMSQNALKLARPDAVFRIVQDLHELVRQRNF 528 (536)
Q Consensus 496 ~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~~~~ 528 (536)
|++....+..+ .++.+..+.+.+++++.
T Consensus 294 R~~~~~~ae~i-----I~~~~~~~~~~~~~~~~ 321 (338)
T PRK00676 294 RKEVNNKHKLS-----LREAAYKQWESYEKKLS 321 (338)
T ss_pred HHHHHHHHHHH-----HHHHHHHHHHHHHHHHh
Confidence 55555555554 45666666677766543
No 327
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=28.94 E-value=91 Score=30.74 Aligned_cols=107 Identities=15% Similarity=0.037 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhc--cccceeecCCCcccccchhhhhhhHHH
Q 036427 157 GHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHG--PLWKMTYYGTAPRVIHQSNFAATSTFI 234 (536)
Q Consensus 157 Gh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (536)
-....+++.|-.|+++++ |.+|.+++....... . ....+.....+ ..+...-. .+-......-
T Consensus 36 ~~D~~AlE~Alrlke~~~-g~~Vtvvs~Gp~~a~----~-~~~lr~aLAmGaD~avli~d~---------~~~g~D~~~t 100 (256)
T PRK03359 36 QYDLNAIEAACQLKQQAA-EAQVTALSVGGKALT----N-AKGRKDVLSRGPDELIVVIDD---------QFEQALPQQT 100 (256)
T ss_pred hhhHHHHHHHHHHhhhcC-CCEEEEEEECCcchh----h-HHHHHHHHHcCCCEEEEEecC---------cccCcCHHHH
Confidence 456788888888998743 368888876543210 0 00011111111 11111000 0000122233
Q ss_pred HHHHHHHHHhhCCCEEEEcC----cccchHHHHHHHHcCCCCCceEEEEecC
Q 036427 235 AREVAKGLMKYQPDIIISVH----PLMQHVPLRILRAKGLLKKIVFTTVITD 282 (536)
Q Consensus 235 ~~~l~~~l~~~kPDvVi~~~----~~~~~i~~~~~~~~g~~~~ip~v~~~~d 282 (536)
++.|...+++..||+|++-. .....+|..++..+| +|.+++..+
T Consensus 101 A~~La~ai~~~~~DLVl~G~~s~D~~tgqvg~~lAe~Lg----~P~vt~v~~ 148 (256)
T PRK03359 101 ASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILN----IPAINGVSK 148 (256)
T ss_pred HHHHHHHHHHhCCCEEEEcCccccCCCCcHHHHHHHHhC----CCceeeEEE
Confidence 45677778888899999743 234456778888888 787766554
No 328
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=28.87 E-value=1.2e+02 Score=29.81 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=23.1
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
||||+.=.+ |=|.....+|+++|+ . +.+|+|+..
T Consensus 1 mrILlTNDD--Gi~a~Gi~aL~~al~-~---~~dV~VVAP 34 (252)
T COG0496 1 MRILLTNDD--GIHAPGIRALARALR-E---GADVTVVAP 34 (252)
T ss_pred CeEEEecCC--ccCCHHHHHHHHHHh-h---CCCEEEEcc
Confidence 788877544 345566778889998 4 567777643
No 329
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=28.55 E-value=98 Score=30.34 Aligned_cols=38 Identities=11% Similarity=0.167 Sum_probs=31.5
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|+|.+. +.-|-|-.+.+..||.+|.++ |..|+++|...
T Consensus 1 ~~i~v~-gKGGvGKTT~a~nLA~~la~~---G~rvlliD~Dp 38 (267)
T cd02032 1 MVLAVY-GKGGIGKSTTSSNLSVALAKR---GKKVLQIGCDP 38 (267)
T ss_pred CEEEEe-cCCCCCHHHHHHHHHHHHHHC---CCcEEEEecCC
Confidence 677777 445559999999999999998 88999998753
No 330
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=28.45 E-value=1.3e+02 Score=32.72 Aligned_cols=54 Identities=17% Similarity=0.201 Sum_probs=40.7
Q ss_pred HHhhcCeEEECCChHHHHHHHHh----CCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 423 AMGACDCIITKAGPGTIAEAMIR----GLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 423 ll~~aDv~V~~sG~~tllEAma~----GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
+-..+|++|+-+|-+|++-|+.. ++||+.++. ...|++.+ +++++.+.|+.+++
T Consensus 259 l~~~~DlVIsiGGDGTlL~Aar~~~~~~iPILGIN~--------------G~LGFLt~i~~~e~~~~Le~il~ 317 (508)
T PLN02935 259 LHTKVDLVITLGGDGTVLWAASMFKGPVPPVVPFSM--------------GSLGFMTPFHSEQYRDCLDAILK 317 (508)
T ss_pred cccCCCEEEEECCcHHHHHHHHHhccCCCcEEEEeC--------------CCcceecccCHHHHHHHHHHHHc
Confidence 33578999999988888887664 578888663 12455554 78899999999987
No 331
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=28.36 E-value=5e+02 Score=27.73 Aligned_cols=92 Identities=14% Similarity=0.227 Sum_probs=51.0
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
.-|.++++--|.|-.+.+--||..|+++ +..|.++...... +..|..+.....-....+|.....
T Consensus 100 P~vImmvGLQGsGKTTt~~KLA~~lkk~---~~kvllVaaD~~R--------pAA~eQL~~La~q~~v~~f~~~~~---- 164 (451)
T COG0541 100 PTVILMVGLQGSGKTTTAGKLAKYLKKK---GKKVLLVAADTYR--------PAAIEQLKQLAEQVGVPFFGSGTE---- 164 (451)
T ss_pred CeEEEEEeccCCChHhHHHHHHHHHHHc---CCceEEEecccCC--------hHHHHHHHHHHHHcCCceecCCCC----
Confidence 3455555556679999999999999997 7788776543221 112222222221122222221100
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~ 255 (536)
.....++++-.+..++...|+||++..
T Consensus 165 ----~~Pv~Iak~al~~ak~~~~DvvIvDTA 191 (451)
T COG0541 165 ----KDPVEIAKAALEKAKEEGYDVVIVDTA 191 (451)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 012224455556677788999998753
No 332
>cd05566 PTS_IIB_galactitol PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is a galactitol-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain that are expressed on three distinct polypeptide chains, in contrast to other PTS sugar transporters. The three genes encoding these subunits (gatA, gatB, and gatC) comprise the gatCBA operon. Galactitol PTS permease takes up exogenous galactitol, releasing the phosphate ester into the cytoplasm in preparation for oxidation and further metabolism via a modified glycolytic pathway called the tagatose-6-phosphate glycolytic pathway. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include galactitol, chitobiose/lichenan, ascorbate, lactose, mannitol, fructose, and
Probab=28.34 E-value=2.3e+02 Score=22.38 Aligned_cols=62 Identities=19% Similarity=0.312 Sum_probs=31.7
Q ss_pred EEEEEecCCH--------HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEecc
Q 036427 387 QVLVICGRNK--------KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 387 ~~lvi~G~~~--------~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~ 454 (536)
+++++||.|- ++++.+.+.++...+.... ..++...+..+|++++..- .. -..++|+|....
T Consensus 2 ~ilivC~~G~~tS~~l~~~i~~~~~~~~i~~~v~~~~-~~~~~~~~~~~Dliist~~-~~----~~~~~p~i~v~~ 71 (89)
T cd05566 2 KILVACGTGVATSTVVASKVKELLKENGIDVKVEQCK-IAEVPSLLDDADLIVSTTK-VP----EDYGIPVINGLP 71 (89)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHHCCCceEEEEec-HHHhhcccCCCcEEEEcCC-cC----CCCCCCEEEEee
Confidence 3566776653 2333344333322232222 2344445678999888653 11 133689888763
No 333
>PRK05920 aromatic acid decarboxylase; Validated
Probab=28.21 E-value=1.1e+02 Score=29.07 Aligned_cols=35 Identities=9% Similarity=0.269 Sum_probs=25.8
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
++|||++.++|- ....-+..+.+.|.+. |++|.++
T Consensus 2 ~~krIllgITGs--iaa~ka~~lvr~L~~~---g~~V~vi 36 (204)
T PRK05920 2 KMKRIVLAITGA--SGAIYGVRLLECLLAA---DYEVHLV 36 (204)
T ss_pred CCCEEEEEEeCH--HHHHHHHHHHHHHHHC---CCEEEEE
Confidence 457899887663 3446888899999998 6777554
No 334
>PRK12342 hypothetical protein; Provisional
Probab=28.05 E-value=97 Score=30.52 Aligned_cols=46 Identities=15% Similarity=0.166 Sum_probs=32.4
Q ss_pred HHHHHHHHHHhhCCCEEEEcC----cccchHHHHHHHHcCCCCCceEEEEecCC
Q 036427 234 IAREVAKGLMKYQPDIIISVH----PLMQHVPLRILRAKGLLKKIVFTTVITDL 283 (536)
Q Consensus 234 ~~~~l~~~l~~~kPDvVi~~~----~~~~~i~~~~~~~~g~~~~ip~v~~~~d~ 283 (536)
-++.|...+++..||+|++-. .....++..++..+| +|++++..++
T Consensus 97 ta~~La~~i~~~~~DLVl~G~~s~D~~tgqvg~~lA~~Lg----~P~vt~v~~~ 146 (254)
T PRK12342 97 TAKALAAAIEKIGFDLLLFGEGSGDLYAQQVGLLLGELLQ----LPVINAVSKI 146 (254)
T ss_pred HHHHHHHHHHHhCCCEEEEcCCcccCCCCCHHHHHHHHhC----CCcEeeEEEE
Confidence 345677778888899999743 234456778888888 7887666543
No 335
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=27.91 E-value=5.5e+02 Score=24.70 Aligned_cols=67 Identities=7% Similarity=-0.173 Sum_probs=37.0
Q ss_pred CCcEEEEEecCC-HHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCC-----hHHHHHHHHhCCcEEEeccC
Q 036427 384 PIGQVLVICGRN-KKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAG-----PGTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 384 ~~~~~lvi~G~~-~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG-----~~tllEAma~GlPVI~~~~~ 455 (536)
.+.++.++.-.- +++.+..+ ..++++.-.--+ ...+..++++|..+. -...-+|-+.|++|...+.+
T Consensus 47 ~gA~VtVVap~i~~el~~l~~----~~~i~~~~r~~~-~~dl~g~~LViaATdD~~vN~~I~~~a~~~~~lvn~vd~p 119 (223)
T PRK05562 47 KGCYVYILSKKFSKEFLDLKK----YGNLKLIKGNYD-KEFIKDKHLIVIATDDEKLNNKIRKHCDRLYKLYIDCSDY 119 (223)
T ss_pred CCCEEEEEcCCCCHHHHHHHh----CCCEEEEeCCCC-hHHhCCCcEEEECCCCHHHHHHHHHHHHHcCCeEEEcCCc
Confidence 345555554332 34443322 235666543212 345678898888774 22334456679999987754
No 336
>COG0788 PurU Formyltetrahydrofolate hydrolase [Nucleotide transport and metabolism]
Probab=27.55 E-value=3.3e+02 Score=27.04 Aligned_cols=27 Identities=22% Similarity=0.196 Sum_probs=19.6
Q ss_pred CCCCCCCCceEEEEeCCCCchHHHHHHHH
Q 036427 137 NGIENDQPKKVLILMSDTGGGHRASAEAI 165 (536)
Q Consensus 137 ~~~~~~~~mKIL~~~~~~GgGh~~~~l~L 165 (536)
........|||+++.+.. ||.-.-+-.
T Consensus 83 ~~~~~~~~~ri~i~VSK~--~HCL~DLL~ 109 (287)
T COG0788 83 RLHDAAQRKRIAILVSKE--DHCLGDLLY 109 (287)
T ss_pred EEeccccCceEEEEEech--HHHHHHHHH
Confidence 445566778999999998 777665533
No 337
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=27.37 E-value=5.7e+02 Score=27.29 Aligned_cols=40 Identities=13% Similarity=0.271 Sum_probs=31.6
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHH-hccCCceEEEEeeccc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFH-EKFGNEYQVFVTDLWS 186 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~-~~~g~g~eV~v~~~~~ 186 (536)
+.+|.++++..|.|-...+..||..|. +. |..|.+++...
T Consensus 98 ~p~vi~~vG~~GsGKTTtaakLA~~l~~~~---g~kV~lV~~D~ 138 (428)
T TIGR00959 98 PPTVILMVGLQGSGKTTTCGKLAYYLKKKQ---GKKVLLVACDL 138 (428)
T ss_pred CCEEEEEECCCCCcHHHHHHHHHHHHHHhC---CCeEEEEeccc
Confidence 357888888888899999999999987 45 67787776543
No 338
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=27.37 E-value=1.6e+02 Score=28.93 Aligned_cols=43 Identities=23% Similarity=0.321 Sum_probs=29.5
Q ss_pred HHHHHHHHhhCCCEEE-EcCcccchHH---HHHHHHcCCCCCceEEEEecC
Q 036427 236 REVAKGLMKYQPDIII-SVHPLMQHVP---LRILRAKGLLKKIVFTTVITD 282 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi-~~~~~~~~i~---~~~~~~~g~~~~ip~v~~~~d 282 (536)
..+.++|++.++++|| ++||+...+. ..+++..+ +|++-+...
T Consensus 55 ~~l~~~l~~~~i~~VIDATHPfA~~is~~a~~ac~~~~----ipyiR~eR~ 101 (248)
T PRK08057 55 EGLAAYLREEGIDLVIDATHPYAAQISANAAAACRALG----IPYLRLERP 101 (248)
T ss_pred HHHHHHHHHCCCCEEEECCCccHHHHHHHHHHHHHHhC----CcEEEEeCC
Confidence 4778889999999998 5788865442 33344444 898766543
No 339
>PRK03202 6-phosphofructokinase; Provisional
Probab=27.27 E-value=6.8e+02 Score=25.52 Aligned_cols=36 Identities=19% Similarity=0.231 Sum_probs=26.9
Q ss_pred CceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 144 PKKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 144 ~mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
||||+++++| --.|--.....+.+...+. +++|+-+
T Consensus 1 mk~i~Il~sGG~apG~Na~i~~~~~~~~~~---g~~v~g~ 37 (320)
T PRK03202 1 MKRIGVLTSGGDAPGMNAAIRAVVRTAISE---GLEVYGI 37 (320)
T ss_pred CcEEEEECCCCCcHHHHHHHHHHHHHHHHC---CCeEEEE
Confidence 5799999864 2267777778888888887 6788655
No 340
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=27.22 E-value=6.3e+02 Score=25.67 Aligned_cols=45 Identities=22% Similarity=0.285 Sum_probs=28.7
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccc
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSD 187 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~ 187 (536)
+.+..+|.|+.. -|-|-..-.-.|...|.++ ||.+-|+.+|..+.
