Query 036427
Match_columns 536
No_of_seqs 214 out of 2425
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 21:45:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036427.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036427hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s2u_A UDP-N-acetylglucosamine 100.0 1.4E-32 4.7E-37 284.8 33.8 341 143-526 1-358 (365)
2 1f0k_A MURG, UDP-N-acetylgluco 100.0 6.1E-30 2.1E-34 263.3 32.7 338 145-525 7-356 (364)
3 3c48_A Predicted glycosyltrans 100.0 3.6E-29 1.2E-33 264.0 34.0 358 140-525 16-424 (438)
4 2r60_A Glycosyl transferase, g 100.0 1.7E-30 5.7E-35 279.7 23.0 366 138-525 1-458 (499)
5 3okp_A GDP-mannose-dependent a 100.0 2.2E-28 7.5E-33 253.6 32.3 345 141-525 1-378 (394)
6 2jjm_A Glycosyl transferase, g 100.0 6.3E-28 2.1E-32 251.3 34.8 349 143-525 14-384 (394)
7 3fro_A GLGA glycogen synthase; 100.0 1.6E-27 5.6E-32 250.4 32.1 362 143-525 1-429 (439)
8 2gek_A Phosphatidylinositol ma 100.0 4.5E-27 1.5E-31 244.9 28.5 343 139-525 15-382 (406)
9 2x6q_A Trehalose-synthase TRET 100.0 3.1E-27 1.1E-31 247.8 26.7 346 141-525 37-413 (416)
10 3oy2_A Glycosyltransferase B73 100.0 1.1E-25 3.9E-30 235.5 35.6 336 145-525 1-389 (413)
11 3beo_A UDP-N-acetylglucosamine 100.0 6.4E-27 2.2E-31 241.5 25.6 351 141-524 5-374 (375)
12 1vgv_A UDP-N-acetylglucosamine 100.0 1.2E-27 4.1E-32 247.9 19.5 353 145-528 1-378 (384)
13 2iw1_A Lipopolysaccharide core 100.0 4.3E-28 1.5E-32 249.8 15.1 337 145-525 1-370 (374)
14 1rzu_A Glycogen synthase 1; gl 99.9 5.9E-26 2E-30 243.0 29.3 265 243-527 127-476 (485)
15 2qzs_A Glycogen synthase; glyc 99.9 1.2E-25 4E-30 240.7 31.0 270 236-526 115-476 (485)
16 1v4v_A UDP-N-acetylglucosamine 99.9 2.7E-26 9.2E-31 237.4 21.2 272 235-525 80-367 (376)
17 3dzc_A UDP-N-acetylglucosamine 99.9 6.7E-26 2.3E-30 237.1 23.8 351 139-520 20-395 (396)
18 3ot5_A UDP-N-acetylglucosamine 99.9 5.4E-25 1.9E-29 230.6 25.1 351 142-525 25-394 (403)
19 3otg_A CALG1; calicheamicin, T 99.9 5.6E-25 1.9E-29 230.2 22.2 350 139-525 15-409 (412)
20 3s28_A Sucrose synthase 1; gly 99.9 2.3E-24 8E-29 241.8 24.0 274 236-525 395-768 (816)
21 2iyf_A OLED, oleandomycin glyc 99.9 9.6E-24 3.3E-28 222.4 25.7 345 139-525 2-400 (430)
22 2iuy_A Avigt4, glycosyltransfe 99.9 4.8E-24 1.7E-28 217.5 20.2 295 142-525 1-334 (342)
23 3rsc_A CALG2; TDP, enediyne, s 99.9 1.2E-22 4.2E-27 212.8 30.5 354 137-525 13-414 (415)
24 3ia7_A CALG4; glycosysltransfe 99.9 1.7E-22 5.8E-27 210.3 31.0 345 142-525 2-399 (402)
25 4fzr_A SSFS6; structural genom 99.9 7.9E-24 2.7E-28 220.9 17.9 350 141-521 12-397 (398)
26 3tsa_A SPNG, NDP-rhamnosyltran 99.9 9.7E-22 3.3E-26 204.3 25.1 353 144-526 1-390 (391)
27 3vue_A GBSS-I, granule-bound s 99.9 7.2E-21 2.5E-25 206.2 32.7 217 293-525 240-510 (536)
28 2vsy_A XCC0866; transferase, g 99.9 1.3E-21 4.5E-26 213.5 25.9 337 140-525 201-558 (568)
29 3oti_A CALG3; calicheamicin, T 99.9 3.2E-22 1.1E-26 208.8 19.4 353 139-524 15-397 (398)
30 2iya_A OLEI, oleandomycin glyc 99.9 1.6E-20 5.5E-25 197.6 29.3 166 348-525 253-422 (424)
31 2p6p_A Glycosyl transferase; X 99.9 9.7E-20 3.3E-24 188.8 31.6 345 145-525 1-380 (384)
32 2xci_A KDO-transferase, 3-deox 99.9 2.4E-20 8.1E-25 193.5 23.6 312 145-517 41-372 (374)
33 1iir_A Glycosyltransferase GTF 99.9 3.1E-20 1.1E-24 195.1 24.6 163 348-526 236-402 (415)
34 4hwg_A UDP-N-acetylglucosamine 99.9 1.5E-21 5.2E-26 203.0 14.2 273 233-524 81-375 (385)
35 4amg_A Snogd; transferase, pol 99.9 2E-20 7E-25 194.7 22.8 351 142-522 20-398 (400)
36 2yjn_A ERYCIII, glycosyltransf 99.9 3.9E-20 1.3E-24 195.9 24.1 169 347-527 264-438 (441)
37 2x0d_A WSAF; GT4 family, trans 99.8 3.7E-21 1.3E-25 202.1 13.0 327 142-518 44-402 (413)
38 1rrv_A Glycosyltransferase GTF 99.8 3.3E-19 1.1E-23 187.2 26.5 164 348-526 235-403 (416)
39 3h4t_A Glycosyltransferase GTF 99.8 9.5E-19 3.2E-23 183.2 29.2 170 338-526 211-384 (404)
40 2hy7_A Glucuronosyltransferase 99.8 4.6E-20 1.6E-24 193.4 12.8 232 238-525 118-378 (406)
41 2bfw_A GLGA glycogen synthase; 99.7 1.4E-16 4.7E-21 149.4 17.0 172 322-508 2-197 (200)
42 3hbm_A UDP-sugar hydrolase; PS 99.7 8.9E-17 3.1E-21 159.2 16.0 265 145-476 1-273 (282)
43 1uqt_A Alpha, alpha-trehalose- 99.7 1.1E-15 3.8E-20 163.0 23.1 267 246-526 123-454 (482)
44 2c1x_A UDP-glucose flavonoid 3 99.6 8.1E-15 2.8E-19 155.7 21.3 154 340-504 261-423 (456)
45 3rhz_A GTF3, nucleotide sugar 99.6 8.2E-15 2.8E-19 149.3 19.6 227 240-509 67-319 (339)
46 3qhp_A Type 1 capsular polysac 99.6 1.7E-15 5.9E-20 137.5 12.2 152 351-517 3-165 (166)
47 2acv_A Triterpene UDP-glucosyl 99.6 4.9E-14 1.7E-18 150.0 25.3 355 143-521 8-459 (463)
48 3nb0_A Glycogen [starch] synth 99.6 5.8E-14 2E-18 151.7 24.9 102 419-525 511-632 (725)
49 3t5t_A Putative glycosyltransf 99.6 9.7E-14 3.3E-18 147.0 26.1 262 246-525 149-472 (496)
50 2o6l_A UDP-glucuronosyltransfe 99.6 2.7E-14 9.4E-19 130.6 16.2 152 338-504 9-166 (170)
51 2f9f_A First mannosyl transfer 99.6 1.3E-14 4.3E-19 133.8 11.6 145 345-505 18-176 (177)
52 2pq6_A UDP-glucuronosyl/UDP-gl 99.5 4.3E-12 1.5E-16 135.7 30.7 155 340-505 285-451 (482)
53 3hbf_A Flavonoid 3-O-glucosylt 99.5 9.8E-12 3.4E-16 131.3 28.8 166 318-493 241-415 (454)
54 2vch_A Hydroquinone glucosyltr 99.5 9.1E-12 3.1E-16 133.0 25.3 166 317-490 234-428 (480)
55 3q3e_A HMW1C-like glycosyltran 99.2 1.7E-09 5.7E-14 116.5 24.0 267 235-525 338-626 (631)
56 2jzc_A UDP-N-acetylglucosamine 99.2 2.1E-11 7.3E-16 116.0 5.6 138 344-488 22-196 (224)
57 1psw_A ADP-heptose LPS heptosy 98.6 2.3E-06 7.8E-11 86.7 20.8 268 145-457 1-291 (348)
58 4gyw_A UDP-N-acetylglucosamine 98.5 8.6E-06 3E-10 90.9 24.2 178 341-525 514-704 (723)
59 3tov_A Glycosyl transferase fa 98.5 3E-05 1E-09 78.9 25.5 268 142-457 6-291 (349)
60 2gt1_A Lipopolysaccharide hept 98.3 0.00021 7.2E-09 71.5 26.1 301 145-490 1-321 (326)
61 3l7i_A Teichoic acid biosynthe 97.9 7.9E-05 2.7E-09 83.4 14.3 222 294-525 478-720 (729)
62 2iz6_A Molybdenum cofactor car 89.0 0.93 3.2E-05 40.7 7.2 66 421-490 102-173 (176)
63 3ehd_A Uncharacterized conserv 86.8 1.4 4.6E-05 39.1 6.8 69 421-489 64-161 (162)
64 2c4m_A Glycogen phosphorylase; 86.3 40 0.0014 37.2 19.4 160 294-454 402-648 (796)
65 1rcu_A Conserved hypothetical 84.6 1.2 4.1E-05 40.7 5.5 71 418-489 110-193 (195)
66 2gj4_A Glycogen phosphorylase, 84.6 17 0.00059 40.3 15.5 111 342-453 540-681 (824)
67 1s2d_A Purine trans deoxyribos 83.8 0.99 3.4E-05 40.2 4.4 63 419-482 75-149 (167)
68 1l5w_A Maltodextrin phosphoryl 81.1 23 0.00078 39.1 14.7 184 294-483 413-685 (796)
69 1t35_A Hypothetical protein YV 77.7 14 0.00049 33.3 10.1 71 418-488 89-179 (191)
70 4fyk_A Deoxyribonucleoside 5'- 76.7 3.9 0.00013 35.7 5.7 67 421-490 63-141 (152)
71 2f62_A Nucleoside 2-deoxyribos 76.6 8.7 0.0003 33.7 8.1 69 421-490 62-159 (161)
72 3ro0_A Pyrrolidone-carboxylate 76.4 2.7 9.3E-05 39.2 4.9 30 144-173 2-32 (223)
73 2khz_A C-MYC-responsive protei 75.4 7.7 0.00026 34.2 7.5 34 421-454 72-111 (165)
74 3auf_A Glycinamide ribonucleot 74.6 24 0.00081 32.8 11.0 41 138-183 16-57 (229)
75 3qua_A Putative uncharacterize 74.2 51 0.0017 29.9 13.0 38 418-455 109-156 (199)
76 3i42_A Response regulator rece 73.0 34 0.0011 27.2 11.7 33 142-182 1-33 (127)
77 2zki_A 199AA long hypothetical 69.9 7.1 0.00024 35.0 6.1 39 143-185 3-41 (199)
78 2a5l_A Trp repressor binding p 69.0 7.6 0.00026 34.7 6.1 42 142-186 3-44 (200)
79 3h75_A Periplasmic sugar-bindi 68.9 55 0.0019 31.7 13.0 39 143-184 2-42 (350)
80 2gkg_A Response regulator homo 67.1 16 0.00054 29.0 7.2 33 142-182 3-35 (127)
81 2a33_A Hypothetical protein; s 66.8 47 0.0016 30.5 11.0 71 419-489 102-192 (215)
82 3nrb_A Formyltetrahydrofolate 66.6 37 0.0013 32.7 10.7 20 236-255 155-174 (287)
83 3sbx_A Putative uncharacterize 66.5 59 0.002 29.1 11.3 38 418-455 100-147 (189)
84 3grc_A Sensor protein, kinase; 65.5 26 0.00088 28.6 8.4 34 141-182 3-36 (140)
85 1ydh_A AT5G11950; structural g 65.3 29 0.00099 31.9 9.2 73 418-490 97-189 (216)
86 2ixd_A LMBE-related protein; h 64.6 44 0.0015 31.2 10.6 23 233-255 84-106 (242)
87 3q9s_A DNA-binding response re 64.0 29 0.001 32.1 9.3 34 141-182 34-67 (249)
88 3to5_A CHEY homolog; alpha(5)b 64.0 50 0.0017 27.6 9.9 40 240-279 51-93 (134)
89 2ywr_A Phosphoribosylglycinami 63.9 29 0.00098 31.9 9.0 20 236-255 70-89 (216)
90 3eod_A Protein HNR; response r 63.8 47 0.0016 26.4 9.7 35 140-182 3-37 (130)
91 3f6p_A Transcriptional regulat 63.5 44 0.0015 26.3 9.3 16 240-255 40-55 (120)
92 3gt7_A Sensor protein; structu 63.2 43 0.0015 27.9 9.6 33 142-182 5-37 (154)
93 3bq9_A Predicted rossmann fold 63.0 75 0.0026 32.5 12.4 78 413-490 231-331 (460)
94 3hv2_A Response regulator/HD d 62.8 37 0.0013 28.2 9.1 38 137-182 7-44 (153)
95 1ydg_A Trp repressor binding p 62.4 13 0.00044 33.7 6.3 42 142-186 4-45 (211)
96 3cg4_A Response regulator rece 61.7 23 0.00077 28.9 7.3 34 141-182 4-37 (142)
97 3f6r_A Flavodoxin; FMN binding 61.0 12 0.00041 31.6 5.5 39 144-185 1-39 (148)
98 4ds3_A Phosphoribosylglycinami 60.5 52 0.0018 30.0 10.0 20 236-255 76-95 (209)
99 2zay_A Response regulator rece 60.4 26 0.00088 28.8 7.5 33 142-182 6-38 (147)
100 1uan_A Hypothetical protein TT 60.4 44 0.0015 30.8 9.7 23 233-255 82-104 (227)
101 3giu_A Pyrrolidone-carboxylate 60.1 9 0.00031 35.4 4.7 30 143-172 2-32 (215)
102 2qxy_A Response regulator; reg 59.3 38 0.0013 27.5 8.4 33 142-182 2-34 (142)
103 3egc_A Putative ribose operon 58.3 1.2E+02 0.004 28.2 13.6 40 142-184 6-46 (291)
104 3da8_A Probable 5'-phosphoribo 57.4 34 0.0012 31.4 8.2 21 235-255 78-98 (215)
105 3lte_A Response regulator; str 57.4 49 0.0017 26.3 8.6 33 142-182 4-36 (132)
106 3g1w_A Sugar ABC transporter; 56.5 1.3E+02 0.0044 28.1 15.4 38 142-182 2-40 (305)
107 3lac_A Pyrrolidone-carboxylate 55.9 11 0.00036 34.9 4.4 29 144-172 1-30 (215)
108 3cg0_A Response regulator rece 55.8 27 0.00094 28.2 6.8 33 140-180 5-37 (140)
109 2qvg_A Two component response 55.5 43 0.0015 27.1 8.1 26 142-172 5-30 (143)
110 2l2q_A PTS system, cellobiose- 54.6 43 0.0015 26.9 7.5 67 386-453 5-83 (109)
111 1x10_A Pyrrolidone-carboxylate 54.4 17 0.00057 33.4 5.5 28 145-172 1-29 (208)
112 2vzf_A NADH-dependent FMN redu 54.4 21 0.0007 32.0 6.1 39 144-185 2-43 (197)
113 3nhm_A Response regulator; pro 53.9 81 0.0028 25.0 11.6 101 141-300 1-104 (133)
114 3q0i_A Methionyl-tRNA formyltr 53.3 32 0.0011 33.6 7.7 19 237-255 76-94 (318)
115 2xj4_A MIPZ; replication, cell 53.0 15 0.0005 35.2 5.1 40 144-186 3-43 (286)
116 4gxh_A Pyrrolidone-carboxylate 52.7 12 0.00043 34.4 4.3 29 144-172 2-31 (216)
117 3gl9_A Response regulator; bet 52.6 83 0.0028 24.7 9.4 82 143-282 1-85 (122)
118 3kcq_A Phosphoribosylglycinami 52.1 75 0.0026 29.1 9.6 20 236-255 72-91 (215)
119 3lua_A Response regulator rece 51.9 31 0.0011 28.1 6.5 33 142-182 2-35 (140)
120 4hps_A Pyrrolidone-carboxylate 51.8 16 0.00054 34.1 4.9 29 144-172 23-52 (228)
121 4gi5_A Quinone reductase; prot 51.7 23 0.00077 34.1 6.2 44 141-187 19-64 (280)
122 3jte_A Response regulator rece 51.7 67 0.0023 26.0 8.7 33 142-182 1-33 (143)
123 2rjn_A Response regulator rece 51.0 75 0.0026 26.1 9.0 34 141-182 4-37 (154)
124 1wek_A Hypothetical protein TT 50.9 72 0.0025 29.2 9.3 70 419-488 124-213 (217)
125 3gv0_A Transcriptional regulat 50.8 1.5E+02 0.0053 27.3 14.8 74 239-325 59-136 (288)
126 3b6i_A Flavoprotein WRBA; flav 50.5 24 0.00082 31.2 5.9 39 144-185 1-40 (198)
127 3av3_A Phosphoribosylglycinami 50.4 83 0.0028 28.6 9.6 20 236-255 72-91 (212)
128 2ark_A Flavodoxin; FMN, struct 50.3 30 0.001 30.6 6.5 39 144-185 4-43 (188)
129 3p9x_A Phosphoribosylglycinami 50.1 57 0.002 29.8 8.4 21 235-255 70-90 (211)
130 3kht_A Response regulator; PSI 49.9 69 0.0023 26.0 8.5 86 141-282 2-90 (144)
131 1a2z_A Pyrrolidone carboxyl pe 49.5 22 0.00074 32.9 5.4 28 145-172 2-30 (220)
132 1f8y_A Nucleoside 2-deoxyribos 48.9 15 0.00052 32.0 4.0 33 422-454 74-114 (157)
133 4e7p_A Response regulator; DNA 48.5 1.1E+02 0.0038 25.0 9.7 87 137-282 13-103 (150)
134 3obi_A Formyltetrahydrofolate 48.4 57 0.002 31.3 8.5 20 236-255 156-175 (288)
135 3o1l_A Formyltetrahydrofolate 48.4 44 0.0015 32.4 7.7 20 236-255 171-190 (302)
136 3hzh_A Chemotaxis response reg 47.5 69 0.0023 26.7 8.2 32 141-180 33-64 (157)
137 3hdv_A Response regulator; PSI 47.4 56 0.0019 26.2 7.4 87 138-282 1-90 (136)
138 3ouz_A Biotin carboxylase; str 47.1 31 0.0011 35.2 6.9 34 142-184 4-37 (446)
139 3n0v_A Formyltetrahydrofolate 47.1 1.1E+02 0.0039 29.2 10.4 20 236-255 156-175 (286)
140 3lou_A Formyltetrahydrofolate 47.1 1.1E+02 0.0038 29.3 10.3 20 236-255 161-180 (292)
141 3rqi_A Response regulator prot 46.9 82 0.0028 27.1 8.9 34 141-182 4-37 (184)
142 3tqr_A Phosphoribosylglycinami 46.9 1E+02 0.0035 28.2 9.6 21 235-255 72-92 (215)
143 1ys7_A Transcriptional regulat 46.7 1.1E+02 0.0038 27.2 10.1 34 140-181 3-36 (233)
144 3ksm_A ABC-type sugar transpor 46.1 1.7E+02 0.0059 26.5 14.2 35 146-183 2-37 (276)
145 2gwr_A DNA-binding response re 45.9 81 0.0028 28.5 9.0 31 144-182 5-35 (238)
146 1k68_A Phytochrome response re 45.9 1.1E+02 0.0037 24.2 11.1 62 427-490 56-130 (140)
147 1zgh_A Methionyl-tRNA formyltr 45.2 40 0.0014 31.9 6.7 36 142-183 28-63 (260)
148 1zgz_A Torcad operon transcrip 44.8 1E+02 0.0036 23.8 8.6 15 240-254 40-54 (122)
149 1kjq_A GART 2, phosphoribosylg 44.6 57 0.0019 32.3 8.3 34 143-185 10-43 (391)
150 3p0r_A Azoreductase; structura 43.4 44 0.0015 30.3 6.6 44 143-187 3-50 (211)
151 3kjh_A CO dehydrogenase/acetyl 43.2 22 0.00074 32.6 4.5 38 145-186 1-38 (254)
152 2qzj_A Two-component response 43.1 81 0.0028 25.4 7.8 84 141-282 1-84 (136)
153 2oho_A Glutamate racemase; iso 43.0 1.9E+02 0.0064 27.2 11.3 35 144-184 12-46 (273)
154 1qv9_A F420-dependent methylen 43.0 49 0.0017 30.8 6.5 19 240-258 58-76 (283)
155 1iow_A DD-ligase, DDLB, D-ALA\ 42.7 30 0.001 32.8 5.6 39 144-185 2-43 (306)
156 4dzz_A Plasmid partitioning pr 41.8 29 0.001 30.6 5.1 38 145-185 1-39 (206)
157 3c3m_A Response regulator rece 41.7 1.3E+02 0.0046 24.0 10.5 42 240-281 41-85 (138)
158 1k66_A Phytochrome response re 41.3 1.1E+02 0.0038 24.6 8.4 26 142-172 4-29 (149)
159 3rfo_A Methionyl-tRNA formyltr 41.2 82 0.0028 30.7 8.4 18 238-255 74-91 (317)
160 1eiw_A Hypothetical protein MT 41.0 40 0.0014 27.4 5.2 66 422-490 34-109 (111)
161 3hly_A Flavodoxin-like domain; 41.0 32 0.0011 29.6 5.0 37 145-184 1-37 (161)
162 4egs_A Ribose 5-phosphate isom 41.0 35 0.0012 30.3 5.3 36 143-179 33-68 (180)
163 2qr3_A Two-component system re 40.5 37 0.0013 27.4 5.2 54 142-253 1-54 (140)
164 3jte_A Response regulator rece 40.1 1.3E+02 0.0046 24.0 8.8 63 426-490 49-122 (143)
165 1kgs_A DRRD, DNA binding respo 39.5 1.7E+02 0.0058 25.7 10.0 32 143-182 1-32 (225)
166 3dm5_A SRP54, signal recogniti 39.5 2.3E+02 0.0079 28.9 11.9 37 145-184 100-136 (443)
167 3r6w_A FMN-dependent NADH-azor 39.3 43 0.0015 30.2 5.8 43 144-187 1-46 (212)
168 3k4h_A Putative transcriptiona 39.2 2.3E+02 0.0078 26.0 17.7 158 237-418 60-229 (292)
169 3uhf_A Glutamate racemase; str 39.1 2.5E+02 0.0087 26.5 11.5 41 136-184 18-58 (274)
170 3tb6_A Arabinose metabolism tr 39.0 2.3E+02 0.0079 25.9 16.2 37 145-184 16-53 (298)
171 3rpe_A MDAB, modulator of drug 38.9 41 0.0014 30.9 5.5 47 136-185 17-69 (218)
172 3qvo_A NMRA family protein; st 38.8 39 0.0013 30.8 5.5 39 140-185 18-57 (236)
173 3zqu_A Probable aromatic acid 38.4 45 0.0015 30.5 5.6 36 142-182 2-37 (209)
174 1f4p_A Flavodoxin; electron tr 38.4 43 0.0015 27.9 5.3 37 145-184 1-37 (147)
175 4etm_A LMPTP, low molecular we 38.2 41 0.0014 29.6 5.3 42 141-183 15-56 (173)
176 2q62_A ARSH; alpha/beta, flavo 38.1 57 0.0019 30.5 6.5 45 139-186 29-75 (247)
177 2pn1_A Carbamoylphosphate synt 38.1 91 0.0031 29.9 8.4 36 142-185 2-37 (331)
178 3nbm_A PTS system, lactose-spe 37.5 41 0.0014 27.2 4.7 68 385-454 6-86 (108)
179 3r0j_A Possible two component 37.4 2.1E+02 0.0072 25.8 10.5 33 142-182 21-53 (250)
180 1zh2_A KDP operon transcriptio 37.3 1.2E+02 0.0041 23.3 7.8 13 242-254 41-53 (121)
181 3sc4_A Short chain dehydrogena 37.2 2.6E+02 0.0089 26.0 11.5 36 144-186 8-43 (285)
182 3ilh_A Two component response 37.1 89 0.0031 25.1 7.1 27 141-172 6-32 (146)
183 2i2c_A Probable inorganic poly 37.1 37 0.0013 32.3 5.1 52 425-490 34-92 (272)
184 3dhn_A NAD-dependent epimerase 37.1 32 0.0011 31.0 4.5 36 143-186 3-38 (227)
185 1yt5_A Inorganic polyphosphate 36.5 31 0.0011 32.5 4.5 51 426-490 41-95 (258)
186 2a9o_A Response regulator; ess 36.0 1.1E+02 0.0036 23.6 7.2 14 241-254 40-53 (120)
187 1g3q_A MIND ATPase, cell divis 35.1 44 0.0015 30.3 5.2 39 145-186 2-41 (237)
188 3tqq_A Methionyl-tRNA formyltr 35.0 88 0.003 30.4 7.5 19 237-255 71-89 (314)
189 3r6d_A NAD-dependent epimerase 34.9 50 0.0017 29.5 5.5 35 143-184 3-38 (221)
190 2oqr_A Sensory transduction pr 34.7 84 0.0029 28.0 7.1 31 144-182 4-34 (230)
191 2hna_A Protein MIOC, flavodoxi 34.6 31 0.0011 29.0 3.8 37 144-183 1-37 (147)
192 3e5n_A D-alanine-D-alanine lig 34.5 34 0.0012 34.4 4.6 49 135-186 13-64 (386)
193 3heb_A Response regulator rece 34.5 1.8E+02 0.0063 23.5 11.3 62 426-489 59-133 (152)
194 3u7i_A FMN-dependent NADH-azor 34.5 79 0.0027 28.9 6.8 44 143-187 3-52 (223)
195 3ist_A Glutamate racemase; str 34.0 3E+02 0.01 25.8 11.6 35 145-185 6-40 (269)
196 1s8n_A Putative antiterminator 34.0 1.2E+02 0.004 26.5 7.8 30 143-180 12-41 (205)
197 1e4e_A Vancomycin/teicoplanin 33.7 36 0.0012 33.3 4.6 39 143-184 2-43 (343)
198 1hyq_A MIND, cell division inh 33.7 48 0.0016 30.7 5.3 38 146-186 4-41 (263)
199 3zq6_A Putative arsenical pump 33.7 52 0.0018 32.0 5.7 38 145-185 14-51 (324)
200 2an1_A Putative kinase; struct 33.3 59 0.002 31.0 6.0 55 422-490 59-118 (292)
201 4eg0_A D-alanine--D-alanine li 33.1 41 0.0014 32.4 4.8 38 143-183 12-52 (317)
202 2rdm_A Response regulator rece 33.0 99 0.0034 24.3 6.6 33 142-182 3-35 (132)
203 3jvi_A Protein tyrosine phosph 32.6 51 0.0017 28.6 4.9 40 143-183 3-42 (161)
204 2pln_A HP1043, response regula 32.5 1.9E+02 0.0063 22.9 9.2 35 140-182 14-48 (137)
205 3afo_A NADH kinase POS5; alpha 32.5 57 0.0019 32.8 5.8 56 421-490 109-170 (388)
206 3fni_A Putative diflavin flavo 32.4 88 0.003 26.7 6.4 40 143-185 3-42 (159)
207 3qk7_A Transcriptional regulat 32.4 3E+02 0.01 25.3 17.6 154 238-417 57-223 (294)
208 1iu8_A Pyrrolidone-carboxylate 32.3 81 0.0028 28.6 6.3 28 145-172 1-29 (206)
209 2cwd_A Low molecular weight ph 32.1 59 0.002 28.1 5.2 30 142-172 2-31 (161)
210 2ph1_A Nucleotide-binding prot 31.8 61 0.0021 30.1 5.7 40 144-186 17-57 (262)
211 3rof_A Low molecular weight pr 31.6 72 0.0025 27.6 5.6 30 142-172 4-33 (158)
212 1jkx_A GART;, phosphoribosylgl 31.6 2.3E+02 0.0078 25.6 9.4 20 236-255 69-88 (212)
213 2vvt_A Glutamate racemase; iso 31.5 2.7E+02 0.0092 26.4 10.4 35 144-184 24-58 (290)
214 1t5b_A Acyl carrier protein ph 31.4 87 0.003 27.4 6.5 42 144-186 1-45 (201)
215 1pfk_A Phosphofructokinase; tr 31.1 3.7E+02 0.013 26.0 13.1 36 144-182 2-38 (320)
216 1u2p_A Ptpase, low molecular w 31.1 54 0.0018 28.4 4.8 30 142-172 2-31 (163)
217 3h5o_A Transcriptional regulat 31.0 3.5E+02 0.012 25.6 16.6 39 143-184 61-100 (339)
218 1zuw_A Glutamate racemase 1; ( 30.9 2.9E+02 0.0099 25.8 10.4 34 145-184 4-37 (272)
219 3l49_A ABC sugar (ribose) tran 30.9 3.1E+02 0.011 25.0 15.5 40 142-184 3-43 (291)
220 4hs4_A Chromate reductase; tri 30.8 32 0.0011 31.0 3.4 42 141-185 3-46 (199)
221 1ykg_A SIR-FP, sulfite reducta 30.5 35 0.0012 29.6 3.5 39 143-184 8-46 (167)
222 2dwc_A PH0318, 433AA long hypo 30.5 1.3E+02 0.0044 30.2 8.3 34 143-185 18-51 (433)
223 3hzh_A Chemotaxis response reg 30.5 2.2E+02 0.0077 23.2 10.1 62 427-490 84-156 (157)
224 3miz_A Putative transcriptiona 30.4 2.5E+02 0.0084 26.0 10.0 157 238-418 62-234 (301)
225 3q9l_A Septum site-determining 30.4 55 0.0019 30.1 5.1 40 144-186 1-41 (260)
226 1k66_A Phytochrome response re 30.2 2.1E+02 0.0071 22.8 10.8 89 400-490 24-137 (149)
227 1fy2_A Aspartyl dipeptidase; s 30.0 1.8E+02 0.0061 26.6 8.5 54 399-454 54-121 (229)
228 3f2v_A General stress protein 29.9 24 0.00083 31.7 2.3 39 144-185 1-39 (192)
229 2lpm_A Two-component response 29.9 60 0.002 26.7 4.6 21 240-260 47-69 (123)
230 1jx7_A Hypothetical protein YC 29.5 89 0.0031 24.7 5.6 38 144-181 1-41 (117)
231 4b4o_A Epimerase family protei 29.4 38 0.0013 32.1 3.8 32 145-184 1-32 (298)
232 1e2b_A Enzyme IIB-cellobiose; 29.4 54 0.0019 26.2 4.1 34 142-180 1-35 (106)
233 3pg5_A Uncharacterized protein 29.4 49 0.0017 32.8 4.7 39 145-186 1-40 (361)
234 3ug7_A Arsenical pump-driving 29.4 67 0.0023 31.6 5.7 40 143-185 24-63 (349)
235 3svl_A Protein YIEF; E. coli C 29.3 31 0.0011 30.9 3.0 41 142-185 2-44 (193)
236 1tvm_A PTS system, galactitol- 29.2 69 0.0023 25.9 4.8 34 141-179 18-53 (113)
237 3dfz_A SIRC, precorrin-2 dehyd 29.0 2.2E+02 0.0077 25.9 8.9 101 385-490 54-166 (223)
238 2bw0_A 10-FTHFDH, 10-formyltet 28.8 2.3E+02 0.0078 27.6 9.4 19 237-255 90-108 (329)
239 3igf_A ALL4481 protein; two-do 28.6 45 0.0015 33.4 4.3 38 144-184 1-38 (374)
240 1ehi_A LMDDL2, D-alanine:D-lac 28.2 66 0.0023 31.9 5.5 39 143-185 2-45 (377)
241 1qv9_A F420-dependent methylen 28.1 55 0.0019 30.4 4.2 39 435-475 79-118 (283)
242 1d4a_A DT-diaphorase, quinone 28.1 93 0.0032 29.3 6.3 41 144-187 2-44 (273)
243 3k9c_A Transcriptional regulat 28.1 3.5E+02 0.012 24.8 15.1 148 242-418 62-222 (289)
244 2i87_A D-alanine-D-alanine lig 28.1 39 0.0013 33.3 3.8 40 143-185 2-44 (364)
245 1ccw_A Protein (glutamate muta 28.0 1.3E+02 0.0045 25.0 6.6 36 143-182 2-38 (137)
246 1d1q_A Tyrosine phosphatase (E 28.0 82 0.0028 27.2 5.4 31 141-172 4-34 (161)
247 3mc3_A DSRE/DSRF-like family p 28.0 95 0.0033 25.8 5.7 37 143-182 14-52 (134)
248 3dfi_A Pseudoaglycone deacetyl 28.0 3.7E+02 0.013 25.0 12.0 23 233-255 132-154 (270)
249 3u7r_A NADPH-dependent FMN red 27.9 41 0.0014 30.1 3.5 41 143-185 1-41 (190)
250 3k3p_A D-alanine--D-alanine li 27.9 49 0.0017 33.2 4.4 44 139-185 32-78 (383)
251 1weh_A Conserved hypothetical 27.9 68 0.0023 28.1 4.9 62 419-487 90-170 (171)
252 1wcv_1 SOJ, segregation protei 27.8 61 0.0021 30.0 4.9 39 144-185 5-44 (257)
253 1mkz_A Molybdenum cofactor bio 27.6 2E+02 0.0068 24.9 8.0 37 142-181 8-46 (172)
254 1a9x_A Carbamoyl phosphate syn 27.5 62 0.0021 37.3 5.8 40 142-184 5-49 (1073)
255 2m1z_A LMO0427 protein; homolo 27.5 1.1E+02 0.0036 24.7 5.5 36 144-182 2-39 (106)
256 3k9g_A PF-32 protein; ssgcid, 27.4 46 0.0016 31.0 4.0 38 144-185 26-64 (267)
257 3qjg_A Epidermin biosynthesis 27.2 50 0.0017 29.2 3.9 35 143-182 4-38 (175)
258 3out_A Glutamate racemase; str 27.1 3.9E+02 0.013 25.0 11.5 38 141-184 4-41 (268)
259 3e3m_A Transcriptional regulat 26.9 4.2E+02 0.014 25.2 18.6 39 143-184 69-108 (355)
260 3lua_A Response regulator rece 26.8 2.2E+02 0.0074 22.6 7.8 62 427-490 51-126 (140)
261 1jr2_A Uroporphyrinogen-III sy 26.6 3.9E+02 0.013 24.8 11.1 59 426-490 210-281 (286)
262 3kjx_A Transcriptional regulat 26.2 4.2E+02 0.014 25.0 15.9 39 143-184 67-106 (344)
263 3ius_A Uncharacterized conserv 26.2 64 0.0022 30.0 4.8 33 143-184 4-36 (286)
264 4a3s_A 6-phosphofructokinase; 26.1 4.5E+02 0.015 25.3 12.3 36 144-182 1-37 (319)
265 3end_A Light-independent proto 26.1 77 0.0026 30.2 5.4 43 141-186 37-79 (307)
266 3iqw_A Tail-anchored protein t 26.0 68 0.0023 31.5 5.0 40 143-185 14-53 (334)
267 2r85_A PURP protein PF1517; AT 25.8 47 0.0016 32.0 3.8 32 144-185 2-33 (334)
268 2hy5_A Putative sulfurtransfer 25.8 1.1E+02 0.0036 25.2 5.5 32 145-179 1-34 (130)
269 2jba_A Phosphate regulon trans 25.8 87 0.003 24.5 5.0 30 144-181 2-31 (127)
270 2fek_A Low molecular weight pr 25.6 61 0.0021 28.3 4.1 32 138-170 16-47 (167)
271 3gpi_A NAD-dependent epimerase 25.5 60 0.0021 30.3 4.4 35 142-185 1-35 (286)
272 1gsa_A Glutathione synthetase; 25.4 38 0.0013 32.2 3.0 37 145-185 2-41 (316)
273 1u0t_A Inorganic polyphosphate 25.3 60 0.0021 31.3 4.4 54 423-490 72-130 (307)
274 2ejb_A Probable aromatic acid 25.1 96 0.0033 27.7 5.4 33 145-182 2-34 (189)
275 3qha_A Putative oxidoreductase 25.0 43 0.0015 32.0 3.3 43 135-186 6-48 (296)
276 3rh0_A Arsenate reductase; oxi 24.8 69 0.0024 27.4 4.2 29 142-171 18-46 (148)
277 2hpv_A FMN-dependent NADH-azor 24.5 1.2E+02 0.0042 26.8 6.2 41 144-185 1-45 (208)
278 3pdi_A Nitrogenase MOFE cofact 24.5 2.3E+02 0.0079 29.2 9.0 33 236-277 391-423 (483)
279 3lyu_A Putative hydrogenase; t 24.4 3E+02 0.01 22.7 11.6 33 144-182 18-50 (142)
280 3u3x_A Oxidoreductase; structu 24.4 2E+02 0.0068 28.1 8.2 24 238-261 80-103 (361)
281 4fb5_A Probable oxidoreductase 24.3 2.4E+02 0.0083 27.3 9.0 32 238-269 86-118 (393)
282 3tem_A Ribosyldihydronicotinam 24.2 1.2E+02 0.004 27.8 6.0 40 144-186 1-42 (228)
283 3of5_A Dethiobiotin synthetase 24.1 93 0.0032 28.5 5.3 36 144-182 4-39 (228)
284 1meo_A Phosophoribosylglycinam 23.9 3.9E+02 0.013 23.9 9.7 20 236-255 69-88 (209)
285 2l17_A Synarsc, arsenate reduc 23.9 76 0.0026 26.4 4.3 27 144-171 4-30 (134)
286 1qkk_A DCTD, C4-dicarboxylate 23.7 2.9E+02 0.0099 22.3 9.4 62 427-490 48-120 (155)
287 3r5x_A D-alanine--D-alanine li 23.7 73 0.0025 30.2 4.7 39 143-184 2-43 (307)
288 3n8i_A Low molecular weight ph 23.7 97 0.0033 26.6 5.0 30 142-172 3-32 (157)
289 3cwq_A Para family chromosome 23.5 99 0.0034 27.6 5.3 38 145-186 1-38 (209)
290 4gqa_A NAD binding oxidoreduct 23.3 2.1E+02 0.0071 28.4 8.3 32 238-269 88-120 (412)
291 3fvw_A Putative NAD(P)H-depend 23.3 92 0.0032 27.5 5.0 38 144-185 2-41 (192)
292 3pfn_A NAD kinase; structural 23.2 59 0.002 32.4 3.9 118 346-490 34-163 (365)
293 1bvy_F Protein (cytochrome P45 23.1 73 0.0025 28.4 4.3 40 143-185 20-59 (191)
294 1e2b_A Enzyme IIB-cellobiose; 22.7 1E+02 0.0035 24.6 4.6 66 387-453 5-80 (106)
295 3u7q_A Nitrogenase molybdenum- 22.7 3.7E+02 0.013 27.7 10.1 33 237-278 408-440 (492)
296 3f6c_A Positive transcription 22.6 2.7E+02 0.0094 21.6 10.5 29 144-180 1-29 (134)
297 2woo_A ATPase GET3; tail-ancho 22.6 93 0.0032 30.2 5.3 39 144-185 18-56 (329)
298 3kcn_A Adenylate cyclase homol 22.6 3E+02 0.01 22.1 11.7 65 428-495 50-126 (151)
299 1fmt_A Methionyl-tRNA FMet for 22.4 3.6E+02 0.012 25.9 9.4 19 237-255 72-90 (314)
300 3ic5_A Putative saccharopine d 22.4 1.3E+02 0.0044 23.2 5.3 33 143-184 4-37 (118)
301 3i12_A D-alanine-D-alanine lig 22.4 75 0.0026 31.3 4.6 41 142-185 1-44 (364)
302 1jf8_A Arsenate reductase; ptp 22.3 99 0.0034 25.6 4.6 26 144-170 3-28 (131)
303 1t4y_A Adaptive-response senso 22.2 3E+02 0.01 22.0 7.4 43 143-186 11-54 (105)
304 3n7t_A Macrophage binding prot 22.2 1E+02 0.0034 28.8 5.1 39 144-185 9-57 (247)
305 2hy5_B Intracellular sulfur ox 22.1 1.5E+02 0.0051 24.8 5.7 34 144-180 5-40 (136)
306 3ilh_A Two component response 22.1 2.9E+02 0.01 21.7 11.4 62 427-490 61-138 (146)
307 3s2u_A UDP-N-acetylglucosamine 22.1 2.9E+02 0.01 26.8 9.0 28 426-453 92-122 (365)
308 3h5t_A Transcriptional regulat 22.1 4E+02 0.014 25.5 10.0 74 238-324 120-197 (366)
309 3en0_A Cyanophycinase; serine 22.1 1.6E+02 0.0053 28.3 6.6 98 351-454 27-153 (291)
310 3kke_A LACI family transcripti 22.0 4.7E+02 0.016 24.1 16.2 153 238-418 63-234 (303)
311 3u9t_A MCC alpha, methylcroton 21.9 1.9E+02 0.0065 31.3 8.0 34 142-184 26-59 (675)
312 3pdi_B Nitrogenase MOFE cofact 21.8 2.2E+02 0.0077 29.0 8.2 34 237-279 366-399 (458)
313 1jl3_A Arsenate reductase; alp 21.8 90 0.0031 26.1 4.3 26 144-170 3-28 (139)
314 1g63_A Epidermin modifying enz 21.6 63 0.0021 28.7 3.4 35 143-182 1-35 (181)
315 1b73_A Glutamate racemase; iso 21.6 2.8E+02 0.0097 25.5 8.3 35 145-185 1-35 (254)
316 4dim_A Phosphoribosylglycinami 21.6 79 0.0027 31.4 4.6 36 140-184 3-38 (403)
317 1lss_A TRK system potassium up 21.5 1.2E+02 0.004 24.4 5.0 32 144-184 4-35 (140)
318 3lp8_A Phosphoribosylamine-gly 21.5 2.6E+02 0.0089 28.2 8.6 18 236-253 73-90 (442)
319 1rtt_A Conserved hypothetical 21.4 59 0.002 28.7 3.2 41 142-185 4-45 (193)
320 2qsj_A DNA-binding response re 21.4 3.2E+02 0.011 21.9 9.9 62 427-490 51-123 (154)
321 2fzv_A Putative arsenical resi 21.3 1.4E+02 0.0049 28.3 6.1 42 142-186 56-99 (279)
322 3bfv_A CAPA1, CAPB2, membrane 21.2 1.4E+02 0.0048 28.0 6.1 38 145-185 82-120 (271)
323 2dwu_A Glutamate racemase; iso 21.2 3.8E+02 0.013 25.0 9.2 35 144-184 7-41 (276)
324 2rgy_A Transcriptional regulat 21.1 4.7E+02 0.016 23.8 13.3 40 142-184 6-46 (290)
325 2dzd_A Pyruvate carboxylase; b 20.9 90 0.0031 31.8 5.0 35 142-185 4-38 (461)
326 2pln_A HP1043, response regula 20.8 3.1E+02 0.01 21.5 11.0 62 427-490 63-132 (137)
327 2afh_E Nitrogenase iron protei 20.7 1E+02 0.0036 28.9 5.1 38 145-186 3-40 (289)
328 4em8_A Ribose 5-phosphate isom 20.6 1.2E+02 0.004 26.1 4.7 34 141-180 4-37 (148)
329 4fu0_A D-alanine--D-alanine li 20.6 87 0.003 30.8 4.6 41 142-185 1-44 (357)
330 1hdo_A Biliverdin IX beta redu 20.5 1.4E+02 0.0047 25.8 5.6 33 145-185 4-36 (206)
331 3hbl_A Pyruvate carboxylase; T 20.5 1.6E+02 0.0055 34.2 7.3 36 142-186 2-37 (1150)
332 4etn_A LMPTP, low molecular we 20.4 1.2E+02 0.004 27.0 5.0 38 143-183 33-70 (184)
333 3l6d_A Putative oxidoreductase 20.3 1.1E+02 0.0038 29.3 5.2 39 138-185 3-41 (306)
334 3enk_A UDP-glucose 4-epimerase 20.3 1.3E+02 0.0043 28.8 5.7 35 143-185 4-38 (341)
335 3qxc_A Dethiobiotin synthetase 20.3 1.2E+02 0.0042 28.1 5.3 37 143-182 19-56 (242)
336 2d1p_B TUSC, hypothetical UPF0 20.2 84 0.0029 25.5 3.7 38 144-182 1-40 (119)
337 3e03_A Short chain dehydrogena 20.2 5E+02 0.017 23.7 12.5 35 145-186 6-40 (274)
338 4hb9_A Similarities with proba 20.2 75 0.0026 31.2 4.1 33 144-185 1-33 (412)
339 2yrx_A Phosphoribosylglycinami 20.1 1.6E+02 0.0055 29.7 6.7 33 143-183 20-52 (451)
340 3l6u_A ABC-type sugar transpor 20.1 4.9E+02 0.017 23.6 14.8 40 142-184 6-46 (293)
341 1ulz_A Pyruvate carboxylase N- 20.0 64 0.0022 32.8 3.6 32 144-184 2-33 (451)
342 3k5i_A Phosphoribosyl-aminoimi 20.0 1.3E+02 0.0044 30.1 5.8 34 141-183 21-54 (403)
343 3u3x_A Oxidoreductase; structu 20.0 3.5E+02 0.012 26.2 9.1 65 384-454 49-120 (361)
344 3fgn_A Dethiobiotin synthetase 20.0 1.3E+02 0.0045 28.0 5.5 35 145-182 26-61 (251)
No 1
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.4e-32 Score=284.77 Aligned_cols=341 Identities=19% Similarity=0.231 Sum_probs=241.7
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe-ecccc------cCCCCCCcchhHHHHHHhhccccceeec
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT-DLWSD------HTPWPFNQLPRSYNFLVKHGPLWKMTYY 215 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~-~~~~~------~~~~~~~~~~~~y~~~~~~~~l~~~~~~ 215 (536)
|++||+|.++|| |||..++++||++|+++ |++|..+ +...- ..++++..++... + +....+.
T Consensus 1 M~~~i~i~~GGT-gGHi~palala~~L~~~---g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~--~-~~~~~~~---- 69 (365)
T 3s2u_A 1 MKGNVLIMAGGT-GGHVFPALACAREFQAR---GYAVHWLGTPRGIENDLVPKAGLPLHLIQVSG--L-RGKGLKS---- 69 (365)
T ss_dssp --CEEEEECCSS-HHHHHHHHHHHHHHHHT---TCEEEEEECSSSTHHHHTGGGTCCEEECC------------------
T ss_pred CCCcEEEEcCCC-HHHHHHHHHHHHHHHhC---CCEEEEEECCchHhhchhhhcCCcEEEEECCC--c-CCCCHHH----
Confidence 457999999999 79999999999999999 8888654 32110 1111111111100 0 0000000
Q ss_pred CCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC-ccccccccc
Q 036427 216 GTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST-CHPTWFHKL 294 (536)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-~~~~~~~~~ 294 (536)
. ... .........+..+++++++||+|++++.+.+.....+++..| +|++.+..+... ...+|+.++
T Consensus 70 -----~-~~~--~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~----iP~vihe~n~~~G~~nr~l~~~ 137 (365)
T 3s2u_A 70 -----L-VKA--PLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNG----VPLVIHEQNAVAGTANRSLAPI 137 (365)
T ss_dssp ---------C--HHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTT----CCEEEEECSSSCCHHHHHHGGG
T ss_pred -----H-HHH--HHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcC----CCEEEEecchhhhhHHHhhccc
Confidence 0 000 111122234667889999999999999877654455566665 898755444321 234678899
Q ss_pred CCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHH
Q 036427 295 VTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGN 374 (536)
Q Consensus 295 ~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~ 374 (536)
++.+++..+.. .....++.++|+|++++++.... ..++++++++.++++||+.+...+.+.+..+..
T Consensus 138 a~~v~~~~~~~-------~~~~~k~~~~g~pvr~~~~~~~~------~~~~~~~~~~~ilv~gGs~g~~~~~~~~~~al~ 204 (365)
T 3s2u_A 138 ARRVCEAFPDT-------FPASDKRLTTGNPVRGELFLDAH------ARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALA 204 (365)
T ss_dssp CSEEEESSTTS-------SCC---CEECCCCCCGGGCCCTT------SSCCCTTSCCEEEECCTTTTCSHHHHHHHHHHH
T ss_pred cceeeeccccc-------ccCcCcEEEECCCCchhhccchh------hhcccCCCCcEEEEECCcCCccccchhhHHHHH
Confidence 99998877643 12346778999999987765432 234567788999999999998887776665555
Q ss_pred HhhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEe
Q 036427 375 ALYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILN 452 (536)
Q Consensus 375 ~l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~ 452 (536)
.+. ...+..+++++|.+. ...+.+++. ..++.+.+|+++|.++|+.||++|+.+|++|+.|+|++|+|+|++
T Consensus 205 ~l~----~~~~~~vi~~~G~~~~~~~~~~~~~~--~~~~~v~~f~~dm~~~l~~aDlvI~raG~~Tv~E~~a~G~P~Ili 278 (365)
T 3s2u_A 205 QVP----LEIRPAIRHQAGRQHAEITAERYRTV--AVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLV 278 (365)
T ss_dssp TSC----TTTCCEEEEECCTTTHHHHHHHHHHT--TCCCEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred hcc----cccceEEEEecCccccccccceeccc--ccccccccchhhhhhhhccceEEEecCCcchHHHHHHhCCCeEEe
Confidence 443 234566778888764 334444443 357889999999999999999999999999999999999999999
Q ss_pred ccC---CccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 453 DFI---AGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 453 ~~~---~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|.+ .++|..|++.+++.|.+.+++ +++.|+++|.++++ ||+.+++|++++++++..+++++|++.|+++.++
T Consensus 279 p~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~-d~~~~~~m~~~a~~~~~~~aa~~ia~~i~~larG 357 (365)
T 3s2u_A 279 PLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLM-HPETLRSMADQARSLAKPEATRTVVDACLEVARG 357 (365)
T ss_dssp C-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHH-CTHHHHHHHHHHHHTCCTTHHHHHHHHHHHHC--
T ss_pred ccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHcc
Confidence 875 357777999999999999885 68999999999999 9999999999999999999999999999998876
Q ss_pred c
Q 036427 526 R 526 (536)
Q Consensus 526 ~ 526 (536)
-
T Consensus 358 ~ 358 (365)
T 3s2u_A 358 L 358 (365)
T ss_dssp -
T ss_pred c
Confidence 3
No 2
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.98 E-value=6.1e-30 Score=263.31 Aligned_cols=338 Identities=19% Similarity=0.258 Sum_probs=235.5
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhc-cccceeecCCCccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHG-PLWKMTYYGTAPRVIH 223 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~-~l~~~~~~~~~~~~~~ 223 (536)
|||++++.+. |||..++..|+++|.++ |++|.+++..... .. ....+.+ +...............
T Consensus 7 mkIl~~~~~~-gG~~~~~~~la~~L~~~---G~~V~v~~~~~~~--------~~--~~~~~~g~~~~~~~~~~~~~~~~~ 72 (364)
T 1f0k_A 7 KRLMVMAGGT-GGHVFPGLAVAHHLMAQ---GWQVRWLGTADRM--------EA--DLVPKHGIEIDFIRISGLRGKGIK 72 (364)
T ss_dssp CEEEEECCSS-HHHHHHHHHHHHHHHTT---TCEEEEEECTTST--------HH--HHGGGGTCEEEECCCCCCTTCCHH
T ss_pred cEEEEEeCCC-ccchhHHHHHHHHHHHc---CCEEEEEecCCcc--------hh--hhccccCCceEEecCCccCcCccH
Confidence 8999999888 69999999999999998 7888777543210 00 0011111 1111000000000000
Q ss_pred chh-hhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCC-CcccccccccCCEEEEc
Q 036427 224 QSN-FAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLS-TCHPTWFHKLVTRCYCP 301 (536)
Q Consensus 224 ~~~-~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~-~~~~~~~~~~~d~vi~~ 301 (536)
... ..........++.+++++.+||+||++++........+++..+ +|++...++.. ....+|+.+.+|.+++.
T Consensus 73 ~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~----~p~v~~~~~~~~~~~~~~~~~~~d~v~~~ 148 (364)
T 1f0k_A 73 ALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLG----IPVVLHEQNGIAGLTNKWLAKIATKVMQA 148 (364)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTT----CCEEEEECSSSCCHHHHHHTTTCSEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcC----CCEEEEecCCCCcHHHHHHHHhCCEEEec
Confidence 000 0011222346778889999999999998654332233445444 88886666532 23446778899999998
Q ss_pred CHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHH-HHHHHHhhhcc
Q 036427 302 TADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATA-RALGNALYDEN 380 (536)
Q Consensus 302 S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l-~al~~~l~~~~ 380 (536)
++.. ++ ++.++|||+++..+.+.. .+++++++++.+++++++|+...++..+.+ +++ +.+.
T Consensus 149 ~~~~--------~~--~~~~i~n~v~~~~~~~~~----~~~~~~~~~~~~~il~~~g~~~~~k~~~~li~a~-~~l~--- 210 (364)
T 1f0k_A 149 FPGA--------FP--NAEVVGNPVRTDVLALPL----PQQRLAGREGPVRVLVVGGSQGARILNQTMPQVA-AKLG--- 210 (364)
T ss_dssp STTS--------SS--SCEECCCCCCHHHHTSCC----HHHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHH-HHHG---
T ss_pred Chhh--------cC--CceEeCCccchhhcccch----hhhhcccCCCCcEEEEEcCchHhHHHHHHHHHHH-HHhc---
Confidence 8654 23 578999999877654322 245677777777788888776654444433 433 3332
Q ss_pred cCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCC--
Q 036427 381 LGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA-- 456 (536)
Q Consensus 381 ~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~-- 456 (536)
. +.++++++|.++ ++.+.+++.++ ++|+|.|+++++.++|+.||++|+||||++++|||++|+|||+++.++
T Consensus 211 --~-~~~~l~i~G~~~~~~l~~~~~~~~~-~~v~~~g~~~~~~~~~~~ad~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~ 286 (364)
T 1f0k_A 211 --D-SVTIWHQSGKGSQQSVEQAYAEAGQ-PQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKD 286 (364)
T ss_dssp --G-GEEEEEECCTTCHHHHHHHHHHTTC-TTSEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECCCCCTT
T ss_pred --C-CcEEEEEcCCchHHHHHHHHhhcCC-CceEEecchhhHHHHHHhCCEEEECCchHHHHHHHHhCCCEEEeeCCCCc
Confidence 1 466677788875 34455555554 479999999999999999999999999999999999999999999865
Q ss_pred ccccCChhhHhhCCceeecC--C--HHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 457 GQEAGNVPYVVENGCGKFSK--S--PKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 457 ~~e~~na~~lv~~g~g~~~~--d--~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
+++..++..+++.|.|.+++ | +++|+++|.++ |++.+++|++++++++..++++++++.++++++.
T Consensus 287 ~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 287 RQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW---SRETLLTMAERARAASIPDATERVANEVSRVARA 356 (364)
T ss_dssp CHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc---CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHH
Confidence 34445677899999988886 4 89999999998 5899999999999999999999999999998875
No 3
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.97 E-value=3.6e-29 Score=264.00 Aligned_cols=358 Identities=14% Similarity=0.089 Sum_probs=241.4
Q ss_pred CCCCCceEEEEeCC----------CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccc
Q 036427 140 ENDQPKKVLILMSD----------TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPL 209 (536)
Q Consensus 140 ~~~~~mKIL~~~~~----------~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l 209 (536)
..++||||||++.. ..||+...+..|+++|.+. |++|.++............... .....
T Consensus 16 ~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~---G~~V~v~~~~~~~~~~~~~~~~-------~~v~v 85 (438)
T 3c48_A 16 PRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQ---GIEVDIYTRATRPSQGEIVRVA-------ENLRV 85 (438)
T ss_dssp ---CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHT---TCEEEEEEECCCGGGCSEEEEE-------TTEEE
T ss_pred cCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhc---CCEEEEEecCCCCCCccccccc-------CCeEE
Confidence 34677899999852 1389999999999999998 7788776543211000000000 00000
Q ss_pred cceeecCCCcccccchhhhhhhHHHHHHHHHH-HHhh-CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc
Q 036427 210 WKMTYYGTAPRVIHQSNFAATSTFIAREVAKG-LMKY-QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH 287 (536)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~-kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~ 287 (536)
....... ........... ....+.+.+.+. +++. +||+||++......+...+++..+ +|++...|+.....
T Consensus 86 ~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~----~p~v~~~h~~~~~~ 159 (438)
T 3c48_A 86 INIAAGP-YEGLSKEELPT-QLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWR----IPLIHTAHTLAAVK 159 (438)
T ss_dssp EEECCSC-SSSCCGGGGGG-GHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHT----CCEEEECSSCHHHH
T ss_pred EEecCCC-ccccchhHHHH-HHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcC----CCEEEEecCCcccc
Confidence 1100000 00000000000 111122334444 5555 499999986433222333444444 88887777653110
Q ss_pred ------------------cccccccCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCC--chHHHHHHcCC
Q 036427 288 ------------------PTWFHKLVTRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVR--PKVELRRELGM 346 (536)
Q Consensus 288 ------------------~~~~~~~~d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~--~~~~~r~~lgi 346 (536)
.+++.+.+|.++++|+..++.+.+ +|++..++.+++|+++...+.+.. ..+.+++++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~ 239 (438)
T 3c48_A 160 NSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGI 239 (438)
T ss_dssp SCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTTC
T ss_pred cccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHhcCC
Confidence 123457799999999999999887 788888999999999988765542 12348889999
Q ss_pred CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCC--CcEEEEEecC----CH---HHHHHHHcCCCCCCEEEecCh
Q 036427 347 DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEP--IGQVLVICGR----NK---KLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 347 ~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~--~~~~lvi~G~----~~---~l~~~l~~~~~~~~V~~~G~v 417 (536)
+++.++++++|+....|+...+++++..... ..| ++++ +++|. ++ ++.+.++++++.++|.+.|++
T Consensus 240 ~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~----~~p~~~~~l-~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~ 314 (438)
T 3c48_A 240 PLHTKVVAFVGRLQPFKGPQVLIKAVAALFD----RDPDRNLRV-IICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPR 314 (438)
T ss_dssp CSSSEEEEEESCBSGGGCHHHHHHHHHHHHH----HCTTCSEEE-EEECCBC------CHHHHHHHHTTCTTTEEEECCC
T ss_pred CCCCcEEEEEeeecccCCHHHHHHHHHHHHh----hCCCcceEE-EEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCC
Confidence 8888888899887777888877777765443 133 5665 44565 33 466677777888899999999
Q ss_pred --hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeecC--CHHHHHHHHHHH
Q 036427 418 --SKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFSK--SPKEIANMVSQW 488 (536)
Q Consensus 418 --~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~~--d~~~La~~I~~l 488 (536)
+++.++|+.||++|+|| | |++++|||++|+|||+++.++.. .+++ .+.|.+++ |+++++++|.++
T Consensus 315 ~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~------e~i~~~~~g~~~~~~d~~~la~~i~~l 388 (438)
T 3c48_A 315 PPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLP------IAVAEGETGLLVDGHSPHAWADALATL 388 (438)
T ss_dssp CHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHH------HHSCBTTTEEEESSCCHHHHHHHHHHH
T ss_pred ChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChh------HHhhCCCcEEECCCCCHHHHHHHHHHH
Confidence 68999999999999998 4 89999999999999999864433 3444 44677765 899999999999
Q ss_pred hCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 489 FGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 489 l~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
++ +++.+++|++++++.+.+++++++++.+.+++++
T Consensus 389 ~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 424 (438)
T 3c48_A 389 LD-DDETRIRMGEDAVEHARTFSWAATAAQLSSLYND 424 (438)
T ss_dssp HH-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99 9999999999999988779999988888776654
No 4
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.97 E-value=1.7e-30 Score=279.68 Aligned_cols=366 Identities=13% Similarity=0.106 Sum_probs=244.7
Q ss_pred CCCCCCCceEEEEeCC--------------CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCC-Cc-chhHHH
Q 036427 138 GIENDQPKKVLILMSD--------------TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPF-NQ-LPRSYN 201 (536)
Q Consensus 138 ~~~~~~~mKIL~~~~~--------------~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~-~~-~~~~y~ 201 (536)
|++|.++||||+++.. ..||..+.+..|+++|.+. ||+|.|+........++. .. ... +.
T Consensus 1 m~~m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~---G~~V~v~~~~~~~~~~~~~~~~~~~-~~ 76 (499)
T 2r60_A 1 MVEMTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEM---GVQVDIITRRIKDENWPEFSGEIDY-YQ 76 (499)
T ss_dssp ------CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHT---TCEEEEEEECCCBTTBGGGCCSEEE-CT
T ss_pred CccccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhc---CCeEEEEeCCCCcccccchhhhHHh-cc
Confidence 5667778999999853 1379999999999999998 788877654221111000 00 000 00
Q ss_pred HHHhhccccceeecCCCcccccchhhhhhhHHHHHHHHHHHHh--hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEE
Q 036427 202 FLVKHGPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMK--YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTV 279 (536)
Q Consensus 202 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~ 279 (536)
.....+........ ...................+.+++++ .+||+||++......++..+++..+ +|++..
T Consensus 77 -~~~gv~v~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~----~p~v~~ 149 (499)
T 2r60_A 77 -ETNKVRIVRIPFGG--DKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKG----LPFTFT 149 (499)
T ss_dssp -TCSSEEEEEECCSC--SSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHC----CCEEEE
T ss_pred -CCCCeEEEEecCCC--cCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcC----CcEEEE
Confidence 00000011110000 00000000011111223567778887 5899999987543333333445445 888877
Q ss_pred ecCCCCc----------------------c----cccccccCCEEEEcCHHHHHHHHHh---C-C----CCCCEEEeCCC
Q 036427 280 ITDLSTC----------------------H----PTWFHKLVTRCYCPTADVAKRAMKA---G-L----QASQIKVYGLP 325 (536)
Q Consensus 280 ~~d~~~~----------------------~----~~~~~~~~d~vi~~S~~~~~~l~~~---g-~----~~~ki~vignp 325 (536)
.|+.... . .+++.+.+|.++++|+..++.+.+. | + ++.++.+++|+
T Consensus 150 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ng 229 (499)
T 2r60_A 150 GHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPG 229 (499)
T ss_dssp CSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCC
T ss_pred ccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCC
Confidence 7765210 0 0234578999999999999987764 6 6 67899999999
Q ss_pred CCCCCCCCCCc---hHHHHHHcC-----CCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecC---
Q 036427 326 VRPSFVKPVRP---KVELRRELG-----MDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGR--- 394 (536)
Q Consensus 326 v~~~~~~~~~~---~~~~r~~lg-----i~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~--- 394 (536)
++...+.+... +..++++++ ++++.++++++|+....|+...+++++...... .++...++++|.
T Consensus 230 vd~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~----~~~~~~l~i~G~~~~ 305 (499)
T 2r60_A 230 VNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKEL----QDKANLVLTLRGIEN 305 (499)
T ss_dssp BCTTTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHH----HHHCEEEEEESSCSB
T ss_pred cChhhcCccchhhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHh----CCCceEEEEECCCCC
Confidence 99887765432 356788888 777888999999887788888887777654321 122323556666
Q ss_pred ---------------CHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhc----CeEEECC---C-hHHHHHHHHhCCcE
Q 036427 395 ---------------NKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGAC----DCIITKA---G-PGTIAEAMIRGLPI 449 (536)
Q Consensus 395 ---------------~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~a----Dv~V~~s---G-~~tllEAma~GlPV 449 (536)
..++.+.++++++.++|+|+|++ +++.++|+.| |++|+|| | |++++|||+||+||
T Consensus 306 ~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~Pv 385 (499)
T 2r60_A 306 PFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPA 385 (499)
T ss_dssp TTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCE
T ss_pred cccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCE
Confidence 22455666777888899999998 6999999999 9999998 4 89999999999999
Q ss_pred EEeccCCccccCChhhHhhCC-ceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHhh
Q 036427 450 ILNDFIAGQEAGNVPYVVENG-CGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARP-DAVFRIVQDLHELVRQ 525 (536)
Q Consensus 450 I~~~~~~~~e~~na~~lv~~g-~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~-~~~~~i~~~i~~l~~~ 525 (536)
|+++.++.. +++..+ .|.+++ |+++++++|.++++ +++.+++|++++++.+.+ ++++++++.+.+++++
T Consensus 386 I~s~~~g~~------e~v~~~~~g~l~~~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 458 (499)
T 2r60_A 386 VVTRNGGPA------EILDGGKYGVLVDPEDPEDIARGLLKAFE-SEETWSAYQEKGKQRVEERYTWQETARGYLEVIQE 458 (499)
T ss_dssp EEESSBHHH------HHTGGGTSSEEECTTCHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHH
T ss_pred EEecCCCHH------HHhcCCceEEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999854333 345444 677775 89999999999999 999999999999998877 8898888888776654
No 5
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.97 E-value=2.2e-28 Score=253.57 Aligned_cols=345 Identities=14% Similarity=0.090 Sum_probs=243.6
Q ss_pred CCCCceEEEEeCCC---CchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCC
Q 036427 141 NDQPKKVLILMSDT---GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGT 217 (536)
Q Consensus 141 ~~~~mKIL~~~~~~---GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~ 217 (536)
|+++|||++++... .||....+..|++.| + |++|.|+....... ....+ ..... .......
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~---g~~v~v~~~~~~~~------~~~~~---~~~~~-~~~~~~~- 64 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--D---PESIVVFASTQNAE------EAHAY---DKTLD-YEVIRWP- 64 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS--C---GGGEEEEEECSSHH------HHHHH---HTTCS-SEEEEES-
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh--c---CCeEEEEECCCCcc------chhhh---ccccc-eEEEEcc-
Confidence 56789999998632 489999999999999 3 55665554322100 00011 11111 1100000
Q ss_pred CcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCce-EEEEecCCCCc---------c
Q 036427 218 APRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIV-FTTVITDLSTC---------H 287 (536)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip-~v~~~~d~~~~---------~ 287 (536)
.... .........+.+++++.+||+||++.+........+++..+ +| ++...|+.... .
T Consensus 65 ~~~~-------~~~~~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~----~~~~i~~~h~~~~~~~~~~~~~~~ 133 (394)
T 3okp_A 65 RSVM-------LPTPTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAG----ASKVIASTHGHEVGWSMLPGSRQS 133 (394)
T ss_dssp SSSC-------CSCHHHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTT----CSEEEEECCSTHHHHTTSHHHHHH
T ss_pred cccc-------ccchhhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcC----CCcEEEEeccchhhhhhcchhhHH
Confidence 0000 01223456888899999999999987654433344456555 55 55555543210 0
Q ss_pred cccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCC--chHHHHHHcCCCCCCCEEEEecCCCCCCcH
Q 036427 288 PTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVR--PKVELRRELGMDEDLPAVLLMGGGEGMGPI 365 (536)
Q Consensus 288 ~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~--~~~~~r~~lgi~~~~~~il~~gg~~g~k~~ 365 (536)
.+++.+.+|.++++|+..++.+.+.+.+..++.+++|+++...+.+.. .+..++++++++++.++++++|+....|+.
T Consensus 134 ~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~ 213 (394)
T 3okp_A 134 LRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQ 213 (394)
T ss_dssp HHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTTCCEEEEESCSCGGGCH
T ss_pred HHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCCcCceEEEEEeccccccCH
Confidence 134567899999999999999988655668999999999988776532 346788999999888999999998777888
Q ss_pred HHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHc--CCCCCCEEEecCh--hhHHHHHhhcCeEEECC-------
Q 036427 366 EATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLS--TDWKIPVQVKGFV--SKMEEAMGACDCIITKA------- 434 (536)
Q Consensus 366 ~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~--~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s------- 434 (536)
..+++++..... ..+++++ +++|.++. .+.+++ .++.++|++.|++ +++.++|+.||++|+||
T Consensus 214 ~~li~a~~~l~~----~~~~~~l-~i~G~g~~-~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~ 287 (394)
T 3okp_A 214 DSLIKAMPQVIA----ARPDAQL-LIVGSGRY-ESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGL 287 (394)
T ss_dssp HHHHHHHHHHHH----HSTTCEE-EEECCCTT-HHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGT
T ss_pred HHHHHHHHHHHh----hCCCeEE-EEEcCchH-HHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCccccccc
Confidence 877777765443 2466765 45576651 122221 3455799999999 79999999999999975
Q ss_pred ----ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC
Q 036427 435 ----GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLAR 508 (536)
Q Consensus 435 ----G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~ 508 (536)
+|++++|||++|+|||+++.++..+ +++.+.|.+++ |+++++++|.++++ +++.+++|++++++.+.
T Consensus 288 ~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e------~i~~~~g~~~~~~d~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~ 360 (394)
T 3okp_A 288 DVEGLGIVYLEAQACGVPVIAGTSGGAPE------TVTPATGLVVEGSDVDKLSELLIELLD-DPIRRAAMGAAGRAHVE 360 (394)
T ss_dssp BCCSSCHHHHHHHHTTCCEEECSSTTGGG------GCCTTTEEECCTTCHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHH
T ss_pred cccccCcHHHHHHHcCCCEEEeCCCChHH------HHhcCCceEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 2789999999999999998655443 55556777776 99999999999999 99999999999999887
Q ss_pred C-chHHHHHHHHHHHHhh
Q 036427 509 P-DAVFRIVQDLHELVRQ 525 (536)
Q Consensus 509 ~-~~~~~i~~~i~~l~~~ 525 (536)
+ ++++++++.+.+++++
T Consensus 361 ~~~s~~~~~~~~~~~~~~ 378 (394)
T 3okp_A 361 AEWSWEIMGERLTNILQS 378 (394)
T ss_dssp HHTBHHHHHHHHHHHHHS
T ss_pred HhCCHHHHHHHHHHHHHH
Confidence 6 8999999999999986
No 6
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.97 E-value=6.3e-28 Score=251.28 Aligned_cols=349 Identities=11% Similarity=0.100 Sum_probs=245.2
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccC-CCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHT-PWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~-~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
++.||........||....+..|+++|.++ |++|.++....... ......+. ....+... + ..
T Consensus 14 ~~~~~~~~~~p~~GG~~~~~~~la~~L~~~---G~~V~v~~~~~~~~~~~~~~~i~------~~~~~~~~--~-----~~ 77 (394)
T 2jjm_A 14 MKLKIGITCYPSVGGSGVVGTELGKQLAER---GHEIHFITSGLPFRLNKVYPNIY------FHEVTVNQ--Y-----SV 77 (394)
T ss_dssp -CCEEEEECCC--CHHHHHHHHHHHHHHHT---TCEEEEECSSCC----CCCTTEE------EECCCCC-----------
T ss_pred heeeeehhcCCCCCCHHHHHHHHHHHHHhC---CCEEEEEeCCCCCcccccCCceE------EEeccccc--c-----cc
Confidence 345676665444489999999999999998 88888775422100 00000000 00000000 0 00
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHc-CCCCCceEEEEecCCCC----c------cccc
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAK-GLLKKIVFTTVITDLST----C------HPTW 290 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~-g~~~~ip~v~~~~d~~~----~------~~~~ 290 (536)
... ..........+.+++++.+||+||++.+........++++. + .++|++...|+... . ..++
T Consensus 78 ~~~---~~~~~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~--~~~p~v~~~h~~~~~~~~~~~~~~~~~~~ 152 (394)
T 2jjm_A 78 FQY---PPYDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIG--ERIKIVTTLHGTDITVLGSDPSLNNLIRF 152 (394)
T ss_dssp CCS---CCHHHHHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTT--TCSEEEEECCHHHHHTTTTCTTTHHHHHH
T ss_pred ccc---ccccHHHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhc--CCCCEEEEEecCcccccCCCHHHHHHHHH
Confidence 000 01223344678888999999999998765433333333332 2 13898877775210 0 1134
Q ss_pred ccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHH
Q 036427 291 FHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATAR 370 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~ 370 (536)
..+.+|.++++|+..++.+.+.+..+.++.+++|+++...+.+. +...++++++++++.++++++|+....|+...+++
T Consensus 153 ~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~ 231 (394)
T 2jjm_A 153 GIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKR-DMTQLKKEYGISESEKILIHISNFRKVKRVQDVVQ 231 (394)
T ss_dssp HHHHSSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCCC-CCHHHHHHTTCC---CEEEEECCCCGGGTHHHHHH
T ss_pred HHhhCCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCCc-chHHHHHHcCCCCCCeEEEEeeccccccCHHHHHH
Confidence 46789999999999999998875556789999999998877654 35678889999888889999998877788888777
Q ss_pred HHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC---C-hHHHHHHH
Q 036427 371 ALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---G-PGTIAEAM 443 (536)
Q Consensus 371 al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---G-~~tllEAm 443 (536)
++..... .+++++ +++|.++ ++.+.++++++.++|++.|+.+++.++|+.||++|+|| | |++++|||
T Consensus 232 a~~~l~~-----~~~~~l-~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAm 305 (394)
T 2jjm_A 232 AFAKIVT-----EVDAKL-LLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAM 305 (394)
T ss_dssp HHHHHHH-----SSCCEE-EEECCCTTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSEEEECCSCCSCCHHHHHHH
T ss_pred HHHHHHh-----hCCCEE-EEECCchHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCEEEeccccCCCchHHHHHH
Confidence 7765443 245654 5567664 45666777777789999999999999999999999998 3 89999999
Q ss_pred HhCCcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc-CCchHHHHHHHHH
Q 036427 444 IRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLA-RPDAVFRIVQDLH 520 (536)
Q Consensus 444 a~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~ 520 (536)
++|+|||+++.++..+. +.+.+.|.+++ |+++++++|.++++ +++.+++|++++++.+ +.++++++++.+.
T Consensus 306 a~G~PvI~~~~~~~~e~-----v~~~~~g~~~~~~d~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 379 (394)
T 2jjm_A 306 ACGVPCIGTRVGGIPEV-----IQHGDTGYLCEVGDTTGVADQAIQLLK-DEELHRNMGERARESVYEQFRSEKIVSQYE 379 (394)
T ss_dssp HTTCCEEEECCTTSTTT-----CCBTTTEEEECTTCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred hcCCCEEEecCCChHHH-----hhcCCceEEeCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999997654442 33445677776 99999999999999 9999999999999988 7799999999999
Q ss_pred HHHhh
Q 036427 521 ELVRQ 525 (536)
Q Consensus 521 ~l~~~ 525 (536)
+++++
T Consensus 380 ~~~~~ 384 (394)
T 2jjm_A 380 TIYYD 384 (394)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98876
No 7
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.96 E-value=1.6e-27 Score=250.38 Aligned_cols=362 Identities=15% Similarity=0.064 Sum_probs=242.2
Q ss_pred CCceEEEEeCC----CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCC-Ccch---h--HHHH---HHhhccc
Q 036427 143 QPKKVLILMSD----TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPF-NQLP---R--SYNF---LVKHGPL 209 (536)
Q Consensus 143 ~~mKIL~~~~~----~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~-~~~~---~--~y~~---~~~~~~l 209 (536)
++||||+++.. ..||....+..|+++|.++ ||+|.|+........... ..+. . .... .....+.