T Consensus 48 tG~a~viGITG~-PGaGKSTli~~L~~~l~~~-G~rVaVlAVDPSSp 92 (323)
T COG1703 48 TGNAHVIGITGV-PGAGKSTLIEALGRELRER-GHRVAVLAVDPSSP 92 (323)
T ss_pred CCCCcEEEecCC-CCCchHHHHHHHHHHHHHC-CcEEEEEEECCCCC
Confidence 345556666532 2348888999999999998 44344455565443
No 341
>PRK09004 FMN-binding protein MioC; Provisional
Probab=27.12 E-value=1.1e+02 Score=27.23 Aligned_cols=38 Identities=13% Similarity=0.173 Sum_probs=27.6
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
|.||+|+.....|-....|..|++.+.+. |+++.+.+.
T Consensus 1 M~~i~I~ygS~tGnae~~A~~l~~~~~~~---g~~~~~~~~ 38 (146)
T PRK09004 1 MADITLISGSTLGGAEYVADHLAEKLEEA---GFSTETLHG 38 (146)
T ss_pred CCeEEEEEEcCchHHHHHHHHHHHHHHHc---CCceEEecc
Confidence 35788886554367788888999999887 677766543
No 342
>PF06626 DUF1152: Protein of unknown function (DUF1152); InterPro: IPR010581 This family consists of several hypothetical archaeal proteins of unknown function.
Probab=27.01 E-value=2.5e+02 Score=28.40 Aligned_cols=26 Identities=27% Similarity=0.362 Sum_probs=22.1
Q ss_pred CchHHHHHHHHHHHHHhccCCceEEEEee
Q 036427 155 GGGHRASAEAIKAAFHEKFGNEYQVFVTD 183 (536)
Q Consensus 155 GgGh~~~~l~La~~L~~~~g~g~eV~v~~ 183 (536)
|||.+..++.++.+|++. |.++.+..
T Consensus 7 GGGDvv~a~~l~~~l~~~---G~~~~lg~ 32 (297)
T PF06626_consen 7 GGGDVVSALPLAFALRKL---GKEVVLGS 32 (297)
T ss_pred CcHHHHHHHHHHHHHHhc---CCceEEEE
Confidence 489999999999999998 77776664
No 343
>PTZ00408 NAD-dependent deacetylase; Provisional
Probab=26.81 E-value=2e+02 Score=28.04 Aligned_cols=49 Identities=16% Similarity=0.234 Sum_probs=31.5
Q ss_pred CCCEEEecC-h---hhHHHHHhhcCeEEEC--CC-----hHHHHHHHHhCCcEEEeccCC
Q 036427 408 KIPVQVKGF-V---SKMEEAMGACDCIITK--AG-----PGTIAEAMIRGLPIILNDFIA 456 (536)
Q Consensus 408 ~~~V~~~G~-v---~~l~~ll~~aDv~V~~--sG-----~~tllEAma~GlPVI~~~~~~ 456 (536)
.++|.+.|. . +.+.+.+..||++++- |. ..-+.+|...|.|+|.++...
T Consensus 150 rP~vV~FGE~~~~~~~~~~~~~~~DlllviGTSl~V~pa~~l~~~a~~~g~~vi~IN~~~ 209 (242)
T PTZ00408 150 RPHIVWFGEMPLYMDEIESVMSKTDLFVAVGTSGNVYPAAGFVGRAQFYGATTLELNLEE 209 (242)
T ss_pred CCCEEEcCCCCCcHHHHHHHHHhCCEEEEEccCCccccHHHHHHHHHHcCCeEEEECCCC
Confidence 345666555 1 3556678899986653 21 223346888999999988643
No 344
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=26.74 E-value=5.5e+02 Score=24.22 Aligned_cols=38 Identities=21% Similarity=0.166 Sum_probs=26.1
Q ss_pred hhHHHHHhhcCeEEECCC-h-------------HHHHHHHHhCCcEEEeccC
Q 036427 418 SKMEEAMGACDCIITKAG-P-------------GTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~~sG-~-------------~tllEAma~GlPVI~~~~~ 455 (536)
++..+.+..||++++++| . ..+-++...|+|++.+-.+
T Consensus 72 ~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAG 123 (212)
T cd03146 72 EDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAG 123 (212)
T ss_pred ccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHh
Confidence 366788899999999875 1 1233455569998886643
No 345
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=25.95 E-value=1.1e+02 Score=27.76 Aligned_cols=36 Identities=25% Similarity=0.451 Sum_probs=25.6
Q ss_pred HHHHHh-hcCeEEECC---------C-hHHHHHHHHhCCcEEEeccC
Q 036427 420 MEEAMG-ACDCIITKA---------G-PGTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 420 l~~ll~-~aDv~V~~s---------G-~~tllEAma~GlPVI~~~~~ 455 (536)
+..-+. .+|++|..- | --.+.||++.|+||++.-..
T Consensus 86 l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~ 132 (159)
T PF10649_consen 86 LRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPP 132 (159)
T ss_pred HHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECH
Confidence 334443 489988863 2 34678899999999997753
No 346
>PRK07308 flavodoxin; Validated
Probab=25.79 E-value=1.3e+02 Score=26.44 Aligned_cols=37 Identities=16% Similarity=0.165 Sum_probs=25.7
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
+||.|+-....|-....|..+++.|.+. |+++.+.+.
T Consensus 2 ~~~~IvY~S~tGnTe~iA~~ia~~l~~~---g~~~~~~~~ 38 (146)
T PRK07308 2 ALAKIVYASMTGNTEEIADIVADKLREL---GHDVDVDEC 38 (146)
T ss_pred ceEEEEEECCCchHHHHHHHHHHHHHhC---CCceEEEec
Confidence 3666665444367777799999999887 666666544
No 347
>PRK05569 flavodoxin; Provisional
Probab=25.75 E-value=1.6e+02 Score=25.57 Aligned_cols=38 Identities=26% Similarity=0.292 Sum_probs=26.9
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
|+||+++-....|-....+..+++.+.+. |++|.+.+.
T Consensus 1 m~ki~iiY~S~tGnT~~iA~~i~~~~~~~---g~~v~~~~~ 38 (141)
T PRK05569 1 MKKVSIIYWSCGGNVEVLANTIADGAKEA---GAEVTIKHV 38 (141)
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHhC---CCeEEEEEC
Confidence 35887775433267788888999999887 677766654
No 348
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit. In several thermophilic species (Methanobacterium thermoautotrophicum, Methanococcus jannaschii, Aquifex aeolicus), the large subunit appears split, at different points, into two separate genes.
Probab=25.59 E-value=1e+02 Score=36.96 Aligned_cols=40 Identities=25% Similarity=0.335 Sum_probs=30.1
Q ss_pred CCceEEEEeCCC---C--chHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 143 QPKKVLILMSDT---G--GGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 143 ~~mKIL~~~~~~---G--gGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
.-+|||++.+|. | +=+...+..++++|++. |++|++++..
T Consensus 5 ~~~kvlviG~g~~~igq~~e~d~sg~q~~kalke~---G~~vi~v~~n 49 (1050)
T TIGR01369 5 DIKKILVIGSGPIVIGQAAEFDYSGSQACKALKEE---GYRVILVNSN 49 (1050)
T ss_pred CCcEEEEECCCcchhcchhcccchHHHHHHHHHHc---CCEEEEEecc
Confidence 357999997662 2 23456788899999998 8999888753
No 349
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=25.54 E-value=8.2e+02 Score=25.86 Aligned_cols=161 Identities=16% Similarity=0.129 Sum_probs=76.1
Q ss_pred CCEEEEcCHHHHHHHHHh--CCCCCCEEEeCCCCCCCCCCCCC-chHHHHHHcCCCCCCCEEEE-ecCCCCC--CcHHHH
Q 036427 295 VTRCYCPTADVAKRAMKA--GLQASQIKVYGLPVRPSFVKPVR-PKVELRRELGMDEDLPAVLL-MGGGEGM--GPIEAT 368 (536)
Q Consensus 295 ~d~vi~~S~~~~~~l~~~--g~~~~ki~vignpv~~~~~~~~~-~~~~~r~~lgi~~~~~~il~-~gg~~g~--k~~~~~ 368 (536)
.|.|+-..+...+.+.+. ..+++-|.++..++..-.-.... --.++++++.-..+.+++.+ +.|..+. ......
T Consensus 59 ~d~V~Gg~~~L~~~i~~~~~~~~p~~I~v~~tC~~~liGdDi~~v~~~~~~~~~~~~~~~vi~v~tpgf~g~~~~G~~~a 138 (428)
T cd01965 59 DAAVFGGEDNLIEALKNLLSRYKPDVIGVLTTCLTETIGDDVAGFIKEFRAEGPEPADFPVVYASTPSFKGSHETGYDNA 138 (428)
T ss_pred CCeeECcHHHHHHHHHHHHHhcCCCEEEEECCcchhhcCCCHHHHHHHHHhhccCCCCCeEEEeeCCCCCCcHHHHHHHH
Confidence 356665555555544432 23344456666655432211110 01123332211234556555 3444432 234456
Q ss_pred HHHHHHHhhhcccCCCCcEEEEEecCC------HHHHHHHHcCCCCCCEEEe------------------c--ChhhHHH
Q 036427 369 ARALGNALYDENLGEPIGQVLVICGRN------KKLANKLLSTDWKIPVQVK------------------G--FVSKMEE 422 (536)
Q Consensus 369 l~al~~~l~~~~~~~~~~~~lvi~G~~------~~l~~~l~~~~~~~~V~~~------------------G--~v~~l~~ 422 (536)
+.++.+.+...........+.++.|.. .++++.+++.++..+..+. | .++++.+
T Consensus 139 ~~al~~~~~~~~~~~~~~~VNlig~~~~~~~d~~el~~lL~~~Gl~v~~~~~~s~~~d~~~~~~~~~~~~gg~~~e~i~~ 218 (428)
T cd01965 139 VKAIIEQLAKPSEVKKNGKVNLLPGFPLTPGDVREIKRILEAFGLEPIILPDLSDSLDGHLTDGYSPLTKGGTTLEEIRD 218 (428)
T ss_pred HHHHHHHHhcccCCCCCCeEEEECCCCCCccCHHHHHHHHHHcCCCEEEecCcccccCCCCCCCccccCCCCCcHHHHHH
Confidence 666666554211001222344443332 3677888888887666552 1 1244443
Q ss_pred HHhhcCe-EEECC-ChHHHHHHHH--hCCcEEEeccCC
Q 036427 423 AMGACDC-IITKA-GPGTIAEAMI--RGLPIILNDFIA 456 (536)
Q Consensus 423 ll~~aDv-~V~~s-G~~tllEAma--~GlPVI~~~~~~ 456 (536)
+..|.+ +++.. -+..+.|.|. +|+|-+..+.+.
T Consensus 219 -~~~A~lniv~~~~~~~~~a~~L~e~~GiP~~~~~~p~ 255 (428)
T cd01965 219 -AGNAKATIALGEYSGRKAAKALEEKFGVPYILFPTPI 255 (428)
T ss_pred -hccCcEEEEEChhhhHHHHHHHHHHHCCCeeecCCCc
Confidence 334444 33332 2455666655 999999887543
No 350
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=25.45 E-value=1.4e+02 Score=29.32 Aligned_cols=38 Identities=21% Similarity=0.237 Sum_probs=29.3
Q ss_pred eEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 146 KIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
||+-++..-|-|-.+.+..||.+|.++ |..|+++|...
T Consensus 3 ~iIav~~KGGVGKTT~~~nLA~~la~~---G~kVLliD~Dp 40 (270)
T PRK13185 3 LVLAVYGKGGIGKSTTSSNLSAAFAKL---GKKVLQIGCDP 40 (270)
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHC---CCeEEEEeccC
Confidence 444444544458999999999999998 88999998753
No 351
>PRK13234 nifH nitrogenase reductase; Reviewed
Probab=25.40 E-value=1.4e+02 Score=29.91 Aligned_cols=39 Identities=13% Similarity=0.204 Sum_probs=29.8
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|.+|.|. ..-|=|-...+..||.+|.+. |..|+++|...
T Consensus 4 ~~~iai~-~KGGvGKTt~~~nLa~~la~~---g~kVLliD~D~ 42 (295)
T PRK13234 4 LRQIAFY-GKGGIGKSTTSQNTLAALVEM---GQKILIVGCDP 42 (295)
T ss_pred ceEEEEE-CCCCccHHHHHHHHHHHHHHC---CCeEEEEeccc
Confidence 3455564 444458888899999999998 88999998644
No 352
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=25.36 E-value=9.2e+02 Score=26.41 Aligned_cols=161 Identities=9% Similarity=0.022 Sum_probs=73.3
Q ss_pred CEEEEcCHHHHHHHHHh-C-CCCCCEEEeCCCCCCCCCCCC-CchHHHHHHcCCCCCCCEEEE-ecCCCCC--CcHHHHH
Q 036427 296 TRCYCPTADVAKRAMKA-G-LQASQIKVYGLPVRPSFVKPV-RPKVELRRELGMDEDLPAVLL-MGGGEGM--GPIEATA 369 (536)
Q Consensus 296 d~vi~~S~~~~~~l~~~-g-~~~~ki~vignpv~~~~~~~~-~~~~~~r~~lgi~~~~~~il~-~gg~~g~--k~~~~~l 369 (536)
+.|+-..+...+.+... . .+++-|.|+..++..-.=... .--.+.+++..++.+.|++.+ +.+..|. ......+
T Consensus 121 ~aVfGG~~~L~e~I~~~~~~y~P~~I~V~tTC~~evIGDDi~a~i~~~~~~~~~p~~~pVi~v~TpgF~Gs~~~Gyd~a~ 200 (515)
T TIGR01286 121 AAVFGGLKNMVDGLQNCYALYKPKMIAVSTTCMAEVIGDDLNAFIGNAKKEGFIPDDFPVPFAHTPSFVGSHITGYDNMF 200 (515)
T ss_pred ceeeCcHHHHHHHHHHHHHhcCCCEEEEeCCcHHHHhhccHHHHHHHHHHhcCCCCCCceEEeeCCCCcccHHHHHHHHH
Confidence 45665556655555432 1 234444455444322111100 001223444445556666544 3333332 3345566
Q ss_pred HHHHHHhhhccc----CCCCcEEEEEecCC------HHHHHHHHcCCCCCCEE-----------------EecC--hhhH
Q 036427 370 RALGNALYDENL----GEPIGQVLVICGRN------KKLANKLLSTDWKIPVQ-----------------VKGF--VSKM 420 (536)
Q Consensus 370 ~al~~~l~~~~~----~~~~~~~lvi~G~~------~~l~~~l~~~~~~~~V~-----------------~~G~--v~~l 420 (536)
.++.+.+.+... ..++..+-++.|.. .++++.++..++..++. +.|- ++++
T Consensus 201 ~ail~~l~~~~~~~~~~~~~~~VNii~g~~~~~gd~~eikrlL~~~Gi~~~~l~d~s~~~d~p~~g~~~~~~ggttleei 280 (515)
T TIGR01286 201 KGILEYFTKGSMDDKVVGSNGKINIIPGFETYIGNFREIKRILSLMGVGYTLLSDPEEVLDTPADGEFRMYAGGTTLEEM 280 (515)
T ss_pred HHHHHHHhhcccccccCCCCCeEEEECCCCCCchhHHHHHHHHHHcCCCeEEccCccccccCCCCCCccccCCCCCHHHH
Confidence 666665542110 11222343443332 26677777777654431 1121 2355
Q ss_pred HHHHhhcCeEEE-CCChHHHHHHHH--hCCcEEEeccCC
Q 036427 421 EEAMGACDCIIT-KAGPGTIAEAMI--RGLPIILNDFIA 456 (536)
Q Consensus 421 ~~ll~~aDv~V~-~sG~~tllEAma--~GlPVI~~~~~~ 456 (536)
.+.-++.--+++ +.......|.+. +|+|.+..+.+-
T Consensus 281 ~~a~~A~~~ivl~~~~~~~~a~~l~~~~g~p~~~~~~Pi 319 (515)
T TIGR01286 281 KDAPNAEATVLLQPYTLRKTKEYIEKTWKQETPKLNIPL 319 (515)
T ss_pred HHhhhCcEEEEEchhhhHHHHHHHHHHhCCCcccCCCCc
Confidence 444333333333 323445666665 899987776543
No 353
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=25.23 E-value=3.9e+02 Score=22.02 Aligned_cols=63 Identities=16% Similarity=0.302 Sum_probs=40.0
Q ss_pred CCcEEEEEecCCHHHHHHH-HcCCCCCCEEEecChhhHHHHHh--hcCeEEECC--C--hHHHHHHHHhCCcEEEec
Q 036427 384 PIGQVLVICGRNKKLANKL-LSTDWKIPVQVKGFVSKMEEAMG--ACDCIITKA--G--PGTIAEAMIRGLPIILND 453 (536)
Q Consensus 384 ~~~~~lvi~G~~~~l~~~l-~~~~~~~~V~~~G~v~~l~~ll~--~aDv~V~~s--G--~~tllEAma~GlPVI~~~ 453 (536)
++..+..++...++-.+.. +..+. . ..+++.+++. ..|+++..+ . .-.+.+++..|++|++=.
T Consensus 24 ~~~~v~~v~d~~~~~~~~~~~~~~~----~---~~~~~~~ll~~~~~D~V~I~tp~~~h~~~~~~~l~~g~~v~~EK 93 (120)
T PF01408_consen 24 PDFEVVAVCDPDPERAEAFAEKYGI----P---VYTDLEELLADEDVDAVIIATPPSSHAEIAKKALEAGKHVLVEK 93 (120)
T ss_dssp TTEEEEEEECSSHHHHHHHHHHTTS----E---EESSHHHHHHHTTESEEEEESSGGGHHHHHHHHHHTTSEEEEES
T ss_pred CCcEEEEEEeCCHHHHHHHHHHhcc----c---chhHHHHHHHhhcCCEEEEecCCcchHHHHHHHHHcCCEEEEEc
Confidence 5566666777776433333 33332 2 2345678887 577766654 2 456788999999988844
No 354
>PLN02496 probable phosphopantothenoylcysteine decarboxylase
Probab=25.22 E-value=1.5e+02 Score=28.24 Aligned_cols=70 Identities=16% Similarity=0.136 Sum_probs=40.7
Q ss_pred HHHHhhcCeEEE-CC----------C-----hHHHHHHHHhCCcEEEeccCCc------cccCChhhHhhCCceeecC--
Q 036427 421 EEAMGACDCIIT-KA----------G-----PGTIAEAMIRGLPIILNDFIAG------QEAGNVPYVVENGCGKFSK-- 476 (536)
Q Consensus 421 ~~ll~~aDv~V~-~s----------G-----~~tllEAma~GlPVI~~~~~~~------~e~~na~~lv~~g~g~~~~-- 476 (536)
-++.+.||++|. |. | -.++++|..+++|+++.|.-.. .-..|...|.+.|.-++-+
T Consensus 91 I~La~wAD~~vVaPaTaNtlaKiA~GiaDnlltt~l~a~~~~~Pv~iaPaMN~~Mw~~Pat~~nl~~L~~~G~~vi~P~~ 170 (209)
T PLN02496 91 IELRRWADVMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYSKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVT 170 (209)
T ss_pred hHhhhhhCEEEEEeCCHHHHHHHHcccCCcHHHHHHHHcCCCCCEEEEeCCCHHHHhCHHHHHHHHHHHHCCCEEECCCc
Confidence 366678998665 42 3 1344566667899999996211 0012445555555443321
Q ss_pred --------------CHHHHHHHHHHHhC
Q 036427 477 --------------SPKEIANMVSQWFG 490 (536)
Q Consensus 477 --------------d~~~La~~I~~ll~ 490 (536)
+++++.+.+..++.
T Consensus 171 g~lAcg~~G~Grm~ep~~I~~~i~~~l~ 198 (209)
T PLN02496 171 KRLACGDYGNGAMAEPSLIYSTVRLFLE 198 (209)
T ss_pred CcccCCCcCCCCCCCHHHHHHHHHHHHh
Confidence 67777777766665
No 355
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=25.18 E-value=1.1e+02 Score=30.89 Aligned_cols=37 Identities=16% Similarity=0.289 Sum_probs=29.6
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
||++|+++.-|=|-...+.++|-++.++ |..+.+++.
T Consensus 1 ~r~~~~~GKGGVGKTT~aaA~A~~~A~~---G~rtLlvS~ 37 (305)
T PF02374_consen 1 MRILFFGGKGGVGKTTVAAALALALARR---GKRTLLVST 37 (305)
T ss_dssp -SEEEEEESTTSSHHHHHHHHHHHHHHT---TS-EEEEES
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHhhC---CCCeeEeec
Confidence 7899998766669999999999999998 888888753
No 356
>PLN02554 UDP-glycosyltransferase family protein
Probab=25.13 E-value=1.1e+02 Score=33.09 Aligned_cols=38 Identities=11% Similarity=0.131 Sum_probs=27.9
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEee
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTD 183 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~ 183 (536)
+++|+++..-. -||..+.+.||+.|..+ |+++.|+++.
T Consensus 2 ~~hvvl~P~pa-qGHi~P~l~LAk~La~~-G~~~~vT~v~ 39 (481)
T PLN02554 2 KIELVFIPSPG-IGHLRPTVELAKLLVDS-DDRLSITVII 39 (481)
T ss_pred ceEEEEeCCcc-hhhHHHHHHHHHHHHhC-CCCEEEEEEe
Confidence 45777776544 59999999999999987 2227776654
No 357
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=25.08 E-value=1.4e+02 Score=31.22 Aligned_cols=41 Identities=20% Similarity=0.310 Sum_probs=31.0
Q ss_pred CCceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 143 QPKKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 143 ~~mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
.++||+.+++. -|-|-...+..||.+|.+. |+.|+++|...
T Consensus 102 ~~~~vI~v~n~KGGvGKTT~a~nLA~~La~~---G~rVLlID~Dp 143 (387)
T TIGR03453 102 EHLQVIAVTNFKGGSGKTTTAAHLAQYLALR---GYRVLAIDLDP 143 (387)
T ss_pred CCceEEEEEccCCCcCHHHHHHHHHHHHHhc---CCCEEEEecCC
Confidence 44566555543 3448889999999999998 88999998753
No 358
>PRK10037 cell division protein; Provisional
Probab=24.94 E-value=1.3e+02 Score=29.17 Aligned_cols=38 Identities=16% Similarity=0.086 Sum_probs=28.9
Q ss_pred eEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 146 KIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
.|+|....-|=|-...+..||.+|.++ |..|+++|...
T Consensus 3 ~iav~n~KGGvGKTT~a~nLA~~La~~---G~rVLlID~D~ 40 (250)
T PRK10037 3 ILGLQGVRGGVGTTSITAALAWSLQML---GENVLVIDACP 40 (250)
T ss_pred EEEEecCCCCccHHHHHHHHHHHHHhc---CCcEEEEeCCh
Confidence 344444444458888899999999998 88999998754
No 359
>COG3613 Nucleoside 2-deoxyribosyltransferase [Nucleotide transport and metabolism]
Probab=24.83 E-value=81 Score=28.94 Aligned_cols=36 Identities=22% Similarity=0.268 Sum_probs=27.5
Q ss_pred HHHHhhcCeEEECC-------ChHHHHH---HHHhCCcEEEeccCC
Q 036427 421 EEAMGACDCIITKA-------GPGTIAE---AMIRGLPIILNDFIA 456 (536)
Q Consensus 421 ~~ll~~aDv~V~~s-------G~~tllE---Ama~GlPVI~~~~~~ 456 (536)
...+..||++|.-- -++|..| |.|.|+||+.....+
T Consensus 63 ~~~i~~aD~vla~ld~fr~~~DsGTa~E~GYa~AlgKPv~~~~~d~ 108 (172)
T COG3613 63 IKLIDQADIVLANLDPFRPDPDSGTAFELGYAIALGKPVYAYRKDA 108 (172)
T ss_pred HHHHhhcCEEEEecCCCCCCCCCcchHHHHHHHHcCCceEEEeecc
Confidence 36688999877531 1569999 899999999988543
No 360
>PRK00170 azoreductase; Reviewed
Probab=24.67 E-value=1.6e+02 Score=27.38 Aligned_cols=43 Identities=28% Similarity=0.377 Sum_probs=26.2
Q ss_pred CceEEEEeCC-CCc-hHHH-HHHHHHHHHHhccCCceEEEEeecccc
Q 036427 144 PKKVLILMSD-TGG-GHRA-SAEAIKAAFHEKFGNEYQVFVTDLWSD 187 (536)
Q Consensus 144 ~mKIL~~~~~-~Gg-Gh~~-~~l~La~~L~~~~g~g~eV~v~~~~~~ 187 (536)
|||||++.+. ... |... -+..+++.+.++++ +++|.+.++...
T Consensus 1 Mmkil~i~gSpr~~~s~s~~l~~~~~~~l~~~~~-~~~v~~~dL~~~ 46 (201)
T PRK00170 1 MSKVLVIKSSILGDYSQSMQLGDAFIEAYKEAHP-DDEVTVRDLAAE 46 (201)
T ss_pred CCeEEEEecCCCCCCcHHHHHHHHHHHHHHHhCC-CCeEEEEECCCC
Confidence 5899988754 222 3333 33456667776533 678888887543
No 361
>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated
Probab=24.58 E-value=79 Score=33.79 Aligned_cols=33 Identities=21% Similarity=0.049 Sum_probs=24.1
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
|+||||+-.+. .+..+++++++. |+++++++..
T Consensus 2 ~k~iLi~g~g~------~a~~i~~aa~~~---G~~vv~~~~~ 34 (451)
T PRK08591 2 FDKILIANRGE------IALRIIRACKEL---GIKTVAVHST 34 (451)
T ss_pred cceEEEECCCH------HHHHHHHHHHHc---CCeEEEEcCh
Confidence 67999984332 256788999998 8888877543
No 362
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=24.57 E-value=1.6e+02 Score=28.90 Aligned_cols=51 Identities=16% Similarity=0.222 Sum_probs=36.6
Q ss_pred hcCeEEECCChHHHHHHHH----hCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhC
Q 036427 426 ACDCIITKAGPGTIAEAMI----RGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFG 490 (536)
Q Consensus 426 ~aDv~V~~sG~~tllEAma----~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~ 490 (536)
.+|++|+-+|-+|++.|+. .++|++.++.+ ..|++.+ +++++.+.+.++..
T Consensus 25 ~~Dlvi~iGGDGTlL~a~~~~~~~~~PvlGIN~G--------------~lGFL~~~~~~~e~~~~l~~~~~ 81 (246)
T PRK04761 25 EADVIVALGGDGFMLQTLHRYMNSGKPVYGMNRG--------------SVGFLMNEYSEDDLLERIAAAEP 81 (246)
T ss_pred cCCEEEEECCCHHHHHHHHHhcCCCCeEEEEeCC--------------CCCcccCCCCHHHHHHHHHHhhc
Confidence 3799999888888887654 36899998742 1355543 67788888877765
No 363
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=24.53 E-value=1.6e+02 Score=29.28 Aligned_cols=35 Identities=11% Similarity=0.005 Sum_probs=22.3
Q ss_pred CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCC
Q 036427 246 QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDL 283 (536)
Q Consensus 246 kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~ 283 (536)
+.|++|+...-..+++..+++... +.|++...|..