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~---G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 77 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASL---GHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRI 77 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHT---TCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHC---CCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceE
Confidence 46999999843 3389999999999999999 788877653221110000 0000 0 0000 0000000
Q ss_pred cceeec-CCCccccc--chhhhhhhHHHHHHHHHHHHhh-----CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec
Q 036427 210 WKMTYY-GTAPRVIH--QSNFAATSTFIAREVAKGLMKY-----QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT 281 (536)
Q Consensus 210 ~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~-----kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~ 281 (536)
+..... ........ ...+......+.+.+.+++++. +||+||++......++..+.+..+ +|++...|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~----~~~v~~~h 153 (439)
T 3fro_A 78 YRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFK----IPAVFTIH 153 (439)
T ss_dssp EEEESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHC----CCEEEEES
T ss_pred EEecchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccC----CCEEEEec
Confidence 000000 00000000 0000111222334455555544 999999997654444444445444 89888888
Q ss_pred CCCCc----------------------ccccccccCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCC---
Q 036427 282 DLSTC----------------------HPTWFHKLVTRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVR--- 335 (536)
Q Consensus 282 d~~~~----------------------~~~~~~~~~d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~--- 335 (536)
+.... ..++..+.+|.++++|+..++.... ++.+..++.+++|+++.+.+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~ 233 (439)
T 3fro_A 154 RLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTG 233 (439)
T ss_dssp CCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCS
T ss_pred ccccccCchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcCcccccc
Confidence 76421 0122346799999999999887443 246788999999999998776541
Q ss_pred ----chHHHHHHcCCCCCCCEEEEecCCC-CCCcHHHHHHHHHHHhhhcccCC--CCcEEEEEecCCH-H----HHHHHH
Q 036427 336 ----PKVELRRELGMDEDLPAVLLMGGGE-GMGPIEATARALGNALYDENLGE--PIGQVLVICGRNK-K----LANKLL 403 (536)
Q Consensus 336 ----~~~~~r~~lgi~~~~~~il~~gg~~-g~k~~~~~l~al~~~l~~~~~~~--~~~~~lvi~G~~~-~----l~~~l~ 403 (536)
.++.++++++++++ ++++++|+.. ..|+...+++++..... .. +++++ +++|.++ + +.+..+
T Consensus 234 ~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~----~~~~~~~~l-~i~G~g~~~~~~~l~~~~~ 307 (439)
T 3fro_A 234 SRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSS----KKEFQEMRF-IIIGKGDPELEGWARSLEE 307 (439)
T ss_dssp CHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHT----SGGGGGEEE-EEECCCCHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHh----cccCCCeEE-EEEcCCChhHHHHHHHHHh
Confidence 34678889999887 8888898887 78888888877765442 12 56665 5567664 2 233344
Q ss_pred cCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC-
Q 036427 404 STDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK- 476 (536)
Q Consensus 404 ~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~- 476 (536)
+.+ ..+.+.|++ +++.++|+.||++|+|| | |++++|||+||+|||+++.++ ..++++.+.|.+++
T Consensus 308 ~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~------~~e~~~~~~g~~~~~ 379 (439)
T 3fro_A 308 KHG--NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGG------LRDIITNETGILVKA 379 (439)
T ss_dssp HCT--TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTH------HHHHCCTTTCEEECT
T ss_pred hcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCC------cceeEEcCceEEeCC
Confidence 444 677889976 57999999999999998 4 899999999999999998543 33466667888776
Q ss_pred -CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 477 -SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 477 -d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|+++++++|.++++++++.+++|++++++.++.++++.+++.+.+++++
T Consensus 380 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 380 GDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTG 429 (439)
T ss_dssp TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Confidence 9999999999999756889999999999998889999999999999886
No 8
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.96 E-value=4.5e-27 Score=244.87 Aligned_cols=343 Identities=15% Similarity=0.121 Sum_probs=231.4
Q ss_pred CCCCCCceEEEEeCC---CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeec
Q 036427 139 IENDQPKKVLILMSD---TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYY 215 (536)
Q Consensus 139 ~~~~~~mKIL~~~~~---~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~ 215 (536)
..+.+||||||++.. ..||....+..++++|.+. |++|.++.........+.... .....+...+.
T Consensus 15 ~~~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~---G~~V~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 83 (406)
T 2gek_A 15 VPRGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA---GHEVSVLAPASPHVKLPDYVV--------SGGKAVPIPYN 83 (406)
T ss_dssp ------CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT---TCEEEEEESCCTTSCCCTTEE--------ECCCCC-----
T ss_pred ccCCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC---CCeEEEEecCCccccCCcccc--------cCCcEEecccc
Confidence 334567999999854 3389999999999999998 788877654332211110000 00000110000
Q ss_pred CCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCccc-------
Q 036427 216 GTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHP------- 288 (536)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~------- 288 (536)
.. ... ..........+.+++++.+||+||++.+........+++..+ +|++...++......
T Consensus 84 ~~----~~~---~~~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~----~~~i~~~h~~~~~~~~~~~~~~ 152 (406)
T 2gek_A 84 GS----VAR---LRFGPATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAE----GPIVATFHTSTTKSLTLSVFQG 152 (406)
T ss_dssp --------------CCHHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEE----SSEEEEECCCCCSHHHHHHHHS
T ss_pred CC----ccc---ccccHHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcC----CCEEEEEcCcchhhhhHHHHHH
Confidence 00 000 001122335778889999999999988665444344455444 788877776532111
Q ss_pred --ccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCC-CCCCcH
Q 036427 289 --TWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGG-EGMGPI 365 (536)
Q Consensus 289 --~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~-~g~k~~ 365 (536)
.+..+.+|.++++|+..++.+.+. ++..++ +++|+++...+.+.... .++.++.+.++++|+. ...|+.
T Consensus 153 ~~~~~~~~~d~ii~~s~~~~~~~~~~-~~~~~~-vi~~~v~~~~~~~~~~~------~~~~~~~~~i~~~G~~~~~~Kg~ 224 (406)
T 2gek_A 153 ILRPYHEKIIGRIAVSDLARRWQMEA-LGSDAV-EIPNGVDVASFADAPLL------DGYPREGRTVLFLGRYDEPRKGM 224 (406)
T ss_dssp TTHHHHTTCSEEEESSHHHHHHHHHH-HSSCEE-ECCCCBCHHHHHTCCCC------TTCSCSSCEEEEESCTTSGGGCH
T ss_pred HHHHHHhhCCEEEECCHHHHHHHHHh-cCCCcE-EecCCCChhhcCCCchh------hhccCCCeEEEEEeeeCccccCH
Confidence 144678999999999999988763 345678 99999987644332211 1233355788889888 777888
Q ss_pred HHHHHHHHHHhhhcccCCCCcEEEEEecCCHH--HHHHHHcCCCCCCEEEecChh--hHHHHHhhcCeEEECC----C-h
Q 036427 366 EATARALGNALYDENLGEPIGQVLVICGRNKK--LANKLLSTDWKIPVQVKGFVS--KMEEAMGACDCIITKA----G-P 436 (536)
Q Consensus 366 ~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~--l~~~l~~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~s----G-~ 436 (536)
..+++++..... ..+++++ +++|.++. +.+.++++ .++|++.|+++ ++.++|+.||++|+|| | |
T Consensus 225 ~~li~a~~~l~~----~~~~~~l-~i~G~~~~~~l~~~~~~~--~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~ 297 (406)
T 2gek_A 225 AVLLAALPKLVA----RFPDVEI-LIVGRGDEDELREQAGDL--AGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFG 297 (406)
T ss_dssp HHHHHHHHHHHT----TSTTCEE-EEESCSCHHHHHHHTGGG--GGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSC
T ss_pred HHHHHHHHHHHH----HCCCeEE-EEEcCCcHHHHHHHHHhc--cCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCc
Confidence 887777765433 2467765 45576653 33333333 57899999995 6799999999999997 2 8
Q ss_pred HHHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeec--CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHH
Q 036427 437 GTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFS--KSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVF 513 (536)
Q Consensus 437 ~tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~--~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~ 513 (536)
++++|||++|+|||+++.++ ...+++ ...|.++ .|+++++++|.++++ +++.+++|++++++++..++++
T Consensus 298 ~~~~Ea~a~G~PvI~~~~~~------~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~s~~ 370 (406)
T 2gek_A 298 IVLVEAMAAGTAVVASDLDA------FRRVLADGDAGRLVPVDDADGMAAALIGILE-DDQLRAGYVARASERVHRYDWS 370 (406)
T ss_dssp HHHHHHHHHTCEEEECCCHH------HHHHHTTTTSSEECCTTCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHGGGGBHH
T ss_pred hHHHHHHHcCCCEEEecCCc------HHHHhcCCCceEEeCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999998633 233454 4567777 499999999999999 9999999999999998889999
Q ss_pred HHHHHHHHHHhh
Q 036427 514 RIVQDLHELVRQ 525 (536)
Q Consensus 514 ~i~~~i~~l~~~ 525 (536)
++++.+.+++++
T Consensus 371 ~~~~~~~~~~~~ 382 (406)
T 2gek_A 371 VVSAQIMRVYET 382 (406)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999888875
No 9
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.96 E-value=3.1e-27 Score=247.84 Aligned_cols=346 Identities=14% Similarity=0.097 Sum_probs=232.8
Q ss_pred CCCCceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCc
Q 036427 141 NDQPKKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAP 219 (536)
Q Consensus 141 ~~~~mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~ 219 (536)
.+++|||++++.. .+||+.+.+..|++.|.+. ||+|.+........ ...............+.+.
T Consensus 37 ~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~---G~~v~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~-------- 102 (416)
T 2x6q_A 37 KLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSI---GIEARWFVIEGPTE---FFNVTKTFHNALQGNESLK-------- 102 (416)
T ss_dssp TTTTCEEEEEESCSSSSTHHHHHHHHHHHHHHT---TCEEEEEECCCCHH---HHHHHHHHHHHHTTCCSCC--------
T ss_pred hhhccEEEEEeCCCCCCCHHHHHHHHHHHHHhC---CCeEEEEEccCCcc---hhhhhcccceeeccccccc--------
Confidence 3567999999865 3589999999999999998 77886654322100 0000000000000000000
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCccc-------cccc
Q 036427 220 RVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHP-------TWFH 292 (536)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~-------~~~~ 292 (536)
.... .........+.+.+++++.+||+||++.+....+. .+ ... .+|++...|+...... .++.
T Consensus 103 --~~~~-~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~-~~---~~~--~~p~v~~~h~~~~~~~~~~~~~~~~~~ 173 (416)
T 2x6q_A 103 --LTEE-MKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALI-EF---YEK--KSPWLWRCHIDLSSPNREFWEFLRRFV 173 (416)
T ss_dssp --CCHH-HHHHHHHHHHHHHHSSCGGGSSEEEEESSTTGGGG-GG---SCC--CSCEEEECCSCCSSCCHHHHHHHHHHH
T ss_pred --ccHH-HHHHHHHHHHHHHHHHhhcCCCEEEEeccchhhHH-HH---HHh--cCCEEEEEccccCCccHHHHHHHHHHH
Confidence 0000 00011122345566677889999999986543321 11 111 2788766664332111 1234
Q ss_pred ccCCEEEE-cCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCC----chHHHHHHcCCCCCCCEEEEecCCCCCCcHHH
Q 036427 293 KLVTRCYC-PTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVR----PKVELRRELGMDEDLPAVLLMGGGEGMGPIEA 367 (536)
Q Consensus 293 ~~~d~vi~-~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~----~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~ 367 (536)
..+|.+++ .|+...+ +++..++.+++|+++...+.+.. ....++++++++++.++++++|+....|+...
T Consensus 174 ~~~~~~i~~~s~~~~~-----~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~ 248 (416)
T 2x6q_A 174 EKYDRYIFHLPEYVQP-----ELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFD 248 (416)
T ss_dssp TTSSEEEESSGGGSCT-----TSCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHH
T ss_pred HhCCEEEEechHHHHh-----hCCccceEEeCCCCChhhhcccccChhhHHHHHHHhCCCCCCcEEEEEeccccccCHHH
Confidence 56677664 5544332 45567899999999976554321 23567889999988899999999888888888
Q ss_pred HHHHHHHHhhhcccCCCCcEEEEEecCCH--------HHHHHHHcCCCCCCEEEecChh-----hHHHHHhhcCeEEECC
Q 036427 368 TARALGNALYDENLGEPIGQVLVICGRNK--------KLANKLLSTDWKIPVQVKGFVS-----KMEEAMGACDCIITKA 434 (536)
Q Consensus 368 ~l~al~~~l~~~~~~~~~~~~lvi~G~~~--------~l~~~l~~~~~~~~V~~~G~v~-----~l~~ll~~aDv~V~~s 434 (536)
+++++..... ..+++++ +++|.++ .+.+..++.+..++|+|+|+++ ++.++|+.||++|+||
T Consensus 249 li~a~~~l~~----~~~~~~l-~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps 323 (416)
T 2x6q_A 249 VIEIYRKVKE----KIPGVQL-LLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMS 323 (416)
T ss_dssp HHHHHHHHHH----HCTTCEE-EEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECC
T ss_pred HHHHHHHHHH----hCCCeEE-EEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECC
Confidence 8877765543 2467765 4556652 2344455567778999999774 8999999999999998
Q ss_pred ---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC-C
Q 036427 435 ---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLAR-P 509 (536)
Q Consensus 435 ---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~-~ 509 (536)
| |++++|||++|+|||+++.++..+ .+.+.+.|.+++|+++++++|..+++ |++.+++|++++++.+. .
T Consensus 324 ~~E~~~~~~lEAma~G~PvI~~~~~g~~e-----~i~~~~~g~l~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~ 397 (416)
T 2x6q_A 324 IREGFGLTVTEAMWKGKPVIGRAVGGIKF-----QIVDGETGFLVRDANEAVEVVLYLLK-HPEVSKEMGAKAKERVRKN 397 (416)
T ss_dssp SSCSSCHHHHHHHHTTCCEEEESCHHHHH-----HCCBTTTEEEESSHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCccHHHHHHHcCCCEEEccCCCChh-----heecCCCeEEECCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHH
Confidence 3 899999999999999998643222 23344578888899999999999999 99999999999999876 6
Q ss_pred chHHHHHHHHHHHHhh
Q 036427 510 DAVFRIVQDLHELVRQ 525 (536)
Q Consensus 510 ~~~~~i~~~i~~l~~~ 525 (536)
++++++++.+.+++++
T Consensus 398 fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 398 FIITKHMERYLDILNS 413 (416)
T ss_dssp TBHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHH
Confidence 8999999999998875
No 10
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.95 E-value=1.1e-25 Score=235.51 Aligned_cols=336 Identities=13% Similarity=0.140 Sum_probs=229.4
Q ss_pred ceEEEEeC--CCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchh-HHHHHHhhccccceeecCCCccc
Q 036427 145 KKVLILMS--DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPR-SYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 145 mKIL~~~~--~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~-~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
|||+|++. ..+||..+.+..|+++|.+. |+|.+++...... ........ ......... .+. +.
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~----~~V~v~~~~~~g~-~~~~~~~~~~~~~~~~~~-~~~-------~~- 66 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA----HEVIVFGIHAFGR-SVHANIEEFDAQTAEHVR-GLN-------EQ- 66 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT----SEEEEEEESCCSC-CSCSSSEEEEHHHHHHHT-TCC-------ST-
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc----CCeEEEeecCCCc-ccccccccCCcccccccc-ccc-------cc-
Confidence 89999974 45589999999999999986 4555554322210 11111110 000000000 000 00
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC---cccccccccCC--
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST---CHPTWFHKLVT-- 296 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~---~~~~~~~~~~d-- 296 (536)
.+....+.+.+++.+||+||++.... .....+.+..+.....+.+...+.... ...+++.+.+|
T Consensus 67 ----------~~~~~~l~~~l~~~~~Div~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (413)
T 3oy2_A 67 ----------GFYYSGLSEFIDVHKPDIVMIYNDPI-VIGNYLLAMGKCSHRTKIVLYVDLVSKNIRENLWWIFSHPKVV 135 (413)
T ss_dssp ----------TCCHHHHHHHHHHHCCSEEEEEECHH-HHHHHHHHGGGCCSCCEEEEEECCCSBSCCGGGGGGGGCTTEE
T ss_pred ----------cchHHHHHHHHHhcCCCEEEEcchHH-HHHHHHHHhccCCCCCceeeeccccchhhHHHHHHHHhccCCc
Confidence 01112556778899999999984322 222222333332111233333333221 11256778877
Q ss_pred EEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCC--CCCEEEEecCCCCCCcHHHHHHHHHH
Q 036427 297 RCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDE--DLPAVLLMGGGEGMGPIEATARALGN 374 (536)
Q Consensus 297 ~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~--~~~~il~~gg~~g~k~~~~~l~al~~ 374 (536)
.++++|+..++.+.+++. +.++.+++|+++...+ ...++++++++ +.++++++|+....|+...+++++..
T Consensus 136 ~ii~~S~~~~~~~~~~~~-~~~~~vi~ngvd~~~~------~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~ 208 (413)
T 3oy2_A 136 GVMAMSKCWISDICNYGC-KVPINIVSHFVDTKTI------YDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAAR 208 (413)
T ss_dssp EEEESSTHHHHHHHHTTC-CSCEEECCCCCCCCCC------TTHHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHH
T ss_pred eEEEcCHHHHHHHHHcCC-CCceEEeCCCCCHHHH------HHHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHH
Confidence 999999999999999887 6889999999998766 24567788877 77888888887777888888888776
Q ss_pred HhhhcccCCCCcEEEEEecCC---------HHHHHHHHcCCCCCC-------EEEecChh--hHHHHHhhcCeEEECC--
Q 036427 375 ALYDENLGEPIGQVLVICGRN---------KKLANKLLSTDWKIP-------VQVKGFVS--KMEEAMGACDCIITKA-- 434 (536)
Q Consensus 375 ~l~~~~~~~~~~~~lvi~G~~---------~~l~~~l~~~~~~~~-------V~~~G~v~--~l~~ll~~aDv~V~~s-- 434 (536)
... ..++++++++ |.+ ..+.+.+++.++.++ +.+.|+++ ++.++|+.||++|+||
T Consensus 209 l~~----~~~~~~l~iv-G~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~ 283 (413)
T 3oy2_A 209 FIS----KYPDAKVRFL-CNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSG 283 (413)
T ss_dssp HHH----HCTTCCEEEE-EECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCSC
T ss_pred HHH----hCCCcEEEEE-eCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCCc
Confidence 443 2567776554 443 334455556677776 88889974 9999999999999998
Q ss_pred -C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCc----------------ee--ecC--CHHHHHHHHHHHhCCC
Q 036427 435 -G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGC----------------GK--FSK--SPKEIANMVSQWFGPK 492 (536)
Q Consensus 435 -G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~----------------g~--~~~--d~~~La~~I~~ll~~d 492 (536)
| |++++|||++|+|||+++.++.. ++++.+. |. ++. |+++++++| ++++ +
T Consensus 284 E~~~~~~lEAma~G~PvI~s~~~g~~------e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~-~ 355 (413)
T 3oy2_A 284 EGFGLCSAEGAVLGKPLIISAVGGAD------DYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFK-D 355 (413)
T ss_dssp CSSCHHHHHHHTTTCCEEEECCHHHH------HHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTT-S
T ss_pred CCCCcHHHHHHHcCCCEEEcCCCChH------HHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhc-C
Confidence 3 89999999999999999965433 3444433 44 553 999999999 9999 9
Q ss_pred HHHHHHHHHHHHHhc-CCchHHHHHHHHHHHHhh
Q 036427 493 IDELKAMSQNALKLA-RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 493 ~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~l~~~ 525 (536)
++.+++|++++++.+ +.++++++++.+.+++++
T Consensus 356 ~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 356 EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999999999999987 468999999999888775
No 11
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.95 E-value=6.4e-27 Score=241.51 Aligned_cols=351 Identities=15% Similarity=0.123 Sum_probs=222.8
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcc
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPR 220 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~ 220 (536)
|+++|||++++... ++...+..++++|.+. ++++++.++..... . ........ .......+...... +.
T Consensus 5 m~~~mkIl~v~~~~--~~~~~~~~l~~~L~~~-~~~~~v~~~~~~~~---~--~~~~~~~~-~~~~~~~~~~~~~~--~~ 73 (375)
T 3beo_A 5 MTERLKVMTIFGTR--PEAIKMAPLVLELQKH-PEKIESIVTVTAQH---R--QMLDQVLS-IFGITPDFDLNIMK--DR 73 (375)
T ss_dssp CSSCEEEEEEECSH--HHHHHHHHHHHHHTTC-TTTEEEEEEECCSS---S--HHHHHHHH-HHTCCCSEECCCCC--TT
T ss_pred CCcCceEEEEecCc--HHHHHHHHHHHHHHhC-CCCCCeEEEEcCCC---H--HHHHHHHH-HcCCCCccccccCC--Cc
Confidence 45569999998654 5556677889999886 43477755432111 0 00000000 00110000100000 00
Q ss_pred cccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCCC--c---ccc-----
Q 036427 221 VIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLST--C---HPT----- 289 (536)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~~--~---~~~----- 289 (536)
............++.+++++++||+||++++....++ ..+++..+ +|++.+.+.... . ...
T Consensus 74 ----~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~----ip~v~~~~~~~~~~~~~~~~~~~~~~ 145 (375)
T 3beo_A 74 ----QTLIDITTRGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQ----IPVGHVEAGLRTWDKYSPYPEEMNRQ 145 (375)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTT----CCEEEESCCCCCSCTTSSTTHHHHHH
T ss_pred ----ccHHHHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHC----CCEEEEecccccccccCCChhHhhhh
Confidence 0001112233457888999999999999876433322 23344444 888866554311 0 111
Q ss_pred cccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCC-CCCCCCCCCC-chHHHHHHcCCCCCCCEEEEecCCCC-C-CcH
Q 036427 290 WFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLP-VRPSFVKPVR-PKVELRRELGMDEDLPAVLLMGGGEG-M-GPI 365 (536)
Q Consensus 290 ~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignp-v~~~~~~~~~-~~~~~r~~lgi~~~~~~il~~gg~~g-~-k~~ 365 (536)
++.+.+|.++++|+..++.+.+.|++++++.++||+ ++...+.+.. .+.++++++ + +.+++++++|... . |+.
T Consensus 146 ~~~~~~d~ii~~s~~~~~~~~~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~--~-~~~~vl~~~gr~~~~~K~~ 222 (375)
T 3beo_A 146 LTGVMADLHFSPTAKSATNLQKENKDESRIFITGNTAIDALKTTVKETYSHPVLEKL--G-NNRLVLMTAHRRENLGEPM 222 (375)
T ss_dssp HHHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTT--T-TSEEEEEECCCGGGTTHHH
T ss_pred HHhhhhheeeCCCHHHHHHHHHcCCCcccEEEECChhHhhhhhhhhhhhhHHHHHhc--c-CCCeEEEEecccccchhHH
Confidence 133459999999999999998889888899999999 5543322211 223455554 2 3445555555433 2 555
Q ss_pred HHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcC-CCCCCEEEecCh--hhHHHHHhhcCeEEECCChHHHHHH
Q 036427 366 EATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGFV--SKMEEAMGACDCIITKAGPGTIAEA 442 (536)
Q Consensus 366 ~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~-~~~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEA 442 (536)
..+++++..... ..+++++++..|...++.+.+++. ...++|+|+|++ .++.++|+.||++|++|| ++++||
T Consensus 223 ~~li~a~~~l~~----~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~sg-~~~lEA 297 (375)
T 3beo_A 223 RNMFRAIKRLVD----KHEDVQVVYPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDSG-GVQEEA 297 (375)
T ss_dssp HHHHHHHHHHHH----HCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECCH-HHHHHH
T ss_pred HHHHHHHHHHHh----hCCCeEEEEeCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECCC-ChHHHH
Confidence 556666554332 245676544334334444555443 333689997776 389999999999999995 569999
Q ss_pred HHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 036427 443 MIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHE 521 (536)
Q Consensus 443 ma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~ 521 (536)
|++|+|||+++..++ ..++++.|.|.++ .|+++|+++|.++++ |++.+++|+++++++...++++++++.+.+
T Consensus 298 ~a~G~Pvi~~~~~~~-----~~e~v~~g~g~~v~~d~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 371 (375)
T 3beo_A 298 PSLGVPVLVLRDTTE-----RPEGIEAGTLKLAGTDEETIFSLADELLS-DKEAHDKMSKASNPYGDGRASERIVEAILK 371 (375)
T ss_dssp HHHTCCEEECSSCCS-----CHHHHHTTSEEECCSCHHHHHHHHHHHHH-CHHHHHHHCCCCCTTCCSCHHHHHHHHHHH
T ss_pred HhcCCCEEEecCCCC-----CceeecCCceEEcCCCHHHHHHHHHHHHh-ChHhHhhhhhcCCCCCCCcHHHHHHHHHHH
Confidence 999999999964222 2346778888887 499999999999999 999999999999988888999999999998
Q ss_pred HHh
Q 036427 522 LVR 524 (536)
Q Consensus 522 l~~ 524 (536)
+++
T Consensus 372 ~~~ 374 (375)
T 3beo_A 372 HFN 374 (375)
T ss_dssp HTT
T ss_pred Hhh
Confidence 765
No 12
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.95 E-value=1.2e-27 Score=247.95 Aligned_cols=353 Identities=17% Similarity=0.125 Sum_probs=227.0
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||+++++.. .+...+..|+++|+++.+++++|+++..... ...... ...+..+.......... .
T Consensus 1 mkIl~v~~~~--~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~-------~~~~~~---~~~~~~~~~~~~~~~~~---~ 65 (384)
T 1vgv_A 1 MKVLTVFGTR--PEAIKMAPLVHALAKDPFFEAKVCVTAQHRE-------MLDQVL---KLFSIVPDYDLNIMQPG---Q 65 (384)
T ss_dssp CEEEEEECSH--HHHHHHHHHHHHHHHSTTCEEEEEECCSSGG-------GGHHHH---HHHTCCCSEECCCCSTT---S
T ss_pred CeEEEEeccc--HHHHHHHHHHHHHHhCCCCceEEEEcCCCHH-------HHHHHH---HHcCCCCCcceecCCCC---c
Confidence 7999987654 4456678999999998112444444321110 000111 01110000000000000 0
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHH-HHHHHcCCCCCceEEEEecCCCCc----------ccccccc
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPL-RILRAKGLLKKIVFTTVITDLSTC----------HPTWFHK 293 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~-~~~~~~g~~~~ip~v~~~~d~~~~----------~~~~~~~ 293 (536)
... .........+.+++++++||+||++++.....+. .+++.. ++|++.+.++.... ...++.+
T Consensus 66 ~~~-~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~----~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (384)
T 1vgv_A 66 GLT-EITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQ----RIPVGHVEAGLRTGDLYSPWPEEANRTLTGH 140 (384)
T ss_dssp CHH-HHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTT----TCCEEEESCCCCCSCTTSSTTHHHHHHHHHT
T ss_pred cHH-HHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHH----CCCEEEEecccccccccCCCchHhhHHHHHh
Confidence 010 1122334678889999999999998763322232 233333 38988777654211 0122356
Q ss_pred cCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCC-------chHHHHHHcC-CCCCCCEEEEecCCCC-C-C
Q 036427 294 LVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVR-------PKVELRRELG-MDEDLPAVLLMGGGEG-M-G 363 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~-------~~~~~r~~lg-i~~~~~~il~~gg~~g-~-k 363 (536)
.+|.++++|+..++.+.+.|++++++.++|||+.+....... .+.+++++++ ++++.+++++++|... . +
T Consensus 141 ~~d~ii~~s~~~~~~l~~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~k 220 (384)
T 1vgv_A 141 LAMYHFSPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGR 220 (384)
T ss_dssp TCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCH
T ss_pred hccEEEcCcHHHHHHHHHcCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCccccch
Confidence 799999999999999988899888999999995432211100 0124566777 7555565555555433 3 4
Q ss_pred cHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcC-CCCCCEEEecCh--hhHHHHHhhcCeEEECCChHHHH
Q 036427 364 PIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGFV--SKMEEAMGACDCIITKAGPGTIA 440 (536)
Q Consensus 364 ~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~-~~~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tll 440 (536)
+...+++++..... ..++++++++.|.++++.+.+++. +..++|+|+|++ +++.++|+.||++|++||+ +++
T Consensus 221 g~~~li~a~~~l~~----~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~Sg~-~~l 295 (384)
T 1vgv_A 221 GFEEICHALADIAT----THQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDSGG-IQE 295 (384)
T ss_dssp HHHHHHHHHHHHHH----HCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESSST-GGG
T ss_pred HHHHHHHHHHHHHh----hCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcEEEECCcc-hHH
Confidence 55556666654432 135677766667665444444432 224689996654 5899999999999999964 488
Q ss_pred HHHHhCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 036427 441 EAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDL 519 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i 519 (536)
|||++|+|||+++..+ +..++++.|.|.+++ |+++|+++|.++++ |++.+++|+++++++...++++++++.+
T Consensus 296 EA~a~G~PvI~~~~~~-----~~~e~v~~g~g~lv~~d~~~la~~i~~ll~-d~~~~~~~~~~~~~~~~~~~~~~i~~~~ 369 (384)
T 1vgv_A 296 EAPSLGKPVLVMRDTT-----ERPEAVTAGTVRLVGTDKQRIVEEVTRLLK-DENEYQAMSRAHNPYGDGQACSRILEAL 369 (384)
T ss_dssp TGGGGTCCEEEESSCC-----SCHHHHHHTSEEEECSSHHHHHHHHHHHHH-CHHHHHHHHSSCCTTCCSCHHHHHHHHH
T ss_pred HHHHcCCCEEEccCCC-----CcchhhhCCceEEeCCCHHHHHHHHHHHHh-ChHHHhhhhhccCCCcCCCHHHHHHHHH
Confidence 9999999999998633 233467778888885 99999999999999 9999999999999998889999999999
Q ss_pred HHHHhhcCC
Q 036427 520 HELVRQRNF 528 (536)
Q Consensus 520 ~~l~~~~~~ 528 (536)
.+++++..+
T Consensus 370 ~~~~~~~~~ 378 (384)
T 1vgv_A 370 KNNRISLGS 378 (384)
T ss_dssp HHTCCCC--
T ss_pred HHHHHhhcc
Confidence 998877544
No 13
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.95 E-value=4.3e-28 Score=249.78 Aligned_cols=337 Identities=14% Similarity=0.149 Sum_probs=233.3
Q ss_pred ceEEEEeCC--CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 145 KKVLILMSD--TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 145 mKIL~~~~~--~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
|||++++.. ..||..+.+..|+++|.++ ||+|.++...... ..+ .++ +...... ...
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~---G~~V~v~~~~~~~-~~~-~~~-----------~v~~~~~----~~~- 59 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAAR---GHHVRVYTQSWEG-DCP-KAF-----------ELIQVPV----KSH- 59 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHT---TCCEEEEESEECS-CCC-TTC-----------EEEECCC----CCS-
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhC---CCeEEEEecCCCC-CCC-CCc-----------EEEEEcc----Ccc-
Confidence 799999753 2379999999999999998 7778766543211 000 000 0000000 000
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccc----------hHHHHHHHHcCCCCCceEEEEecCCCCc------
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQ----------HVPLRILRAKGLLKKIVFTTVITDLSTC------ 286 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~----------~i~~~~~~~~g~~~~ip~v~~~~d~~~~------ 286 (536)
............+.+++++.+||+||++..... .++.. ....+. . ......
T Consensus 60 ---~~~~~~~~~~~~l~~~i~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~-----~~~~~~~~~~~~ 126 (374)
T 2iw1_A 60 ---TNHGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKV-AQEKGF----L-----YRLTSRYRHYAA 126 (374)
T ss_dssp ---SHHHHHHHHHHHHHHHHHHSCCSEEEESSCCTTCSEEECCSCCHHHHH-HHHCCH----H-----HHTSHHHHHHHH
T ss_pred ---cchhhHHHHHHHHHHHHhccCCCEEEEecCCCCceeeeccccccceee-eecccc----h-----hhhcHHHHHHHH
Confidence 000112234457788899999999999763211 11111 010110 0 000000
Q ss_pred cccccc--ccCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCCC---chHHHHHHcCCCCCCCEEEEecCCC
Q 036427 287 HPTWFH--KLVTRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPVR---PKVELRRELGMDEDLPAVLLMGGGE 360 (536)
Q Consensus 287 ~~~~~~--~~~d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~~---~~~~~r~~lgi~~~~~~il~~gg~~ 360 (536)
..++.. +.+|.++++|+..++.+.+ +|++..++.+++|+++.+.+.+.. .++.++++++++++.++++++|+..
T Consensus 127 ~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~ 206 (374)
T 2iw1_A 127 FERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDF 206 (374)
T ss_dssp HHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCT
T ss_pred HHHHHhhccCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhCCCCCCeEEEEeccch
Confidence 001111 3689999999999999887 588888999999999987665432 2457889999988888899999888
Q ss_pred CCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECC----
Q 036427 361 GMGPIEATARALGNALYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKA---- 434 (536)
Q Consensus 361 g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~s---- 434 (536)
..|+...+++++...... ..+++++ +++|.++ ++.+.+++.++.++|+++|+.+++.++|+.||++|+||
T Consensus 207 ~~K~~~~li~a~~~l~~~---~~~~~~l-~i~G~g~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~ps~~e~ 282 (374)
T 2iw1_A 207 GRKGVDRSIEALASLPES---LRHNTLL-FVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEA 282 (374)
T ss_dssp TTTTHHHHHHHHHTSCHH---HHHTEEE-EEESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCSCCS
T ss_pred hhcCHHHHHHHHHHhHhc---cCCceEE-EEEcCCCHHHHHHHHHHcCCCCcEEECCCcccHHHHHHhcCEEEeccccCC
Confidence 778888777766543220 0135655 4556553 55666677777789999999999999999999999998
Q ss_pred ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC---CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCch
Q 036427 435 GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK---SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDA 511 (536)
Q Consensus 435 G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~---d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~ 511 (536)
+|++++|||++|+|||+++.++..+ .+.+.+.|.+++ |+++++++|.++++ +++.+++|++++++.+.++.
T Consensus 283 ~~~~~~Ea~a~G~Pvi~~~~~~~~e-----~i~~~~~g~~~~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~ 356 (374)
T 2iw1_A 283 AGIVLLEAITAGLPVLTTAVCGYAH-----YIADANCGTVIAEPFSQEQLNEVLRKALT-QSPLRMAWAENARHYADTQD 356 (374)
T ss_dssp SCHHHHHHHHHTCCEEEETTSTTTH-----HHHHHTCEEEECSSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHSC
T ss_pred cccHHHHHHHCCCCEEEecCCCchh-----hhccCCceEEeCCCCCHHHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHhh
Confidence 3899999999999999999754333 366667888775 89999999999999 99999999999999888877
Q ss_pred HHHHHHHHHHHHhh
Q 036427 512 VFRIVQDLHELVRQ 525 (536)
Q Consensus 512 ~~~i~~~i~~l~~~ 525 (536)
++.+++.+.+++++
T Consensus 357 ~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 357 LYSLPEKAADIITG 370 (374)
T ss_dssp CSCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH
Confidence 77788888877765
No 14
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.95 E-value=5.9e-26 Score=243.00 Aligned_cols=265 Identities=14% Similarity=0.079 Sum_probs=194.0
Q ss_pred HhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc--c----------c------------------cccc
Q 036427 243 MKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC--H----------P------------------TWFH 292 (536)
Q Consensus 243 ~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~--~----------~------------------~~~~ 292 (536)
++.+||+||++......++..+.+. .. .++|++...|+.... . + ++..
T Consensus 127 ~~~~~DiIh~~~~~~~~~~~~~~~~-~~-~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 1rzu_A 127 PGWRPDMVHAHDWQAAMTPVYMRYA-ET-PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGL 204 (485)
T ss_dssp SSCCCSEEEEEHHHHTTHHHHHHHS-SS-CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHH
T ss_pred cCCCCCEEEecccchhHHHHHHhhc-cc-CCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHH
Confidence 4679999999874433333333332 11 238988877775310 0 0 1224
Q ss_pred ccCCEEEEcCHHHHHHHHH--hC--------CCCCCEEEeCCCCCCCCCCCCCc------------------hHHHHHHc
Q 036427 293 KLVTRCYCPTADVAKRAMK--AG--------LQASQIKVYGLPVRPSFVKPVRP------------------KVELRREL 344 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~--~g--------~~~~ki~vignpv~~~~~~~~~~------------------~~~~r~~l 344 (536)
+.+|.++++|+..++.+.+ +| .++.++.+++|+++.+.+.+..+ +..+++++
T Consensus 205 ~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 284 (485)
T 1rzu_A 205 QTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHF 284 (485)
T ss_dssp HHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHH
T ss_pred hhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhc
Confidence 6789999999999998765 24 36689999999999887765432 46788899
Q ss_pred CCCCC-CCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-----HHHHHHHcCCCCCCEE-EecCh
Q 036427 345 GMDED-LPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-----KLANKLLSTDWKIPVQ-VKGFV 417 (536)
Q Consensus 345 gi~~~-~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-----~l~~~l~~~~~~~~V~-~~G~v 417 (536)
+++++ .++++++|+....|+...+++++..... +++++ +++|.++ .+.+..+++ ..+|+ +.|+.