T Consensus 172 ~advyHsvstGyAgl~g~~~k~~~---g~P~lLTEHGI 206 (268)
T PF11997_consen 172 KADVYHSVSTGYAGLLGALAKYRY---GRPFLLTEHGI 206 (268)
T ss_pred CCCEEecCCccHHHHHHHHHHHHh---CCCEEEecCCc
Confidence 359999987666666555555432 38987665543
No 364
>PF12996 DUF3880: DUF based on E. rectale Gene description (DUF3880); InterPro: IPR024542 This entry represents proteins of unknown function. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture [].
Probab=24.19 E-value=1.7e+02 Score=22.91 Aligned_cols=43 Identities=9% Similarity=0.145 Sum_probs=35.1
Q ss_pred ccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCC
Q 036427 291 FHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVR 335 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~ 335 (536)
+....|.+++......+.+++.|. .++..+|...++..+.+..
T Consensus 15 i~~~~~~iFt~D~~~~~~~~~~G~--~~V~yLPLAa~~~~~~p~~ 57 (79)
T PF12996_consen 15 IANSYDYIFTFDRSFVEEYRNLGA--ENVFYLPLAANPERFRPIP 57 (79)
T ss_pred hCCCCCEEEEECHHHHHHHHHcCC--CCEEEccccCCHHHhCccc
Confidence 356778999999999999998875 4688999988888776653
No 365
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=24.16 E-value=5.5e+02 Score=25.67 Aligned_cols=18 Identities=11% Similarity=0.346 Sum_probs=15.1
Q ss_pred HHHHHHHhhCCCEEEEcC
Q 036427 237 EVAKGLMKYQPDIIISVH 254 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~ 254 (536)
.|.+.++..+||++|...
T Consensus 96 ~L~e~i~~v~ptvlIG~S 113 (279)
T cd05312 96 SLLEVVKAVKPTVLIGLS 113 (279)
T ss_pred CHHHHHHhcCCCEEEEeC
Confidence 567789999999999865
No 366
>COG0745 OmpR Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]
Probab=24.05 E-value=4.2e+02 Score=25.47 Aligned_cols=31 Identities=29% Similarity=0.445 Sum_probs=23.1
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEee
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTD 183 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~ 183 (536)
||||++-.+. .....|...|.+. |++|..++
T Consensus 1 ~~ILiveDd~-----~i~~~l~~~L~~~---g~~v~~~~ 31 (229)
T COG0745 1 MRILLVEDDP-----ELAELLKEYLEEE---GYEVDVAA 31 (229)
T ss_pred CeEEEEcCCH-----HHHHHHHHHHHHC---CCEEEEEC
Confidence 5788887665 5566678888888 88887764
No 367
>TIGR00460 fmt methionyl-tRNA formyltransferase. The top-scoring characterized proteins other than methionyl-tRNA formyltransferase (fmt) itself are formyltetrahydrofolate dehydrogenases. The mitochondrial methionyl-tRNA formyltransferases are so divergent that, in a multiple alignment of bacterial fmt, mitochondrial fmt, and formyltetrahydrofolate dehydrogenases, the mitochondrial fmt appears the most different. However, because both bacterial and mitochondrial fmt are included in the seed alignment, all credible fmt sequences score higher than any non-fmt sequence. This enzyme modifies Met on initiator tRNA to f-Met.
Probab=23.97 E-value=5.1e+02 Score=26.20 Aligned_cols=18 Identities=28% Similarity=0.427 Sum_probs=13.9
Q ss_pred HHHHHHHhhCCCEEEEcC
Q 036427 237 EVAKGLMKYQPDIIISVH 254 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~ 254 (536)
.+.+.+++.+||++++.+
T Consensus 69 ~~~~~l~~~~~Dliv~~~ 86 (313)
T TIGR00460 69 EELPLVRELKPDVIVVVS 86 (313)
T ss_pred HHHHHHHhhCCCEEEEcc
Confidence 334568889999999875
No 368
>cd00501 Peptidase_C15 Pyroglutamyl peptidase (PGP) type I, also known as pyrrolidone carboxyl peptidase (pcp) type I: Enzymes responsible for cleaving pyroglutamate (pGlu) from the N-terminal end of specialized proteins. The N-terminal pGlu protects these proteins from proteolysis by other proteases until the pGlu is removed by a PGP. PGPs are cysteine proteases with a Cys-His-Glu/Asp catalytic triad. Type I PGPs are found in a wide variety of prokaryotes and eukaryotes. It is not clear whether the functional form is a monomer, a homodimer, or a homotetramer.
Probab=23.66 E-value=2.2e+02 Score=26.55 Aligned_cols=28 Identities=21% Similarity=0.118 Sum_probs=18.3
Q ss_pred ceEEEEeC-CCCchHHHHHHHHHHHHHhc
Q 036427 145 KKVLILMS-DTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 145 mKIL~~~~-~~GgGh~~~~l~La~~L~~~ 172 (536)
||||++.- .+++=...+...+++.|.+.
T Consensus 1 ~~vLvTGF~PF~~~~~NpS~~~v~~L~~~ 29 (194)
T cd00501 1 KKVLVTGFGPFGGEPVNPSWEAVKELPKL 29 (194)
T ss_pred CEEEEEecCCCCCCCCChHHHHHHhcccc
Confidence 67777753 35444567777778877654
No 369
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=23.58 E-value=1.9e+02 Score=32.63 Aligned_cols=31 Identities=16% Similarity=0.046 Sum_probs=17.9
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEE
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVF 180 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~ 180 (536)
++.||||++.. . | .-...|++.|.++ +++|.
T Consensus 378 ~~~mkiLVtGa-~--G--~iG~~l~~~L~~~---g~~v~ 408 (668)
T PLN02260 378 KPSLKFLIYGR-T--G--WIGGLLGKLCEKQ---GIAYE 408 (668)
T ss_pred CCCceEEEECC-C--c--hHHHHHHHHHHhC---CCeEE
Confidence 45578877642 2 1 2333466778777 66663
No 370
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=23.42 E-value=9.6e+02 Score=25.92 Aligned_cols=79 Identities=14% Similarity=0.132 Sum_probs=46.5
Q ss_pred CEEEecChhhHHHHHhhc--CeEEEC----CC-hHHHHHHHHh---CCcEEEeccCCccccCChhhHhhCCceeec-C--
Q 036427 410 PVQVKGFVSKMEEAMGAC--DCIITK----AG-PGTIAEAMIR---GLPIILNDFIAGQEAGNVPYVVENGCGKFS-K-- 476 (536)
Q Consensus 410 ~V~~~G~v~~l~~ll~~a--Dv~V~~----sG-~~tllEAma~---GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~-- 476 (536)
+|.......+..+.+... |++++- .. |..+++.+.. ++|||++-..++.+. +-...+.|.--++ .
T Consensus 30 ~v~~a~~~~~al~~i~~~~~~lvl~Di~mp~~~Gl~ll~~i~~~~~~~pVI~~Tg~g~i~~--AV~A~k~GA~Dfl~KP~ 107 (464)
T COG2204 30 EVVTAESAEEALEALSESPFDLVLLDIRMPGMDGLELLKEIKSRDPDLPVIVMTGHGDIDT--AVEALRLGAFDFLEKPF 107 (464)
T ss_pred eEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCCEEEEeCCCCHHH--HHHHHhcCcceeeeCCC
Confidence 344444333444444333 555543 22 6777775555 699999886555442 3334455554333 2
Q ss_pred CHHHHHHHHHHHhC
Q 036427 477 SPKEIANMVSQWFG 490 (536)
Q Consensus 477 d~~~La~~I~~ll~ 490 (536)
+++.|...+++.++
T Consensus 108 ~~~~L~~~v~ral~ 121 (464)
T COG2204 108 DLDRLLAIVERALE 121 (464)
T ss_pred CHHHHHHHHHHHHH
Confidence 89999999998887
No 371
>PRK11670 antiporter inner membrane protein; Provisional
Probab=23.32 E-value=1.9e+02 Score=30.18 Aligned_cols=42 Identities=19% Similarity=0.194 Sum_probs=31.7
Q ss_pred CCCceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 142 DQPKKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 142 ~~~mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
..++||.-++++ -|-|-...+..||.+|.+. |..|.++|...
T Consensus 104 ~~~~~vIaV~S~KGGVGKTT~avNLA~aLA~~---G~rVlLID~D~ 146 (369)
T PRK11670 104 NGVKNIIAVSSGKGGVGKSSTAVNLALALAAE---GAKVGILDADI 146 (369)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHHHHHC---CCcEEEEeCCC
Confidence 334565555544 4459999999999999998 88999998644
No 372
>PRK00005 fmt methionyl-tRNA formyltransferase; Reviewed
Probab=23.29 E-value=4.8e+02 Score=26.35 Aligned_cols=19 Identities=26% Similarity=0.328 Sum_probs=14.6
Q ss_pred HHHHHHHhhCCCEEEEcCc
Q 036427 237 EVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~~ 255 (536)
.+.+.+++.+||++++.+.
T Consensus 69 ~~~~~l~~~~~Dliv~~~~ 87 (309)
T PRK00005 69 EFLAELAALNADVIVVVAY 87 (309)
T ss_pred HHHHHHHhcCcCEEEEehh
Confidence 4456688999999998653
No 373
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=23.23 E-value=4.8e+02 Score=23.06 Aligned_cols=40 Identities=13% Similarity=0.221 Sum_probs=24.8
Q ss_pred CEEEecCh-hhHHHHHhhcCeEEECCC-h-HHHHHHHHhCCcE
Q 036427 410 PVQVKGFV-SKMEEAMGACDCIITKAG-P-GTIAEAMIRGLPI 449 (536)
Q Consensus 410 ~V~~~G~v-~~l~~ll~~aDv~V~~sG-~-~tllEAma~GlPV 449 (536)
.|+..... .++.+..+.||++|+..| + ..--|-+.-|.=|
T Consensus 54 tV~~~~~~t~~l~~~v~~ADIVvsAtg~~~~i~~~~ikpGa~V 96 (140)
T cd05212 54 TVYSCDWKTIQLQSKVHDADVVVVGSPKPEKVPTEWIKPGATV 96 (140)
T ss_pred EEEEeCCCCcCHHHHHhhCCEEEEecCCCCccCHHHcCCCCEE
Confidence 45555433 378889999999999887 3 2223444445333
No 374
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=23.12 E-value=4.7e+02 Score=27.63 Aligned_cols=133 Identities=15% Similarity=0.127 Sum_probs=0.0
Q ss_pred CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEE-EEEecCCHHHHHHHHcCCCCCCEEEecChh-------h
Q 036427 348 EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQV-LVICGRNKKLANKLLSTDWKIPVQVKGFVS-------K 419 (536)
Q Consensus 348 ~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~-lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~-------~ 419 (536)
..+++++.+.|+.+.-...++++.|.+ .+..+ +++.-...+......-..+..+-.+....+ +
T Consensus 5 ~~k~IllgvTGsiaa~k~~~lv~~L~~---------~g~~V~vv~T~~A~~fi~~~~l~~l~~~~V~~~~~~~~~~~~~~ 75 (399)
T PRK05579 5 AGKRIVLGVSGGIAAYKALELVRRLRK---------AGADVRVVMTEAAKKFVTPLTFQALSGNPVSTDLWDPAAEAAMG 75 (399)
T ss_pred CCCeEEEEEeCHHHHHHHHHHHHHHHh---------CCCEEEEEECHhHHHHHhHHHHHHhhCCceEccccccccCCCcc
Q ss_pred HHHHHhhcCeEEECC-----------C---hHHHHHHHHhCCcEEEec------cCCccccCChhhHhhCCceeecC---
Q 036427 420 MEEAMGACDCIITKA-----------G---PGTIAEAMIRGLPIILND------FIAGQEAGNVPYVVENGCGKFSK--- 476 (536)
Q Consensus 420 l~~ll~~aDv~V~~s-----------G---~~tllEAma~GlPVI~~~------~~~~~e~~na~~lv~~g~g~~~~--- 476 (536)
--++...+|++|..+ | .....=++++++|+|+.| ........|...|.+.|..++-+
T Consensus 76 hi~l~~~aD~~vVaPaTaNtlaKiA~GiaDnllt~~~la~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~~g 155 (399)
T PRK05579 76 HIELAKWADLVLIAPATADLIAKLAHGIADDLLTTTLLATTAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPASG 155 (399)
T ss_pred hhhcccccCEEEEeeCCHHHHHHHHcccCCcHHHHHHHhcCCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCCCc
Q ss_pred -------------CHHHHHHHHHHHh
Q 036427 477 -------------SPKEIANMVSQWF 489 (536)
Q Consensus 477 -------------d~~~La~~I~~ll 489 (536)
+++++...+.+.+
T Consensus 156 ~la~~~~g~gr~~~~~~I~~~~~~~~ 181 (399)
T PRK05579 156 RLACGDVGPGRMAEPEEIVAAAERAL 181 (399)
T ss_pred cccCCCcCCCCCCCHHHHHHHHHHHh
No 375
>TIGR01754 flav_RNR ribonucleotide reductase-associated flavodoxin, putative. This model represents a family of proteins found immediately downstream of ribonucleotide reductase genes in Xyella fastidiosa and some Gram-positive bacteria. It appears to be a highly divergent flavodoxin of the short chain type, more like the flavodoxins of the sulfate-reducing genus Desulfovibrio than like the NifF flavodoxins associated with nitrogen fixation.
Probab=23.07 E-value=1.3e+02 Score=26.32 Aligned_cols=33 Identities=15% Similarity=0.171 Sum_probs=24.1
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEE
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVF 180 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~ 180 (536)
|||+|+-...-|-....|..|++.|... +++|.
T Consensus 1 M~i~IiY~S~tGnTe~iA~~ia~~l~~~---g~~v~ 33 (140)
T TIGR01754 1 MRILLAYLSLSGNTEEVAFMIQDYLQKD---GHEVD 33 (140)
T ss_pred CeEEEEEECCCChHHHHHHHHHHHHhhC---CeeEE
Confidence 6888876555356677788899999876 66664
No 376
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=22.98 E-value=1.5e+02 Score=27.43 Aligned_cols=34 Identities=24% Similarity=0.332 Sum_probs=24.2
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
|+||++.++|- .|.. .+..+.+.|++. |++|.++
T Consensus 1 ~k~Ill~vtGs-iaa~-~~~~li~~L~~~---g~~V~vv 34 (182)
T PRK07313 1 MKNILLAVSGS-IAAY-KAADLTSQLTKR---GYQVTVL 34 (182)
T ss_pred CCEEEEEEeCh-HHHH-HHHHHHHHHHHC---CCEEEEE
Confidence 47888887664 3444 478899999987 6676544
No 377
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=22.98 E-value=1.5e+02 Score=29.04 Aligned_cols=38 Identities=13% Similarity=0.165 Sum_probs=30.7
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|+|.+. +.-|=|-.+.+..||.+|.++ |..|+++|...
T Consensus 1 ~~i~~~-gKGGVGKTT~~~nLA~~La~~---g~rVLliD~D~ 38 (268)
T TIGR01281 1 MILAVY-GKGGIGKSTTSSNLSVAFAKL---GKRVLQIGCDP 38 (268)
T ss_pred CEEEEE-cCCcCcHHHHHHHHHHHHHhC---CCeEEEEecCc
Confidence 677777 444448889999999999998 88999998754
No 378
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2. This enzyme is an alternative to PurN (TIGR00639)
Probab=22.90 E-value=3.1e+02 Score=28.32 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=21.0
Q ss_pred eEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 146 KIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
||+|+.++. ....++.++++. |++|++++...
T Consensus 1 kililG~g~------~~~~l~~aa~~~---G~~v~~~d~~~ 32 (380)
T TIGR01142 1 RVLLLGSGE------LGKEVAIEAQRL---GVEVIAVDRYA 32 (380)
T ss_pred CEEEECCCH------HHHHHHHHHHHc---CCEEEEEeCCC
Confidence 466664432 244556778888 88999887644
No 379
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=22.83 E-value=96 Score=32.05 Aligned_cols=77 Identities=16% Similarity=0.097 Sum_probs=42.5
Q ss_pred HHHHHhhcCeEEEC--C---C--hHHHHHHHHhC-CcEEEeccCCccccCChhhHhhCCceeec---CCHHHHHHHHHHH
Q 036427 420 MEEAMGACDCIITK--A---G--PGTIAEAMIRG-LPIILNDFIAGQEAGNVPYVVENGCGKFS---KSPKEIANMVSQW 488 (536)
Q Consensus 420 l~~ll~~aDv~V~~--s---G--~~tllEAma~G-lPVI~~~~~~~~e~~na~~lv~~g~g~~~---~d~~~La~~I~~l 488 (536)
..++++....++.- + + .-.+.+|+..| +||+..+... +...++..+.-+-+ +++++|++.|..+
T Consensus 221 ~~~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~-----~~~~~~P~~SfI~~~df~s~~~La~yl~~l 295 (349)
T PF00852_consen 221 KLELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRP-----NYEEFAPPNSFIHVDDFKSPKELADYLKYL 295 (349)
T ss_dssp HHHHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---T-----THHHHS-GGGSEEGGGSSSHHHHHHHHHHH
T ss_pred ccccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEec-----ccccCCCCCCccchhcCCCHHHHHHHHHHH
Confidence 44555555444432 2 2 35788999999 5666653222 33335554444433 3899999999999
Q ss_pred hCCCHHHHHHHHHH
Q 036427 489 FGPKIDELKAMSQN 502 (536)
Q Consensus 489 l~~d~~~~~~m~~~ 502 (536)
-+ |++...+.-+.
T Consensus 296 ~~-n~~~Y~~yf~W 308 (349)
T PF00852_consen 296 DK-NDELYNKYFEW 308 (349)
T ss_dssp HT--HHHHH-----
T ss_pred hc-CHHHHhhhccc
Confidence 99 88877655543
No 380
>PRK13530 arsenate reductase; Provisional
Probab=22.80 E-value=1.5e+02 Score=25.89 Aligned_cols=25 Identities=16% Similarity=0.174 Sum_probs=15.2
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHH
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAA 168 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~ 168 (536)
+++||||+|.+- ..-...|.+|++.
T Consensus 2 ~~~~vLFvC~~N-~cRS~mAEal~~~ 26 (133)
T PRK13530 2 NKKTIYFLCTGN-SCRSQMAEGWGKQ 26 (133)
T ss_pred CCCEEEEEcCCc-hhHHHHHHHHHHH
Confidence 468999999764 2444444444443
No 381
>PLN00016 RNA-binding protein; Provisional
Probab=22.74 E-value=79 Score=32.84 Aligned_cols=40 Identities=23% Similarity=0.217 Sum_probs=27.5
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
.++||||++.... ||.......|++.|.++ |++|++++..
T Consensus 50 ~~~~~VLVt~~~~-GatG~iG~~lv~~L~~~---G~~V~~l~R~ 89 (378)
T PLN00016 50 VEKKKVLIVNTNS-GGHAFIGFYLAKELVKA---GHEVTLFTRG 89 (378)
T ss_pred cccceEEEEeccC-CCceeEhHHHHHHHHHC---CCEEEEEecC
Confidence 3447888774443 45556666788899888 7899887653
No 382
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=22.70 E-value=4.1e+02 Score=27.30 Aligned_cols=28 Identities=21% Similarity=0.415 Sum_probs=21.6
Q ss_pred cCeEEECCChH---HHHHHHHhCCcEEEecc
Q 036427 427 CDCIITKAGPG---TIAEAMIRGLPIILNDF 454 (536)
Q Consensus 427 aDv~V~~sG~~---tllEAma~GlPVI~~~~ 454 (536)
-|+++..+|.. .++-|..+|+|++....
T Consensus 92 Pdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~ 122 (352)
T PRK12446 92 PDVIFSKGGFVSVPVVIGGWLNRVPVLLHES 122 (352)
T ss_pred CCEEEecCchhhHHHHHHHHHcCCCEEEECC
Confidence 47888776633 47899999999998654
No 383
>cd07354 HN_L-delphilin-R1_like First harmonin_N_like domain (repeat 1) of L-delphilin, and related domains. This subgroup contains the first of two harmonin_N_like domains of an alternatively spliced longer variant of mouse delphilin (L-delphilin, isoform 1), and related domains. Delphilin is a scaffold protein which binds the glutamate receptor delta-2 (GRID2) subunit and the monocarboxylate transporter 2 at the cerebellar parallel fiber-Purkinje cell synapses. The N-terminus of L-delphilin contains this harmonin_N_like domain preceded by a postsynaptic density-95/discs-large/ZO-1 (PDZ) protein-binding domain, PDZ1. L-delphilin, in common with the shorter C-terminal isoforms (S-delphilin/delphilin alpha and delphilin beta) has a second harmonin_N_like domain (not belonging to this subgroup) and a second PDZ domain, PDZ2. This first harmonin_N_like domain is a putative protein-binding module based on its sequence similarity to the harmonin N-domain.
Probab=22.69 E-value=3e+02 Score=21.88 Aligned_cols=46 Identities=17% Similarity=0.132 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 036427 479 KEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 479 ~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~ 524 (536)
.++..++..+|..+|+..+..-+.-++++.+...+..+..+..++.
T Consensus 6 ~eF~~Kvd~iL~~dp~~Ke~l~~aLk~Ya~~k~vd~l~~aL~~~L~ 51 (80)
T cd07354 6 QEFSRKVDAILGDDPVKKEQVFAALKQYAADKNVDCLVWALCGLLQ 51 (80)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHhC
Confidence 4677788888886777778887878888888777777777765553
No 384
>COG1611 Predicted Rossmann fold nucleotide-binding protein [General function prediction only]
Probab=22.46 E-value=5.8e+02 Score=24.16 Aligned_cols=41 Identities=22% Similarity=0.331 Sum_probs=27.2
Q ss_pred EEEecChhhHHHHHhhcCeEEE-CCChHHH---HHHHHhCC-cEEE
Q 036427 411 VQVKGFVSKMEEAMGACDCIIT-KAGPGTI---AEAMIRGL-PIIL 451 (536)
Q Consensus 411 V~~~G~v~~l~~ll~~aDv~V~-~sG~~tl---lEAma~Gl-PVI~ 451 (536)
+++.++...-..+...||++|. |+|.+|+ +|++..+. |+..
T Consensus 95 ~~~~~~~~Rk~~~~~~ada~V~~pGG~GTleEl~e~lt~~q~g~~~ 140 (205)
T COG1611 95 ITGMDFAERKRAMVRSADAFIVLPGGFGTLEELFEALTLGQTGVHA 140 (205)
T ss_pred eecCCHHHHHHHHHHhCCEEEEeCCCcchHHHHHHHHHHhhCCccc
Confidence 3334444456778899998766 5556776 45788887 7664
No 385
>TIGR03282 methan_mark_13 putative methanogenesis marker 13 metalloprotein. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. This metal cluster-binding family is related to nitrogenase structural protein NifD and accessory protein NifE, among others.
Probab=22.37 E-value=3.8e+02 Score=27.61 Aligned_cols=82 Identities=16% Similarity=0.176 Sum_probs=44.0
Q ss_pred HHHHHHHhCCcEEEeccCCcccc--CC----hhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC--
Q 036427 438 TIAEAMIRGLPIILNDFIAGQEA--GN----VPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARP-- 509 (536)
Q Consensus 438 tllEAma~GlPVI~~~~~~~~e~--~n----a~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~-- 509 (536)
.+-|+ ..|+|||..+..++... .. ...+.+.| +-+.+++.+.-+.|.. .-+.-+.-+.+.+++.++
T Consensus 97 VvkE~-~~giPVI~V~t~GGfGdn~~G~~~aLeAiidq~----~i~~~e~~rq~~~l~~-at~~ek~~g~a~~~yi~p~~ 170 (352)
T TIGR03282 97 AVDEA-DVDAEVIAVEVHAGFGDNTEGVIATLESAAEAG----IIDEDEVERQKELLKK-ATEVEKKRGMAKREYIEPSY 170 (352)
T ss_pred HHHHh-CCCCCEEEEECCCCCccHHHHHHHHHHHHHHhC----CcCHHHHHHHHHHHHH-HHHHHHHhchhhccccCCCC
Confidence 33343 67999999988443211 00 11122222 1166666666544443 333333444444555544
Q ss_pred -chHHHHHHHHHHHHhh
Q 036427 510 -DAVFRIVQDLHELVRQ 525 (536)
Q Consensus 510 -~~~~~i~~~i~~l~~~ 525 (536)
+...++++.+.+++++
T Consensus 171 ~d~~~~~~~~l~~~~~~ 187 (352)
T TIGR03282 171 GDDKHKVAKRLVDLIQE 187 (352)
T ss_pred CccHHHHHHHHHHHHhc
Confidence 5677889999888754
No 386
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=22.33 E-value=3.1e+02 Score=27.94 Aligned_cols=40 Identities=13% Similarity=0.300 Sum_probs=27.8
Q ss_pred CCce-EEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEee
Q 036427 143 QPKK-VLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTD 183 (536)
Q Consensus 143 ~~mK-IL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~ 183 (536)
...+ ..++++.+|.|-.+...++...+.+..+ .|.+.+=|
T Consensus 122 ~~~~GLILVTGpTGSGKSTTlAamId~iN~~~~-~HIlTIED 162 (353)
T COG2805 122 ESPRGLILVTGPTGSGKSTTLAAMIDYINKHKA-KHILTIED 162 (353)
T ss_pred hCCCceEEEeCCCCCcHHHHHHHHHHHHhccCC-cceEEecC
Confidence 3344 4445677999999999999999998743 34445544
No 387
>KOG4180 consensus Predicted kinase [General function prediction only]
Probab=22.31 E-value=71 Score=32.35 Aligned_cols=55 Identities=16% Similarity=0.169 Sum_probs=37.6
Q ss_pred HHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHH----hCCcEEEeccC
Q 036427 398 LANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMI----RGLPIILNDFI 455 (536)
Q Consensus 398 l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma----~GlPVI~~~~~ 455 (536)
+.+.+.+.++..++.+ ..++...+..||++|.-+|-+|++-|.. --+|||.++..
T Consensus 80 ~~~~l~k~giesklv~---R~~lsq~i~waD~VisvGGDGTfL~Aasrv~~~~~PViGvNtD 138 (395)
T KOG4180|consen 80 CQEELSKAGIESKLVS---RNDLSQPIRWADMVISVGGDGTFLLAASRVIDDSKPVIGVNTD 138 (395)
T ss_pred HHHHHhhCCcceeeee---hhhccCcCchhhEEEEecCccceeehhhhhhccCCceeeecCC
Confidence 3445555565544443 3455566999999999888778865554 35999998864
No 388
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=22.28 E-value=7.2e+02 Score=26.55 Aligned_cols=38 Identities=11% Similarity=0.268 Sum_probs=30.9
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
.+|..+++-.|-|-.+.+..||..|.++ |..|.+++..
T Consensus 100 ~~vi~lvG~~GvGKTTtaaKLA~~l~~~---G~kV~lV~~D 137 (429)
T TIGR01425 100 QNVIMFVGLQGSGKTTTCTKLAYYYQRK---GFKPCLVCAD 137 (429)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHC---CCCEEEEcCc
Confidence 4677777777789999999999999987 7788877653
No 389
>TIGR01283 nifE nitrogenase molybdenum-iron cofactor biosynthesis protein NifE. This protein is part of the NifEN complex involved in biosynthesis of the molybdenum-iron cofactor used by the homologous NifDK complex of nitrogenase. In a few species, the protein is found as a NifEN fusion protein.
Probab=22.16 E-value=8.5e+02 Score=26.04 Aligned_cols=98 Identities=18% Similarity=0.201 Sum_probs=0.0
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
..+|+.+.+.+. ....+++.|.+. |.+|..+.. ....+..+..+.+..+-...........
T Consensus 325 ~Gkrv~i~~g~~------~~~~l~~~l~el---Gmevv~~~t--------~~~~~~d~~~l~~~~~~~~~v~~~~d~~-- 385 (456)
T TIGR01283 325 KGKKAAIYTGGV------KSWSLVSALQDL---GMEVVATGT--------QKGTEEDYARIRELMGEGTVMLDDANPR-- 385 (456)
T ss_pred CCCEEEEEcCCc------hHHHHHHHHHHC---CCEEEEEee--------ecCCHHHHHHHHHHcCCCeEEEeCCCHH--
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD 282 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d 282 (536)
.+.+.+++.+||+++.... .-.++++.| +|++.+..+
T Consensus 386 --------------e~~~~i~~~~pDl~ig~~~-----~~~~a~k~g----iP~i~~~~~ 422 (456)
T TIGR01283 386 --------------ELLKLLLEYKADLLIAGGK-----ERYTALKLG----IPFCDINHE 422 (456)
T ss_pred --------------HHHHHHhhcCCCEEEEccc-----hHHHHHhcC----CCEEEcccc
No 390
>cd01408 SIRT1 SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The nuclear SIRT1 has been shown to target the p53 tumor suppressor protein for deacetylation to suppress DNA damage, and the cytoplasmic SIRT2 homolog has been shown to target alpha-tubulin for deacetylation for the maintenance of cell integrity.