T Consensus 285 ~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~------~~~~l-~ivG~g~~~~~~~l~~~~~~~--~~~v~~~~g~~ 355 (485)
T 1rzu_A 285 RIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS------LGGRL-VVLGAGDVALEGALLAAASRH--HGRVGVAIGYN 355 (485)
T ss_dssp TCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH------TTCEE-EEEECBCHHHHHHHHHHHHHT--TTTEEEEESCC
T ss_pred CCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh------cCceE-EEEeCCchHHHHHHHHHHHhC--CCcEEEecCCC
Confidence 99875 6788888888778888887777765432 35665 4456653 223333333 36887 79997
Q ss_pred hh-HHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC----------CceeecC--CHHH
Q 036427 418 SK-MEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN----------GCGKFSK--SPKE 480 (536)
Q Consensus 418 ~~-l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~----------g~g~~~~--d~~~ 480 (536)
++ +.++|+.||++|+|| | |++++|||+||+|||+++.++. .+++++ +.|.+++ |+++
T Consensus 356 ~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~------~e~v~~~~~~~~~~~~~~G~l~~~~d~~~ 429 (485)
T 1rzu_A 356 EPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGL------ADTVIDANHAALASKAATGVQFSPVTLDG 429 (485)
T ss_dssp HHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHH------HHHCCBCCHHHHHTTCCCBEEESSCSHHH
T ss_pred HHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCCCCh------hheecccccccccccCCcceEeCCCCHHH
Confidence 54 489999999999998 4 8999999999999999986433 335555 4677775 8999
Q ss_pred HHHHHHHHh---CCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhcC
Q 036427 481 IANMVSQWF---GPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQRN 527 (536)
Q Consensus 481 La~~I~~ll---~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~~~ 527 (536)
|+++|.+++ + |++.+++|++++++ +.++++++++.+.+++++-.
T Consensus 430 la~~i~~ll~~~~-~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~ 476 (485)
T 1rzu_A 430 LKQAIRRTVRYYH-DPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLI 476 (485)
T ss_dssp HHHHHHHHHHHHT-CHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhC-CHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHHhh
Confidence 999999999 8 99999999999975 78999999999999887643
No 15
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.95 E-value=1.2e-25 Score=240.68 Aligned_cols=270 Identities=12% Similarity=0.062 Sum_probs=197.4
Q ss_pred HHHHHHHHh----hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc--cc---------------------
Q 036427 236 REVAKGLMK----YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC--HP--------------------- 288 (536)
Q Consensus 236 ~~l~~~l~~----~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~--~~--------------------- 288 (536)
..+.++++. .+||+||++......++..+..+. .++|++...|+.... .+
T Consensus 115 ~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~---~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (485)
T 2qzs_A 115 WVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARG---RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEF 191 (485)
T ss_dssp HHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHTT---CSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEE
T ss_pred HHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhhcc---CCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccc
Confidence 455566663 799999999854433333333111 248998877765310 00
Q ss_pred -------ccccccCCEEEEcCHHHHHHHHH--hCCC--------C--CCEEEeCCCCCCCCCCCCCc-------------
Q 036427 289 -------TWFHKLVTRCYCPTADVAKRAMK--AGLQ--------A--SQIKVYGLPVRPSFVKPVRP------------- 336 (536)
Q Consensus 289 -------~~~~~~~d~vi~~S~~~~~~l~~--~g~~--------~--~ki~vignpv~~~~~~~~~~------------- 336 (536)
++..+.+|.++++|+..++.+.+ +|.. + .++.+++|+++.+.+.+...
T Consensus 192 ~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~ 271 (485)
T 2qzs_A 192 NGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLE 271 (485)
T ss_dssp TTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGG
T ss_pred cccccHHHHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchh
Confidence 11246789999999999988764 3432 2 78999999999887765432
Q ss_pred -----hHHHHHHcCCCC--CCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-----HHHHHHHc
Q 036427 337 -----KVELRRELGMDE--DLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-----KLANKLLS 404 (536)
Q Consensus 337 -----~~~~r~~lgi~~--~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-----~l~~~l~~ 404 (536)
+..+++++++++ +.++++++|+....|+...+++++..... ++++++ ++|.++ .+.+..++
T Consensus 272 ~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~------~~~~l~-ivG~g~~~~~~~l~~~~~~ 344 (485)
T 2qzs_A 272 DKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE------QGGQLA-LLGAGDPVLQEGFLAAAAE 344 (485)
T ss_dssp GGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH------TTCEEE-EEEEECHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh------CCcEEE-EEeCCchHHHHHHHHHHHh
Confidence 467888999986 67889999988778888888877765432 356654 445553 23333344
Q ss_pred CCCCCCEE-EecChhh-HHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC---------
Q 036427 405 TDWKIPVQ-VKGFVSK-MEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN--------- 469 (536)
Q Consensus 405 ~~~~~~V~-~~G~v~~-l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~--------- 469 (536)
+ ..+|. +.|+.++ +.++|+.||++|+|| | |++++|||+||+|||+++.++ ..++++.
T Consensus 345 ~--~~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg------~~e~v~~~~~~~~~~~ 416 (485)
T 2qzs_A 345 Y--PGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGG------LADTVSDCSLENLADG 416 (485)
T ss_dssp S--TTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHH------HHHHCCBCCHHHHHTT
T ss_pred C--CCcEEEeCCCCHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEECCCCC------ccceeccCcccccccc
Confidence 3 36886 8999754 589999999999998 4 899999999999999998643 3335555
Q ss_pred -CceeecC--CHHHHHHHHHHHh---CCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhc
Q 036427 470 -GCGKFSK--SPKEIANMVSQWF---GPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 470 -g~g~~~~--d~~~La~~I~~ll---~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~~ 526 (536)
+.|.+++ |+++|+++|.+++ + |++.+++|++++++ +.++++++++.+.+++++.
T Consensus 417 ~~~G~l~~~~d~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~ 476 (485)
T 2qzs_A 417 VASGFVFEDSNAWSLLRAIRRAFVLWS-RPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRL 476 (485)
T ss_dssp CCCBEEECSSSHHHHHHHHHHHHHHHT-SHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHH
T ss_pred ccceEEECCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHh
Confidence 4677775 8999999999999 8 89999999999975 7899999999999988763
No 16
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.94 E-value=2.7e-26 Score=237.39 Aligned_cols=272 Identities=15% Similarity=0.116 Sum_probs=188.8
Q ss_pred HHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCCC----------cccccccccCCEEEEcCH
Q 036427 235 AREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLST----------CHPTWFHKLVTRCYCPTA 303 (536)
Q Consensus 235 ~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~~----------~~~~~~~~~~d~vi~~S~ 303 (536)
...+.+++++++||+||++++....++ ..+++..+ +|+++++++... ....++.+.+|.++++|+
T Consensus 80 ~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~----ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 155 (376)
T 1v4v_A 80 LPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEG----IPVGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAPTP 155 (376)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTT----CCEEEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSH
T ss_pred HHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhC----CCEEEEeCCCccccccCCCchHHHHHHHHHHhceeeCCCH
Confidence 457788899999999999876443333 33445554 888766654321 112345677899999999
Q ss_pred HHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCC-CCCcHHHHHHHHHHHhhhcccC
Q 036427 304 DVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGE-GMGPIEATARALGNALYDENLG 382 (536)
Q Consensus 304 ~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~-g~k~~~~~l~al~~~l~~~~~~ 382 (536)
..++.+.+.|++++++.++||+..+.+.... .++++++++ + +.+++++++|.. ..++...+++++..... .
T Consensus 156 ~~~~~l~~~g~~~~ki~vi~n~~~d~~~~~~-~~~~~~~~~--~-~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~----~ 227 (376)
T 1v4v_A 156 LAKANLLKEGKREEGILVTGQTGVDAVLLAA-KLGRLPEGL--P-EGPYVTVTMHRRENWPLLSDLAQALKRVAE----A 227 (376)
T ss_dssp HHHHHHHTTTCCGGGEEECCCHHHHHHHHHH-HHCCCCTTC--C-SSCEEEECCCCGGGGGGHHHHHHHHHHHHH----H
T ss_pred HHHHHHHHcCCCcceEEEECCchHHHHhhhh-hhhHHHHhc--C-CCCEEEEEeCcccchHHHHHHHHHHHHHHh----h
Confidence 9999998889988899999998643211000 000111122 2 345555555543 33455566666554332 2
Q ss_pred CCCcEEEEEecCCHHHHHHHHcC-CCCCCEEEecCh--hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccc
Q 036427 383 EPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGFV--SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQE 459 (536)
Q Consensus 383 ~~~~~~lvi~G~~~~l~~~l~~~-~~~~~V~~~G~v--~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e 459 (536)
.+++++++++|.++.+.+.++++ ...++|+|+|++ .++.++|+.||++|++||+. ++|||++|+|+|+++..++.+
T Consensus 228 ~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~~v~~S~g~-~lEA~a~G~PvI~~~~~~~~~ 306 (376)
T 1v4v_A 228 FPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDSGGL-QEEGAALGVPVVVLRNVTERP 306 (376)
T ss_dssp CTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESCHHH-HHHHHHTTCCEEECSSSCSCH
T ss_pred CCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcEEEECCcCH-HHHHHHcCCCEEeccCCCcch
Confidence 45677666668765444444432 224589999543 28999999999999999644 789999999999987544333
Q ss_pred cCChhhHhhCCceeec-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 460 AGNVPYVVENGCGKFS-KSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 460 ~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
.+++.|.|.++ .|+++|+++|.++++ |++.+++|++++.++....+++++++.+.++++.
T Consensus 307 -----~~~~~g~g~lv~~d~~~la~~i~~ll~-d~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~ 367 (376)
T 1v4v_A 307 -----EGLKAGILKLAGTDPEGVYRVVKGLLE-NPEELSRMRKAKNPYGDGKAGLMVARGVAWRLGL 367 (376)
T ss_dssp -----HHHHHTSEEECCSCHHHHHHHHHHHHT-CHHHHHHHHHSCCSSCCSCHHHHHHHHHHHHTTS
T ss_pred -----hhhcCCceEECCCCHHHHHHHHHHHHh-ChHhhhhhcccCCCCCCChHHHHHHHHHHHHhcc
Confidence 26777888888 599999999999999 9999999998777777778999999999988763
No 17
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.94 E-value=6.7e-26 Score=237.06 Aligned_cols=351 Identities=17% Similarity=0.148 Sum_probs=229.0
Q ss_pred CCCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCC
Q 036427 139 IENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTA 218 (536)
Q Consensus 139 ~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~ 218 (536)
..+++||||+++++.. .+.. -...|.++|++. + ++++.++..... ..............|-+.+......
T Consensus 20 ~~~~~m~ki~~v~Gtr-~~~~-~~a~li~~l~~~-~-~~~~~~~~tG~h------~~~~~~~~~~~~i~~~~~l~~~~~~ 89 (396)
T 3dzc_A 20 FQSNAMKKVLIVFGTR-PEAI-KMAPLVQQLCQD-N-RFVAKVCVTGQH------REMLDQVLELFSITPDFDLNIMEPG 89 (396)
T ss_dssp ----CCEEEEEEECSH-HHHH-HHHHHHHHHHHC-T-TEEEEEEECCSS------SHHHHHHHHHTTCCCSEECCCCCTT
T ss_pred HHhCCCCeEEEEEecc-HhHH-HHHHHHHHHHhC-C-CCcEEEEEeccc------HHHHHHHHHhcCCCCceeeecCCCC
Confidence 3345678999998775 3433 346688999886 3 577754432111 0000000000111111111000000
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCC--Ccc---c----
Q 036427 219 PRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLS--TCH---P---- 288 (536)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~--~~~---~---- 288 (536)
... .........++.+++++++||+||+++.....++ ...++..+ ||++.+..... ..+ +
T Consensus 90 -----~~~-~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~----IPv~h~~ag~rs~~~~~~~~~~~~ 159 (396)
T 3dzc_A 90 -----QTL-NGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQ----IPVGHVEAGLRTGNIYSPWPEEGN 159 (396)
T ss_dssp -----CCH-HHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTT----CCEEEETCCCCCSCTTSSTTHHHH
T ss_pred -----CCH-HHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhC----CCEEEEECCccccccccCCcHHHH
Confidence 111 1122345568889999999999999987655444 33444444 99876654221 111 1
Q ss_pred cc-ccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCc-------hHHHHHHcC-CCCCCCEEEEecCC
Q 036427 289 TW-FHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRP-------KVELRRELG-MDEDLPAVLLMGGG 359 (536)
Q Consensus 289 ~~-~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~-------~~~~r~~lg-i~~~~~~il~~gg~ 359 (536)
++ +.+.+|.++++++..++.+.+.|++++++.++|||+.+........ +++++++++ ++++.++++++++.
T Consensus 160 r~~~~~~a~~~~~~se~~~~~l~~~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR 239 (396)
T 3dzc_A 160 RKLTAALTQYHFAPTDTSRANLLQENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHR 239 (396)
T ss_dssp HHHHHHTCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSC
T ss_pred HHHHHHhcCEEECCCHHHHHHHHHcCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECC
Confidence 12 3678899999999999999999999999999999875543221111 256778888 56667777777754
Q ss_pred CCC--CcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcC-CCCCCEEEecCh--hhHHHHHhhcCeEEECC
Q 036427 360 EGM--GPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGFV--SKMEEAMGACDCIITKA 434 (536)
Q Consensus 360 ~g~--k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~-~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s 434 (536)
.+. +.+..+++++.+... ..+++++++.+|.+++..+.+++. +..++|.+++++ .++..+|+.||++|++|
T Consensus 240 ~~~~~~~~~~ll~A~~~l~~----~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S 315 (396)
T 3dzc_A 240 RESFGGGFERICQALITTAE----QHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDS 315 (396)
T ss_dssp BCCCTTHHHHHHHHHHHHHH----HCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSEEEESC
T ss_pred cccchhHHHHHHHHHHHHHH----hCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCEEEECC
Confidence 332 334444554443322 246777777678776566666553 445689998877 48889999999999999
Q ss_pred ChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHH
Q 036427 435 GPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVF 513 (536)
Q Consensus 435 G~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~ 513 (536)
|+. .+|||++|+|+|+++..++. .++++.|.+.++. |+++|++++..+++ |++.+++|++++..+...++++
T Consensus 316 Gg~-~~EA~a~G~PvV~~~~~~~~-----~e~v~~G~~~lv~~d~~~l~~ai~~ll~-d~~~~~~m~~~~~~~~~~~aa~ 388 (396)
T 3dzc_A 316 GGI-QEEAPSLGKPVLVMRETTER-----PEAVAAGTVKLVGTNQQQICDALSLLLT-DPQAYQAMSQAHNPYGDGKACQ 388 (396)
T ss_dssp SGG-GTTGGGGTCCEEECCSSCSC-----HHHHHHTSEEECTTCHHHHHHHHHHHHH-CHHHHHHHHTSCCTTCCSCHHH
T ss_pred ccH-HHHHHHcCCCEEEccCCCcc-----hHHHHcCceEEcCCCHHHHHHHHHHHHc-CHHHHHHHhhccCCCcCChHHH
Confidence 844 48999999999998543322 2367788888876 79999999999999 9999999999998899999999
Q ss_pred HHHHHHH
Q 036427 514 RIVQDLH 520 (536)
Q Consensus 514 ~i~~~i~ 520 (536)
+|++.|.
T Consensus 389 ri~~~l~ 395 (396)
T 3dzc_A 389 RIADILA 395 (396)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998775
No 18
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.93 E-value=5.4e-25 Score=230.60 Aligned_cols=351 Identities=12% Similarity=0.089 Sum_probs=230.1
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
|++|||+++++.. .+... ...|.++|++. +.++++.++..... + .-..... ......+-+.+......
T Consensus 25 m~~~kI~~v~Gtr-~~~~~-~a~li~~l~~~-~~~~~~~~~~tG~h---~--~m~~~~~-~~~~i~~~~~l~v~~~~--- 92 (403)
T 3ot5_A 25 MAKIKVMSIFGTR-PEAIK-MAPLVLALEKE-PETFESTVVITAQH---R--EMLDQVL-EIFDIKPDIDLDIMKKG--- 92 (403)
T ss_dssp -CCEEEEEEECSH-HHHHH-HHHHHHHHHTC-TTTEEEEEEECC----------CHHHH-HHTTCCCSEECCCCC-C---
T ss_pred cccceEEEEEecC-hhHHH-HHHHHHHHHhC-CCCCcEEEEEecCc---H--HHHHHHH-HhcCCCCCcccccCCCC---
Confidence 4557999998775 34333 36688999886 32477654432111 0 0011111 01111110110000000
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHH-HHHHHHcCCCCCceEEEEecCCC--Cc--------cccc
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVP-LRILRAKGLLKKIVFTTVITDLS--TC--------HPTW 290 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~-~~~~~~~g~~~~ip~v~~~~d~~--~~--------~~~~ 290 (536)
... .........++.+++++++||+||+++.....++ ...++..+ ||++.+..... +. .+.+
T Consensus 93 --~~~-~~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~----IPv~h~~aglrs~~~~~~~p~~~~r~~ 165 (403)
T 3ot5_A 93 --QTL-AEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQ----KMLGHVEAGLRTWNKYSPFPEEMNRQL 165 (403)
T ss_dssp --CCH-HHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTT----CEEEEESCCCCCSCTTSSTTHHHHHHH
T ss_pred --CCH-HHHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhC----CCEEEEECCccccccccCCcHHHHHHH
Confidence 111 1123345568889999999999999887544443 34455555 99876654221 11 2235
Q ss_pred ccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCC-CC-CchHHHHHHcCCCCCCCEEEEecCCCC--CCcHH
Q 036427 291 FHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVK-PV-RPKVELRRELGMDEDLPAVLLMGGGEG--MGPIE 366 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~-~~-~~~~~~r~~lgi~~~~~~il~~gg~~g--~k~~~ 366 (536)
+.+.+|.++++++..++.+.+.|++++++.++|||..+.... .. ..+.+.++++ ++.++++++++... .+...
T Consensus 166 ~~~~a~~~~~~se~~~~~l~~~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l---~~~~~vlv~~~r~~~~~~~l~ 242 (403)
T 3ot5_A 166 TGVMADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHPILENL---GDNRLILMTAHRRENLGEPMQ 242 (403)
T ss_dssp HHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHSCTTCCCHHHHSC---TTCEEEEECCCCHHHHTTHHH
T ss_pred HHHhcCEEECCCHHHHHHHHHcCCCcccEEEeCCchHHHHHhhhhhhcchHHHHhc---cCCCEEEEEeCcccccCcHHH
Confidence 667789999999999999999999999999999986443211 11 1123445554 44567777666421 12344
Q ss_pred HHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHc-CCCCCCEEEecChh--hHHHHHhhcCeEEECCChHHHHHHH
Q 036427 367 ATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLS-TDWKIPVQVKGFVS--KMEEAMGACDCIITKAGPGTIAEAM 443 (536)
Q Consensus 367 ~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~-~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~sG~~tllEAm 443 (536)
.+++++.+... ..+++++++.+|.++..++.+++ .+..++|.++++++ ++..+|+.||++|++||+.+ +||+
T Consensus 243 ~ll~a~~~l~~----~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~SGg~~-~EA~ 317 (403)
T 3ot5_A 243 GMFEAVREIVE----SREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDSGGVQ-EEAP 317 (403)
T ss_dssp HHHHHHHHHHH----HCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECCHHHH-HHGG
T ss_pred HHHHHHHHHHH----hCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECCccHH-HHHH
Confidence 45555544332 24677777777877655555554 23446899999985 89999999999999997655 8999
Q ss_pred HhCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 036427 444 IRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHEL 522 (536)
Q Consensus 444 a~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l 522 (536)
++|+|+|+++..++++ ++++.|.+.++. |+++|++++..+++ +++.+++|++++..+...+++++|++.|.+.
T Consensus 318 a~g~PvV~~~~~~~~~-----e~v~~g~~~lv~~d~~~l~~ai~~ll~-~~~~~~~m~~~~~~~g~~~aa~rI~~~l~~~ 391 (403)
T 3ot5_A 318 GMGVPVLVLRDTTERP-----EGIEAGTLKLIGTNKENLIKEALDLLD-NKESHDKMAQAANPYGDGFAANRILAAIKSH 391 (403)
T ss_dssp GTTCCEEECCSSCSCH-----HHHHHTSEEECCSCHHHHHHHHHHHHH-CHHHHHHHHHSCCTTCCSCHHHHHHHHHHHH
T ss_pred HhCCCEEEecCCCcch-----hheeCCcEEEcCCCHHHHHHHHHHHHc-CHHHHHHHHhhcCcccCCcHHHHHHHHHHHH
Confidence 9999999996544333 267888888886 99999999999999 9999999999888898999999999999998
Q ss_pred Hhh
Q 036427 523 VRQ 525 (536)
Q Consensus 523 ~~~ 525 (536)
+..
T Consensus 392 l~~ 394 (403)
T 3ot5_A 392 FEE 394 (403)
T ss_dssp HTC
T ss_pred hCC
Confidence 864
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.93 E-value=5.6e-25 Score=230.17 Aligned_cols=350 Identities=14% Similarity=0.082 Sum_probs=223.1
Q ss_pred CCCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccc-----cCCCCCCcchh--------HHHHHHh
Q 036427 139 IENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSD-----HTPWPFNQLPR--------SYNFLVK 205 (536)
Q Consensus 139 ~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~-----~~~~~~~~~~~--------~y~~~~~ 205 (536)
.....+|||+|++.+. +||..++++|+++|.++ ||+|.++..... ..++.+..++. .+.....
T Consensus 15 ~~~~~~MrIl~~~~~~-~Gh~~~~~~la~~L~~~---GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 15 HIEGRHMRVLFASLGT-HGHTYPLLPLATAARAA---GHEVTFATGEGFAGTLRKLGFEPVATGMPVFDGFLAALRIRFD 90 (412)
T ss_dssp ---CCSCEEEEECCSS-HHHHGGGHHHHHHHHHT---TCEEEEEECGGGHHHHHHTTCEEEECCCCHHHHHHHHHHHHHS
T ss_pred CcccceeEEEEEcCCC-cccHHHHHHHHHHHHHC---CCEEEEEccHHHHHHHHhcCCceeecCcccccchhhhhhhhhc
Confidence 3445678999999776 89999999999999999 788877653211 01111111111 0000000
Q ss_pred hccccceeecCCC-cccccch--hhhhh-hHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec
Q 036427 206 HGPLWKMTYYGTA-PRVIHQS--NFAAT-STFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT 281 (536)
Q Consensus 206 ~~~l~~~~~~~~~-~~~~~~~--~~~~~-~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~ 281 (536)
... ..... ....... .+... ......++.+++++++||+||+++.... ...+++..| +|++.+.+
T Consensus 91 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~--~~~aa~~~g----iP~v~~~~ 159 (412)
T 3otg_A 91 TDS-----PEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYG--AGLAALKAG----IPTICHGV 159 (412)
T ss_dssp CSC-----CTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHH--HHHHHHHHT----CCEEEECC
T ss_pred ccC-----CccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhH--HHHHHHHcC----CCEEEecc
Confidence 000 00000 0000000 00111 2223468888999999999999865443 234456666 89887766
Q ss_pred CCCCcc---c---ccc----------------cccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHH
Q 036427 282 DLSTCH---P---TWF----------------HKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVE 339 (536)
Q Consensus 282 d~~~~~---~---~~~----------------~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~ 339 (536)
+..... . .|+ ...+|.+++.++...+...... ... ++++...........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~-- 231 (412)
T 3otg_A 160 GRDTPDDLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRA-RPR-----RHELRPVPFAEQGDL-- 231 (412)
T ss_dssp SCCCCSHHHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHT-CTT-----EEECCCCCCCCCCCC--
T ss_pred cccCchhhhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccC-CCC-----cceeeccCCCCCCCC--
Confidence 543110 0 011 1356677777766555443321 111 111211111111001
Q ss_pred HHHHc--CCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh
Q 036427 340 LRREL--GMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 340 ~r~~l--gi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v 417 (536)
..+ ...++.+++++++|+.+ +...+.+..+.+.+. ..+.++++++|.+. ..+.++ .+.++|.+.|++
T Consensus 232 --~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~-----~~~~~~~~~~g~~~-~~~~l~--~~~~~v~~~~~~ 300 (412)
T 3otg_A 232 --PAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLA-----GLDADVLVASGPSL-DVSGLG--EVPANVRLESWV 300 (412)
T ss_dssp --CGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHH-----TSSSEEEEECCSSC-CCTTCC--CCCTTEEEESCC
T ss_pred --CCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHH-----cCCCEEEEEECCCC-Chhhhc--cCCCcEEEeCCC
Confidence 112 22456778888888776 445566667777665 23567777777654 112222 245789999999
Q ss_pred hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCH
Q 036427 418 SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKI 493 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~ 493 (536)
++.++|+.||++|+++|++|++|||++|+|+|+++..+++. .++..+.+.|.|..+. |+++|+++|.++++ |+
T Consensus 301 -~~~~~l~~ad~~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~-~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~-~~ 377 (412)
T 3otg_A 301 -PQAALLPHVDLVVHHGGSGTTLGALGAGVPQLSFPWAGDSF-ANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLA-EE 377 (412)
T ss_dssp -CHHHHGGGCSEEEESCCHHHHHHHHHHTCCEEECCCSTTHH-HHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHH-CH
T ss_pred -CHHHHHhcCcEEEECCchHHHHHHHHhCCCEEecCCchhHH-HHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHh-CH
Confidence 79999999999999999999999999999999999875544 4888899999999885 78999999999999 99
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 494 DELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 494 ~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
+.+++|++.++++...++++++++.|++++.+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 378 SYRAGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999998864
No 20
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.92 E-value=2.3e-24 Score=241.82 Aligned_cols=274 Identities=14% Similarity=0.113 Sum_probs=196.5
Q ss_pred HHHHHHHHh--hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc-----------------------ccc
Q 036427 236 REVAKGLMK--YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH-----------------------PTW 290 (536)
Q Consensus 236 ~~l~~~l~~--~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~-----------------------~~~ 290 (536)
..+..++++ .+||+||++......+++.+++..| +|++...|++.... ..+
T Consensus 395 ~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~g----vP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~ 470 (816)
T 3s28_A 395 DAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLG----VTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIF 470 (816)
T ss_dssp HHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHT----CCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcC----CCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHH
Confidence 344455554 3799999986443334455566666 89987777543110 012
Q ss_pred ccccCCEEEEcCHHHHHHHHH----h------------------CCCCCCEEEeCCCCCCCCCCCCCchH----------
Q 036427 291 FHKLVTRCYCPTADVAKRAMK----A------------------GLQASQIKVYGLPVRPSFVKPVRPKV---------- 338 (536)
Q Consensus 291 ~~~~~d~vi~~S~~~~~~l~~----~------------------g~~~~ki~vignpv~~~~~~~~~~~~---------- 338 (536)
..+.+|.+++.|+..++.+.+ + +....++.+++|++|.+.+.+.....
T Consensus 471 ~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i 550 (816)
T 3s28_A 471 AMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEI 550 (816)
T ss_dssp HHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHH
T ss_pred HHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccc
Confidence 567899999999998874211 1 11223899999999988776543211
Q ss_pred --------HHHHHcCC--CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH------------
Q 036427 339 --------ELRRELGM--DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK------------ 396 (536)
Q Consensus 339 --------~~r~~lgi--~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~------------ 396 (536)
..++.+|+ +++.++|+++|+....|++..+++++..... ..++++++++ |.++
T Consensus 551 ~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~----~~~~v~LvIv-G~g~~~~~~~~e~~~~ 625 (816)
T 3s28_A 551 EELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTR----LRELANLVVV-GGDRRKESKDNEEKAE 625 (816)
T ss_dssp HHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHH----HHHHCEEEEE-CCCTTSCCCCHHHHHH
T ss_pred cccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHh----hCCCeEEEEE-eCCCcccccchhhHHH
Confidence 12344566 6778899999998888888888887765432 1245666554 5443
Q ss_pred --HHHHHHHcCCCCCCEEEecCh------hhHHHHHh-hcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCCh
Q 036427 397 --KLANKLLSTDWKIPVQVKGFV------SKMEEAMG-ACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNV 463 (536)
Q Consensus 397 --~l~~~l~~~~~~~~V~~~G~v------~~l~~ll~-~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na 463 (536)
++.+.++++++.++|.|+|++ +++..+|+ ++|++|+|| | |++++|||+||+|||+++.++..+
T Consensus 626 ~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~E---- 701 (816)
T 3s28_A 626 MKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAE---- 701 (816)
T ss_dssp HHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHH----
T ss_pred HHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCChHH----
Confidence 345556677888899999964 36778887 679999998 4 899999999999999998654333
Q ss_pred hhHhh-CCceeecC--CHHHHHHHHHHHh----CCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHHhh
Q 036427 464 PYVVE-NGCGKFSK--SPKEIANMVSQWF----GPKIDELKAMSQNALKLA-RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 464 ~~lv~-~g~g~~~~--d~~~La~~I~~ll----~~d~~~~~~m~~~a~~~a-~~~~~~~i~~~i~~l~~~ 525 (536)
++. ...|.+++ |+++++++|.+++ . |++.+++|+++|++.+ +.++|+.+++.+.++++.
T Consensus 702 --iV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~-d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~ 768 (816)
T 3s28_A 702 --IIVHGKSGFHIDPYHGDQAADTLADFFTKCKE-DPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGV 768 (816)
T ss_dssp --HCCBTTTBEEECTTSHHHHHHHHHHHHHHHHH-CTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred --HHccCCcEEEeCCCCHHHHHHHHHHHHHHhcc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 554 44677775 8999999997766 8 9999999999999988 779999999999887764
No 21
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.92 E-value=9.6e-24 Score=222.44 Aligned_cols=345 Identities=12% Similarity=0.071 Sum_probs=212.7
Q ss_pred CCCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccccc-----CCCCCCcchhHHHHHHhhcccccee
Q 036427 139 IENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDH-----TPWPFNQLPRSYNFLVKHGPLWKMT 213 (536)
Q Consensus 139 ~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~-----~~~~~~~~~~~y~~~~~~~~l~~~~ 213 (536)
.++|.||||+|++.+. +||..+++.|+++|.++ ||+|.+++..... .++.+..++. .....
T Consensus 2 ~~~m~m~kIl~~~~~~-~Gh~~p~~~la~~L~~~---G~~V~~~~~~~~~~~~~~~g~~~~~~~~----------~~~~~ 67 (430)
T 2iyf_A 2 TTQTTPAHIAMFSIAA-HGHVNPSLEVIRELVAR---GHRVTYAIPPVFADKVAATGPRPVLYHS----------TLPGP 67 (430)
T ss_dssp ------CEEEEECCSC-HHHHGGGHHHHHHHHHT---TCEEEEEECGGGHHHHHTTSCEEEECCC----------CSCCT
T ss_pred CCccccceEEEEeCCC-CccccchHHHHHHHHHC---CCeEEEEeCHHHHHHHHhCCCEEEEcCC----------cCccc
Confidence 3445678999987655 89999999999999998 7888776532210 0110000000 00000
Q ss_pred ecCCC--cccccchhh--hhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc--c
Q 036427 214 YYGTA--PRVIHQSNF--AATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC--H 287 (536)
Q Consensus 214 ~~~~~--~~~~~~~~~--~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~--~ 287 (536)
..... ......... ..........+.+++++++||+||++.... ....+++..| +|.+.+.+..... .
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~--~~~~~A~~~g----iP~v~~~~~~~~~~~~ 141 (430)
T 2iyf_A 68 DADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSY--PARVLARRWG----VPAVSLSPNLVAWKGY 141 (430)
T ss_dssp TSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCH--HHHHHHHHHT----CCEEEEESSCCCCTTH
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccH--HHHHHHHHcC----CCEEEEeccccccccc
Confidence 00000 000000000 001123345777888899999999876532 2344566666 8988776543200 0
Q ss_pred ---------------c----------ccccc------------cCCEEEEcCHHHHHHHHHhCCCCCC-EEEeCCCCCCC
Q 036427 288 ---------------P----------TWFHK------------LVTRCYCPTADVAKRAMKAGLQASQ-IKVYGLPVRPS 329 (536)
Q Consensus 288 ---------------~----------~~~~~------------~~d~vi~~S~~~~~~l~~~g~~~~k-i~vignpv~~~ 329 (536)
+ .++.+ ..+.+++.+....+... ..++ .+ +.++|+++...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~-~~~v~~vG~~~~~~ 219 (430)
T 2iyf_A 142 EEEVAEPMWREPRQTERGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA-DRVD-EDVYTFVGACQGDR 219 (430)
T ss_dssp HHHTHHHHHHHHHHSHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG-GGSC-TTTEEECCCCC---
T ss_pred ccccccchhhhhccchHHHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc-ccCC-CccEEEeCCcCCCC
Confidence 0 00111 24556665544332211 1122 24 77777654321
Q ss_pred CCCCCCchHHHHHHcCC-CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCC
Q 036427 330 FVKPVRPKVELRRELGM-DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWK 408 (536)
Q Consensus 330 ~~~~~~~~~~~r~~lgi-~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~ 408 (536)
.... .+.. .++.++++++.|+.+ ....+.+..+++.+.+ .++.++++++|.+... +.++ .+.
T Consensus 220 ~~~~---------~~~~~~~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~----~~~~~~~~~~G~~~~~-~~l~--~~~ 282 (430)
T 2iyf_A 220 AEEG---------GWQRPAGAEKVVLVSLGSAF-TKQPAFYRECVRAFGN----LPGWHLVLQIGRKVTP-AELG--ELP 282 (430)
T ss_dssp --CC---------CCCCCTTCSEEEEEECTTTC-C-CHHHHHHHHHHHTT----CTTEEEEEECC---CG-GGGC--SCC
T ss_pred CCCC---------CCccccCCCCeEEEEcCCCC-CCcHHHHHHHHHHHhc----CCCeEEEEEeCCCCCh-HHhc--cCC
Confidence 1000 0111 234566777777766 4445667777776641 1467777788876521 2222 245
Q ss_pred CCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHH
Q 036427 409 IPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANM 484 (536)
Q Consensus 409 ~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~ 484 (536)
++|.+.||+++. ++|+.||++|+++|++|++|||++|+|+|+++..+++ ..|++.+++.|.|..+. ++++|+++
T Consensus 283 ~~v~~~~~~~~~-~~l~~ad~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q-~~~a~~~~~~g~g~~~~~~~~~~~~l~~~ 360 (430)
T 2iyf_A 283 DNVEVHDWVPQL-AILRQADLFVTHAGAGGSQEGLATATPMIAVPQAVDQ-FGNADMLQGLGVARKLATEEATADLLRET 360 (430)
T ss_dssp TTEEEESSCCHH-HHHTTCSEEEECCCHHHHHHHHHTTCCEEECCCSHHH-HHHHHHHHHTTSEEECCCC-CCHHHHHHH
T ss_pred CCeEEEecCCHH-HHhhccCEEEECCCccHHHHHHHhCCCEEECCCccch-HHHHHHHHHcCCEEEcCCCCCCHHHHHHH
Confidence 789999999887 8999999999999999999999999999999976544 45888899999998885 78999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 485 VSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 485 I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|.++++ |++.+++|++.++++...++++++++.|++++++
T Consensus 361 i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 400 (430)
T 2iyf_A 361 ALALVD-DPEVARRLRRIQAEMAQEGGTRRAADLIEAELPA 400 (430)
T ss_dssp HHHHHH-CHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC
T ss_pred HHHHHc-CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhc
Confidence 999999 9999999999999888788999999999887765
No 22
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.92 E-value=4.8e-24 Score=217.53 Aligned_cols=295 Identities=14% Similarity=0.092 Sum_probs=203.6
Q ss_pred CCCceEEEEeCC---------------CCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhh
Q 036427 142 DQPKKVLILMSD---------------TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKH 206 (536)
Q Consensus 142 ~~~mKIL~~~~~---------------~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~ 206 (536)
|++|||++++.. ..||..+.+..|+++|.+. |++|.++........ ....
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~---G~~v~v~~~~~~~~~--~~~~---------- 65 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLEL---GHEVFLLGAPGSPAG--RPGL---------- 65 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHT---TCEEEEESCTTSCCC--STTE----------
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHc---CCeEEEEecCCCCCC--CCcc----------
Confidence 456999999876 3489999999999999998 888888765332111 0000
Q ss_pred ccccceeecCCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc
Q 036427 207 GPLWKMTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC 286 (536)
Q Consensus 207 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~ 286 (536)
..+. . . . ...+.+++++.+||+||++....... .++. .++| +...|+...
T Consensus 66 -~~~~----~-------~------~---~~~l~~~l~~~~~Dvi~~~~~~~~~~---~~~~----~~~p-v~~~h~~~~- 115 (342)
T 2iuy_A 66 -TVVP----A-------G------E---PEEIERWLRTADVDVVHDHSGGVIGP---AGLP----PGTA-FISSHHFTT- 115 (342)
T ss_dssp -EECS----C-------C------S---HHHHHHHHHHCCCSEEEECSSSSSCS---TTCC----TTCE-EEEEECSSS-
T ss_pred -eecc----C-------C------c---HHHHHHHHHhcCCCEEEECCchhhHH---HHhh----cCCC-EEEecCCCC-
Confidence 0000 0 0 0 01667788999999999988654321 1221 2478 777776542
Q ss_pred ccccccccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHH
Q 036427 287 HPTWFHKLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIE 366 (536)
Q Consensus 287 ~~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~ 366 (536)
. ...+|.++++|+..++.+.+ ..++.+++|+++.+.+.+... .. ++.++++++|+....|+..
T Consensus 116 ~----~~~~d~ii~~S~~~~~~~~~----~~~~~vi~ngvd~~~~~~~~~--------~~-~~~~~i~~vG~~~~~Kg~~ 178 (342)
T 2iuy_A 116 R----PVNPVGCTYSSRAQRAHCGG----GDDAPVIPIPVDPARYRSAAD--------QV-AKEDFLLFMGRVSPHKGAL 178 (342)
T ss_dssp B----CSCCTTEEESCHHHHHHTTC----CTTSCBCCCCBCGGGSCCSTT--------CC-CCCSCEEEESCCCGGGTHH
T ss_pred C----cccceEEEEcCHHHHHHHhc----CCceEEEcCCCChhhcCcccc--------cC-CCCCEEEEEeccccccCHH
Confidence 1 22389999999999988754 577899999999876654321 11 3456788888877778877
Q ss_pred HHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecChh--hHHHHHhhcCeEEECCC------
Q 036427 367 ATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFVS--KMEEAMGACDCIITKAG------ 435 (536)
Q Consensus 367 ~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~sG------ 435 (536)
.+++++... ++++ +++|.++ .+.+..++++ ++|+|.|+++ ++.++|+.||++|+||-
T Consensus 179 ~li~a~~~~---------~~~l-~i~G~g~~~~~l~~~~~~~~--~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~ 246 (342)
T 2iuy_A 179 EAAAFAHAC---------GRRL-VLAGPAWEPEYFDEITRRYG--STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPW 246 (342)
T ss_dssp HHHHHHHHH---------TCCE-EEESCCCCHHHHHHHHHHHT--TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTT
T ss_pred HHHHHHHhc---------CcEE-EEEeCcccHHHHHHHHHHhC--CCEEEeccCCHHHHHHHHHhCCEEEECCccccccc
Confidence 777766542 3554 4557654 3334444433 6999999996 66999999999998753
Q ss_pred --------hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC---CceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 436 --------PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN---GCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 436 --------~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~---g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
|++++|||++|+|||+++.++.. ++++. ..|.+++ |+++++++|.++++ ++++
T Consensus 247 ~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~------e~~~~~~~~~g~~~~~d~~~l~~~i~~l~~---------~~~~ 311 (342)
T 2iuy_A 247 GGIWCEPGATVVSEAAVSGTPVVGTGNGCLA------EIVPSVGEVVGYGTDFAPDEARRTLAGLPA---------SDEV 311 (342)
T ss_dssp CSCCCCCCCHHHHHHHHTTCCEEECCTTTHH------HHGGGGEEECCSSSCCCHHHHHHHHHTSCC---------HHHH
T ss_pred ccccccCccHHHHHHHhcCCCEEEcCCCChH------HHhcccCCCceEEcCCCHHHHHHHHHHHHH---------HHHH
Confidence 79999999999999999964433 35544 4677777 99999999999875 4455
Q ss_pred HHhc-CCchHHHHHHHHHHHHhh
Q 036427 504 LKLA-RPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 504 ~~~a-~~~~~~~i~~~i~~l~~~ 525 (536)
++.+ +.++++++++.+.+++++
T Consensus 312 ~~~~~~~~s~~~~~~~~~~~~~~ 334 (342)
T 2iuy_A 312 RRAAVRLWGHVTIAERYVEQYRR 334 (342)
T ss_dssp HHHHHHHHBHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHH
Confidence 5554 457788888877777654
No 23
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.92 E-value=1.2e-22 Score=212.82 Aligned_cols=354 Identities=13% Similarity=0.057 Sum_probs=213.4
Q ss_pred CCCCCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccc-----cCCCCCCcchhHHHHHHhhccccc
Q 036427 137 NGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSD-----HTPWPFNQLPRSYNFLVKHGPLWK 211 (536)
Q Consensus 137 ~~~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~-----~~~~~~~~~~~~y~~~~~~~~l~~ 211 (536)
+..+...||||+|++.+. .||..++++|+++|.++ ||+|.+++.... ..++.+..++.... .. ....
T Consensus 13 ~~~~~~~m~rIl~~~~~~-~GHv~p~l~La~~L~~~---Gh~V~v~~~~~~~~~~~~~G~~~~~~~~~~~---~~-~~~~ 84 (415)
T 3rsc_A 13 GHIEGRHMAHLLIVNVAS-HGLILPTLTVVTELVRR---GHRVSYVTAGGFAEPVRAAGATVVPYQSEII---DA-DAAE 84 (415)
T ss_dssp ------CCCEEEEECCSC-HHHHGGGHHHHHHHHHT---TCEEEEEECGGGHHHHHHTTCEEEECCCSTT---TC-CHHH
T ss_pred CCcCcccCCEEEEEeCCC-ccccccHHHHHHHHHHC---CCEEEEEeCHHHHHHHHhcCCEEEecccccc---cc-ccch
Confidence 455667789999999875 89999999999999999 888877653211 01111111100000 00 0000
Q ss_pred eeecCCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccc
Q 036427 212 MTYYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWF 291 (536)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~ 291 (536)
... ...........+..........+.+++++++||+||++++.... ...++++.| +|++.+.+++.. +..|.
T Consensus 85 ~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~-~~~aA~~~g----iP~v~~~~~~~~-~~~~~ 157 (415)
T 3rsc_A 85 VFG-SDDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIA-GQLLAARWR----RPAVRLSAAFAS-NEHYS 157 (415)
T ss_dssp HHH-SSSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHH-HHHHHHHTT----CCEEEEESSCCC-CSSCC
T ss_pred hhc-cccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhH-HHHHHHHhC----CCEEEEEecccc-cCccc
Confidence 000 00000000000111222344677888999999999987333222 234456665 899887765531 11110
Q ss_pred c---------ccCCEEE-EcCHHHHHHHHHhCCC-----------------------------CCCEEEeCCCCCCCCCC
Q 036427 292 H---------KLVTRCY-CPTADVAKRAMKAGLQ-----------------------------ASQIKVYGLPVRPSFVK 332 (536)
Q Consensus 292 ~---------~~~d~vi-~~S~~~~~~l~~~g~~-----------------------------~~ki~vignpv~~~~~~ 332 (536)
. ......+ .......+.+.++|++ +.++.++|+++.+..
T Consensus 158 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~~-- 235 (415)
T 3rsc_A 158 FSQDMVTLAGTIDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTFDDRFVFVGPCFDDRR-- 235 (415)
T ss_dssp HHHHHHHHHTCCCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGCCTTEEECCCCCCCCG--
T ss_pred cccccccccccCChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccCCCceEEeCCCCCCcc--
Confidence 0 0000000 0001111222223332 123444443332110
Q ss_pred CCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEE
Q 036427 333 PVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQ 412 (536)
Q Consensus 333 ~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~ 412 (536)
+........++.++|++++|+..... .+.+..+.+++. ..++++++++|.+... +.++ ....++.
T Consensus 236 ------~~~~~~~~~~~~~~v~v~~Gs~~~~~-~~~~~~~~~al~-----~~~~~~v~~~g~~~~~-~~l~--~~~~~v~ 300 (415)
T 3rsc_A 236 ------FLGEWTRPADDLPVVLVSLGTTFNDR-PGFFRDCARAFD-----GQPWHVVMTLGGQVDP-AALG--DLPPNVE 300 (415)
T ss_dssp ------GGCCCCCCSSCCCEEEEECTTTSCCC-HHHHHHHHHHHT-----TSSCEEEEECTTTSCG-GGGC--CCCTTEE
T ss_pred ------cCcCccccCCCCCEEEEECCCCCCCh-HHHHHHHHHHHh-----cCCcEEEEEeCCCCCh-HHhc--CCCCcEE
Confidence 00000111345678888878765433 355666666664 2337777778876321 2222 2457899
Q ss_pred EecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHH
Q 036427 413 VKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQW 488 (536)
Q Consensus 413 ~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~l 488 (536)
+.+|+++. ++|..||++|+++|.+|++|||++|+|+|++|...++. .|+..+.+.|.|..+. ++++|+++|.++
T Consensus 301 ~~~~~~~~-~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~-~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~l 378 (415)
T 3rsc_A 301 AHRWVPHV-KVLEQATVCVTHGGMGTLMEALYWGRPLVVVPQSFDVQ-PMARRVDQLGLGAVLPGEKADGDTLLAAVGAV 378 (415)
T ss_dssp EESCCCHH-HHHHHEEEEEESCCHHHHHHHHHTTCCEEECCCSGGGH-HHHHHHHHHTCEEECCGGGCCHHHHHHHHHHH
T ss_pred EEecCCHH-HHHhhCCEEEECCcHHHHHHHHHhCCCEEEeCCcchHH-HHHHHHHHcCCEEEcccCCCCHHHHHHHHHHH
Confidence 99999876 99999999999999999999999999999998755544 5899999999998875 789999999999
Q ss_pred hCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 489 FGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 489 l~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
++ |++.+++|++.+.++...++++++++.|++++.+
T Consensus 379 l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 379 AA-DPALLARVEAMRGHVRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp HT-CHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred Hc-CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence 99 9999999999999999999999999999988754
No 24
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.91 E-value=1.7e-22 Score=210.28 Aligned_cols=345 Identities=11% Similarity=0.082 Sum_probs=216.0
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccc-----cCCCCCCcchhHHHHHHhhccccceeecC
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSD-----HTPWPFNQLPRSYNFLVKHGPLWKMTYYG 216 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~-----~~~~~~~~~~~~y~~~~~~~~l~~~~~~~ 216 (536)
|.||||+|++.+. .||..+++.|+++|.++ ||+|.++..... ..+..+..++..+. . .......
T Consensus 2 m~M~~il~~~~~~-~Ghv~~~~~La~~L~~~---GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~----~---~~~~~~~ 70 (402)
T 3ia7_A 2 MRQRHILFANVQG-HGHVYPSLGLVSELARR---GHRITYVTTPLFADEVKAAGAEVVLYKSEFD----T---FHVPEVV 70 (402)
T ss_dssp CCCCEEEEECCSS-HHHHHHHHHHHHHHHHT---TCEEEEEECHHHHHHHHHTTCEEEECCCGGG----T---SSSSSSS
T ss_pred CCCCEEEEEeCCC-CcccccHHHHHHHHHhC---CCEEEEEcCHHHHHHHHHcCCEEEecccccc----c---ccccccc
Confidence 3456999998875 89999999999999999 788877653110 01111111110000 0 0000000
Q ss_pred CCcccccc-hh-hhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCccccccc--
Q 036427 217 TAPRVIHQ-SN-FAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFH-- 292 (536)
Q Consensus 217 ~~~~~~~~-~~-~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~-- 292 (536)
........ .. +..........+.+++++++||+||++++.... ...++++.| +|++.+.+++.. +..|..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~-~~~aA~~~g----iP~v~~~~~~~~-~~~~~~~~ 144 (402)
T 3ia7_A 71 KQEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIA-GRLLAARWD----RPAVRLTGGFAA-NEHYSLFK 144 (402)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHH-HHHHHHHHT----CCEEEEESSCCC-BTTBCHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHH-HHHHHHhhC----CCEEEEeccccc-Cccccccc
Confidence 00000000 00 111122334677888899999999997432222 234456666 899877765431 111100
Q ss_pred --------------------------------------ccC-CEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCC
Q 036427 293 --------------------------------------KLV-TRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKP 333 (536)
Q Consensus 293 --------------------------------------~~~-d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~ 333 (536)
... +..++..+...+..... + +.++.++|+++.......
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~-~~~~~~vGp~~~~~~~~~ 222 (402)
T 3ia7_A 145 ELWKSNGQRHPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAET-F-DERFAFVGPTLTGRDGQP 222 (402)
T ss_dssp HHHHHHTCCCGGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGG-C-CTTEEECCCCCCC----C
T ss_pred cccccccccChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCcccc-C-CCCeEEeCCCCCCcccCC
Confidence 000 33333333222211110 1 234566665433211000
Q ss_pred CCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEE
Q 036427 334 VRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQV 413 (536)
Q Consensus 334 ~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~ 413 (536)
. .....++.++|+++.|+.+... .+.+..+.+++. ..+.++++++|.+... +.+. ....++.+
T Consensus 223 ~--------~~~~~~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~-~~~~--~~~~~v~~ 285 (402)
T 3ia7_A 223 G--------WQPPRPDAPVLLVSLGNQFNEH-PEFFRACAQAFA-----DTPWHVVMAIGGFLDP-AVLG--PLPPNVEA 285 (402)
T ss_dssp C--------CCCSSTTCCEEEEECCSCSSCC-HHHHHHHHHHHT-----TSSCEEEEECCTTSCG-GGGC--SCCTTEEE
T ss_pred C--------CcccCCCCCEEEEECCCCCcch-HHHHHHHHHHHh-----cCCcEEEEEeCCcCCh-hhhC--CCCCcEEE
Confidence 0 0111345678888888766544 355666666664 2346777888876321 2222 24578999
Q ss_pred ecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEecc-CCccccCChhhHhhCCceeecC----CHHHHHHHHHHH
Q 036427 414 KGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDF-IAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQW 488 (536)
Q Consensus 414 ~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~-~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~l 488 (536)
.+|+++. ++|..||++|+++|.+|++|||++|+|+|+++. ..+ +..|+..+.+.|.|..+. ++++|++++.++
T Consensus 286 ~~~~~~~-~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~-q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~l 363 (402)
T 3ia7_A 286 HQWIPFH-SVLAHARACLTHGTTGAVLEAFAAGVPLVLVPHFATE-AAPSAERVIELGLGSVLRPDQLEPASIREAVERL 363 (402)
T ss_dssp ESCCCHH-HHHTTEEEEEECCCHHHHHHHHHTTCCEEECGGGCGG-GHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHH
T ss_pred ecCCCHH-HHHhhCCEEEECCCHHHHHHHHHhCCCEEEeCCCccc-HHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHH
Confidence 9999887 999999999999999999999999999999987 554 446899999999998885 799999999999
Q ss_pred hCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 489 FGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 489 l~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
++ |++.+++|++.++++...++++++++.|++++++
T Consensus 364 l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 364 AA-DSAVRERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp HH-CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred Hc-CHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 99 9999999999999999999999999999998865
No 25
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.91 E-value=7.9e-24 Score=220.89 Aligned_cols=350 Identities=13% Similarity=0.110 Sum_probs=192.3
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccc-----cCCCCCCcchh--HHHHHHhhcccccee
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSD-----HTPWPFNQLPR--SYNFLVKHGPLWKMT 213 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~-----~~~~~~~~~~~--~y~~~~~~~~l~~~~ 213 (536)
++.+|||+|++.+. .||..++..|+++|+++ ||+|.++..... ..+..+..+.. .+........ ....
T Consensus 12 ~~~~MrIl~~~~~~-~gh~~~~~~La~~L~~~---GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~ 86 (398)
T 4fzr_A 12 RGSHMRILVIAGCS-EGFVMPLVPLSWALRAA---GHEVLVAASENMGPTVTGAGLPFAPTCPSLDMPEVLSWDR-EGNR 86 (398)
T ss_dssp ---CCEEEEECCSS-HHHHGGGHHHHHHHHHT---TCEEEEEEEGGGHHHHHHTTCCEEEEESSCCHHHHHSBCT-TSCB
T ss_pred CCCceEEEEEcCCC-cchHHHHHHHHHHHHHC---CCEEEEEcCHHHHHHHHhCCCeeEecCCccchHhhhhhhc-cCcc
Confidence 35568999998875 89999999999999999 788877643111 11111111111 0000000000 0000
Q ss_pred ecCC-Cccc-c--cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccc
Q 036427 214 YYGT-APRV-I--HQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPT 289 (536)
Q Consensus 214 ~~~~-~~~~-~--~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~ 289 (536)
+... .... . ....+..........+.+++++++||+||++..... ...+++..| +|++.+.+.+.. ...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~--~~~~a~~~g----iP~v~~~~~~~~-~~~ 159 (398)
T 4fzr_A 87 TTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLT--GPLVAATLG----IPWIEQSIRLAS-PEL 159 (398)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTH--HHHHHHHHT----CCEEEECCSSCC-CHH
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccH--HHHHHHhhC----CCEEEeccCCCC-chh
Confidence 0000 0000 0 000111122234457888899999999998753332 234456666 898877765431 110
Q ss_pred cccccCCEEEEcCHHHHHHHHHhCCCC---CCEEE--eCCCCCCC--------CCCCCC-chHHHHHHcCCCCCCCEEEE
Q 036427 290 WFHKLVTRCYCPTADVAKRAMKAGLQA---SQIKV--YGLPVRPS--------FVKPVR-PKVELRRELGMDEDLPAVLL 355 (536)
Q Consensus 290 ~~~~~~d~vi~~S~~~~~~l~~~g~~~---~ki~v--ignpv~~~--------~~~~~~-~~~~~r~~lgi~~~~~~il~ 355 (536)
+... ......+.+.+++++. ....+ ++..+... .+.+.. ....+...+...++.+.+++
T Consensus 160 ~~~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 232 (398)
T 4fzr_A 160 IKSA-------GVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQPKPGTTKMRYVPYNGRNDQVPSWVFEERKQPRLCL 232 (398)
T ss_dssp HHHH-------HHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC----CCCEECCCCCCCCSSCCCCHHHHSCCSSCEEEC
T ss_pred hhHH-------HHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCCCCCCCCeeeeCCCCCCCCCchhhhcCCCCCEEEE
Confidence 0000 0001111111222220 01111 11100000 010100 00111111112245667777
Q ss_pred ecCCCCCCc-------HHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcC
Q 036427 356 MGGGEGMGP-------IEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACD 428 (536)
Q Consensus 356 ~gg~~g~k~-------~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aD 428 (536)
+.|+..... ..+.+..+.+++.+ .+.++++++|... .+.+.. ..++|.+.||+ ++.++|..||
T Consensus 233 ~~G~~~~~~~~~~~~~~~~~~~~~~~al~~-----~~~~~v~~~~~~~--~~~l~~--~~~~v~~~~~~-~~~~ll~~ad 302 (398)
T 4fzr_A 233 TFGTRVPLPNTNTIPGGLSLLQALSQELPK-----LGFEVVVAVSDKL--AQTLQP--LPEGVLAAGQF-PLSAIMPACD 302 (398)
T ss_dssp C----------------CCSHHHHHHHGGG-----GTCEEEECCCC------------CCTTEEEESCC-CHHHHGGGCS
T ss_pred EccCcccccccccccchHHHHHHHHHHHHh-----CCCEEEEEeCCcc--hhhhcc--CCCcEEEeCcC-CHHHHHhhCC
Confidence 666553211 22334455555542 2466666655442 233332 45799999999 5899999999
Q ss_pred eEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q 036427 429 CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNAL 504 (536)
Q Consensus 429 v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~ 504 (536)
++|+++|++|++|||++|+|+|++|..+++. +|+..+.+.|.|..++ ++++|+++|.++++ |++.+++|++.++
T Consensus 303 ~~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~-~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~ 380 (398)
T 4fzr_A 303 VVVHHGGHGTTLTCLSEGVPQVSVPVIAEVW-DSARLLHAAGAGVEVPWEQAGVESVLAACARIRD-DSSYVGNARRLAA 380 (398)
T ss_dssp EEEECCCHHHHHHHHHTTCCEEECCCSGGGH-HHHHHHHHTTSEEECC-------CHHHHHHHHHH-CTHHHHHHHHHHH
T ss_pred EEEecCCHHHHHHHHHhCCCEEecCCchhHH-HHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHh-CHHHHHHHHHHHH
Confidence 9999999999999999999999998765544 5899999999999886 78899999999999 9999999999999
Q ss_pred HhcCCchHHHHHHHHHH
Q 036427 505 KLARPDAVFRIVQDLHE 521 (536)
Q Consensus 505 ~~a~~~~~~~i~~~i~~ 521 (536)
++....+++++++.+++
T Consensus 381 ~~~~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 381 EMATLPTPADIVRLIEQ 397 (398)
T ss_dssp HHTTSCCHHHHHHHHTC
T ss_pred HHHcCCCHHHHHHHHhc
Confidence 99999999999988753
No 26
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.89 E-value=9.7e-22 Score=204.31 Aligned_cols=353 Identities=10% Similarity=0.034 Sum_probs=204.8
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccc-----cCCCCCCcc-hhHHHH---HHhhccccceee
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSD-----HTPWPFNQL-PRSYNF---LVKHGPLWKMTY 214 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~-----~~~~~~~~~-~~~y~~---~~~~~~l~~~~~ 214 (536)
.|||+|++.+. .||..++..|+++|+++ ||+|.++..... ..+..+..+ ...... .....+......
T Consensus 1 ~MrIl~~~~~~-~gh~~~~~~la~~L~~~---GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (391)
T 3tsa_A 1 HMRVLVVPLPY-PTHLMAMVPLCWALQAS---GHEVLIAAPPELQATAHGAGLTTAGIRGNDRTGDTGGTTQLRFPNPAF 76 (391)
T ss_dssp CCEEEEECCSC-HHHHHTTHHHHHHHHHT---TCEEEEEECHHHHHHHHHBTCEEEEC--------------CCSCCGGG
T ss_pred CcEEEEEcCCC-cchhhhHHHHHHHHHHC---CCEEEEecChhhHHHHHhCCCceeeecCCccchhhhhhhccccccccc
Confidence 38999999874 89999999999999999 788877642110 011111111 000000 000000000000
Q ss_pred cCCCcccccchhhhhhhHHH-------HHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcc
Q 036427 215 YGTAPRVIHQSNFAATSTFI-------AREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCH 287 (536)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~-------~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~ 287 (536)
.. .........+....... ...+.+++++++||+||++..... ...+++..| +|++.+.+++....
T Consensus 77 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~--~~~aa~~~g----iP~v~~~~~~~~~~ 149 (391)
T 3tsa_A 77 GQ-RDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALI--GRVLGGLLD----LPVVLHRWGVDPTA 149 (391)
T ss_dssp GC-TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHH--HHHHHHHTT----CCEEEECCSCCCTT
T ss_pred cc-ccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhH--HHHHHHHhC----CCEEEEecCCcccc
Confidence 00 00000000111112223 567888999999999999853322 234556666 89888776653211
Q ss_pred cccccccCCEEEEcCHHHHHHHHHhCCCCC---CEEEe--CCCCCCC--------CCCCCCchHHHHHHcCCCCCCCEEE
Q 036427 288 PTWFHKLVTRCYCPTADVAKRAMKAGLQAS---QIKVY--GLPVRPS--------FVKPVRPKVELRRELGMDEDLPAVL 354 (536)
Q Consensus 288 ~~~~~~~~d~vi~~S~~~~~~l~~~g~~~~---ki~vi--gnpv~~~--------~~~~~~~~~~~r~~lgi~~~~~~il 354 (536)
..+ .. .........+.+++++.. ...+. +..++.. .+.+..........+...++.+.++
T Consensus 150 ~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~vl 222 (391)
T 3tsa_A 150 GPF-SD------RAHELLDPVCRHHGLTGLPTPELILDPCPPSLQASDAPQGAPVQYVPYNGSGAFPAWGAARTSARRVC 222 (391)
T ss_dssp THH-HH------HHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCTTSCCCEECCCCCCCCCEECCGGGSSCCSSEEEE
T ss_pred ccc-cc------hHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCCCCCccCCeeeecCCCCcCCCchhhcCCCCCEEE
Confidence 100 00 001111222223333311 11111 1111000 0100000000111122234567787
Q ss_pred EecCCCCC-CcH-HHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEE
Q 036427 355 LMGGGEGM-GPI-EATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIIT 432 (536)
Q Consensus 355 ~~gg~~g~-k~~-~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~ 432 (536)
++.|+... +.. ...+.++.+. . ..+++++++++|... .+.+. ....++.+.+|++ ..++|..||++|+
T Consensus 223 v~~G~~~~~~~~~~~~~~~~~~~-~----~~p~~~~v~~~~~~~--~~~l~--~~~~~v~~~~~~~-~~~ll~~ad~~v~ 292 (391)
T 3tsa_A 223 ICMGRMVLNATGPAPLLRAVAAA-T----ELPGVEAVIAVPPEH--RALLT--DLPDNARIAESVP-LNLFLRTCELVIC 292 (391)
T ss_dssp EECCHHHHHHHCSHHHHHHHHHH-H----TSTTEEEEEECCGGG--GGGCT--TCCTTEEECCSCC-GGGTGGGCSEEEE
T ss_pred EEcCCCCCcccchHHHHHHHHHh-c----cCCCeEEEEEECCcc--hhhcc--cCCCCEEEeccCC-HHHHHhhCCEEEe
Confidence 87776532 223 4556666655 4 245777766665432 12222 3457899999985 4678899999999
Q ss_pred CCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC------CHHHHHHHHHHHhCCCHHHHHHHHHHHHHh
Q 036427 433 KAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK------SPKEIANMVSQWFGPKIDELKAMSQNALKL 506 (536)
Q Consensus 433 ~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~------d~~~La~~I~~ll~~d~~~~~~m~~~a~~~ 506 (536)
++|++|++|||++|+|+|++|...++. .|+..+.+.|.|..+. ++++|++++.++++ |++.+++|++.++++
T Consensus 293 ~~G~~t~~Ea~~~G~P~v~~p~~~~q~-~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~ 370 (391)
T 3tsa_A 293 AGGSGTAFTATRLGIPQLVLPQYFDQF-DYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLG-DTGFAAAAIKLSDEI 370 (391)
T ss_dssp CCCHHHHHHHHHTTCCEEECCCSTTHH-HHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHT-CTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCCEEecCCcccHH-HHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHH
Confidence 999999999999999999998866554 5888899999999875 48999999999999 999999999999999
Q ss_pred cCCchHHHHHHHHHHHHhhc
Q 036427 507 ARPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 507 a~~~~~~~i~~~i~~l~~~~ 526 (536)
....+++++++.|++++.++
T Consensus 371 ~~~~~~~~~~~~i~~~~~~~ 390 (391)
T 3tsa_A 371 TAMPHPAALVRTLENTAAIR 390 (391)
T ss_dssp HTSCCHHHHHHHHHHC----
T ss_pred HcCCCHHHHHHHHHHHHhcc
Confidence 99999999999999887653
No 27
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.89 E-value=7.2e-21 Score=206.19 Aligned_cols=217 Identities=16% Similarity=0.123 Sum_probs=157.1
Q ss_pred ccCCEEEEcCHHHHHHHHHh-C--------CCCCCEEEeCCCCCCCCCCCCCc-------------------hHHHHHHc
Q 036427 293 KLVTRCYCPTADVAKRAMKA-G--------LQASQIKVYGLPVRPSFVKPVRP-------------------KVELRREL 344 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~~-g--------~~~~ki~vignpv~~~~~~~~~~-------------------~~~~r~~l 344 (536)
..+|.++++|+..++.+... + ....++.+|+|++|.+.+.+..+ +..+++++
T Consensus 240 ~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~ 319 (536)
T 3vue_A 240 LEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEA 319 (536)
T ss_dssp HHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHT
T ss_pred HhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhc
Confidence 46899999999999987652 2 23568999999999887765321 23456677
Q ss_pred CCC--CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHc--CCCCCCEEEecCh--
Q 036427 345 GMD--EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLS--TDWKIPVQVKGFV-- 417 (536)
Q Consensus 345 gi~--~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~--~~~~~~V~~~G~v-- 417 (536)
|++ ++.|+|+++|+....|++..+++++.+... .+.++ ++.|.++ +..+.++. .....++.+.+..
T Consensus 320 gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~------~~~~l-~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~ 392 (536)
T 3vue_A 320 GLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ------EDVQI-VLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNA 392 (536)
T ss_dssp TSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTT------SSCEE-EEECCBCHHHHHHHHHHHHHSTTTEEEECSCCH
T ss_pred CCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHh------hCCeE-EEEeccCchHHHHHHHHHhhcCCceEEEEeccH
Confidence 775 567899999999888998888888876542 45555 3445543 22222221 2345688888876
Q ss_pred hhHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhCC-cee----------ecC--CHHH
Q 036427 418 SKMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENG-CGK----------FSK--SPKE 480 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g-~g~----------~~~--d~~~ 480 (536)
+++..+|+.||++|+|| | |++++|||+||+|||+++.++..| ++.+| .|+ +++ |+++
T Consensus 393 ~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e------~V~dg~~G~~~~~~~~~g~l~~~~d~~~ 466 (536)
T 3vue_A 393 PLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVD------TVIEGKTGFHMGRLSVDCKVVEPSDVKK 466 (536)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHH------HCCBTTTEEECCCCCSCTTCCCHHHHHH
T ss_pred HHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchh------eeeCCCCccccccCCCceeEECCCCHHH
Confidence 47888999999999998 4 899999999999999999655433 45444 343 333 7899
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 481 IANMVSQWFG--PKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 481 La~~I~~ll~--~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
|+++|+++++ .++ .+++|.+++.+ +.++|+++++++++++++
T Consensus 467 la~ai~ral~~~~~~-~~~~~~~~am~--~~fSW~~~A~~y~~ly~~ 510 (536)
T 3vue_A 467 VAATLKRAIKVVGTP-AYEEMVRNCMN--QDLSWKGPAKNWENVLLG 510 (536)
T ss_dssp HHHHHHHHHHHTTSH-HHHHHHHHHHH--SCCSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCcH-HHHHHHHHHHH--hcCCHHHHHHHHHHHHHH
Confidence 9999987653 144 46677777643 679999999999999876
No 28
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.89 E-value=1.3e-21 Score=213.52 Aligned_cols=337 Identities=11% Similarity=0.003 Sum_probs=214.9
Q ss_pred CCCCCceEEEEeCCCC-chHHHHHHHHHHH--HHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecC
Q 036427 140 ENDQPKKVLILMSDTG-GGHRASAEAIKAA--FHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYG 216 (536)
Q Consensus 140 ~~~~~mKIL~~~~~~G-gGh~~~~l~La~~--L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~ 216 (536)
...++|||++++..++ +|..+....|++. +.+. +++|++.+...... . .+....+... . +..
T Consensus 201 ~~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~---~~~v~~~~~~~~~~----~----~~~~~~~~~~--~--~~~ 265 (568)
T 2vsy_A 201 RSKGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQP---DLQMHLFATSGDDG----S----TLRTRLAQAS--T--LHD 265 (568)
T ss_dssp CSSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCT---TEEEEEEESSCCCS----C----HHHHHHHHTS--E--EEE
T ss_pred CCCCCeEEEEECcccccChHHHHHHHHHhhccCCcc---cEEEEEEECCCCCc----c----HHHHHHHhcC--e--EEE
Confidence 3467799999997753 5778888999999 6665 78998876532100 0 1111111111 1 110
Q ss_pred CCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCccc--chHHHHHHHHcCCCCCceEEEEecCCCC-c-cccccc
Q 036427 217 TAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLM--QHVPLRILRAKGLLKKIVFTTVITDLST-C-HPTWFH 292 (536)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~--~~i~~~~~~~~g~~~~ip~v~~~~d~~~-~-~~~~~~ 292 (536)
... .. ..++.+++++.+||+||.+.... ..+... +. . ..|++...+.+.. . .....+
T Consensus 266 ~~~----------~~---~~~l~~~i~~~~~Div~~~~~~~~~~~~~~~-~~--~---~~~~~~~~~~~~~~~~~~~~~~ 326 (568)
T 2vsy_A 266 VTA----------LG---HLATAKHIRHHGIDLLFDLRGWGGGGRPEVF-AL--R---PAPVQVNWLAYPGTSGAPWMDY 326 (568)
T ss_dssp CTT----------CC---HHHHHHHHHHTTCSEEEECSSCTTCSSCHHH-HT--C---CSSEEEEESSSSSCCCCTTCCE
T ss_pred CCC----------CC---HHHHHHHHHhCCCCEEEECCCCCCcchHHHH-hc--C---CCceeEeeecCCcccCCCCceE
Confidence 000 01 24677889999999999865332 111222 21 1 1344333222211 1 111122
Q ss_pred ccCCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHH
Q 036427 293 KLVTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARAL 372 (536)
Q Consensus 293 ~~~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al 372 (536)
..+|.++++|+...+ + .+++.+++|.+.+....+.......|+++|++++. +++++|+... |+...+++++
T Consensus 327 ~~~d~~i~~s~~~~~----~---~~~i~~ipn~~~~~~~~~~~~~~~~r~~~~~~~~~-~v~~~g~~~~-K~~~~li~a~ 397 (568)
T 2vsy_A 327 VLGDAFALPPALEPF----Y---SEHVLRLQGAFQPSDTSRVVAEPPSRTQCGLPEQG-VVLCCFNNSY-KLNPQSMARM 397 (568)
T ss_dssp EEECTTTSCTTTGGG----C---SSEEEECSSCSCCCCTTCCCCCCCCTGGGTCCTTS-CEEEECCCGG-GCCHHHHHHH
T ss_pred EEECCCcCCcccccC----C---cceeEcCCCcCCCCCCCCCCCCCCCccccCCCCCC-EEEEeCCccc-cCCHHHHHHH
Confidence 345666777765433 2 27799999855443221111223356778887765 4557777766 8888888877
Q ss_pred HHHhhhcccCCCCcEEEEEec-CCH---HHHHHHHcCCCC-CCEEEecChh--hHHHHHhhcCeEEECC--C-hHHHHHH
Q 036427 373 GNALYDENLGEPIGQVLVICG-RNK---KLANKLLSTDWK-IPVQVKGFVS--KMEEAMGACDCIITKA--G-PGTIAEA 442 (536)
Q Consensus 373 ~~~l~~~~~~~~~~~~lvi~G-~~~---~l~~~l~~~~~~-~~V~~~G~v~--~l~~ll~~aDv~V~~s--G-~~tllEA 442 (536)
.+... ..|+.++++ +| .++ ++.+.+++.++. ++|+|+|+++ ++.++|+.||++|.|| | |++++||
T Consensus 398 ~~l~~----~~~~~~l~i-~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~~g~~~lEA 472 (568)
T 2vsy_A 398 LAVLR----EVPDSVLWL-LSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPYNAHTTASDA 472 (568)
T ss_dssp HHHHH----HCTTCEEEE-ECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSSCCSHHHHHH
T ss_pred HHHHH----hCCCcEEEE-ecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCCCCcHHHHHH
Confidence 76554 247777655 45 554 455667777887 8999999995 8999999999999998 4 8999999
Q ss_pred HHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc---CCchHHHHHHH
Q 036427 443 MIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWFGPKIDELKAMSQNALKLA---RPDAVFRIVQD 518 (536)
Q Consensus 443 ma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a---~~~~~~~i~~~ 518 (536)
|+||+|||+.+.........+..+...|...++ +|+++++++|..+++ |++.+++|++++++.+ ..++++++++.
T Consensus 473 ma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~~~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 551 (568)
T 2vsy_A 473 LWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVADDAAFVAKAVALAS-DPAALTALHARVDVLRRASGVFHMDGFADD 551 (568)
T ss_dssp HHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCSSHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHSSTTCHHHHHHH
T ss_pred HhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHhhhcCCCCCHHHHHHH
Confidence 999999999443211111112223333444444 389999999999999 9999999999999987 67899999999
Q ss_pred HHHHHhh
Q 036427 519 LHELVRQ 525 (536)
Q Consensus 519 i~~l~~~ 525 (536)
+.+++++
T Consensus 552 ~~~~y~~ 558 (568)
T 2vsy_A 552 FGALLQA 558 (568)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887764
No 29
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.89 E-value=3.2e-22 Score=208.79 Aligned_cols=353 Identities=14% Similarity=0.097 Sum_probs=199.5
Q ss_pred CCCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccccc-----CCCCCCcchh--HHHHHHh----hc
Q 036427 139 IENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDH-----TPWPFNQLPR--SYNFLVK----HG 207 (536)
Q Consensus 139 ~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~-----~~~~~~~~~~--~y~~~~~----~~ 207 (536)
....++|||+|++.+. .||..+++.|+++|.++ ||+|.+++. ... .++.+..++. .+..... ..
T Consensus 15 ~~~~~~MrIl~~~~~~-~Ghv~~~~~La~~L~~~---GheV~v~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 15 HIEGRHMRVLFVSSPG-IGHLFPLIQLAWGFRTA---GHDVLIAVA-EHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp ----CCCEEEEECCSS-HHHHGGGHHHHHHHHHT---TCEEEEEES-SCHHHHHTTTCEEEESSTTCCHHHHHHHHHHHC
T ss_pred chhhhcCEEEEEcCCC-cchHhHHHHHHHHHHHC---CCEEEEecc-chHHHHHhCCCeeEecCCccCHHHHhhhcccCC
Confidence 3445668999999874 89999999999999999 888877754 210 1111111110 0000000 00
Q ss_pred cccceee--cCCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC
Q 036427 208 PLWKMTY--YGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST 285 (536)
Q Consensus 208 ~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~ 285 (536)
+.+.... ............+..........+.+++++++||+||++..... ...+++..| +|++.+.+.+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~~~--~~~aA~~~g----iP~v~~~~~~~~ 163 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGATV--GLLAADRAG----VPAVQRNQSAWR 163 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTCHH--HHHHHHHHT----CCEEEECCTTCC
T ss_pred ccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchhhH--HHHHHHHcC----CCEEEEeccCCC
Confidence 0000000 00000000000111111223467888999999999998643332 234556666 898876655431
Q ss_pred ccc--ccccccCCEEEEcCHHHHHHHHHhCCC--CCCEEEeCCCC----------CCCCCCCCCchHHHHHHcCCCCCCC
Q 036427 286 CHP--TWFHKLVTRCYCPTADVAKRAMKAGLQ--ASQIKVYGLPV----------RPSFVKPVRPKVELRRELGMDEDLP 351 (536)
Q Consensus 286 ~~~--~~~~~~~d~vi~~S~~~~~~l~~~g~~--~~ki~vignpv----------~~~~~~~~~~~~~~r~~lgi~~~~~ 351 (536)
... ...... ....+.+++++ .....+...+- .+..+.+..........+...++.+
T Consensus 164 ~~~~~~~~~~~----------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (398)
T 3oti_A 164 TRGMHRSIASF----------LTDLMDKHQVSLPEPVATIESFPPSLLLEAEPEGWFMRWVPYGGGAVLGDRLPPVPARP 233 (398)
T ss_dssp CTTHHHHHHTT----------CHHHHHHTTCCCCCCSEEECSSCGGGGTTSCCCSBCCCCCCCCCCEECCSSCCCCCSSC
T ss_pred ccchhhHHHHH----------HHHHHHHcCCCCCCCCeEEEeCCHHHCCCCCCCCCCccccCCCCCcCCchhhhcCCCCC
Confidence 100 000000 00111122221 01111111110 0000100000000111122234567
Q ss_pred EEEEecCCCCCC-cHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeE
Q 036427 352 AVLLMGGGEGMG-PIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCI 430 (536)
Q Consensus 352 ~il~~gg~~g~k-~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~ 430 (536)
.+++++|+.... ...+.+..+.+++. ..++++++++|... .+.+. ....+|.+.||+ ++.++|..||++
T Consensus 234 ~v~v~~G~~~~~~~~~~~~~~~~~~l~-----~~~~~~v~~~g~~~--~~~l~--~~~~~v~~~~~~-~~~~ll~~ad~~ 303 (398)
T 3oti_A 234 EVAITMGTIELQAFGIGAVEPIIAAAG-----EVDADFVLALGDLD--ISPLG--TLPRNVRAVGWT-PLHTLLRTCTAV 303 (398)
T ss_dssp EEEECCTTTHHHHHCGGGHHHHHHHHH-----TSSSEEEEECTTSC--CGGGC--SCCTTEEEESSC-CHHHHHTTCSEE
T ss_pred EEEEEcCCCccccCcHHHHHHHHHHHH-----cCCCEEEEEECCcC--hhhhc--cCCCcEEEEccC-CHHHHHhhCCEE
Confidence 788877766321 11223444444443 23577777776543 11222 346789999999 789999999999
Q ss_pred EECCChHHHHHHHHhCCcEEEeccCCccccCCh--hhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC
Q 036427 431 ITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNV--PYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLAR 508 (536)
Q Consensus 431 V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na--~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~ 508 (536)
|+++|++|++|||++|+|+|++|...++. .|+ ..+.+.|.|..++..+...+.+.++++ |++.+++|++.++++..