Probab=22.14 E-value=1.2e+02 Score=29.44 Aligned_cols=48 Identities=21% Similarity=0.198 Sum_probs=31.4
Q ss_pred CCCEEEecCh------hhHHHHHhhcCeEEEC--C---C-hHHHHHHHHhCCcEEEeccC
Q 036427 408 KIPVQVKGFV------SKMEEAMGACDCIITK--A---G-PGTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 408 ~~~V~~~G~v------~~l~~ll~~aDv~V~~--s---G-~~tllEAma~GlPVI~~~~~ 455 (536)
.++|.+.|.. ....+.+..||++++- | . ...+.+.+..|.|+|.++..
T Consensus 151 rP~Vv~FGE~lp~~~~~~~~~~~~~aDlllvvGTSl~V~pa~~l~~~~~~~~~~v~iN~~ 210 (235)
T cd01408 151 KPDIVFFGESLPSRFFSHMEEDKEEADLLIVIGTSLKVAPFASLPSRVPSEVPRVLINRE 210 (235)
T ss_pred cCcEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCeeccHHHHHHHHhCCCcEEEEeCC
Confidence 4566666652 2344667789986653 2 1 34456777789999998864
No 391
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=22.06 E-value=1.6e+02 Score=28.60 Aligned_cols=38 Identities=18% Similarity=0.306 Sum_probs=29.6
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
++|.|. ..=|-|-.+.+..||.+|.++ |..|.++|...
T Consensus 2 ~~iav~-~KGGvGKTT~~~nLA~~La~~---G~kVlliD~Dp 39 (270)
T cd02040 2 RQIAIY-GKGGIGKSTTTQNLSAALAEM---GKKVMIVGCDP 39 (270)
T ss_pred cEEEEE-eCCcCCHHHHHHHHHHHHHhC---CCeEEEEEcCC
Confidence 346665 444448889999999999998 88999998754
No 392
>PRK14982 acyl-ACP reductase; Provisional
Probab=22.04 E-value=6.5e+02 Score=25.97 Aligned_cols=38 Identities=21% Similarity=0.184 Sum_probs=29.0
Q ss_pred hhHHHHHhhcCeEEECCC-hHH-HHHHHHhCCcEEEeccC
Q 036427 418 SKMEEAMGACDCIITKAG-PGT-IAEAMIRGLPIILNDFI 455 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~~sG-~~t-llEAma~GlPVI~~~~~ 455 (536)
.++.+.+..+|++|+.++ +.. ++++.....|.+++|..
T Consensus 207 ~~l~~~l~~aDiVv~~ts~~~~~~I~~~~l~~~~~viDiA 246 (340)
T PRK14982 207 LSLEEALPEADIVVWVASMPKGVEIDPETLKKPCLMIDGG 246 (340)
T ss_pred HhHHHHHccCCEEEECCcCCcCCcCCHHHhCCCeEEEEec
Confidence 467789999999998875 333 36666668999999864
No 393
>PRK13556 azoreductase; Provisional
Probab=21.94 E-value=1.5e+02 Score=28.02 Aligned_cols=43 Identities=23% Similarity=0.252 Sum_probs=27.3
Q ss_pred CceEEEEeCCC-C--chH-HHHHHHHHHHHHhccCCceEEEEeecccc
Q 036427 144 PKKVLILMSDT-G--GGH-RASAEAIKAAFHEKFGNEYQVFVTDLWSD 187 (536)
Q Consensus 144 ~mKIL~~~~~~-G--gGh-~~~~l~La~~L~~~~g~g~eV~v~~~~~~ 187 (536)
|||||++.+.. . ++. ..-+..+++.+.+.++ +++|.+.|+...
T Consensus 1 m~kiL~I~~spr~~~~S~s~~l~~~~~~~~~~~~~-~~~V~~~DL~~~ 47 (208)
T PRK13556 1 MSKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHP-NDTVVELDLYKE 47 (208)
T ss_pred CCeEEEEeCCCCCCCCcHHHHHHHHHHHHHHHhCC-CCeEEEEeCCCC
Confidence 57999887543 1 222 2234456667777644 689999998654
No 394
>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism]
Probab=21.90 E-value=9e+02 Score=25.03 Aligned_cols=37 Identities=27% Similarity=0.265 Sum_probs=29.5
Q ss_pred CCceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 143 QPKKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 143 ~~mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
+++||+++++| --.|-......+.+.+... +.+|+-+
T Consensus 1 ~~kkIaIlTSGGdaPGmNa~Iravvr~a~~~---g~eV~Gi 38 (347)
T COG0205 1 MMKKIAILTSGGDAPGMNAVIRAVVRTAIKE---GLEVFGI 38 (347)
T ss_pred CCceEEEEccCCCCccHHHHHHHHHHHHHHc---CCEEEEE
Confidence 46899999865 3367788888999999988 8888765
No 395
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=21.84 E-value=8.4e+02 Score=24.67 Aligned_cols=54 Identities=20% Similarity=0.179 Sum_probs=33.8
Q ss_pred HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC-------------C-hHHHHHHHHhCCcEEEec
Q 036427 397 KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA-------------G-PGTIAEAMIRGLPIILND 453 (536)
Q Consensus 397 ~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s-------------G-~~tllEAma~GlPVI~~~ 453 (536)
...+.+.+.++ +++++.- .-+..+|..+|.+++.+ | ....+=|-.+++|+++.-
T Consensus 162 ~~a~~L~~~GI--~vtlI~D-sav~~~m~~vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~a 229 (310)
T PRK08535 162 ITAKELAEYGI--PVTLIVD-SAVRYFMKDVDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMVAA 229 (310)
T ss_pred HHHHHHHHCCC--CEEEEeh-hHHHHHHHhCCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEec
Confidence 34556666554 4444332 35677889999988763 3 233344667899999864
No 396
>PRK10342 glycerate kinase I; Provisional
Probab=21.76 E-value=3.9e+02 Score=28.06 Aligned_cols=55 Identities=24% Similarity=0.242 Sum_probs=35.4
Q ss_pred hhHHHHHhhcCeEEECC---------C--hHHH-HHHHHhCCcEEEeccCCccccCChhhHhhCCceeec
Q 036427 418 SKMEEAMGACDCIITKA---------G--PGTI-AEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS 475 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~~s---------G--~~tl-lEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~ 475 (536)
-++++.++.||++|+.= | |.-+ --|..+|+|||++--.- ..+...+.+.|...++
T Consensus 276 ~~l~~~l~~ADLVITGEG~~D~QTl~GK~p~gVa~~A~~~~vPviai~G~~---~~~~~~~~~~g~~av~ 342 (381)
T PRK10342 276 LNLEEHIHDCTLVITGEGRIDSQSIHGKVPIGVANVAKKYHKPVIGIAGSL---TDDVGVVHQHGIDAVF 342 (381)
T ss_pred cCHHHHhccCCEEEECCCcCcccccCCccHHHHHHHHHHhCCCEEEEeccc---CCChHHHHhcCceEEE
Confidence 37889999999999862 3 3333 44788999999976321 1122335566654433
No 397
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=21.75 E-value=1.6e+02 Score=28.92 Aligned_cols=38 Identities=24% Similarity=0.264 Sum_probs=30.1
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
++|.|. ..-|=|-.+.+..||.+|.++ |..|.++|...
T Consensus 2 ~~iav~-~KGGVGKTT~~~nLA~~La~~---G~rVLlID~Dp 39 (274)
T PRK13235 2 RKVAIY-GKGGIGKSTTTQNTVAGLAEM---GKKVMVVGCDP 39 (274)
T ss_pred CEEEEe-CCCCccHHHHHHHHHHHHHHC---CCcEEEEecCC
Confidence 456666 544448888999999999998 88999998754
No 398
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=21.63 E-value=1.9e+02 Score=32.13 Aligned_cols=51 Identities=25% Similarity=0.335 Sum_probs=39.7
Q ss_pred hcCeEEECCChHHHHHHHHh----CCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 426 ACDCIITKAGPGTIAEAMIR----GLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 426 ~aDv~V~~sG~~tllEAma~----GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
.+|++|+-+|-+|++.|+.. ++|++.++.+ ..|++.+ +++++.+.++++++
T Consensus 348 ~~dlvi~lGGDGT~L~aa~~~~~~~~PilGin~G--------------~lGFL~~~~~~~~~~~l~~~~~ 403 (569)
T PRK14076 348 EISHIISIGGDGTVLRASKLVNGEEIPIICINMG--------------TVGFLTEFSKEEIFKAIDSIIS 403 (569)
T ss_pred CCCEEEEECCcHHHHHHHHHhcCCCCCEEEEcCC--------------CCCcCcccCHHHHHHHHHHHHc
Confidence 57999999888888887663 7899998742 2455554 78899999999987
No 399
>COG0132 BioD Dethiobiotin synthetase [Coenzyme metabolism]
Probab=21.47 E-value=1.9e+02 Score=27.95 Aligned_cols=36 Identities=25% Similarity=0.314 Sum_probs=28.0
Q ss_pred CceEEEE-eCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 144 PKKVLIL-MSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 144 ~mKIL~~-~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
|||.+|+ ..+||=|-......|+++|+++ |+.+...
T Consensus 1 m~~~~fVtGTDT~VGKTv~S~aL~~~l~~~---g~~~~~~ 37 (223)
T COG0132 1 MMKRFFVTGTDTGVGKTVVSAALAQALKQQ---GYSVAGY 37 (223)
T ss_pred CCceEEEEeCCCCccHHHHHHHHHHHHHhC---CCeeEEE
Confidence 3455555 4678779999999999999998 8887654
No 400
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=21.43 E-value=1.7e+02 Score=29.22 Aligned_cols=51 Identities=25% Similarity=0.360 Sum_probs=36.7
Q ss_pred hcCeEEECCChHHHHHHHH---hCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 426 ACDCIITKAGPGTIAEAMI---RGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 426 ~aDv~V~~sG~~tllEAma---~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
.+|++|+-+|-+|+++|.. .++|++.++.+. .|++.. +++++.++++++++
T Consensus 57 ~~d~vi~iGGDGTlL~a~~~~~~~~pi~gIn~G~--------------lGFl~~~~~~~~~~~l~~i~~ 111 (277)
T PRK03708 57 DVDFIIAIGGDGTILRIEHKTKKDIPILGINMGT--------------LGFLTEVEPEETFFALSRLLE 111 (277)
T ss_pred CCCEEEEEeCcHHHHHHHHhcCCCCeEEEEeCCC--------------CCccccCCHHHHHHHHHHHHc
Confidence 5799999888888888774 356888877421 233332 68888888988887
No 401
>PRK10867 signal recognition particle protein; Provisional
Probab=21.42 E-value=7.7e+02 Score=26.37 Aligned_cols=40 Identities=18% Similarity=0.323 Sum_probs=31.1
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
+.+|.++++..|.|-.+.+..||..|.++. |..|.+++..
T Consensus 99 ~p~vI~~vG~~GsGKTTtaakLA~~l~~~~--G~kV~lV~~D 138 (433)
T PRK10867 99 PPTVIMMVGLQGAGKTTTAGKLAKYLKKKK--KKKVLLVAAD 138 (433)
T ss_pred CCEEEEEECCCCCcHHHHHHHHHHHHHHhc--CCcEEEEEcc
Confidence 357777777788899999999999998762 5678777653
No 402
>PF01745 IPT: Isopentenyl transferase; InterPro: IPR002648 Isopentenyl transferase / dimethylallyl transferase synthesizes isopentenyladensosine 5'-monophosphate, a cytokinin that induces shoot formation on host plants infected with the Ti plasmid [].; GO: 0004161 dimethylallyltranstransferase activity, 0009058 biosynthetic process; PDB: 2ZE8_C 2ZE5_A 2ZE7_A 2ZE6_A.
Probab=21.42 E-value=1.7e+02 Score=28.15 Aligned_cols=34 Identities=29% Similarity=0.301 Sum_probs=25.0
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
|||.++.+.+|.|-...+..||+.+ |..|++.|.
T Consensus 1 M~v~~i~GpT~tGKt~~ai~lA~~~------g~pvI~~Dr 34 (233)
T PF01745_consen 1 MKVYLIVGPTGTGKTALAIALAQKT------GAPVISLDR 34 (233)
T ss_dssp -EEEEEE-STTSSHHHHHHHHHHHH--------EEEEE-S
T ss_pred CcEEEEECCCCCChhHHHHHHHHHh------CCCEEEecc
Confidence 7899999888889999999888877 567888764
No 403
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=21.40 E-value=1.8e+02 Score=28.75 Aligned_cols=38 Identities=24% Similarity=0.246 Sum_probs=29.8
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
++|.|. +.-|=|-...+..||.+|.++ |..|+++|...
T Consensus 2 ~~i~~~-gKGGVGKTT~a~nLA~~La~~---G~rVLliD~Dp 39 (279)
T PRK13230 2 RKFCFY-GKGGIGKSTTVCNIAAALAES---GKKVLVVGCDP 39 (279)
T ss_pred cEEEEE-CCCCCcHHHHHHHHHHHHHhC---CCEEEEEeeCC
Confidence 455555 444458899999999999998 88999998754
No 404
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=21.39 E-value=1.4e+02 Score=25.76 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=19.8
Q ss_pred ceEEEEeCCCC----chHHHHHHHHHHHHHhccCCceEEEEee
Q 036427 145 KKVLILMSDTG----GGHRASAEAIKAAFHEKFGNEYQVFVTD 183 (536)
Q Consensus 145 mKIL~~~~~~G----gGh~~~~l~La~~L~~~~g~g~eV~v~~ 183 (536)
|||+|++.... .+. ...+|+.+..++ ||+|+++.