T Consensus 304 v~~~G~~t~~Eal~~G~P~v~~p~~~dq~-~~a~~~~~~~~g~g~~~~~~~~~~~~l~~ll~-~~~~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 304 VHHGGGGTVMTAIDAGIPQLLAPDPRDQF-QHTAREAVSRRGIGLVSTSDKVDADLLRRLIG-DESLRTAAREVREEMVA 381 (398)
T ss_dssp EECCCHHHHHHHHHHTCCEEECCCTTCCS-SCTTHHHHHHHTSEEECCGGGCCHHHHHHHHH-CHHHHHHHHHHHHHHHT
T ss_pred EECCCHHHHHHHHHhCCCEEEcCCCchhH-HHHHHHHHHHCCCEEeeCCCCCCHHHHHHHHc-CHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998866554 588 999999999988622222333348888 99999999999999999
Q ss_pred CchHHHHHHHHHHHHh
Q 036427 509 PDAVFRIVQDLHELVR 524 (536)
Q Consensus 509 ~~~~~~i~~~i~~l~~ 524 (536)
..+++++++.|++++.
T Consensus 382 ~~~~~~~~~~l~~l~~ 397 (398)
T 3oti_A 382 LPTPAETVRRIVERIS 397 (398)
T ss_dssp SCCHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHhc
Confidence 9999999999988764
No 30
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.88 E-value=1.6e-20 Score=197.57 Aligned_cols=166 Identities=18% Similarity=0.188 Sum_probs=135.2
Q ss_pred CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhc
Q 036427 348 EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGAC 427 (536)
Q Consensus 348 ~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~a 427 (536)
++.+++++++|+.+ ....+.+..+++++. ..+.++++++|.+.+. +.+. ...+++.+.+|+++. ++|..|
T Consensus 253 ~~~~~v~v~~Gs~~-~~~~~~~~~~~~al~-----~~~~~~~~~~g~~~~~-~~~~--~~~~~v~~~~~~~~~-~~l~~~ 322 (424)
T 2iya_A 253 DGRPVLLIALGSAF-TDHLDFYRTCLSAVD-----GLDWHVVLSVGRFVDP-ADLG--EVPPNVEVHQWVPQL-DILTKA 322 (424)
T ss_dssp SSCCEEEEECCSSS-CCCHHHHHHHHHHHT-----TCSSEEEEECCTTSCG-GGGC--SCCTTEEEESSCCHH-HHHTTC
T ss_pred CCCCEEEEEcCCCC-cchHHHHHHHHHHHh-----cCCcEEEEEECCcCCh-HHhc--cCCCCeEEecCCCHH-HHHhhC
Confidence 34678888888776 334556666776664 3557777888875421 1122 245789999999887 899999
Q ss_pred CeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 428 DCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 428 Dv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
|++|+++|.+|++||+++|+|+|++|...+| ..|++.+.+.|.|..+. ++++|+++|+++++ |++.++++++.+
T Consensus 323 d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ-~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~ 400 (424)
T 2iya_A 323 SAFITHAGMGSTMEALSNAVPMVAVPQIAEQ-TMNAERIVELGLGRHIPRDQVTAEKLREAVLAVAS-DPGVAERLAAVR 400 (424)
T ss_dssp SEEEECCCHHHHHHHHHTTCCEEECCCSHHH-HHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHH-CHHHHHHHHHHH
T ss_pred CEEEECCchhHHHHHHHcCCCEEEecCccch-HHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHc-CHHHHHHHHHHH
Confidence 9999999999999999999999999987665 45899999999998886 89999999999999 999999999999
Q ss_pred HHhcCCchHHHHHHHHHHHHhh
Q 036427 504 LKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 504 ~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
.+.....+.+++++.|++++++
T Consensus 401 ~~~~~~~~~~~~~~~i~~~~~~ 422 (424)
T 2iya_A 401 QEIREAGGARAAADILEGILAE 422 (424)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCcHHHHHHHHHHHHhc
Confidence 9988889999999999988764
No 31
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.87 E-value=9.7e-20 Score=188.84 Aligned_cols=345 Identities=13% Similarity=0.069 Sum_probs=199.9
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccc-----cCCCCCCcchhH-HHHHHhhcccccee-ecCC
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSD-----HTPWPFNQLPRS-YNFLVKHGPLWKMT-YYGT 217 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~-----~~~~~~~~~~~~-y~~~~~~~~l~~~~-~~~~ 217 (536)
|||+|++.+. +||..++++|+++|.++ ||+|.++..... ..++.+..++.. +........ .... ....
T Consensus 1 MrIl~~~~~~-~Gh~~p~~~la~~L~~~---Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 75 (384)
T 2p6p_A 1 MRILFVAAGS-PATVFALAPLATAARNA---GHQVVMAANQDMGPVVTGVGLPAVATTDLPIRHFITTDR-EGRPEAIPS 75 (384)
T ss_dssp CEEEEECCSS-HHHHHHHHHHHHHHHHT---TCEEEEEECGGGHHHHHHTTCCEEESCSSCHHHHHHBCT-TSCBCCCCC
T ss_pred CEEEEEeCCc-cchHhHHHHHHHHHHHC---CCEEEEEeCHHHHHHHHhCCCEEEEeCCcchHHHHhhhc-ccCccccCc
Confidence 7999987765 89999999999999998 788877643211 011111111110 000000000 0000 0000
Q ss_pred Cccccc---chhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCccc------
Q 036427 218 APRVIH---QSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHP------ 288 (536)
Q Consensus 218 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~------ 288 (536)
...... ...+..........+.+++++++||+||++..... ...+++..| +|++.+.++......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~--~~~~a~~~g----iP~v~~~~~~~~~~~~~~~~~ 149 (384)
T 2p6p_A 76 DPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYV--APLLALHLG----VPHARQTWDAVDADGIHPGAD 149 (384)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTH--HHHHHHHHT----CCEEEECCSSCCCTTTHHHHH
T ss_pred chHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhh--HHHHHHhcC----CCEEEeccCCcccchhhHHHH
Confidence 000000 00000011123457778889999999999865322 234566666 898866544321000
Q ss_pred ----cccccc-------CCEEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEec
Q 036427 289 ----TWFHKL-------VTRCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMG 357 (536)
Q Consensus 289 ----~~~~~~-------~d~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~g 357 (536)
.+..+. ++.+++.+....+... ..+..++..+ +. .......++. .-.++.+++++++
T Consensus 150 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~--~~-----~~~~~~~~~l---~~~~~~~~v~v~~ 217 (384)
T 2p6p_A 150 AELRPELSELGLERLPAPDLFIDICPPSLRPAN--AAPARMMRHV--AT-----SRQCPLEPWM---YTRDTRQRVLVTS 217 (384)
T ss_dssp HHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT--SCCCEECCCC--CC-----CCCCBCCHHH---HCCCSSCEEEEEC
T ss_pred HHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC--CCCCCceEec--CC-----CCCCCCCchh---hcCCCCCEEEEEC
Confidence 000000 2333333322111000 0000000000 00 0001111221 1123456777777
Q ss_pred CCCCCC---c-HHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEEC
Q 036427 358 GGEGMG---P-IEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITK 433 (536)
Q Consensus 358 g~~g~k---~-~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~ 433 (536)
|+.+.. + ..+.+..+++++. ..+.++++++|.. ..+.++. ..++|.+ ||++ ..++|..||++|++
T Consensus 218 Gs~~~~~~~~~~~~~~~~~~~al~-----~~~~~~~~~~g~~--~~~~l~~--~~~~v~~-~~~~-~~~~l~~~d~~v~~ 286 (384)
T 2p6p_A 218 GSRVAKESYDRNFDFLRGLAKDLV-----RWDVELIVAAPDT--VAEALRA--EVPQARV-GWTP-LDVVAPTCDLLVHH 286 (384)
T ss_dssp SSSSSCCSSCCCCTTHHHHHHHHH-----TTTCEEEEECCHH--HHHHHHH--HCTTSEE-ECCC-HHHHGGGCSEEEEC
T ss_pred CCCCccccccccHHHHHHHHHHHh-----cCCcEEEEEeCCC--CHHhhCC--CCCceEE-cCCC-HHHHHhhCCEEEeC
Confidence 765542 1 1122333334443 2346777766642 2233332 3468999 9985 68899999999999
Q ss_pred CChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC
Q 036427 434 AGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNALKLARP 509 (536)
Q Consensus 434 sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~ 509 (536)
+|++|++|||++|+|+|++|..++|. .|+..+.+.|.|..++ ++++|+++|.++++ |++.+++|++.+.++...
T Consensus 287 ~G~~t~~Ea~~~G~P~v~~p~~~dq~-~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~ 364 (384)
T 2p6p_A 287 AGGVSTLTGLSAGVPQLLIPKGSVLE-APARRVADYGAAIALLPGEDSTEAIADSCQELQA-KDTYARRAQDLSREISGM 364 (384)
T ss_dssp SCTTHHHHHHHTTCCEEECCCSHHHH-HHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHTS
T ss_pred CcHHHHHHHHHhCCCEEEccCcccch-HHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999866554 5889899999998875 78999999999999 999999999999999999
Q ss_pred chHHHHHHHHHHHHhh
Q 036427 510 DAVFRIVQDLHELVRQ 525 (536)
Q Consensus 510 ~~~~~i~~~i~~l~~~ 525 (536)
.+.+++++.|..++..
T Consensus 365 ~~~~~~~~~i~~~~~~ 380 (384)
T 2p6p_A 365 PLPATVVTALEQLAHH 380 (384)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhh
Confidence 9999999999988754
No 32
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.86 E-value=2.4e-20 Score=193.46 Aligned_cols=312 Identities=11% Similarity=0.070 Sum_probs=196.4
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
.+|+|.+.+. |..+.+..|+++|.++ + +|.++...... +....+..+....+...+.
T Consensus 41 ~~iwih~~s~--G~~~~~~~L~~~L~~~---~-~v~v~~~~~~~-----------~~~~~~~~~~v~~~~~~p~------ 97 (374)
T 2xci_A 41 GALWVHTASI--GEFNTFLPILKELKRE---H-RILLTYFSPRA-----------REYLKTKSDFYDCLHPLPL------ 97 (374)
T ss_dssp TCEEEECSSH--HHHHHHHHHHHHHHHH---S-CEEEEESCGGG-----------HHHHHTTGGGCSEEEECCC------
T ss_pred CCEEEEcCCH--HHHHHHHHHHHHHHhc---C-CEEEEEcCCcH-----------HHHHHHhcccccceeECCC------
Confidence 4799998886 7788999999999998 5 67655432110 0000000000000000000
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCC-cccccccccCCEEEEcCH
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLST-CHPTWFHKLVTRCYCPTA 303 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~-~~~~~~~~~~d~vi~~S~ 303 (536)
. ....+.+++++++||+||+...... |..+. ... + |++.+...+.. ...+++.+.+|.++++|+
T Consensus 98 -----~---~~~~l~~~l~~~~pDiv~~~~~~~~--~~~~~-~~~---~-p~~~~~~~~~~~~~~~~~~~~~d~ii~~S~ 162 (374)
T 2xci_A 98 -----D---NPFSVKRFEELSKPKALIVVEREFW--PSLII-FTK---V-PKILVNAYAKGSLIEKILSKKFDLIIMRTQ 162 (374)
T ss_dssp -----S---SHHHHHHHHHHHCCSEEEEESCCCC--HHHHH-HCC---S-CEEEEEECCCCCHHHHHHHTTCSEEEESCH
T ss_pred -----C---CHHHHHHHHHHhCCCEEEEECccCc--HHHHH-HHh---C-CEEEEEeecCchHHHHHHHHhCCEEEECCH
Confidence 0 1236778899999999997543221 22222 222 2 65544444321 123466788999999999
Q ss_pred HHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCC
Q 036427 304 DVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGE 383 (536)
Q Consensus 304 ~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~ 383 (536)
..++.+.+.|++ ++.++||+..+.... +.. .+. .++++ .++. ..++...+++++....+ ..
T Consensus 163 ~~~~~l~~~g~~--ki~vi~n~~f~~~~~---~~~------~l~--~~vi~-~~~~-~~k~~~~ll~A~~~l~~----~~ 223 (374)
T 2xci_A 163 EDVEKFKTFGAK--RVFSCGNLKFICQKG---KGI------KLK--GEFIV-AGSI-HTGEVEIILKAFKEIKK----TY 223 (374)
T ss_dssp HHHHHHHTTTCC--SEEECCCGGGCCCCC---SCC------CCS--SCEEE-EEEE-CGGGHHHHHHHHHHHHT----TC
T ss_pred HHHHHHHHcCCC--eEEEcCCCccCCCcC---hhh------hhc--CCEEE-EEeC-CCchHHHHHHHHHHHHh----hC
Confidence 999999888876 899999873211110 010 011 24443 3333 34556666666654432 35
Q ss_pred CCcEEEEEecCCH----HHHHHHHcCCCC--------CCEEEecChhhHHHHHhhcCeEEECC-----ChHHHHHHHHhC
Q 036427 384 PIGQVLVICGRNK----KLANKLLSTDWK--------IPVQVKGFVSKMEEAMGACDCIITKA-----GPGTIAEAMIRG 446 (536)
Q Consensus 384 ~~~~~lvi~G~~~----~l~~~l~~~~~~--------~~V~~~G~v~~l~~ll~~aDv~V~~s-----G~~tllEAma~G 446 (536)
+++++++ +|.++ ++.+.+++.++. .+|.+.|+.+++..+|+.||+++++| |+.+++|||+||
T Consensus 224 p~~~lvi-vG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G 302 (374)
T 2xci_A 224 SSLKLIL-VPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWG 302 (374)
T ss_dssp TTCEEEE-EESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTT
T ss_pred CCcEEEE-ECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhC
Confidence 6777544 46664 345556666554 47899998899999999999988764 478999999999
Q ss_pred CcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCc--hHHHHHH
Q 036427 447 LPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPD--AVFRIVQ 517 (536)
Q Consensus 447 lPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~--~~~~i~~ 517 (536)
+|||+++..++..+ ....+.+.|.+..+.|+++|+++|.++++ | +.+++|+++|++++.+. ..+++++
T Consensus 303 ~PVI~~~~~~~~~e-~~~~~~~~G~l~~~~d~~~La~ai~~ll~-d-~~r~~mg~~ar~~~~~~~ga~~~~~~ 372 (374)
T 2xci_A 303 IPVIYGPYTHKVND-LKEFLEKEGAGFEVKNETELVTKLTELLS-V-KKEIKVEEKSREIKGCYLEKLREFLR 372 (374)
T ss_dssp CCEEECSCCTTSHH-HHHHHHHTTCEEECCSHHHHHHHHHHHHH-S-CCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECCCccChHH-HHHHHHHCCCEEEeCCHHHHHHHHHHHHh-H-HHHHHHHHHHHHHHHhcccHHHHHHh
Confidence 99998754332111 12223456766677899999999999999 9 99999999999987552 4444443
No 33
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.86 E-value=3.1e-20 Score=195.06 Aligned_cols=163 Identities=20% Similarity=0.144 Sum_probs=126.5
Q ss_pred CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhc
Q 036427 348 EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGAC 427 (536)
Q Consensus 348 ~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~a 427 (536)
.+++++++++|+.+ ...+.+..+.+++.+ .+.++++++|.+... .....+++.+.+|+++ .++|..|
T Consensus 236 ~~~~~v~v~~Gs~~--~~~~~~~~~~~al~~-----~~~~~v~~~g~~~~~-----~~~~~~~v~~~~~~~~-~~~l~~~ 302 (415)
T 1iir_A 236 AGPPPVYLGFGSLG--APADAVRVAIDAIRA-----HGRRVILSRGWADLV-----LPDDGADCFAIGEVNH-QVLFGRV 302 (415)
T ss_dssp TSSCCEEEECC-----CCHHHHHHHHHHHHH-----TTCCEEECTTCTTCC-----CSSCGGGEEECSSCCH-HHHGGGS
T ss_pred hCCCeEEEeCCCCC--CcHHHHHHHHHHHHH-----CCCeEEEEeCCCccc-----ccCCCCCEEEeCcCCh-HHHHhhC
Confidence 34467777777764 223444455555542 235677777865411 1234468999999976 5789999
Q ss_pred CeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 428 DCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 428 Dv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
|++|+++|.+|++||+++|+|+|++|..++|. .|+..+.+.|.|..+. ++++|.++|.++ + |++.++++++.+
T Consensus 303 d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~-~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~-~~~~~~~~~~~~ 379 (415)
T 1iir_A 303 AAVIHHGGAGTTHVAARAGAPQILLPQMADQP-YYAGRVAELGVGVAHDGPIPTFDSLSAALATA-L-TPETHARATAVA 379 (415)
T ss_dssp SEEEECCCHHHHHHHHHHTCCEEECCCSTTHH-HHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-T-SHHHHHHHHHHH
T ss_pred CEEEeCCChhHHHHHHHcCCCEEECCCCCccH-HHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-c-CHHHHHHHHHHH
Confidence 99999999999999999999999999877665 5899999999998875 789999999999 8 999999999999
Q ss_pred HHhcCCchHHHHHHHHHHHHhhc
Q 036427 504 LKLARPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 504 ~~~a~~~~~~~i~~~i~~l~~~~ 526 (536)
+++...++.+++++.|+++++++
T Consensus 380 ~~~~~~~~~~~~~~~i~~~~~~~ 402 (415)
T 1iir_A 380 GTIRTDGAAVAARLLLDAVSREK 402 (415)
T ss_dssp HHSCSCHHHHHHHHHHHHHHTC-
T ss_pred HHHhhcChHHHHHHHHHHHHhcc
Confidence 99988999999999999988754
No 34
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.86 E-value=1.5e-21 Score=202.96 Aligned_cols=273 Identities=12% Similarity=0.048 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCc--------ccccccccCCEEEEcCHH
Q 036427 233 FIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTC--------HPTWFHKLVTRCYCPTAD 304 (536)
Q Consensus 233 ~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~--------~~~~~~~~~d~vi~~S~~ 304 (536)
....++.+++++++||+|++++......+...+++.+ ||++.+....... .+.++.+.+|.++++++.
T Consensus 81 ~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~----IPv~h~eaglrs~~~~~pee~nR~~~~~~a~~~~~~te~ 156 (385)
T 4hwg_A 81 LVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRK----IPIFHMEAGNRCFDQRVPEEINRKIIDHISDVNITLTEH 156 (385)
T ss_dssp HHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTT----CCEEEESCCCCCSCTTSTHHHHHHHHHHHCSEEEESSHH
T ss_pred HHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhC----CCEEEEeCCCccccccCcHHHHHHHHHhhhceeecCCHH
Confidence 3556888999999999999988654443445566665 9987665543211 123446788999999999
Q ss_pred HHHHHHHhCCCCCCEEEeCCCCCCCCCCC--CCchHHHHHHcCCCCCCCEEEEecCCCCC----CcHHHHHHHHHHHhhh
Q 036427 305 VAKRAMKAGLQASQIKVYGLPVRPSFVKP--VRPKVELRRELGMDEDLPAVLLMGGGEGM----GPIEATARALGNALYD 378 (536)
Q Consensus 305 ~~~~l~~~g~~~~ki~vignpv~~~~~~~--~~~~~~~r~~lgi~~~~~~il~~gg~~g~----k~~~~~l~al~~~l~~ 378 (536)
.++.+.+.|++++++.++|||+.+..... ...++++++++|+++ .+++++++++... +.+..+++++.+...
T Consensus 157 ~~~~l~~~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~- 234 (385)
T 4hwg_A 157 ARRYLIAEGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIK- 234 (385)
T ss_dssp HHHHHHHTTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHcCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHh-
Confidence 99999999999999999999875533211 112345778899976 4677777765432 223344444433221
Q ss_pred cccCCCCcEEEEEecCCHHHHHHHHcC-C-C--CCCEEEecChh--hHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEe
Q 036427 379 ENLGEPIGQVLVICGRNKKLANKLLST-D-W--KIPVQVKGFVS--KMEEAMGACDCIITKAGPGTIAEAMIRGLPIILN 452 (536)
Q Consensus 379 ~~~~~~~~~~lvi~G~~~~l~~~l~~~-~-~--~~~V~~~G~v~--~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~ 452 (536)
.. ++.+++..+ +...+.+++. + . .++|.+++..+ ++..+|+.||++|+.||+ ...||+++|+|+|++
T Consensus 235 ---~~-~~~vv~p~~--p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~SGg-v~~EA~alG~Pvv~~ 307 (385)
T 4hwg_A 235 ---EY-NFLIIFSTH--PRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDSGT-ITEEASILNLPALNI 307 (385)
T ss_dssp ---HH-CCEEEEEEC--HHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECCTT-HHHHHHHTTCCEEEC
T ss_pred ---cC-CeEEEEECC--hHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECCcc-HHHHHHHcCCCEEEc
Confidence 11 455554443 5566666665 3 2 35899977653 789999999999999986 469999999999998
Q ss_pred ccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhCCCHHHHHHHHHHHHHh-cCCchHHHHHHHHHHHHh
Q 036427 453 DFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFGPKIDELKAMSQNALKL-ARPDAVFRIVQDLHELVR 524 (536)
Q Consensus 453 ~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~~d~~~~~~m~~~a~~~-a~~~~~~~i~~~i~~l~~ 524 (536)
+.....+ +.++.|.+.++. |+++|.+++..+++ |++.++.|++++..+ ...+++++|++.|.+.+.
T Consensus 308 ~~~ter~-----e~v~~G~~~lv~~d~~~i~~ai~~ll~-d~~~~~~m~~~~~~~~g~g~aa~rI~~~l~~~~~ 375 (385)
T 4hwg_A 308 REAHERP-----EGMDAGTLIMSGFKAERVLQAVKTITE-EHDNNKRTQGLVPDYNEAGLVSKKILRIVLSYVD 375 (385)
T ss_dssp SSSCSCT-----HHHHHTCCEECCSSHHHHHHHHHHHHT-TCBTTBCCSCCCHHHHTCCCHHHHHHHHHHHHHH
T ss_pred CCCccch-----hhhhcCceEEcCCCHHHHHHHHHHHHh-ChHHHHHhhccCCCCCCCChHHHHHHHHHHHHhh
Confidence 7543222 257778888885 99999999999999 888888888888888 899999999999988764
No 35
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.86 E-value=2e-20 Score=194.66 Aligned_cols=351 Identities=12% Similarity=0.054 Sum_probs=199.3
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccc----cCCCCCCcc----hhHHHHHHhhcccccee
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSD----HTPWPFNQL----PRSYNFLVKHGPLWKMT 213 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~----~~~~~~~~~----~~~y~~~~~~~~l~~~~ 213 (536)
-+.|||||++.+. .||..++++||++|.++ ||+|.+++.... ..+..+..+ .................
T Consensus 20 ~~~MRIL~~~~p~-~GHv~P~l~LA~~L~~r---Gh~Vt~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (400)
T 4amg_A 20 FQSMRALFITSPG-LSHILPTVPLAQALRAL---GHEVRYATGGDIRAVAEAGLCAVDVSPGVNYAKLFVPDDTDVTDPM 95 (400)
T ss_dssp -CCCEEEEECCSS-HHHHGGGHHHHHHHHHT---TCEEEEEECSSTHHHHTTTCEEEESSTTCCSHHHHSCCC-------
T ss_pred CCCCeEEEECCCc-hhHHHHHHHHHHHHHHC---CCEEEEEeCcchhhHHhcCCeeEecCCchhHhhhcccccccccccc
Confidence 3558999998776 79999999999999999 888877643211 001100000 00000000000000000
Q ss_pred ecCCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCccc-----
Q 036427 214 YYGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHP----- 288 (536)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~----- 288 (536)
.............+..........+.+.+++++||+||++...... ..+++..| +|.+.+........+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~--~~~A~~~g----ip~~~~~~~~~~~~~~~~~~ 169 (400)
T 4amg_A 96 HSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAG--PLTAAALQ----LPCVELPLGPADSEPGLGAL 169 (400)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHH--HHHHHHTT----CCEEECCSSTTTCCHHHHHH
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHH--HHHHHHcC----CCceeecccccccccchhhH
Confidence 0000000000011111222334566778899999999988655432 34566666 887765443321111
Q ss_pred --ccc-----------cccCCEEEEcCHHHHHHHHHhCC-CCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEE
Q 036427 289 --TWF-----------HKLVTRCYCPTADVAKRAMKAGL-QASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVL 354 (536)
Q Consensus 289 --~~~-----------~~~~d~vi~~S~~~~~~l~~~g~-~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il 354 (536)
+++ ....+..+............... .+.....-+.+.... ......+...++.++|+
T Consensus 170 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~v~ 241 (400)
T 4amg_A 170 IRRAMSKDYERHGVTGEPTGSVRLTTTPPSVEALLPEDRRSPGAWPMRYVPYNGG--------AVLPDWLPPAAGRRRIA 241 (400)
T ss_dssp HHHHTHHHHHHTTCCCCCSCEEEEECCCHHHHHTSCGGGCCTTCEECCCCCCCCC--------EECCTTCSCCTTCCEEE
T ss_pred HHHHHHHHHHHhCCCcccccchhhcccCchhhccCcccccCCcccCccccccccc--------ccCcccccccCCCcEEE
Confidence 000 01111222233222221110000 001110000000000 00001223345667888
Q ss_pred EecCCCCC-CcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEEC
Q 036427 355 LMGGGEGM-GPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITK 433 (536)
Q Consensus 355 ~~gg~~g~-k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~ 433 (536)
+++|+... ....+.+..+.+.+. ..+.++++..+.... + ......+++.+.+|++ ..++|..||++|++
T Consensus 242 vs~Gs~~~~~~~~~~~~~~~~~l~-----~~~~~~v~~~~~~~~--~--~~~~~~~~v~~~~~~p-~~~lL~~~~~~v~h 311 (400)
T 4amg_A 242 VTLGSIDALSGGIAKLAPLFSEVA-----DVDAEFVLTLGGGDL--A--LLGELPANVRVVEWIP-LGALLETCDAIIHH 311 (400)
T ss_dssp ECCCSCC--CCSSSTTHHHHHHGG-----GSSSEEEEECCTTCC--C--CCCCCCTTEEEECCCC-HHHHHTTCSEEEEC
T ss_pred EeCCcccccCccHHHHHHHHHHhh-----ccCceEEEEecCccc--c--ccccCCCCEEEEeecC-HHHHhhhhhheecc
Confidence 87776543 222233444555554 345666666554421 0 1123567899999995 57899999999999
Q ss_pred CChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHH
Q 036427 434 AGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVF 513 (536)
Q Consensus 434 sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~ 513 (536)
+|.+|++||+++|+|+|+.|..++|.. |+..+++.|.|..+++.+.++++|+++|+ |+++|+++++.++++....+..
T Consensus 312 ~G~~s~~Eal~~GvP~v~~P~~~dQ~~-na~~v~~~G~g~~l~~~~~~~~al~~lL~-d~~~r~~a~~l~~~~~~~~~~~ 389 (400)
T 4amg_A 312 GGSGTLLTALAAGVPQCVIPHGSYQDT-NRDVLTGLGIGFDAEAGSLGAEQCRRLLD-DAGLREAALRVRQEMSEMPPPA 389 (400)
T ss_dssp CCHHHHHHHHHHTCCEEECCC---CHH-HHHHHHHHTSEEECCTTTCSHHHHHHHHH-CHHHHHHHHHHHHHHHTSCCHH
T ss_pred CCccHHHHHHHhCCCEEEecCcccHHH-HHHHHHHCCCEEEcCCCCchHHHHHHHHc-CHHHHHHHHHHHHHHHcCCCHH
Confidence 999999999999999999998877664 89999999999999877778889999999 9999999999999888888899
Q ss_pred HHHHHHHHH
Q 036427 514 RIVQDLHEL 522 (536)
Q Consensus 514 ~i~~~i~~l 522 (536)
++++.|+++
T Consensus 390 ~~a~~le~l 398 (400)
T 4amg_A 390 ETAAXLVAL 398 (400)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988875
No 36
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.85 E-value=3.9e-20 Score=195.86 Aligned_cols=169 Identities=16% Similarity=0.172 Sum_probs=126.3
Q ss_pred CCCCCEEEEecCCCCCC--cHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHH
Q 036427 347 DEDLPAVLLMGGGEGMG--PIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAM 424 (536)
Q Consensus 347 ~~~~~~il~~gg~~g~k--~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll 424 (536)
.++.++|++++|+.+.. ...+.+..+++++. ..+.++++++|... . +.++ ...++|.+.+|+++ .++|
T Consensus 264 ~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~-----~~~~~~v~~~g~~~-~-~~l~--~~~~~v~~~~~~~~-~~ll 333 (441)
T 2yjn_A 264 EPERRRVCLTLGISSRENSIGQVSIEELLGAVG-----DVDAEIIATFDAQQ-L-EGVA--NIPDNVRTVGFVPM-HALL 333 (441)
T ss_dssp CCSSCEEEEEC----------CCSTTTTHHHHH-----TSSSEEEECCCTTT-T-SSCS--SCCSSEEECCSCCH-HHHG
T ss_pred CCCCCEEEEECCCCcccccChHHHHHHHHHHHH-----cCCCEEEEEECCcc-h-hhhc--cCCCCEEEecCCCH-HHHH
Confidence 34567788888876542 11222333333333 23467777666432 1 1111 34568999999986 7899
Q ss_pred hhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHH
Q 036427 425 GACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMS 500 (536)
Q Consensus 425 ~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~ 500 (536)
..||++|+++|++|++|||++|+|+|++|..++|. .|++.+.+.|.|..+. ++++|+++|.++++ |++.+++|+
T Consensus 334 ~~ad~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~-~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~ 411 (441)
T 2yjn_A 334 PTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTG-VRAQRTQEFGAGIALPVPELTPDQLRESVKRVLD-DPAHRAGAA 411 (441)
T ss_dssp GGCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHH-HHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHH-CHHHHHHHH
T ss_pred hhCCEEEECCCHHHHHHHHHhCCCEEEeCCcccHH-HHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhc-CHHHHHHHH
Confidence 99999999999999999999999999999865554 5899999999998875 78999999999999 999999999
Q ss_pred HHHHHhcCCchHHHHHHHHHHHHhhcC
Q 036427 501 QNALKLARPDAVFRIVQDLHELVRQRN 527 (536)
Q Consensus 501 ~~a~~~a~~~~~~~i~~~i~~l~~~~~ 527 (536)
+.++++...++.+++++.|+++++++.
T Consensus 412 ~~~~~~~~~~~~~~~~~~i~~~~~~~~ 438 (441)
T 2yjn_A 412 RMRDDMLAEPSPAEVVGICEELAAGRR 438 (441)
T ss_dssp HHHHHHHTSCCHHHHHHHHHHHHHC--
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999887643
No 37
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.84 E-value=3.7e-21 Score=202.13 Aligned_cols=327 Identities=11% Similarity=0.058 Sum_probs=189.0
Q ss_pred CCCceEEEEeCCCC----chHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCC
Q 036427 142 DQPKKVLILMSDTG----GGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGT 217 (536)
Q Consensus 142 ~~~mKIL~~~~~~G----gGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~ 217 (536)
.++|||++++.... .|..+.+..|+++|.++ ||+|.|++.... + ... . .... +.+...+...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~---GheV~Vvt~~~~--~----~~~-~---~~~~-~~~~~~~~~~ 109 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNK---KFKKRIILTDAT--P----NPK-D---LQSF-KSFKYVMPEE 109 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTT---TCEEEEEESSCC--C----CHH-H---HGGG-TTSEECCTTC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHc---CCceEEEEecCC--C----ChH-H---HHhh-hccceeeccC
Confidence 46689999986532 14446789999999998 888887765321 0 000 0 0111 0010000000
Q ss_pred CcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHH----HcCCCCCceEEEEecCCCCcc-c----
Q 036427 218 APRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILR----AKGLLKKIVFTTVITDLSTCH-P---- 288 (536)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~----~~g~~~~ip~v~~~~d~~~~~-~---- 288 (536)
........ ..+.. .+...++..+||+||+++...........+ ..+.. +.+.+.+++++.... +
T Consensus 110 ~~~~~~~i-~~~~~-----~~~~~~~~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~ 182 (413)
T 2x0d_A 110 DKDFALQI-VPFND-----RYNRTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTYGIP-PNKILYIIQDFEPGFYQWSSQ 182 (413)
T ss_dssp CCCCSEEE-EECSC-----CTTCCEEECTTEEEEECSHHHHHHHHHHHHHHHHHHTCC-CCCEEEEECSCGGGGSCSSHH
T ss_pred Ccccccee-eeccc-----cccccccCCCCCEEEEehHHHHHHHHHhhhhhhhhcccc-cCcEEEEEeechhhcCccChH
Confidence 00000000 00000 000111224699999886432111111111 11211 256666666654211 1
Q ss_pred ----ccccccCC--EEEEcCHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCC-
Q 036427 289 ----TWFHKLVT--RCYCPTADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEG- 361 (536)
Q Consensus 289 ----~~~~~~~d--~vi~~S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g- 361 (536)
.+.++.++ .++++|+..++.+.+.|++..++.+++++++.+.+.+. .. ..++.+.++++|+...
T Consensus 183 ~~~~~~~~~~~~~~~vi~~S~~~~~~l~~~g~~~~~~~~i~~g~d~~~~~~~--------~~-~~~~~~~il~~gr~~~~ 253 (413)
T 2x0d_A 183 YVLAESTYKYRGPQIAVFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYI--------ND-KRQKEKIILVYGRPSVK 253 (413)
T ss_dssp HHHHHHTTSCCSCEEEEEESHHHHHHHHHHTCCCSEEEEECCCCCHHHHTTT--------TS-CCCCCSEEEEEECTTCG
T ss_pred HHHHHHHhccCCceEEEEcCHHHHHHHHHcCCCCCceEEeCCCcCchhhccc--------cc-ccCCCCEEEEEecCchh
Confidence 12334444 58899999999999888876778899998876533211 01 1234567888888643
Q ss_pred CCcHHHHHHHHHHHhhhcccCCCC---cEEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC--
Q 036427 362 MGPIEATARALGNALYDENLGEPI---GQVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA-- 434 (536)
Q Consensus 362 ~k~~~~~l~al~~~l~~~~~~~~~---~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s-- 434 (536)
.|....+++++..... ..++ +++ +++|.+++. .+++...+|+|+|++ +++.++|+.||++|+||
T Consensus 254 ~Kg~~~li~A~~~l~~----~~~~~~~~~l-~ivG~~~~~----~~l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~ 324 (413)
T 2x0d_A 254 RNAFTLIVEALKIFVQ----KYDRSNEWKI-ISVGEKHKD----IALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMIS 324 (413)
T ss_dssp GGCHHHHHHHHHHHHH----HCTTGGGCEE-EEEESCCCC----EEEETTEEEEEEESCCHHHHHHHHHHCCEEECCCSS
T ss_pred ccCHHHHHHHHHHHHH----hCCCCCceEE-EEEcCCchh----hhcCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCC
Confidence 4566666776664432 1343 554 556766421 234455689999997 59999999999999997
Q ss_pred -C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC
Q 036427 435 -G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARP 509 (536)
Q Consensus 435 -G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~ 509 (536)
+ |++++||||||+|||+.. .+..+ ++++ ..|.+++ |+++|+++|.++++ |++.+++ ++++.+..
T Consensus 325 E~~g~~~lEAmA~G~PVV~~~-~g~~e------~v~~~~~G~lv~~~d~~~la~ai~~ll~-~~~~~~~---~~~~~~~~ 393 (413)
T 2x0d_A 325 PHPSYPPLEMAHFGLRVITNK-YENKD------LSNWHSNIVSLEQLNPENIAETLVELCM-SFNNRDV---DKKESSNM 393 (413)
T ss_dssp SSCCSHHHHHHHTTCEEEEEC-BTTBC------GGGTBTTEEEESSCSHHHHHHHHHHHHH-HTC----------CCBSC
T ss_pred CCCCcHHHHHHhCCCcEEEeC-CCcch------hhhcCCCEEEeCCCCHHHHHHHHHHHHc-CHHHHHH---hHHHHHHh
Confidence 4 899999999999999954 33233 4544 4576664 99999999999999 8887776 56777778
Q ss_pred chHHHHHHH
Q 036427 510 DAVFRIVQD 518 (536)
Q Consensus 510 ~~~~~i~~~ 518 (536)
++|+++++.