T Consensus 1 Mki~fvmDpi~~i~~~kD--TT~alm~eAq~R---Ghev~~~~ 38 (119)
T PF02951_consen 1 MKIAFVMDPIESIKPYKD--TTFALMLEAQRR---GHEVFYYE 38 (119)
T ss_dssp -EEEEEES-GGG--TTT---HHHHHHHHHHHT---T-EEEEE-
T ss_pred CeEEEEeCCHHHCCCCCC--hHHHHHHHHHHC---CCEEEEEE
Confidence 79999986531 222 334456777777 89998774
No 405
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=21.39 E-value=3.2e+02 Score=26.75 Aligned_cols=51 Identities=14% Similarity=0.285 Sum_probs=34.1
Q ss_pred CCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCCCcccccccccCCEEEEcCHHHHHH
Q 036427 247 PDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLSTCHPTWFHKLVTRCYCPTADVAKR 308 (536)
Q Consensus 247 PDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~~~~~~~~~~~d~vi~~S~~~~~~ 308 (536)
||+++...|.....+..-+++.| ||++.++. +-. ...+|.++-...+..+.
T Consensus 157 Pd~l~ViDp~~e~iAv~EA~klg----IPVvAlvDTn~d-------pd~VD~~IP~Ndda~rs 208 (252)
T COG0052 157 PDVLFVIDPRKEKIAVKEANKLG----IPVVALVDTNCD-------PDGVDYVIPGNDDAIRS 208 (252)
T ss_pred CCEEEEeCCcHhHHHHHHHHHcC----CCEEEEecCCCC-------CccCceeecCCChHHHH
Confidence 99999999988777666677776 99986653 221 24566666555544443
No 406
>PRK09932 glycerate kinase II; Provisional
Probab=21.33 E-value=3.9e+02 Score=28.05 Aligned_cols=55 Identities=22% Similarity=0.219 Sum_probs=35.4
Q ss_pred hhHHHHHhhcCeEEECC---------C--hH-HHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeec
Q 036427 418 SKMEEAMGACDCIITKA---------G--PG-TIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS 475 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~~s---------G--~~-tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~ 475 (536)
-++++.+..||++|+.- | |. +.--|-.+++|||++--.- ..+...+.+.|...++
T Consensus 276 ~~l~~~l~~ADlVITGEG~~D~Qt~~GK~p~~Va~~A~~~~~Pvi~i~G~~---~~~~~~~~~~g~~~~~ 342 (381)
T PRK09932 276 VNLEQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVL---GDGVEVVHQYGIDAVF 342 (381)
T ss_pred cChHHHhccCCEEEECCCcccccccCCccHHHHHHHHHHcCCCEEEEeccc---CCChHHHHhcCceEEE
Confidence 37889999999999862 3 33 3334778899999976321 1123346666654433
No 407
>COG3563 KpsC Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane]
Probab=21.20 E-value=6.6e+02 Score=27.26 Aligned_cols=46 Identities=13% Similarity=0.016 Sum_probs=33.2
Q ss_pred CCCCCEEEecChhhHHHHHhhcCeEEEC-CChHHHHHHHHhCCcEEEec
Q 036427 406 DWKIPVQVKGFVSKMEEAMGACDCIITK-AGPGTIAEAMIRGLPIILND 453 (536)
Q Consensus 406 ~~~~~V~~~G~v~~l~~ll~~aDv~V~~-sG~~tllEAma~GlPVI~~~ 453 (536)
....+++++..-=+.-.++...|=+.+. |+ +=.||+.||+|++...
T Consensus 205 ~~~~r~~ll~edfnpisll~~~dkvy~~ts~--mgfeall~~~~~~~fg 251 (671)
T COG3563 205 SQQHRVHLLAEDFNPISLLQNVDKVYCVTSQ--MGFEALLCGKPLTTFG 251 (671)
T ss_pred ccCceEEEecccCChHHHHHhcceeEEeecc--ccHHHHhcCCceeeec
Confidence 3456787766544667889999965554 44 2389999999999965
No 408
>TIGR00045 glycerate kinase. The only characterized member of this family so far is the glycerate kinase GlxK (EC 2.7.1.31) of E. coli. This enzyme acts after glyoxylate carboligase and 2-hydroxy-3-oxopropionate reductase (tartronate semialdehyde reductase) in the conversion of glyoxylate to 3-phosphoglycerate (the D-glycerate pathway) as a part of allantoin degradation.
Probab=21.20 E-value=3.7e+02 Score=28.16 Aligned_cols=55 Identities=24% Similarity=0.295 Sum_probs=35.2
Q ss_pred hhHHHHHhhcCeEEECC---------C--hHHHH-HHHHhCCcEEEeccCCccccCChhhHhhCCceeec
Q 036427 418 SKMEEAMGACDCIITKA---------G--PGTIA-EAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS 475 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~~s---------G--~~tll-EAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~ 475 (536)
-++++.+..||++|+.- | |.-+. -|-.+|+|||++--.- ..+...+.+.|...++
T Consensus 275 ~~l~~~l~~ADlVITGEG~~D~Qtl~GK~p~~Va~~A~~~~vPviai~G~v---~~~~~~~~~~g~~a~~ 341 (375)
T TIGR00045 275 LDLEQKIKDADLVITGEGRLDRQSLMGKAPVGVAKRAKKYGVPVIAIAGSL---GDGVDVLPQHGIDAAF 341 (375)
T ss_pred hCHHHHhcCCCEEEECCCcccccccCCchHHHHHHHHHHhCCeEEEEeccc---CCChHHHHhcCccEEE
Confidence 37889999999999862 3 33344 4777899999975321 1123345666654433
No 409
>COG1440 CelA Phosphotransferase system cellobiose-specific component IIB [Carbohydrate transport and metabolism]
Probab=21.17 E-value=4.2e+02 Score=22.14 Aligned_cols=45 Identities=18% Similarity=0.381 Sum_probs=29.2
Q ss_pred CEEEecCh-hhHHHHHhhcCeEEECCC---hH-HHHH-HHHhCCcEEEecc
Q 036427 410 PVQVKGFV-SKMEEAMGACDCIITKAG---PG-TIAE-AMIRGLPIILNDF 454 (536)
Q Consensus 410 ~V~~~G~v-~~l~~ll~~aDv~V~~sG---~~-tllE-Ama~GlPVI~~~~ 454 (536)
.+++.-+. .++.+.+..+|++++.+- -. .+-| +--.|+||-++|.
T Consensus 31 ~~~I~A~s~~e~~~~~~~~DvvLlGPQv~y~~~~~~~~~~~~giPV~vI~~ 81 (102)
T COG1440 31 DVTIEAYSETELSEYIDNADVVLLGPQVRYMLKQLKEAAEEKGIPVEVIDM 81 (102)
T ss_pred ceEEEEechhHHHHhhhcCCEEEEChHHHHHHHHHHHHhcccCCCeEEeCH
Confidence 44444443 578888999999888652 11 2222 4456789999984
No 410
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=21.14 E-value=1.9e+02 Score=28.31 Aligned_cols=39 Identities=18% Similarity=0.278 Sum_probs=29.8
Q ss_pred CceEEEEe-CCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILM-SDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~-~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
..|++.++ ..-|-|-...+..||.+|.+. |..|.++|..
T Consensus 102 ~~~vi~vts~~~g~Gktt~a~nLA~~la~~---g~~VllID~D 141 (274)
T TIGR03029 102 GRKALAVVSAKSGEGCSYIAANLAIVFSQL---GEKTLLIDAN 141 (274)
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHhc---CCeEEEEeCC
Confidence 34555555 445568999999999999988 8899999863
No 411
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=21.10 E-value=8e+02 Score=24.14 Aligned_cols=143 Identities=15% Similarity=0.155 Sum_probs=67.6
Q ss_pred CEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--HH-HHHH-HcCCCCCCEEEecCh---hhHHHH
Q 036427 351 PAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK--KL-ANKL-LSTDWKIPVQVKGFV---SKMEEA 423 (536)
Q Consensus 351 ~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--~l-~~~l-~~~~~~~~V~~~G~v---~~l~~l 423 (536)
+.++++....+.+.+.++++.+.+ +|..-.+-..|.+. .+ ...+ ++.++ ++..++|- +-+.++
T Consensus 79 ~~vl~v~~dsp~~t~~eli~~ak~--------~p~~~~~g~~g~g~~~hl~~~~l~~~~G~--~~~~Vpy~G~~~~~~al 148 (274)
T PF03401_consen 79 PNVLVVRADSPYKTLEELIEYAKA--------NPGKLTFGSSGPGSSDHLAAALLAKAAGI--KFTHVPYDGGAEALTAL 148 (274)
T ss_dssp EEEEEEETTSS-SSHHHHHHHHHC--------SCCC-EEEESSTTSHHHHHHHHHHHHHT-----EEEE-SSHHHHHHHH
T ss_pred ceEEEEeCCCccccHHHHHHHHHh--------CCCCeEEEecCCCchHHHHHHHHHHHhCC--ceEEEEeCCccHHHHHH
Confidence 456677666667777766655542 34321223344432 22 1222 23343 34555554 345555
Q ss_pred H-hhcCeEEECCChHHHHHHHHhCCcE--EEeccCCccccCChhhHhhCCc---------eeecC--C----HHHHHHHH
Q 036427 424 M-GACDCIITKAGPGTIAEAMIRGLPI--ILNDFIAGQEAGNVPYVVENGC---------GKFSK--S----PKEIANMV 485 (536)
Q Consensus 424 l-~~aDv~V~~sG~~tllEAma~GlPV--I~~~~~~~~e~~na~~lv~~g~---------g~~~~--d----~~~La~~I 485 (536)
+ .+.|+.+... .........|.=. .++........-++..+.+.|. |++.+ . .+.|.+++
T Consensus 149 lgG~vd~~~~~~--~~~~~~~~~G~~k~Lav~~~~r~~~~pdvPT~~E~G~~d~~~~~~~g~~~p~gtp~~~~~~l~~a~ 226 (274)
T PF03401_consen 149 LGGHVDAAFGSP--GEALPYVEAGDLKPLAVFSDERSPALPDVPTFKEQGYPDIVFGSWRGLFAPKGTPDEIVDKLADAI 226 (274)
T ss_dssp HTTSSSEEEEEH--HHHHHHHHTTSEEEEEECSSS-BTTCTTS-BTTTTT-TTG--EEEEEEEEETTS-HHHHHHHHHHH
T ss_pred hCCeeeEEeecH--HHHHHHHhCCCceEEEEecCccccccCCCCCHHHhCccceeeeeeeeeecCCCCCHHHHHHHHHHH
Confidence 5 3567766543 3455666667432 2222111111222333444443 22232 3 35667778
Q ss_pred HHHhCCCHHHHHHHHHHHHHh
Q 036427 486 SQWFGPKIDELKAMSQNALKL 506 (536)
Q Consensus 486 ~~ll~~d~~~~~~m~~~a~~~ 506 (536)
++.++ +|+..+.+.+.+...
T Consensus 227 ~~~~~-~pe~~~~~~~~g~~~ 246 (274)
T PF03401_consen 227 KKALE-DPEFQEFLEKMGLEP 246 (274)
T ss_dssp HHHHT--HHHHHHHHHHTEEE
T ss_pred HHHhC-CHHHHHHHHHCCCcC
Confidence 88888 999888887766543
No 412
>PRK14569 D-alanyl-alanine synthetase A; Provisional
Probab=21.06 E-value=1.9e+02 Score=28.99 Aligned_cols=39 Identities=15% Similarity=0.247 Sum_probs=29.7
Q ss_pred CCceEEEEeCCCC---chHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 143 QPKKVLILMSDTG---GGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 143 ~~mKIL~~~~~~G---gGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.++||+++++|.- --....+.+++++|.+. ||+++.++.
T Consensus 2 ~~~~i~vl~gg~s~e~~vsl~s~~~v~~aL~~~---g~~~~~~~~ 43 (296)
T PRK14569 2 KNEKIVVLYGGDSPEREVSLKSGKAVLDSLISQ---GYDAVGVDA 43 (296)
T ss_pred CCcEEEEEeCCCCCchHhHHHHHHHHHHHHHHc---CCEEEEEcC
Confidence 4789999997641 24557888999999998 888877653
No 413
>PRK10818 cell division inhibitor MinD; Provisional
Probab=21.00 E-value=1.9e+02 Score=28.24 Aligned_cols=39 Identities=21% Similarity=0.309 Sum_probs=29.8
Q ss_pred ce-EEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KK-VLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mK-IL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
+| |.|....-|-|-...+..||..|.++ |..|.++|...
T Consensus 2 ~kviav~s~KGGvGKTt~a~nlA~~la~~---g~~vllvD~D~ 41 (270)
T PRK10818 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQK---GKKTVVIDFDI 41 (270)
T ss_pred ceEEEEEeCCCCCcHHHHHHHHHHHHHHC---CCeEEEEECCC
Confidence 35 44554444459999999999999988 88999998754
No 414
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=20.98 E-value=1.3e+02 Score=28.24 Aligned_cols=34 Identities=18% Similarity=0.209 Sum_probs=23.5
Q ss_pred ceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 145 KKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 145 mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
||||++-.+ . +..-..+|+++|++. |++|+|+..
T Consensus 1 M~ILlTNDDGi---~a~Gi~aL~~~L~~~---g~~V~VvAP 35 (196)
T PF01975_consen 1 MRILLTNDDGI---DAPGIRALAKALSAL---GHDVVVVAP 35 (196)
T ss_dssp SEEEEE-SS-T---TSHHHHHHHHHHTTT---SSEEEEEEE
T ss_pred CeEEEEcCCCC---CCHHHHHHHHHHHhc---CCeEEEEeC
Confidence 899998654 3 334566789999665 688888754
No 415
>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism]
Probab=20.94 E-value=3.1e+02 Score=25.36 Aligned_cols=94 Identities=13% Similarity=0.146 Sum_probs=52.4
Q ss_pred cCCHHHHHHHHcCCCCCCEEE---ecChhhHHHHHhhcC--eEEECC-------C-hHHHHHHHH-hCCcEEEeccCCc-
Q 036427 393 GRNKKLANKLLSTDWKIPVQV---KGFVSKMEEAMGACD--CIITKA-------G-PGTIAEAMI-RGLPIILNDFIAG- 457 (536)
Q Consensus 393 G~~~~l~~~l~~~~~~~~V~~---~G~v~~l~~ll~~aD--v~V~~s-------G-~~tllEAma-~GlPVI~~~~~~~- 457 (536)
-..+..++.+.+.+. .|.- -||++|+...+...- ++|.++ . =.++.+++. ..+|++.....+.