T Consensus 394 ~~W~~~~~~ 402 (413)
T 2x0d_A 394 MFYINEFNE 402 (413)
T ss_dssp GGGCCCC--
T ss_pred CCHHHHHHH
Confidence 888877544
No 38
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.84 E-value=3.3e-19 Score=187.23 Aligned_cols=164 Identities=15% Similarity=0.065 Sum_probs=129.5
Q ss_pred CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhc
Q 036427 348 EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGAC 427 (536)
Q Consensus 348 ~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~a 427 (536)
.++++|++++|+.+.....+.+..+.+++.+ .+.++++++|.+.. + . ....+++.+.+|++ ..++|..|
T Consensus 235 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~-----~~~~~v~~~g~~~~--~-~--~~~~~~v~~~~~~~-~~~ll~~~ 303 (416)
T 1rrv_A 235 AGSPPVHIGFGSSSGRGIADAAKVAVEAIRA-----QGRRVILSRGWTEL--V-L--PDDRDDCFAIDEVN-FQALFRRV 303 (416)
T ss_dssp SSSCCEEECCTTCCSHHHHHHHHHHHHHHHH-----TTCCEEEECTTTTC--C-C--SCCCTTEEEESSCC-HHHHGGGS
T ss_pred cCCCeEEEecCCCCccChHHHHHHHHHHHHH-----CCCeEEEEeCCccc--c-c--cCCCCCEEEeccCC-hHHHhccC
Confidence 3446677777876543345566666666642 24567777787641 1 1 23456899999996 57899999
Q ss_pred CeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 428 DCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 428 Dv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
|++|+++|.+|++||+++|+|+|+.|...+|. .|+..+.+.|.|..+. ++++|.++|+++ + |++.+++|++.+
T Consensus 304 d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~-~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~-~~~~~~~~~~~~ 380 (416)
T 1rrv_A 304 AAVIHHGSAGTEHVATRAGVPQLVIPRNTDQP-YFAGRVAALGIGVAHDGPTPTFESLSAALTTV-L-APETRARAEAVA 380 (416)
T ss_dssp SEEEECCCHHHHHHHHHHTCCEEECCCSBTHH-HHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-T-SHHHHHHHHHHT
T ss_pred CEEEecCChhHHHHHHHcCCCEEEccCCCCcH-HHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-h-CHHHHHHHHHHH
Confidence 99999999999999999999999999876665 5899999999998774 789999999999 8 999999999999
Q ss_pred HHhcCCchHHHHHHHH-HHHHhhc
Q 036427 504 LKLARPDAVFRIVQDL-HELVRQR 526 (536)
Q Consensus 504 ~~~a~~~~~~~i~~~i-~~l~~~~ 526 (536)
+++....+. ++++.| ++++++.
T Consensus 381 ~~~~~~~~~-~~~~~i~e~~~~~~ 403 (416)
T 1rrv_A 381 GMVLTDGAA-AAADLVLAAVGREK 403 (416)
T ss_dssp TTCCCCHHH-HHHHHHHHHHHC--
T ss_pred HHHhhcCcH-HHHHHHHHHHhccC
Confidence 988888899 999999 8877653
No 39
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.84 E-value=9.5e-19 Score=183.19 Aligned_cols=170 Identities=18% Similarity=0.123 Sum_probs=130.8
Q ss_pred HHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh
Q 036427 338 VELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 338 ~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v 417 (536)
+++++.+. .+.++|++++|+.+. ..+.+..+.+++.+ .+.++++.+|.... ......+++.+.+|+
T Consensus 211 ~~l~~~l~--~~~~~Vlv~~Gs~~~--~~~~~~~~~~al~~-----~~~~vv~~~g~~~~-----~~~~~~~~v~~~~~~ 276 (404)
T 3h4t_A 211 AELEGFLR--AGSPPVYVGFGSGPA--PAEAARVAIEAVRA-----QGRRVVLSSGWAGL-----GRIDEGDDCLVVGEV 276 (404)
T ss_dssp HHHHHHHH--TSSCCEEECCTTSCC--CTTHHHHHHHHHHH-----TTCCEEEECTTTTC-----CCSSCCTTEEEESSC
T ss_pred HHHHHHHh--cCCCeEEEECCCCCC--cHHHHHHHHHHHHh-----CCCEEEEEeCCccc-----ccccCCCCEEEecCC
Confidence 44444432 455777888777653 22334444444432 24667777775431 122346799999999
Q ss_pred hhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCCCH
Q 036427 418 SKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGPKI 493 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~d~ 493 (536)
+. .++|..||++|+++|.+|+.||+++|+|+|++|..++|.. |+..+.+.|.|..+. +++.|.++|.++++ +
T Consensus 277 ~~-~~ll~~~d~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~-na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~--~ 352 (404)
T 3h4t_A 277 NH-QVLFGRVAAVVHHGGAGTTTAVTRAGAPQVVVPQKADQPY-YAGRVADLGVGVAHDGPTPTVESLSAALATALT--P 352 (404)
T ss_dssp CH-HHHGGGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH-HHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS--H
T ss_pred CH-HHHHhhCcEEEECCcHHHHHHHHHcCCCEEEcCCcccHHH-HHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC--H
Confidence 65 8899999999999999999999999999999998776654 899999999998874 79999999999996 7
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhc
Q 036427 494 DELKAMSQNALKLARPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 494 ~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~~ 526 (536)
+.+++|.+.+..+.. ++.+++++.|+++++..
T Consensus 353 ~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~ 384 (404)
T 3h4t_A 353 GIRARAAAVAGTIRT-DGTTVAAKLLLEAISRQ 384 (404)
T ss_dssp HHHHHHHHHHTTCCC-CHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhh-hHHHHHHHHHHHHHhhC
Confidence 889999999999888 99999999999988753
No 40
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.81 E-value=4.6e-20 Score=193.38 Aligned_cols=232 Identities=12% Similarity=0.031 Sum_probs=158.8
Q ss_pred HHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec--CC-CC--cc------cccccccCCEEEEcCHHHH
Q 036427 238 VAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT--DL-ST--CH------PTWFHKLVTRCYCPTADVA 306 (536)
Q Consensus 238 l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~--d~-~~--~~------~~~~~~~~d~vi~~S~~~~ 306 (536)
+.++++ ++|+||........+ ..+++..+ +|++...+ |. .. .. .++..+.+|.++++|+..+
T Consensus 118 l~~~~~--~~DvIh~~~~~~~~~-~~~~~~~~----~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~ 190 (406)
T 2hy7_A 118 LLDWMR--ESDVIVFESGIAVAF-IELAKRVN----PAAKLVYRASDGLSTINVASYIEREFDRVAPTLDVIALVSPAMA 190 (406)
T ss_dssp HHHHHH--HCSEEEEESSGGGGG-HHHHHHHC----TTSEEEEEESSCHHHHTCCHHHHHHHHHHGGGCSEEEESCGGGG
T ss_pred HHHHhc--CCCEEEECCchHHHH-HHHHHHhC----CCEEEEEeccchhhcccccHHHHHHHHHHHHhCCEEEEcCHHHH
Confidence 334444 699999443332211 13445554 66654433 33 10 00 1345678999999999998
Q ss_pred HHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCc
Q 036427 307 KRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIG 386 (536)
Q Consensus 307 ~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~ 386 (536)
+.+.+.+ ++.+++|+++.+.+.+.... . .++.++++++|+....|+. +..+.+. .+++
T Consensus 191 ~~~~~~~----~i~vipngvd~~~f~~~~~~-------~-~~~~~~i~~vGrl~~~Kg~---~~~l~~~-------~~~~ 248 (406)
T 2hy7_A 191 AEVVSRD----NVFHVGHGVDHNLDQLGDPS-------P-YAEGIHAVAVGSMLFDPEF---FVVASKA-------FPQV 248 (406)
T ss_dssp GGCSCST----TEEECCCCBCTTHHHHHCSC-------S-CCSSEEEEEECCTTBCHHH---HHHHHHH-------CTTE
T ss_pred HHHHhcC----CEEEEcCCcChHhcCccccc-------c-cCCCcEEEEEeccccccCH---HHHHHHh-------CCCe
Confidence 8765544 79999999987654321110 0 1223677888877665555 3444332 3667
Q ss_pred EEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEECC---C-hHHHHHHH-------HhCCcEEEec
Q 036427 387 QVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITKA---G-PGTIAEAM-------IRGLPIILND 453 (536)
Q Consensus 387 ~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~s---G-~~tllEAm-------a~GlPVI~~~ 453 (536)
++ +++|.++ .++.++.++|+|+|++ +++.++|+.||++|+|| | |++++||| +||+|||+++
T Consensus 249 ~l-~ivG~g~-----~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~ 322 (406)
T 2hy7_A 249 TF-HVIGSGM-----GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPN 322 (406)
T ss_dssp EE-EEESCSS-----CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEG
T ss_pred EE-EEEeCch-----HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEeh
Confidence 65 4557775 4555677899999998 48999999999999998 3 88999999 9999999998
Q ss_pred cCCccccCChhhHhhCCceee-cC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH--Hhh
Q 036427 454 FIAGQEAGNVPYVVENGCGKF-SK--SPKEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHEL--VRQ 525 (536)
Q Consensus 454 ~~~~~e~~na~~lv~~g~g~~-~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l--~~~ 525 (536)
. +.+...|.+ ++ |+++|+++|.++++ +++ +..++.++|+++++.+.++ .++
T Consensus 323 ~-----------v~~~~~G~l~v~~~d~~~la~ai~~ll~-~~~---------~~~~~~~sw~~~a~~~~~~~~y~~ 378 (406)
T 2hy7_A 323 A-----------VVGPYKSRFGYTPGNADSVIAAITQALE-APR---------VRYRQCLNWSDTTDRVLDPRAYPE 378 (406)
T ss_dssp G-----------GTCSCSSEEEECTTCHHHHHHHHHHHHH-CCC---------CCCSCCCBHHHHHHHHHCGGGSGG
T ss_pred h-----------cccCcceEEEeCCCCHHHHHHHHHHHHh-Ccc---------hhhhhcCCHHHHHHHHHHhhcccc
Confidence 4 333445666 53 99999999999999 776 1456789999999999998 554
No 41
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.72 E-value=1.4e-16 Score=149.35 Aligned_cols=172 Identities=21% Similarity=0.203 Sum_probs=129.6
Q ss_pred eCCCCCCCCCC--CCCc-----hHHHHHHcCCCCCCCEEEEecCCC-CCCcHHHHHHHHHHHh--hhcccCCCCcEEEEE
Q 036427 322 YGLPVRPSFVK--PVRP-----KVELRRELGMDEDLPAVLLMGGGE-GMGPIEATARALGNAL--YDENLGEPIGQVLVI 391 (536)
Q Consensus 322 ignpv~~~~~~--~~~~-----~~~~r~~lgi~~~~~~il~~gg~~-g~k~~~~~l~al~~~l--~~~~~~~~~~~~lvi 391 (536)
++|++|.+.+. +... +..++++++++++ ++++++|+.. ..|+...+++++.... . ..++++++++
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~~-~~i~~~G~~~~~~K~~~~li~a~~~l~~~~----~~~~~~l~i~ 76 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKK----EFQEMRFIII 76 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSC-EEEEEESCBCSSSSCHHHHHHHHHHHTTSG----GGGGEEEEEE
T ss_pred CCCccChhhccccccccchhhHHHHHHHHcCCCCC-CEEEEeeccccccCCHHHHHHHHHHHHhhc----cCCCeEEEEE
Confidence 57899988887 6543 6678999999755 4788888877 7788887777776543 2 2356765554
Q ss_pred ecCCH-----HHHHHHHcCCCCCCEEE-ecChh--hHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccc
Q 036427 392 CGRNK-----KLANKLLSTDWKIPVQV-KGFVS--KMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQE 459 (536)
Q Consensus 392 ~G~~~-----~l~~~l~~~~~~~~V~~-~G~v~--~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e 459 (536)
|.++ ++.+.+++.+ +|++ .|+++ ++.++|+.||++|+|+ | |++++|||++|+|||+++.++..
T Consensus 77 -G~~~~~~~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~- 151 (200)
T 2bfw_A 77 -GKGDPELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLR- 151 (200)
T ss_dssp -CCBCHHHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHH-
T ss_pred -CCCChHHHHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCCChH-
Confidence 5543 3344445544 8999 99996 9999999999999998 3 89999999999999999854322
Q ss_pred cCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC
Q 036427 460 AGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNALKLAR 508 (536)
Q Consensus 460 ~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~ 508 (536)
.+++.+.|.+++ |+++++++|.++++++++.+++|++++++++.
T Consensus 152 -----e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 152 -----DIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp -----HHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred -----HHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 244555677775 99999999999997679999999999998654
No 42
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.71 E-value=8.9e-17 Score=159.23 Aligned_cols=265 Identities=11% Similarity=0.080 Sum_probs=159.4
Q ss_pred ceEEEEeC---CCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 145 KKVLILMS---DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 145 mKIL~~~~---~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
|||+|.+. .+|.||.+||++||++|+ . ..+++.... +.. +. +.+ +.... ...
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~-~-----v~F~~~~~~---~~~---~~-------~~g--~~v~~-l~~--- 55 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS-D-----VSFACLPLE---GSL---ID-------EIP--YPVYE-LSS--- 55 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS-S-----EEEEECCCT---TCC---GG-------GCC--SCEEE-CSS---
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH-h-----CEEEEecCc---HhH---HH-------HCC--CeEEE-cCc---
Confidence 79999974 488999999999999997 2 123332211 100 00 000 00000 000
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHH-cCCCCCceEEEEecCCCCcccccccccCCEEEE
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRA-KGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYC 300 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~-~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~ 300 (536)
....++.+++++.+||+||.++.....--...++. .+ .+ +.++.|+.. ...+|.++.
T Consensus 56 -----------~d~~~~~~~l~~~~~d~lIvD~Y~~~~~~~~~lk~~~~----~~-i~~iDD~~~------~~~~Dllin 113 (282)
T 3hbm_A 56 -----------ESIYELINLIKEEKFELLIIDHYGISVDDEKLIKLETG----VK-ILSFDDEIK------PHHCDILLN 113 (282)
T ss_dssp -----------SCHHHHHHHHHHHTCSEEEEECTTCCHHHHHHHHHHHC----CE-EEEECSSCC------CCCCSEEEE
T ss_pred -----------cCHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHhcC----cE-EEEEecCCC------cccCCEEEe
Confidence 01135667788899999999987665332233333 23 33 346677641 235899998
Q ss_pred cCHHHHHHHHHhCCCCCCEEEeCC---CCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhh
Q 036427 301 PTADVAKRAMKAGLQASQIKVYGL---PVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALY 377 (536)
Q Consensus 301 ~S~~~~~~l~~~g~~~~ki~vign---pv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~ 377 (536)
.+.......-+..+|+.....+|+ |++++|+.... ...+..+.|++++|+.+..+.. ..+.+++.
T Consensus 114 ~~~~~~~~~Y~~~~p~~~~~l~G~~Y~~lR~eF~~~~~---------~~r~~~~~ILv~~GG~d~~~l~---~~vl~~L~ 181 (282)
T 3hbm_A 114 VNAYAKASDYEGLVPFKCEVRCGFSYALIREEFYQEAK---------ENRKKKYDFFICMGGTDIKNLS---LQIASELP 181 (282)
T ss_dssp CSTTCCGGGGTTTCC-CCEEEESGGGCCCCHHHHHHTT---------CCCCCCEEEEEECCSCCTTCHH---HHHHHHSC
T ss_pred CCcccchhhccccCCCCCeEeeCCcccccCHHHHHhhh---------hccccCCeEEEEECCCchhhHH---HHHHHHhh
Confidence 765432111111244444557777 67666543210 0112345666655544444432 33444443
Q ss_pred hcccCCCCcEEEEEecCCHHHHHHHHcC-CCCCCEEEecChhhHHHHHhhcCeEEECCChHHHHHHHHhCCcEEEeccCC
Q 036427 378 DENLGEPIGQVLVICGRNKKLANKLLST-DWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIAEAMIRGLPIILNDFIA 456 (536)
Q Consensus 378 ~~~~~~~~~~~lvi~G~~~~l~~~l~~~-~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~ 456 (536)
+ . .++.+++|.+....+.+++. ....++++.+++++|.++|+.||++|+++| +|+.|++++|+|+|++|...
T Consensus 182 ~----~--~~i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDlvI~~gG-~T~~E~~~~g~P~i~ip~~~ 254 (282)
T 3hbm_A 182 K----T--KIISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNKLIISAS-SLVNEALLLKANFKAICYVK 254 (282)
T ss_dssp T----T--SCEEEEECTTCTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEEEEEESS-HHHHHHHHTTCCEEEECCSG
T ss_pred c----C--CCEEEEECCCchHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCEEEECCc-HHHHHHHHcCCCEEEEeCCC
Confidence 1 1 24667788775333333221 112489999999999999999999999755 89999999999999999866
Q ss_pred ccccCChhhHhhCCceeecC
Q 036427 457 GQEAGNVPYVVENGCGKFSK 476 (536)
Q Consensus 457 ~~e~~na~~lv~~g~g~~~~ 476 (536)
+|+ .|++.+.+.|.+.++.
T Consensus 255 ~Q~-~nA~~l~~~G~~~~~~ 273 (282)
T 3hbm_A 255 NQE-STATWLAKKGYEVEYK 273 (282)
T ss_dssp GGH-HHHHHHHHTTCEEECG
T ss_pred CHH-HHHHHHHHCCCEEEcc
Confidence 555 5999999999988765
No 43
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.70 E-value=1.1e-15 Score=163.02 Aligned_cols=267 Identities=11% Similarity=0.040 Sum_probs=175.4
Q ss_pred CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCccc-----cc----c--cccCCEEEEcCHHHHHHHHHh--
Q 036427 246 QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHP-----TW----F--HKLVTRCYCPTADVAKRAMKA-- 312 (536)
Q Consensus 246 kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~-----~~----~--~~~~d~vi~~S~~~~~~l~~~-- 312 (536)
.+|+|+++.+....++..+ ++.. .++|++.+.|-...... .| + ...+|.+...+....+.+...
T Consensus 123 ~~DiV~vHdyhl~~l~~~l-r~~~--~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~ 199 (482)
T 1uqt_A 123 DDDIIWIHDYHLLPFAHEL-RKRG--VNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLS 199 (482)
T ss_dssp TTCEEEEESGGGTTHHHHH-HHTT--CCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHH-HHhC--CCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHH
Confidence 4699999986554444433 3332 24787766553211110 01 1 123577777777666655421
Q ss_pred ---C------------CCCCCEEEeCCCCCCCCCCCC----Cc--hHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHH
Q 036427 313 ---G------------LQASQIKVYGLPVRPSFVKPV----RP--KVELRRELGMDEDLPAVLLMGGGEGMGPIEATARA 371 (536)
Q Consensus 313 ---g------------~~~~ki~vignpv~~~~~~~~----~~--~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~a 371 (536)
+ -...++.++++++|.+.+.+. .. .+++|++++ ++++|+++|+....|++..++++
T Consensus 200 ~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~---~~~vil~VgRl~~~Kgi~~ll~A 276 (482)
T 1uqt_A 200 NLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELK---NVQNIFSVERLDYSKGLPERFLA 276 (482)
T ss_dssp HHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTT---TCEEEEEECCBCGGGCHHHHHHH
T ss_pred HHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhC---CCEEEEEEeCCcccCCHHHHHHH
Confidence 1 123468899999997655321 11 346777776 56788899998888999888888
Q ss_pred HHHHhhhcccCCCCcEEEEEec----CCH---HHHHHHHcC--------CC--CCCEEE-ecCh--hhHHHHHhhcCeEE
Q 036427 372 LGNALYDENLGEPIGQVLVICG----RNK---KLANKLLST--------DW--KIPVQV-KGFV--SKMEEAMGACDCII 431 (536)
Q Consensus 372 l~~~l~~~~~~~~~~~~lvi~G----~~~---~l~~~l~~~--------~~--~~~V~~-~G~v--~~l~~ll~~aDv~V 431 (536)
+...+.+......++.++++++ +++ ++.+.++++ +. -.+|++ .|++ +++..+|+.||++|
T Consensus 277 ~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v 356 (482)
T 1uqt_A 277 YEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGL 356 (482)
T ss_dssp HHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEE
T ss_pred HHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEE
Confidence 8766542100011244444432 232 233333321 11 124665 5665 58999999999999
Q ss_pred ECC---C-hHHHHHHHHhCC-----cEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHH
Q 036427 432 TKA---G-PGTIAEAMIRGL-----PIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMS 500 (536)
Q Consensus 432 ~~s---G-~~tllEAma~Gl-----PVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~ 500 (536)
+|| | +++++|||+||+ |+|+++..+..+. + + .|.+++ |+++++++|.++++++++.+++++
T Consensus 357 ~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~-----l-~--~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~ 428 (482)
T 1uqt_A 357 VTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE-----L-T--SALIVNPYDRDEVAAALDRALTMSLAERISRH 428 (482)
T ss_dssp ECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT-----C-T--TSEEECTTCHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred ECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH-----h-C--CeEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Confidence 998 5 899999999997 8999886543332 3 2 456665 999999999999985578899999
Q ss_pred HHHHHhcCCchHHHHHHHHHHHHhhc
Q 036427 501 QNALKLARPDAVFRIVQDLHELVRQR 526 (536)
Q Consensus 501 ~~a~~~a~~~~~~~i~~~i~~l~~~~ 526 (536)
+++++.+..++++++++.+++.+++.
T Consensus 429 ~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 429 AEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 99999888899999999999888763
No 44
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.64 E-value=8.1e-15 Score=155.70 Aligned_cols=154 Identities=18% Similarity=0.158 Sum_probs=111.6
Q ss_pred HHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecCh
Q 036427 340 LRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 340 ~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v 417 (536)
..+.+...+++++|++++|+.+... .+.+..+++.+.+ .+.++++++|... .+.+.+.+ ....++.+.+|+
T Consensus 261 ~~~wl~~~~~~~vv~vs~GS~~~~~-~~~~~~~~~~l~~-----~~~~~lw~~~~~~~~~l~~~~~~-~~~~~~~v~~w~ 333 (456)
T 2c1x_A 261 CLQWLKERKPTSVVYISFGTVTTPP-PAEVVALSEALEA-----SRVPFIWSLRDKARVHLPEGFLE-KTRGYGMVVPWA 333 (456)
T ss_dssp HHHHHHTSCTTCEEEEECCSSCCCC-HHHHHHHHHHHHH-----HTCCEEEECCGGGGGGSCTTHHH-HHTTTEEEESCC
T ss_pred HHHHHhcCCCcceEEEecCccccCC-HHHHHHHHHHHHh-----cCCeEEEEECCcchhhCCHHHHh-hcCCceEEecCC
Confidence 4455544556789999999877544 3445556555542 3456788887643 11111110 013589999999
Q ss_pred hhHHHHHh--hcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-CceeecC----CHHHHHHHHHHHhC
Q 036427 418 SKMEEAMG--ACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCGKFSK----SPKEIANMVSQWFG 490 (536)
Q Consensus 418 ~~l~~ll~--~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g~~~~----d~~~La~~I~~ll~ 490 (536)
++. ++|. .+|++|+++|.+|++||+++|+|+|+.|...+|.. |+..+++. |.|..+. +.+++.++|+++++
T Consensus 334 pq~-~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~-Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~ 411 (456)
T 2c1x_A 334 PQA-EVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRL-NGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILS 411 (456)
T ss_dssp CHH-HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH-HHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHH
T ss_pred CHH-HHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHH-HHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHC
Confidence 875 6777 78999999999999999999999999999887765 99999999 9999874 78999999999998
Q ss_pred CCHHHHHHHHHHHH
Q 036427 491 PKIDELKAMSQNAL 504 (536)
Q Consensus 491 ~d~~~~~~m~~~a~ 504 (536)
+++ .++|+++++
T Consensus 412 -~~~-~~~~r~~a~ 423 (456)
T 2c1x_A 412 -QEK-GKKLRENLR 423 (456)
T ss_dssp -SHH-HHHHHHHHH
T ss_pred -CCc-HHHHHHHHH
Confidence 874 334444433
No 45
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.63 E-value=8.2e-15 Score=149.31 Aligned_cols=227 Identities=14% Similarity=0.117 Sum_probs=153.4
Q ss_pred HHHHh-hCCCEEEEcCcccchH--HHHHHHHcCCCCCceEEEEecCCCCcc----------cccccccCCEEEEcCHHHH
Q 036427 240 KGLMK-YQPDIIISVHPLMQHV--PLRILRAKGLLKKIVFTTVITDLSTCH----------PTWFHKLVTRCYCPTADVA 306 (536)
Q Consensus 240 ~~l~~-~kPDvVi~~~~~~~~i--~~~~~~~~g~~~~ip~v~~~~d~~~~~----------~~~~~~~~d~vi~~S~~~~ 306 (536)
.++.. .++|+||...|..... ...+.++.... ++|++..+||+.... .+|+++.+|.++++|+.++
T Consensus 67 ~~~~~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~-~~k~i~~ihDl~pl~~~~~~~~~~~E~~~y~~aD~Ii~~S~~~~ 145 (339)
T 3rhz_A 67 GIVAGLRHGDVVIFQTPTWNTTEFDEKLMNKLKLY-DIKIVLFIHDVVPLMFSGNFYLMDRTIAYYNKADVVVAPSQKMI 145 (339)
T ss_dssp HHTTTCCTTCEEEEEECCSSCHHHHHHHHHHHTTS-SCEEEEEESCCHHHHCGGGGGGHHHHHHHHTTCSEEEESCHHHH
T ss_pred HHHhcCCCCCEEEEeCCCcchhhHHHHHHHHHHhc-CCEEEEEecccHHhhCccchhhHHHHHHHHHHCCEEEECCHHHH
Confidence 34444 3589999988765322 22233443222 489999999986411 1467899999999999999
Q ss_pred HHHHHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCc
Q 036427 307 KRAMKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIG 386 (536)
Q Consensus 307 ~~l~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~ 386 (536)
+.+.++|++..++.++++.-... . . + ...+.+.+.++++|+ .+.. +.+.+. .+++
T Consensus 146 ~~l~~~G~~~~ki~~~~~~~~~~--~-~-~-------~~~~~~~~~i~yaG~-l~k~----------~~L~~l---~~~~ 200 (339)
T 3rhz_A 146 DKLRDFGMNVSKTVVQGMWDHPT--Q-A-P-------MFPAGLKREIHFPGN-PERF----------SFVKEW---KYDI 200 (339)
T ss_dssp HHHHHTTCCCSEEEECCSCCCCC--C-C-C-------CCCCEEEEEEEECSC-TTTC----------GGGGGC---CCSS
T ss_pred HHHHHcCCCcCceeecCCCCccC--c-c-c-------ccccCCCcEEEEeCC-cchh----------hHHHhC---CCCC
Confidence 99999999877887665431111 0 0 0 011223455655555 4421 111111 2567
Q ss_pred EEEEEecCCHHHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEEC-CC----------hHHHHHHHHhCCcEEEec
Q 036427 387 QVLVICGRNKKLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITK-AG----------PGTIAEAMIRGLPIILND 453 (536)
Q Consensus 387 ~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~-sG----------~~tllEAma~GlPVI~~~ 453 (536)
++ +++|.+++. ... ||+|.|++ +++..+|+.+|+.++. ++ |.++.||||+|+|||+.+
T Consensus 201 ~f-~ivG~G~~~-------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~ 271 (339)
T 3rhz_A 201 PL-KVYTWQNVE-------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE 271 (339)
T ss_dssp CE-EEEESCCCC-------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET
T ss_pred eE-EEEeCCccc-------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc
Confidence 65 556777632 234 99999998 4899999888876653 32 789999999999999987
Q ss_pred cCCccccCChhhHhhCCceeecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC
Q 036427 454 FIAGQEAGNVPYVVENGCGKFSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARP 509 (536)
Q Consensus 454 ~~~~~e~~na~~lv~~g~g~~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~ 509 (536)
... .++.+.+.++|+.+++.+++.++|..+ +++.+++|++++++.+..
T Consensus 272 ~~~-----~~~~v~~~~~G~~~~~~~e~~~~i~~l---~~~~~~~m~~na~~~a~~ 319 (339)
T 3rhz_A 272 GIA-----NQELIENNGLGWIVKDVEEAIMKVKNV---NEDEYIELVKNVRSFNPI 319 (339)
T ss_dssp TCT-----TTHHHHHHTCEEEESSHHHHHHHHHHC---CHHHHHHHHHHHHHHTHH
T ss_pred Chh-----HHHHHHhCCeEEEeCCHHHHHHHHHHh---CHHHHHHHHHHHHHHHHH
Confidence 433 445577889999999999999999875 467799999999887544
No 46
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.63 E-value=1.7e-15 Score=137.51 Aligned_cols=152 Identities=16% Similarity=0.177 Sum_probs=109.7
Q ss_pred CEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCCCCCEEEecCh--hhHHHHHh
Q 036427 351 PAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDWKIPVQVKGFV--SKMEEAMG 425 (536)
Q Consensus 351 ~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~ 425 (536)
++++++|+....|+...+++++.. +. ..+++++ +++|.++ ++.+.+++.+. ++.+ |++ +++.++|+
T Consensus 3 ~~i~~~G~~~~~Kg~~~li~a~~~-l~----~~~~~~l-~i~G~g~~~~~~~~~~~~~~~--~v~~-g~~~~~~~~~~~~ 73 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSVLIKAVAL-SK----YKQDIVL-LLKGKGPDEKKIKLLAQKLGV--KAEF-GFVNSNELLEILK 73 (166)
T ss_dssp EEEEEESCCSTTTTHHHHHHHHHT-CT----TGGGEEE-EEECCSTTHHHHHHHHHHHTC--EEEC-CCCCHHHHHHHHT
T ss_pred eEEEEEeccchhcCHHHHHHHHHH-hc----cCCCeEE-EEEeCCccHHHHHHHHHHcCC--eEEE-eecCHHHHHHHHH
Confidence 567788887777888777777754 32 2356665 5557664 44555555554 7888 997 58999999
Q ss_pred hcCeEEECC---C-hHHHHHHHHhCC-cEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHhCCCHHHHHHH
Q 036427 426 ACDCIITKA---G-PGTIAEAMIRGL-PIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWFGPKIDELKAM 499 (536)
Q Consensus 426 ~aDv~V~~s---G-~~tllEAma~Gl-PVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~~d~~~~~~m 499 (536)
.||++|+|| | |++++|||++|+ |||+++..+... .++.++...+. .|+++++++|.++++ +++.+++|
T Consensus 74 ~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~i~~l~~-~~~~~~~~ 147 (166)
T 3qhp_A 74 TCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATR-----QFALDERSLFEPNNAKDLSAKIDWWLE-NKLERERM 147 (166)
T ss_dssp TCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGG-----GGCSSGGGEECTTCHHHHHHHHHHHHH-CHHHHHHH
T ss_pred hCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchh-----hhccCCceEEcCCCHHHHHHHHHHHHh-CHHHHHHH
Confidence 999999998 4 899999999998 999955333222 24444433333 499999999999999 99999999
Q ss_pred HHHHHHhcCCchHHHHHH
Q 036427 500 SQNALKLARPDAVFRIVQ 517 (536)
Q Consensus 500 ~~~a~~~a~~~~~~~i~~ 517 (536)
+++++++++.++++++++
T Consensus 148 ~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 148 QNEYAKSALNYTLENSVI 165 (166)
T ss_dssp HHHHHHHHHHHC------
T ss_pred HHHHHHHHHHCChhhhhc
Confidence 999999887788887765
No 47
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=99.62 E-value=4.9e-14 Score=150.02 Aligned_cols=355 Identities=14% Similarity=0.055 Sum_probs=200.9
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccce--eecCCCcc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKM--TYYGTAPR 220 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~--~~~~~~~~ 220 (536)
++++|+++.... .||..+.+.||+.|.+++| |++|+++......... +...-.......+.+.. +.....+.
T Consensus 8 ~~~~vv~~p~p~-~GHi~P~l~La~~L~~r~p-G~~Vt~v~t~~~~~~~----~~~~~~~~~~~~~~i~~~~lp~~~~~~ 81 (463)
T 2acv_A 8 KNSELIFIPAPG-IGHLASALEFAKLLTNHDK-NLYITVFCIKFPGMPF----ADSYIKSVLASQPQIQLIDLPEVEPPP 81 (463)
T ss_dssp HCEEEEEECCSS-TTTHHHHHHHHHHHHHTCT-TEEEEEEECCCTTCCC----CHHHHHHHHCSCTTEEEEECCCCCCCC
T ss_pred CCCEEEEEcCcc-cchHHHHHHHHHHHHhcCC-CcEEEEEEcCCcchhh----hhhhhhhcccCCCCceEEECCCCCCCc
Confidence 347899998877 7999999999999998743 6888766432211000 00000000000000000 00000000
Q ss_pred c---c-cchhhhhhhHHHHHHHHHHHHh---hCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCC----------
Q 036427 221 V---I-HQSNFAATSTFIAREVAKGLMK---YQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDL---------- 283 (536)
Q Consensus 221 ~---~-~~~~~~~~~~~~~~~l~~~l~~---~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~---------- 283 (536)
. . ....+..........+.+++++ .+||+||++...... ..++++.| ||.+.+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~--~~vA~~lg----iP~v~~~~~~~~~~~~~~~~ 155 (463)
T 2acv_A 82 QELLKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSM--IDVGNEFG----IPSYLFLTSNVGFLSLMLSL 155 (463)
T ss_dssp GGGGGSHHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGG--HHHHHHTT----CCEEEEESSCHHHHHHHHHG
T ss_pred ccccCCccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhH--HHHHHHcC----CCEEEEeCchHHHHHHHHHH
Confidence 0 0 0000111112233467777877 689999988743322 34567776 7866543210
Q ss_pred ------------C-----Cccccc------------c----------------cccCCEEEEcCHHHHH-HHH----HhC
Q 036427 284 ------------S-----TCHPTW------------F----------------HKLVTRCYCPTADVAK-RAM----KAG 313 (536)
Q Consensus 284 ------------~-----~~~~~~------------~----------------~~~~d~vi~~S~~~~~-~l~----~~g 313 (536)
. ...+.+ + .+.++.+++.+-...+ ... ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~ 235 (463)
T 2acv_A 156 KNRQIEEVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHD 235 (463)
T ss_dssp GGSCTTCCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHC
T ss_pred HhhcccCCCCCccccCceeECCCCCCCCChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcc
Confidence 0 000000 0 1345566654433333 221 111
Q ss_pred CCCCCEEEeCCCCCCCCCCC--C---CchHHHHHHcCCCCCCCEEEEecCCCC-CCcHHHHHHHHHHHhhhcccCCCCcE
Q 036427 314 LQASQIKVYGLPVRPSFVKP--V---RPKVELRRELGMDEDLPAVLLMGGGEG-MGPIEATARALGNALYDENLGEPIGQ 387 (536)
Q Consensus 314 ~~~~ki~vignpv~~~~~~~--~---~~~~~~r~~lgi~~~~~~il~~gg~~g-~k~~~~~l~al~~~l~~~~~~~~~~~ 387 (536)
.|..++..+|. +....... . ....+..+.+.-.+++++|++++|+.+ ... .+.+..+++.+.+ .+.+
T Consensus 236 ~p~~~v~~vGp-l~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~-~~~~~~~~~~l~~-----~~~~ 308 (463)
T 2acv_A 236 EKIPPIYAVGP-LLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFG-PSQIREIALGLKH-----SGVR 308 (463)
T ss_dssp TTSCCEEECCC-CCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCC-HHHHHHHHHHHHH-----HTCE
T ss_pred ccCCcEEEeCC-CcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCC-HHHHHHHHHHHHh-----CCCc
Confidence 11346888984 43221101 1 112345555655556789999999887 433 2345555555542 3467
Q ss_pred EEEEecCC-H----HHHHHHHcCCCCCCEEEecChhhHHHHHh--hcCeEEECCChHHHHHHHHhCCcEEEeccCCcccc
Q 036427 388 VLVICGRN-K----KLANKLLSTDWKIPVQVKGFVSKMEEAMG--ACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEA 460 (536)
Q Consensus 388 ~lvi~G~~-~----~l~~~l~~~~~~~~V~~~G~v~~l~~ll~--~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~ 460 (536)
+++++|.+ . ...+.... ..++.+.+|++++ ++|. .+|++|+++|.+|++||+++|+|+|+.|...+|..
T Consensus 309 ~l~~~~~~~~~l~~~~~~~~~~---~~~~~v~~w~pq~-~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~ 384 (463)
T 2acv_A 309 FLWSNSAEKKVFPEGFLEWMEL---EGKGMICGWAPQV-EVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQL 384 (463)
T ss_dssp EEEECCCCGGGSCTTHHHHHHH---HCSEEEESSCCHH-HHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHH
T ss_pred EEEEECCCcccCChhHHHhhcc---CCCEEEEccCCHH-HHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHH
Confidence 88888864 1 22222200 2478899999876 5665 78999999999999999999999999999887764
Q ss_pred CChhhH-hhCCceeec-C---------CHHHHHHHHHHHhCCCHHHHHHHHHHHH---HhcCC-chHHHHHHHHHH
Q 036427 461 GNVPYV-VENGCGKFS-K---------SPKEIANMVSQWFGPKIDELKAMSQNAL---KLARP-DAVFRIVQDLHE 521 (536)
Q Consensus 461 ~na~~l-v~~g~g~~~-~---------d~~~La~~I~~ll~~d~~~~~~m~~~a~---~~a~~-~~~~~i~~~i~~ 521 (536)
|+..+ .+.|.|..+ . +.+++.++|+++++.++++++++.+.+. +...+ .++.+-.+.+.+
T Consensus 385 -Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~ 459 (463)
T 2acv_A 385 -NAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLID 459 (463)
T ss_dssp -HHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHH
T ss_pred -HHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 99985 688999877 1 6799999999999723566655554443 33334 334444444443
No 48
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.62 E-value=5.8e-14 Score=151.73 Aligned_cols=102 Identities=12% Similarity=0.114 Sum_probs=78.7
Q ss_pred hHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-------CceeecC-----CH----
Q 036427 419 KMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-------GCGKFSK-----SP---- 478 (536)
Q Consensus 419 ~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-------g~g~~~~-----d~---- 478 (536)
++.++|+.||++|+|| | |.+++|||+||+|||+++.++..+. +.+. +.|+++. ++
T Consensus 511 d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~-----V~dg~~~~~~~~tG~lV~~rd~~d~ee~a 585 (725)
T 3nb0_A 511 DYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSY-----MEDLIETNQAKDYGIYIVDRRFKAPDESV 585 (725)
T ss_dssp CHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHH-----HHTTSCHHHHHHTTEEEECCSSSCHHHHH
T ss_pred HHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhh-----hhccccccCCCCceEEEeCCCCCCHHHHH
Confidence 5899999999999999 3 8999999999999999997654331 2221 2455551 44
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 036427 479 KEIANMVSQWFGPKIDELKAMSQNALKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 479 ~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
++|+++|..+++.+++.++.|++++++.++.+.|+++++.+.++.++
T Consensus 586 eaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~ 632 (725)
T 3nb0_A 586 EQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQL 632 (725)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 45555565555547888999999999999999999999998876654
No 49
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.61 E-value=9.7e-14 Score=147.03 Aligned_cols=262 Identities=12% Similarity=0.050 Sum_probs=180.0
Q ss_pred CCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEec-CCCC-----cccc-c------ccccCCEEEEcCHHHHHHHHHh
Q 036427 246 QPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVIT-DLST-----CHPT-W------FHKLVTRCYCPTADVAKRAMKA 312 (536)
Q Consensus 246 kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~-d~~~-----~~~~-~------~~~~~d~vi~~S~~~~~~l~~~ 312 (536)
.-|+|.+|.+-+..+|..+ ++.+. +.+...+.| .+.. ..+. | ..-.+|.+...++...+.+...