T Consensus 50 p~tp~t~~~~~~~gv--~vi~tpG~GYv~Dl~~al~~l~~P~lvvsaDLp~l~~~~i~~vi~~~~~~~~p~~~~~~~G~v 127 (177)
T COG2266 50 PHTPKTKEYLESVGV--KVIETPGEGYVEDLRFALESLGTPILVVSADLPFLNPSIIDSVIDAAASVEVPIVTVVKAGRV 127 (177)
T ss_pred CCCHhHHHHHHhcCc--eEEEcCCCChHHHHHHHHHhcCCceEEEecccccCCHHHHHHHHHHHhhccCceeEeeccCcc
Confidence 334556666665442 2222 357888888888776 666665 1 246777777 7788887765332
Q ss_pred ---------cccCChhhHhhCCceeecCCHHHHHHHHHHH
Q 036427 458 ---------QEAGNVPYVVENGCGKFSKSPKEIANMVSQW 488 (536)
Q Consensus 458 ---------~e~~na~~lv~~g~g~~~~d~~~La~~I~~l 488 (536)
.+.+....+...+...-+++++++.++-+.+
T Consensus 128 ~~Glni~~~~~~~~~~~i~~~~la~NVNT~eDl~~a~~ll 167 (177)
T COG2266 128 PVGLNIVGGKQEEEILEIDNPELAVNVNTPEDLKKAERLL 167 (177)
T ss_pred ceeeEeecCCCcceeEEeeccceeEecCCHHHHHHHHHHH
Confidence 2222222222223333445788877665443
No 416
>COG0371 GldA Glycerol dehydrogenase and related enzymes [Energy production and conversion]
Probab=20.89 E-value=6e+02 Score=26.45 Aligned_cols=69 Identities=29% Similarity=0.408 Sum_probs=41.3
Q ss_pred EEEEEecCCH------HHHHHHHcCCCCCCEEEecCh--hhHHHHHh-----hcCeEEECCChHHHHH-----HHHhCCc
Q 036427 387 QVLVICGRNK------KLANKLLSTDWKIPVQVKGFV--SKMEEAMG-----ACDCIITKAGPGTIAE-----AMIRGLP 448 (536)
Q Consensus 387 ~~lvi~G~~~------~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~-----~aDv~V~~sG~~tllE-----Ama~GlP 448 (536)
+.++++|... .+.+.++..++...+.+.|.. +++..+-. .+|++|--+| ++++. |--.|+|
T Consensus 32 ~~lvv~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~a~~~ev~~~~~~~~~~~~d~vIGVGG-Gk~iD~aK~~A~~~~~p 110 (360)
T COG0371 32 RALVVTGENTYAIAGEKVEKSLKDEGLVVHVVFVGEASEEEVERLAAEAGEDGADVVIGVGG-GKTIDTAKAAAYRLGLP 110 (360)
T ss_pred ceEEEEChhHHHHHHHHHHHHhcccCcceeeeecCccCHHHHHHHHHHhcccCCCEEEEecC-cHHHHHHHHHHHHcCCC
Confidence 4567777653 233334444444455566654 35555554 3577776544 55555 6778999
Q ss_pred EEEeccCC
Q 036427 449 IILNDFIA 456 (536)
Q Consensus 449 VI~~~~~~ 456 (536)
+|..|...
T Consensus 111 fIsvPT~A 118 (360)
T COG0371 111 FISVPTIA 118 (360)
T ss_pred EEEecCcc
Confidence 99999854
No 417
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=20.88 E-value=3.2e+02 Score=25.15 Aligned_cols=71 Identities=18% Similarity=0.226 Sum_probs=43.2
Q ss_pred hHHHHHhhcCeEEECC-C---------hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceee-cC--CHHHHHHHH
Q 036427 419 KMEEAMGACDCIITKA-G---------PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKF-SK--SPKEIANMV 485 (536)
Q Consensus 419 ~l~~ll~~aDv~V~~s-G---------~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~-~~--d~~~La~~I 485 (536)
-+...+..||++|.-= | .-.+-|.|-+++|+|++-+-..... ..+.+...+...+ +. +-+.+...|
T Consensus 93 al~rA~~~aDvIIIDEIGpMElks~~f~~~ve~vl~~~kpliatlHrrsr~P-~v~~ik~~~~v~v~lt~~NR~~i~~~I 171 (179)
T COG1618 93 ALRRALEEADVIIIDEIGPMELKSKKFREAVEEVLKSGKPLIATLHRRSRHP-LVQRIKKLGGVYVFLTPENRNRILNEI 171 (179)
T ss_pred HHHHHhhcCCEEEEecccchhhccHHHHHHHHHHhcCCCcEEEEEecccCCh-HHHHhhhcCCEEEEEccchhhHHHHHH
Confidence 4556667789988752 3 2355678999999999876332111 2333444454444 42 555777777
Q ss_pred HHHhC
Q 036427 486 SQWFG 490 (536)
Q Consensus 486 ~~ll~ 490 (536)
..+|.
T Consensus 172 l~~L~ 176 (179)
T COG1618 172 LSVLK 176 (179)
T ss_pred HHHhc
Confidence 76665
No 418
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=20.84 E-value=7.2e+02 Score=23.52 Aligned_cols=36 Identities=14% Similarity=0.173 Sum_probs=25.0
Q ss_pred hhHHHHHhhcCeEEECCC-h-------------HHHHHHHHhCCcEEEec
Q 036427 418 SKMEEAMGACDCIITKAG-P-------------GTIAEAMIRGLPIILND 453 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~~sG-~-------------~tllEAma~GlPVI~~~ 453 (536)
+++.+.+..||++++.+| . ..+.++...|+|++.+-
T Consensus 75 ~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~l~~~l~~~~~~G~v~~G~S 124 (217)
T cd03145 75 PEVVARLRDADGIFFTGGDQLRITSALGGTPLLDALRKVYRGGVVIGGTS 124 (217)
T ss_pred HHHHHHHHhCCEEEEeCCcHHHHHHHHcCChHHHHHHHHHHcCCEEEEcc
Confidence 366788999999988865 1 12444666788877654
No 419
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=20.63 E-value=1.3e+02 Score=32.31 Aligned_cols=36 Identities=17% Similarity=0.284 Sum_probs=29.0
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEee
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTD 183 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~ 183 (536)
...+|++... |.||......+|+.|.++ ||.|.+..
T Consensus 5 ~~~~il~~~p--~~sH~~~~~~la~~L~~~---gh~vt~~~ 40 (496)
T KOG1192|consen 5 KAHNILVPFP--GQSHLNPMLQLAKRLAER---GHNVTVVT 40 (496)
T ss_pred cceeEEEECC--cccHHHHHHHHHHHHHHc---CCceEEEE
Confidence 4457777777 579999999999999999 67776554
No 420
>PRK01355 azoreductase; Reviewed
Probab=20.58 E-value=2.5e+02 Score=26.27 Aligned_cols=43 Identities=14% Similarity=0.230 Sum_probs=27.3
Q ss_pred CceEEEEeCCC---Cch-HHHHHHHHHHHHHhccCCceEEEEeecccc
Q 036427 144 PKKVLILMSDT---GGG-HRASAEAIKAAFHEKFGNEYQVFVTDLWSD 187 (536)
Q Consensus 144 ~mKIL~~~~~~---GgG-h~~~~l~La~~L~~~~g~g~eV~v~~~~~~ 187 (536)
|||||++.+.. .+| ...-+..+++.+.+. +.+++|.+.++...
T Consensus 1 M~kIliI~gSpr~~~~s~s~~l~~~~~~~~~~~-~~~~~v~~~dL~~~ 47 (199)
T PRK01355 1 MSKVLVIKGSMVAKEKSFSSALTDKFVEEYKKV-NPNDEIIILDLNET 47 (199)
T ss_pred CCeEEEEECCCCCCCCcHHHHHHHHHHHHHHHh-CCCCeEEEEeCCCC
Confidence 57999887543 123 344555677777775 22688888887543
No 421
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=20.53 E-value=8.8e+02 Score=24.41 Aligned_cols=54 Identities=20% Similarity=0.179 Sum_probs=34.5
Q ss_pred HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC-------------C-hHHHHHHHHhCCcEEEec
Q 036427 397 KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA-------------G-PGTIAEAMIRGLPIILND 453 (536)
Q Consensus 397 ~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s-------------G-~~tllEAma~GlPVI~~~ 453 (536)
.+.+.+.+.++ +++++.- .-+..+|..+|.+++.+ | ....+=|-.+++|+++.-
T Consensus 157 ~~a~~L~~~gI--~vtlI~D-sa~~~~m~~vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~a 224 (301)
T TIGR00511 157 ITAKELRDYGI--PVTLIVD-SAVRYFMKEVDHVVVGADAITANGALINKIGTSQLALAAREARVPFMVAA 224 (301)
T ss_pred HHHHHHHHCCC--CEEEEeh-hHHHHHHHhCCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEEc
Confidence 44556666554 4554431 35677889999988763 3 234445777899999864
No 422
>PRK13525 glutamine amidotransferase subunit PdxT; Provisional
Probab=20.47 E-value=3.7e+02 Score=24.91 Aligned_cols=62 Identities=21% Similarity=0.207 Sum_probs=36.3
Q ss_pred EEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHH--------------HHHHHHhCCcEEEe
Q 036427 387 QVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGT--------------IAEAMIRGLPIILN 452 (536)
Q Consensus 387 ~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~t--------------llEAma~GlPVI~~ 452 (536)
.++++-|.-.+..+.++..+. .+.++.. .+-+..+|.+|.++|+.+ +-+++..|+|++.+
T Consensus 5 ~i~~~~g~~~~~~~~l~~~g~--~~~~~~~----~~~l~~~dgiii~GG~~~~~~~~~~~~~~~~~i~~~~~~g~PilGI 78 (189)
T PRK13525 5 GVLALQGAVREHLAALEALGA--EAVEVRR----PEDLDEIDGLILPGGESTTMGKLLRDFGLLEPLREFIASGLPVFGT 78 (189)
T ss_pred EEEEcccCHHHHHHHHHHCCC--EEEEeCC----hhHhccCCEEEECCCChHHHHHHHHhccHHHHHHHHHHCCCeEEEE
Confidence 344455555445455554332 3444332 233567899999887432 23577789999987
Q ss_pred cc
Q 036427 453 DF 454 (536)
Q Consensus 453 ~~ 454 (536)
-.
T Consensus 79 C~ 80 (189)
T PRK13525 79 CA 80 (189)
T ss_pred CH
Confidence 64
No 423
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=20.42 E-value=2e+02 Score=26.13 Aligned_cols=37 Identities=22% Similarity=0.288 Sum_probs=29.6
Q ss_pred EEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 147 VLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 147 IL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|.|+...-|-|-...+..||..|.++ |..|.++|...
T Consensus 1 I~v~~~kGG~GKTt~a~~la~~la~~---g~~VlliD~D~ 37 (195)
T PF01656_consen 1 IAVTSGKGGVGKTTIAANLAQALARK---GKKVLLIDLDP 37 (195)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHT---TS-EEEEEEST
T ss_pred CEEEcCCCCccHHHHHHHHHhccccc---cccccccccCc
Confidence 55666656669999999999999998 89999998744
No 424
>PF02585 PIG-L: GlcNAc-PI de-N-acetylase; InterPro: IPR003737 A number of the members of this family have been characterised as a probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, (3.5.1.89 from EC) that catalyses the second step in glycosylphosphatidylinositol (GPI) biosynthesis [, ]. The family also includes a number of thiol biosynthesis proteins. ; PDB: 2XAD_C 2X9L_A 3DFK_A 3DFM_A 3DFF_A 2IXD_A 1UAN_A 1Q74_B 1Q7T_B 3DFI_A.
Probab=20.37 E-value=88 Score=26.72 Aligned_cols=26 Identities=15% Similarity=0.428 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHhhCCCEEEEcCccc
Q 036427 232 TFIAREVAKGLMKYQPDIIISVHPLM 257 (536)
Q Consensus 232 ~~~~~~l~~~l~~~kPDvVi~~~~~~ 257 (536)
......+.+++++++||+|+++.+.-
T Consensus 86 ~~~~~~l~~~i~~~~p~~V~t~~~~~ 111 (128)
T PF02585_consen 86 EELVRDLEDLIREFRPDVVFTPDPDD 111 (128)
T ss_dssp HHHHHHHHHHHHHH-ESEEEEE-STT
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 34556888999999999999987543
No 425
>PRK13232 nifH nitrogenase reductase; Reviewed
Probab=20.30 E-value=1.7e+02 Score=28.75 Aligned_cols=38 Identities=13% Similarity=0.274 Sum_probs=30.3
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|.|.|. ..-|=|-...+..||.+|.++ |..|.++|...
T Consensus 2 ~~iav~-gKGGVGKTT~a~nLA~~La~~---G~rVllvD~Dp 39 (273)
T PRK13232 2 RQIAIY-GKGGIGKSTTTQNLTAALSTM---GNKILLVGCDP 39 (273)
T ss_pred CEEEEE-CCCCCcHHHHHHHHHHHHHhh---CCCeEEEeccc
Confidence 456666 545558899999999999998 88999998644
No 426
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=20.04 E-value=2e+02 Score=27.48 Aligned_cols=39 Identities=21% Similarity=0.192 Sum_probs=29.8
Q ss_pred ce-EEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KK-VLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mK-IL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|| |.|....-|-|-...+..||..|.++ |..|.++|...
T Consensus 1 m~iI~v~s~KGGvGKTt~a~nla~~la~~---g~~VlliD~D~ 40 (246)
T TIGR03371 1 MKVIAIVGVKGGVGKTTLTANLASALKLL---GEPVLAIDLDP 40 (246)
T ss_pred CcEEEEEeCCCCccHHHHHHHHHHHHHhC---CCcEEEEeCCC
Confidence 44 44444444459999999999999988 88999998754
Done!