T Consensus 149 ~~D~VwVhDYhL~llp~~l-R~~~~--~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~ 225 (496)
T 3t5t_A 149 ADPVYLVHDYQLVGVPALL-REQRP--DAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLES 225 (496)
T ss_dssp SSCEEEEESGGGTTHHHHH-HHHCT--TSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHH
T ss_pred CCCEEEEeCccHhHHHHHH-HhhCC--CCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHH
Confidence 3579999887776666554 43332 355555544 3321 2221 1 1246899999999888776542
Q ss_pred ------CCCC-------------CCEEEeCCCCCCCCCCCCCc--hHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHH
Q 036427 313 ------GLQA-------------SQIKVYGLPVRPSFVKPVRP--KVELRRELGMDEDLPAVLLMGGGEGMGPIEATARA 371 (536)
Q Consensus 313 ------g~~~-------------~ki~vignpv~~~~~~~~~~--~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~a 371 (536)
|.+. .++.++++++|+..+.+... +.+++++++ ++++|+.+|+....|++...+++
T Consensus 226 ~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~---~~~lIl~VgRLd~~KGi~~lL~A 302 (496)
T 3t5t_A 226 VADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWAD---GHRLVVHSGRTDPIKNAERAVRA 302 (496)
T ss_dssp HHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHT---TSEEEEEEEESSGGGCHHHHHHH
T ss_pred HHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhC---CceEEEEcccCccccCHHHHHHH
Confidence 3221 25778999999887754321 356777886 57889999998888999999999
Q ss_pred HHHHhhhcccCCCC---cEEEEEe----cCCH---HHHHHHHcC----C---CCCCEEEecCh--hhHHHHHhhcCeEEE
Q 036427 372 LGNALYDENLGEPI---GQVLVIC----GRNK---KLANKLLST----D---WKIPVQVKGFV--SKMEEAMGACDCIIT 432 (536)
Q Consensus 372 l~~~l~~~~~~~~~---~~~lvi~----G~~~---~l~~~l~~~----~---~~~~V~~~G~v--~~l~~ll~~aDv~V~ 432 (536)
+ +.+.+ .|+ +.++.++ |.++ +++++++++ + -..+|+++|.+ +++..+|+.||++|+
T Consensus 303 f-~ll~~----~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv 377 (496)
T 3t5t_A 303 F-VLAAR----GGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIF 377 (496)
T ss_dssp H-HHHHH----TSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEE
T ss_pred H-HHHHh----CcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEE
Confidence 8 66652 344 3344443 2333 233333332 1 01179999986 589999999999999
Q ss_pred CC---C-hHHHHHHHHhC---CcEEEeccCCccccCChhhHhhCCceeecC--CHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 036427 433 KA---G-PGTIAEAMIRG---LPIILNDFIAGQEAGNVPYVVENGCGKFSK--SPKEIANMVSQWFGPKIDELKAMSQNA 503 (536)
Q Consensus 433 ~s---G-~~tllEAma~G---lPVI~~~~~~~~e~~na~~lv~~g~g~~~~--d~~~La~~I~~ll~~d~~~~~~m~~~a 503 (536)
+| | +++++|||+|| .|+|++...+. +..+.+ .|.+++ |+++++++|.++|+++++.++.+.++.
T Consensus 378 ~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa-----~~~l~~--~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~ 450 (496)
T 3t5t_A 378 NSTVDGQNLSTFEAPLVNERDADVILSETCGA-----AEVLGE--YCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARR 450 (496)
T ss_dssp CCSSBSCCSHHHHHHHHCSSCCEEEEETTBTT-----HHHHGG--GSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred CcccccCChhHHHHHHhCCCCCCEEEeCCCCC-----HHHhCC--CEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 98 5 89999999997 89999875443 233422 356665 999999999999996678899999999
Q ss_pred HHhcCCchHHHHHHHHHHHHhh
Q 036427 504 LKLARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 504 ~~~a~~~~~~~i~~~i~~l~~~ 525 (536)
++....+.+.+.++.+++.++.
T Consensus 451 ~~~V~~~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 451 RDAARPWTLEAWVQAQLDGLAA 472 (496)
T ss_dssp HHHHTTCBHHHHHHHHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHHHhh
Confidence 9999999988888887766643
No 50
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.59 E-value=2.7e-14 Score=130.56 Aligned_cols=152 Identities=16% Similarity=0.194 Sum_probs=113.2
Q ss_pred HHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecCh
Q 036427 338 VELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFV 417 (536)
Q Consensus 338 ~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v 417 (536)
+++.+.+.-.++.+.+++++|+.+.....+.+..+++++. ..+.++++++|.... ..+..+|++.+|+
T Consensus 9 ~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~-----~~~~~~~~~~g~~~~-------~~~~~~v~~~~~~ 76 (170)
T 2o6l_A 9 KEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALA-----QIPQKVLWRFDGNKP-------DTLGLNTRLYKWI 76 (170)
T ss_dssp HHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHT-----TSSSEEEEECCSSCC-------TTCCTTEEEESSC
T ss_pred HHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHH-----hCCCeEEEEECCcCc-------ccCCCcEEEecCC
Confidence 4455554333456778888887764334556666666664 224677777764421 1245689999999
Q ss_pred hhHHHHH--hhcCeEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC----CHHHHHHHHHHHhCC
Q 036427 418 SKMEEAM--GACDCIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK----SPKEIANMVSQWFGP 491 (536)
Q Consensus 418 ~~l~~ll--~~aDv~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~----d~~~La~~I~~ll~~ 491 (536)
++ .+++ ..||++|+++|++|++|||++|+|+|++|...+| ..|+..+.+.|.|..++ ++++|+++|.++++
T Consensus 77 ~~-~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q-~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~- 153 (170)
T 2o6l_A 77 PQ-NDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQ-PDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVIN- 153 (170)
T ss_dssp CH-HHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH-HHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHH-
T ss_pred CH-HHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhH-HHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHc-
Confidence 76 6777 8999999999999999999999999999987666 45899999999999886 88999999999999
Q ss_pred CHHHHHHHHHHHH
Q 036427 492 KIDELKAMSQNAL 504 (536)
Q Consensus 492 d~~~~~~m~~~a~ 504 (536)
++++++++.+.+.
T Consensus 154 ~~~~~~~a~~~~~ 166 (170)
T 2o6l_A 154 DPSYKENVMKLSR 166 (170)
T ss_dssp CHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHH
Confidence 8886666655443
No 51
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.56 E-value=1.3e-14 Score=133.81 Aligned_cols=145 Identities=17% Similarity=0.051 Sum_probs=108.5
Q ss_pred CCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHH--cCCCCCCEEEecChh-
Q 036427 345 GMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLL--STDWKIPVQVKGFVS- 418 (536)
Q Consensus 345 gi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~--~~~~~~~V~~~G~v~- 418 (536)
.++.++++++++|+....|+...+++++... +++++++ +|.++ ++.+.++ +.++.++|++.|+++
T Consensus 18 ~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l--------~~~~l~i-~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~ 88 (177)
T 2f9f_A 18 KFKCYGDFWLSVNRIYPEKRIELQLEVFKKL--------QDEKLYI-VGWFSKGDHAERYARKIMKIAPDNVKFLGSVSE 88 (177)
T ss_dssp CCCCCCSCEEEECCSSGGGTHHHHHHHHHHC--------TTSCEEE-EBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCH
T ss_pred ccCCCCCEEEEEeccccccCHHHHHHHHHhC--------CCcEEEE-EecCccHHHHHHHHHhhhcccCCcEEEeCCCCH
Confidence 4567778899998887777777776666532 4566544 45543 4556666 556778999999995
Q ss_pred -hHHHHHhhcCeEEECC---C-hHHHHHHHHhCCcEEEeccCCccccCChhhHhh-CCceeec-CCHHHHHHHHHHHhCC
Q 036427 419 -KMEEAMGACDCIITKA---G-PGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVE-NGCGKFS-KSPKEIANMVSQWFGP 491 (536)
Q Consensus 419 -~l~~ll~~aDv~V~~s---G-~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~-~g~g~~~-~d~~~La~~I~~ll~~ 491 (536)
++.++|+.||++|+++ | +++++|||++|+|||+++.++ ...+++ ...|.++ .|+++++++|.++++
T Consensus 89 ~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~------~~e~i~~~~~g~~~~~d~~~l~~~i~~l~~- 161 (177)
T 2f9f_A 89 EELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGG------FKETVINEKTGYLVNADVNEIIDAMKKVSK- 161 (177)
T ss_dssp HHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHH------HHHHCCBTTTEEEECSCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCC------HHHHhcCCCccEEeCCCHHHHHHHHHHHHh-
Confidence 5999999999999987 3 899999999999999998533 223444 4466665 599999999999998
Q ss_pred CHHH-HHHHHHHHHH
Q 036427 492 KIDE-LKAMSQNALK 505 (536)
Q Consensus 492 d~~~-~~~m~~~a~~ 505 (536)
+++. ++++++++++
T Consensus 162 ~~~~~~~~~~~~a~~ 176 (177)
T 2f9f_A 162 NPDKFKKDCFRRAKE 176 (177)
T ss_dssp CTTTTHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhc
Confidence 7765 6666666654
No 52
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=99.54 E-value=4.3e-12 Score=135.71 Aligned_cols=155 Identities=15% Similarity=0.156 Sum_probs=110.2
Q ss_pred HHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH----H--HHHHHHcCCCCCCEEE
Q 036427 340 LRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK----K--LANKLLSTDWKIPVQV 413 (536)
Q Consensus 340 ~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~----~--l~~~l~~~~~~~~V~~ 413 (536)
..+.+.-.+++++|++++|+.+...... +..+++.+. ..+.++++++|... . +.+.+.+ ....++.+
T Consensus 285 ~~~wld~~~~~~vv~vs~GS~~~~~~~~-~~~~~~~l~-----~~~~~~l~~~~~~~~~~~~~~l~~~~~~-~~~~~~~v 357 (482)
T 2pq6_A 285 CLDWLESKEPGSVVYVNFGSTTVMTPEQ-LLEFAWGLA-----NCKKSFLWIIRPDLVIGGSVIFSSEFTN-EIADRGLI 357 (482)
T ss_dssp HHHHHTTSCTTCEEEEECCSSSCCCHHH-HHHHHHHHH-----HTTCEEEEECCGGGSTTTGGGSCHHHHH-HHTTTEEE
T ss_pred HHHHHhcCCCCceEEEecCCcccCCHHH-HHHHHHHHH-----hcCCcEEEEEcCCccccccccCcHhHHH-hcCCCEEE
Confidence 3444433345678999999877544444 555666664 24467888877431 0 1111111 02358999
Q ss_pred ecChhhHHHHHhhcC--eEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHh-hCCceeecC---CHHHHHHHHHH
Q 036427 414 KGFVSKMEEAMGACD--CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVV-ENGCGKFSK---SPKEIANMVSQ 487 (536)
Q Consensus 414 ~G~v~~l~~ll~~aD--v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv-~~g~g~~~~---d~~~La~~I~~ 487 (536)
.+|++++ ++|++++ ++|+++|.+|++||+++|+|+|+.|...+|.. |+..++ +.|.|..+. +.++|.++|++
T Consensus 358 ~~~~pq~-~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~-na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ 435 (482)
T 2pq6_A 358 ASWCPQD-KVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPT-DCRFICNEWEIGMEIDTNVKREELAKLINE 435 (482)
T ss_dssp ESCCCHH-HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH-HHHHHHHTSCCEEECCSSCCHHHHHHHHHH
T ss_pred EeecCHH-HHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchHH-HHHHHHHHhCEEEEECCCCCHHHHHHHHHH
Confidence 9999876 5886655 59999999999999999999999999887765 999887 689999885 89999999999
Q ss_pred HhCCCHHHHHHHHHHHHH
Q 036427 488 WFGPKIDELKAMSQNALK 505 (536)
Q Consensus 488 ll~~d~~~~~~m~~~a~~ 505 (536)
+++ +++ .++|+++|++
T Consensus 436 ll~-~~~-~~~~r~~a~~ 451 (482)
T 2pq6_A 436 VIA-GDK-GKKMKQKAME 451 (482)
T ss_dssp HHT-SHH-HHHHHHHHHH
T ss_pred HHc-CCc-HHHHHHHHHH
Confidence 999 885 2444444443
No 53
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=99.50 E-value=9.8e-12 Score=131.31 Aligned_cols=166 Identities=16% Similarity=0.119 Sum_probs=117.3
Q ss_pred CEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHH
Q 036427 318 QIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKK 397 (536)
Q Consensus 318 ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~ 397 (536)
++..+|.-..........+.++..+.+.-.+++++|++.+|+.+.... +.+..++..+.+ .+.+++++.|....
T Consensus 241 ~v~~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~-~~~~el~~~l~~-----~~~~flw~~~~~~~ 314 (454)
T 3hbf_A 241 LLLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPP-HELTALAESLEE-----CGFPFIWSFRGDPK 314 (454)
T ss_dssp CEEECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCH-HHHHHHHHHHHH-----HCCCEEEECCSCHH
T ss_pred CEEEECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcCCH-HHHHHHHHHHHh-----CCCeEEEEeCCcch
Confidence 577777532111001111123455566555667899999998775443 335666666652 34678888887641
Q ss_pred --HHHHHHcCCCCCCEEEecChhhHHHHHhhcC--eEEECCChHHHHHHHHhCCcEEEeccCCccccCChhhHhhC-Cce
Q 036427 398 --LANKLLSTDWKIPVQVKGFVSKMEEAMGACD--CIITKAGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVEN-GCG 472 (536)
Q Consensus 398 --l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aD--v~V~~sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~-g~g 472 (536)
+.+.+.+ ....++.+.+|+++ .++|.+++ ++|+++|.++++||+++|+|+|+.|..++|.. |+..+++. |.|
T Consensus 315 ~~lp~~~~~-~~~~~~~vv~w~Pq-~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~-Na~~v~~~~g~G 391 (454)
T 3hbf_A 315 EKLPKGFLE-RTKTKGKIVAWAPQ-VEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGL-NTILTESVLEIG 391 (454)
T ss_dssp HHSCTTHHH-HTTTTEEEESSCCH-HHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH-HHHHHHTTSCSE
T ss_pred hcCCHhHHh-hcCCceEEEeeCCH-HHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHH-HHHHHHHhhCee
Confidence 1111111 12458999999987 58999999 89999999999999999999999999887665 89989985 999
Q ss_pred eecC----CHHHHHHHHHHHhCCCH
Q 036427 473 KFSK----SPKEIANMVSQWFGPKI 493 (536)
Q Consensus 473 ~~~~----d~~~La~~I~~ll~~d~ 493 (536)
..+. +.+++.++|+++++ ++
T Consensus 392 v~l~~~~~~~~~l~~av~~ll~-~~ 415 (454)
T 3hbf_A 392 VGVDNGVLTKESIKKALELTMS-SE 415 (454)
T ss_dssp EECGGGSCCHHHHHHHHHHHHS-SH
T ss_pred EEecCCCCCHHHHHHHHHHHHC-CC
Confidence 8774 78999999999998 75
No 54
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.46 E-value=9.1e-12 Score=133.01 Aligned_cols=166 Identities=14% Similarity=0.109 Sum_probs=108.7
Q ss_pred CCEEEeCCCCCCCCCCC-CCchHHHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCC
Q 036427 317 SQIKVYGLPVRPSFVKP-VRPKVELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRN 395 (536)
Q Consensus 317 ~ki~vignpv~~~~~~~-~~~~~~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~ 395 (536)
.++..+|.......... ....+++.+.+.-.+++++|++.+|+...... +.+..+++.+. ..+.+++++++..
T Consensus 234 ~~v~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~-~~~~~~~~al~-----~~~~~~lw~~~~~ 307 (480)
T 2vch_A 234 PPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTC-EQLNELALGLA-----DSEQRFLWVIRSP 307 (480)
T ss_dssp CCEEECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCH-HHHHHHHHHHH-----HTTCEEEEEECCC
T ss_pred CcEEEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCH-HHHHHHHHHHH-----hcCCcEEEEECCc
Confidence 36888886543321100 11122344444333456888888888765443 44566666665 2456787777653
Q ss_pred H--------------HH----HHHHHcCCCCCCEEEecChhhHHHHHhhcC--eEEECCChHHHHHHHHhCCcEEEeccC
Q 036427 396 K--------------KL----ANKLLSTDWKIPVQVKGFVSKMEEAMGACD--CIITKAGPGTIAEAMIRGLPIILNDFI 455 (536)
Q Consensus 396 ~--------------~l----~~~l~~~~~~~~V~~~G~v~~l~~ll~~aD--v~V~~sG~~tllEAma~GlPVI~~~~~ 455 (536)
. ++ .+.+.+......+.+.+|+++. ++|++++ ++|+++|.+|++||+++|+|+|+.|..
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~-~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~ 386 (480)
T 2vch_A 308 SGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQA-QVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLY 386 (480)
T ss_dssp CSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHH-HHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred cccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHH-HHhCCCCcCeEEecccchhHHHHHHcCCCEEecccc
Confidence 1 00 0000000001124556699875 8999888 799999999999999999999999998
Q ss_pred CccccCChhhH-hhCCceeecC-------CHHHHHHHHHHHhC
Q 036427 456 AGQEAGNVPYV-VENGCGKFSK-------SPKEIANMVSQWFG 490 (536)
Q Consensus 456 ~~~e~~na~~l-v~~g~g~~~~-------d~~~La~~I~~ll~ 490 (536)
.+|.. |+..+ .+.|+|..+. +.++|.++|+++++
T Consensus 387 ~DQ~~-na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~ 428 (480)
T 2vch_A 387 AEQKM-NAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLME 428 (480)
T ss_dssp TTHHH-HHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHT
T ss_pred ccchH-HHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhc
Confidence 87765 88887 5889998763 68999999999997
No 55
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=99.21 E-value=1.7e-09 Score=116.53 Aligned_cols=267 Identities=9% Similarity=0.006 Sum_probs=160.7
Q ss_pred HHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEE-EEecCCCCcccccccccCCEEEEcCHHHHHHHHHhC
Q 036427 235 AREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFT-TVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKAG 313 (536)
Q Consensus 235 ~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v-~~~~d~~~~~~~~~~~~~d~vi~~S~~~~~~l~~~g 313 (536)
..++.+.|++.++||++-....+......++.++ .-|+- ++..-.. .--....|.+++-.... . . +.
T Consensus 338 ~~~ia~~Ir~d~IDILVdL~g~t~~~~i~~aa~R----pAPVQvs~lGyp~----TTGl~~iDY~i~D~~~~-~-~-~~- 405 (631)
T 3q3e_A 338 LEFIRSVCESNGAAIFYMPSIGMDMTTIFASNTR----LAPIQAIALGHPA----TTHSDFIEYVIVEDDYV-G-S-EE- 405 (631)
T ss_dssp HHHHHHHHHHHTCSEEEESCCSSSHHHHHHTTSC----CSSEEEEECSSCS----CCCCTTCCEEEEEGGGC-C-C-GG-
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCchhHHHHhCC----CchheEeccCCCc----ccCcccCCEEEeCCCCC-C-c-cc-
Confidence 3577888999999999976555544333332211 24542 3322111 11134566666532110 0 0 11
Q ss_pred CCCCCEEEeCCC---CCCCCCCCCCchHHHHHHcCCCCC-CCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEE
Q 036427 314 LQASQIKVYGLP---VRPSFVKPVRPKVELRRELGMDED-LPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVL 389 (536)
Q Consensus 314 ~~~~ki~vignp---v~~~~~~~~~~~~~~r~~lgi~~~-~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~l 389 (536)
.-.+++..++.. .++....+ .+..++++++ ..+++.... ...|...+.++...+.+.+ .|+..++
T Consensus 406 ~ysEklirLP~~~~~~~p~~~~p------~r~~~~lp~~~G~v~Fg~fn-~~~Ki~p~~l~~WarIL~~----vP~s~L~ 474 (631)
T 3q3e_A 406 CFSETLLRLPKDALPYVPSALAP------EKVDYLLRENPEVVNIGIAS-TTMKLNPYFLEALKAIRDR----AKVKVHF 474 (631)
T ss_dssp GCSSEEEEECTTSSCCCCCTTCC------SSCCCCCCSCCSEEEEEEEE-CSTTCCHHHHHHHHHHHHH----CSSEEEE
T ss_pred CceeeEEECCCCccccCCcccCC------ccccccCCcCCCeEEEEECC-ccccCCHHHHHHHHHHHHh----CCCcEEE
Confidence 124677766642 22221111 1234566654 223322222 2356667777777777653 3555443
Q ss_pred -EEecCC----HHHHHHHHcCCCCCCEEEecChh--hHHHHHhhcCeEEECC---ChHHHHHHHHhCCcEEEeccCCccc
Q 036427 390 -VICGRN----KKLANKLLSTDWKIPVQVKGFVS--KMEEAMGACDCIITKA---GPGTIAEAMIRGLPIILNDFIAGQE 459 (536)
Q Consensus 390 -vi~G~~----~~l~~~l~~~~~~~~V~~~G~v~--~l~~ll~~aDv~V~~s---G~~tllEAma~GlPVI~~~~~~~~e 459 (536)
.+.|.. ....+.+.+.++.+++.|.|.++ +....|+.+|+++-++ |++|.+|||++|+|||+.+......
T Consensus 475 l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~as 554 (631)
T 3q3e_A 475 HFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHE 554 (631)
T ss_dssp EEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHH
T ss_pred EEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHH
Confidence 235532 23444455556667899999985 6668899999999885 6899999999999999988554333
Q ss_pred cCChhhHhhCCcee--ecCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC-----chHHHHHHHHHHHHhh
Q 036427 460 AGNVPYVVENGCGK--FSKSPKEIANMVSQWFGPKIDELKAMSQNALKLARP-----DAVFRIVQDLHELVRQ 525 (536)
Q Consensus 460 ~~na~~lv~~g~g~--~~~d~~~La~~I~~ll~~d~~~~~~m~~~a~~~a~~-----~~~~~i~~~i~~l~~~ 525 (536)
...+..+...|... +..|.++..+...+|.+ |++.+++++++.++.... ...+++.+.+.+++++
T Consensus 555 RvgaSlL~~~GLpE~LIA~d~eeYv~~Av~La~-D~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~~ 626 (631)
T 3q3e_A 555 HIDEGLFKRLGLPEWLIANTVDEYVERAVRLAE-NHQERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLNA 626 (631)
T ss_dssp HHHHHHHHHTTCCGGGEESSHHHHHHHHHHHHH-CHHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHHH
T ss_pred HhHHHHHHhcCCCcceecCCHHHHHHHHHHHhC-CHHHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHHH
Confidence 33445566677764 45799999999999999 999999999998876433 2234455555555554
No 56
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.15 E-value=2.1e-11 Score=116.02 Aligned_cols=138 Identities=20% Similarity=0.196 Sum_probs=99.1
Q ss_pred cCCCCCCCEEEEecCCCCCCcHHHHHHHHH-----HHhhhcccCCCCcEEEEEecCCHH-----HHHHHH--------c-
Q 036427 344 LGMDEDLPAVLLMGGGEGMGPIEATARALG-----NALYDENLGEPIGQVLVICGRNKK-----LANKLL--------S- 404 (536)
Q Consensus 344 lgi~~~~~~il~~gg~~g~k~~~~~l~al~-----~~l~~~~~~~~~~~~lvi~G~~~~-----l~~~l~--------~- 404 (536)
++.+++++.|+++||+.. .+.+++..+. +.+.+ ....++++++|.... +.+.+. .
T Consensus 22 ~~~~~~~~~VlVtgGS~~--~~n~li~~vl~~~~l~~L~~----~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~ 95 (224)
T 2jzc_A 22 LEGIIEEKALFVTCGATV--PFPKLVSCVLSDEFCQELIQ----YGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPI 95 (224)
T ss_dssp --CCCCSCCEEEECCSCC--SCHHHHHHHTSHHHHHHHHT----TTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSS
T ss_pred cCCCCCCCEEEEEcCCch--HHHHHHHHHHHHHHHHHHhc----CCCeEEEEEECCCchhhHHHHHHhhhcccccccccc
Confidence 455667788999999863 3455554442 44431 122678888997642 122220 0
Q ss_pred --------------CCCCCCEEEecChhhHHHHHh-hcCeEEECCChHHHHHHHHhCCcEEEeccC---CccccCChhhH
Q 036427 405 --------------TDWKIPVQVKGFVSKMEEAMG-ACDCIITKAGPGTIAEAMIRGLPIILNDFI---AGQEAGNVPYV 466 (536)
Q Consensus 405 --------------~~~~~~V~~~G~v~~l~~ll~-~aDv~V~~sG~~tllEAma~GlPVI~~~~~---~~~e~~na~~l 466 (536)
.....++...+|+++|.++|+ .||++|+++|.+|++|++++|+|.|++|.. .++|..|++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l 175 (224)
T 2jzc_A 96 DQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF 175 (224)
T ss_dssp CTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH
T ss_pred ccccccccccccccccCCceEEEeeccchHHHHHHhcCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH
Confidence 001235678899999999999 999999999999999999999999999985 34566689999
Q ss_pred hhCCceeecCCHHHHHHHHHHH
Q 036427 467 VENGCGKFSKSPKEIANMVSQW 488 (536)
Q Consensus 467 v~~g~g~~~~d~~~La~~I~~l 488 (536)
.+.|.+..+ +++.|.++|.++
T Consensus 176 ~~~G~~~~~-~~~~L~~~i~~l 196 (224)
T 2jzc_A 176 VELGYVWSC-APTETGLIAGLR 196 (224)
T ss_dssp HHHSCCCEE-CSCTTTHHHHHH
T ss_pred HHCCCEEEc-CHHHHHHHHHHH
Confidence 999988766 778888888777
No 57
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=98.63 E-value=2.3e-06 Score=86.69 Aligned_cols=268 Identities=13% Similarity=0.079 Sum_probs=132.8
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
|||||+..+. -|..-.+..+.++|++++| +.++.++..... ..+.+..|.....+.......
T Consensus 1 mkILii~~~~-~GD~i~~~p~l~~Lk~~~P-~~~i~~l~~~~~-------------~~l~~~~p~i~~v~~~~~~~~--- 62 (348)
T 1psw_A 1 MKILVIGPSW-VGDMMMSQSLYRTLQARYP-QAIIDVMAPAWC-------------RPLLSRMPEVNEAIPMPLGHG--- 62 (348)
T ss_dssp CEEEEECCSS-HHHHHHHHHHHHHHHHHST-TCEEEEEECGGG-------------HHHHTTCTTEEEEEEC--------
T ss_pred CeEEEEeccc-cCHHHHHHHHHHHHHHHCC-CCEEEEEECcch-------------hHHHhcCCccCEEEEecCCcc---
Confidence 7999987653 6999999999999999988 567755432110 011222221111111100000
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceE-EEEecCCCCcccccccccCCEEEEc--
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVF-TTVITDLSTCHPTWFHKLVTRCYCP-- 301 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~-v~~~~d~~~~~~~~~~~~~d~vi~~-- 301 (536)
........++.+.+++.+||+++..+..... ..+++..+ +|. +.+..+.. + ...+.....
T Consensus 63 ----~~~~~~~~~l~~~l~~~~~D~vid~~~~~~s--a~~~~~~~----~~~~ig~~~~~~-----~--~~~~~~~~~~~ 125 (348)
T 1psw_A 63 ----ALEIGERRKLGHSLREKRYDRAYVLPNSFKS--ALVPLFAG----IPHRTGWRGEMR-----Y--GLLNDVRVLDK 125 (348)
T ss_dssp ------CHHHHHHHHHHTTTTTCSEEEECSCCSGG--GHHHHHTT----CSEEEEECTTTC-----T--TTCTEEECCCT
T ss_pred ----ccchHHHHHHHHHHHhcCCCEEEECCCChHH--HHHHHHhC----CCEEeccCCCcc-----c--ccccccccCCC
Confidence 0111223466677888899999965442221 23344444 454 23322211 0 111111110
Q ss_pred --CHHHHHHHHHh----CCCCC--CEE-EeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEEecCC-C-CCCcH-HHHH
Q 036427 302 --TADVAKRAMKA----GLQAS--QIK-VYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLLMGGG-E-GMGPI-EATA 369 (536)
Q Consensus 302 --S~~~~~~l~~~----g~~~~--ki~-vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~~gg~-~-g~k~~-~~~l 369 (536)
.....+.+.+. |+.+. .+. .++. +.........+++++.++++.+.++|++.-|+ . ..+.. .+.+
T Consensus 126 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~---p~l~~~~~~~~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~ 202 (348)
T 1psw_A 126 EAWPLMVERYIALAYDKGIMRTAQDLPQPLLW---PQLQVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHY 202 (348)
T ss_dssp TTCCSHHHHHHHTTSCGGGCSSGGGSCSSCCC---CCCCCCHHHHHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHH
T ss_pred CCCchHHHHHHHHHhhcccccccccCCcccCC---ceeecCHHHHHHHHHHhCCCCCCcEEEEECCCCccccCCCCHHHH
Confidence 11123333332 21000 000 0111 11111112234566778887566666655444 3 22332 4455
Q ss_pred HHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcCCC---CCCE-EEecCh--hhHHHHHhhcCeEEEC-CChHHHHH
Q 036427 370 RALGNALYDENLGEPIGQVLVICGRNK-KLANKLLSTDW---KIPV-QVKGFV--SKMEEAMGACDCIITK-AGPGTIAE 441 (536)
Q Consensus 370 ~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~~~---~~~V-~~~G~v--~~l~~ll~~aDv~V~~-sG~~tllE 441 (536)
.++++.+.+ .+.+++++.|..+ +..+.+.+.-. ..++ .+.|.. .++.++++.||++|+. ||++.+
T Consensus 203 ~~l~~~L~~-----~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~Dsg~~Hl-- 275 (348)
T 1psw_A 203 AELAKQLID-----EGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHV-- 275 (348)
T ss_dssp HHHHHHHHH-----TTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESSHHHHH--
T ss_pred HHHHHHHHH-----CCCeEEEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHHHHhCCEEEecCCHHHHH--
Confidence 666666642 2566655443333 23333433210 1234 556654 5899999999999998 454443
Q ss_pred HHHhCCcEEEeccCCc
Q 036427 442 AMIRGLPIILNDFIAG 457 (536)
Q Consensus 442 Ama~GlPVI~~~~~~~ 457 (536)
|+++|+|+|++-...+
T Consensus 276 Aaa~g~P~v~lfg~t~ 291 (348)
T 1psw_A 276 AAALNRPLVALYGPSS 291 (348)
T ss_dssp HHHTTCCEEEEESSSC
T ss_pred HHHcCCCEEEEECCCC
Confidence 9999999999865544
No 58
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.54 E-value=8.6e-06 Score=90.92 Aligned_cols=178 Identities=13% Similarity=0.072 Sum_probs=119.8
Q ss_pred HHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCH---HHHHHHHcCCC-CCCEEEecC
Q 036427 341 RRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNK---KLANKLLSTDW-KIPVQVKGF 416 (536)
Q Consensus 341 r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~---~l~~~l~~~~~-~~~V~~~G~ 416 (536)
|..+|++++..++.++ ....|-..+.+....+.++. .|+.++++...... .+.+.+++.++ .++|.|.+.
T Consensus 514 R~~~gLp~~~v~f~~f--N~~~Ki~p~~~~~W~~IL~~----vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~ 587 (723)
T 4gyw_A 514 RSQYGLPEDAIVYCNF--NQLYKIDPSTLQMWANILKR----VPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPV 587 (723)
T ss_dssp GGGGTCCTTSEEEECC--SCGGGCCHHHHHHHHHHHHH----CSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred hhhcCCCCCCEEEEeC--CccccCCHHHHHHHHHHHHh----CCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCC
Confidence 5567888775333222 22234445666666666653 47776655543322 35556666665 467999998
Q ss_pred hh--hHHHHHhhcCeEEEC---CChHHHHHHHHhCCcEEEeccCCccccCChhhHhhCCceeec-CCHHHHHHHHHHHhC
Q 036427 417 VS--KMEEAMGACDCIITK---AGPGTIAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFS-KSPKEIANMVSQWFG 490 (536)
Q Consensus 417 v~--~l~~ll~~aDv~V~~---sG~~tllEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~d~~~La~~I~~ll~ 490 (536)
.+ +.-..|+.+|+++=+ +|+.|.+||+.+|+|||+.+.........+..+...|..-++ .|.++..+...+|-+
T Consensus 588 ~~~~~~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~~~~~Y~~~a~~la~ 667 (723)
T 4gyw_A 588 APKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKLGT 667 (723)
T ss_dssp CCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccCCHHHHHHHHHHHhc
Confidence 74 556778899999865 378999999999999999885443334456666677776554 588998888889988
Q ss_pred CCHHHHHHHHHHHHHh---cCCchHHHHHHHHHHHHhh
Q 036427 491 PKIDELKAMSQNALKL---ARPDAVFRIVQDLHELVRQ 525 (536)
Q Consensus 491 ~d~~~~~~m~~~a~~~---a~~~~~~~i~~~i~~l~~~ 525 (536)
|++.+.++++.-++. ..-+...+.++.+++.+++
T Consensus 668 -d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~ 704 (723)
T 4gyw_A 668 -DLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQ 704 (723)
T ss_dssp -CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHH
Confidence 999998888766543 2235666677777665543
No 59
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=98.52 E-value=3e-05 Score=78.88 Aligned_cols=268 Identities=12% Similarity=0.069 Sum_probs=137.6
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
..+|||||+..+- -|..-.+..+.++|++.+| +.+|.++...... + +.+..|.....+.......
T Consensus 6 l~~~~iLvi~~~~-lGD~i~~~P~l~~L~~~~P-~a~I~~l~~~~~~-~------------l~~~~p~vd~vi~~~~~~~ 70 (349)
T 3tov_A 6 LDYKRIVVTFLMH-LGDVILTTPFLEVLRKAAP-HSHITYVIDEKLQ-Q------------VMEYNPNIDELIVVDKKGR 70 (349)
T ss_dssp CTTCEEEEECCCC-HHHHHTTHHHHHHHHHHCT-TSEEEEEEEGGGG-G------------GTSSCTTCSEEEEECCSSH
T ss_pred CCCCEEEEEecCc-ccHHHHHHHHHHHHHHHCC-CCEEEEEECcchh-H------------HHhcCCCccEEEEeCcccc
Confidence 4568999998654 6999999999999999988 4566443221110 0 1122222221111110000
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCC-CEEEEcCcccchHHHHHHHHcCCCCCceEE-EEecCCCCcccccccccCCEEE
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQP-DIIISVHPLMQHVPLRILRAKGLLKKIVFT-TVITDLSTCHPTWFHKLVTRCY 299 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kP-DvVi~~~~~~~~i~~~~~~~~g~~~~ip~v-~~~~d~~~~~~~~~~~~~d~vi 299 (536)
........++.+.|++.++ |+++..+..... ..+....| +|.. .+.... .....+..+
T Consensus 71 -------~~~~~~~~~l~~~Lr~~~y~D~vidl~~~~rs--~~l~~~~~----a~~riG~~~~~-------~~~~~~~~~ 130 (349)
T 3tov_A 71 -------HNSISGLNEVAREINAKGKTDIVINLHPNERT--SYLAWKIH----APITTGMSHFL-------FRPFMTKYT 130 (349)
T ss_dssp -------HHHHHHHHHHHHHHHHHCCCCEEEECCCSHHH--HHHHHHHC----CSEEEECCCTT-------TGGGCSEEC
T ss_pred -------cccHHHHHHHHHHHhhCCCCeEEEECCCChHH--HHHHHHhC----CCeEEecCCCC-------ccccccccc
Confidence 0112223456677888999 999987654322 22334444 4432 221111 111112211
Q ss_pred Ec-------CHHHHHHHHHhCCCCCCEEEeCCCCCCCCCCCCCch---HHHHHHcCCCCCCCEEEEe-cCCCCCCcH-HH
Q 036427 300 CP-------TADVAKRAMKAGLQASQIKVYGLPVRPSFVKPVRPK---VELRRELGMDEDLPAVLLM-GGGEGMGPI-EA 367 (536)
Q Consensus 300 ~~-------S~~~~~~l~~~g~~~~ki~vignpv~~~~~~~~~~~---~~~r~~lgi~~~~~~il~~-gg~~g~k~~-~~ 367 (536)
.. .+...+.+...|++.. .......+.+.... +++.+.+|++.+.++|++. |++...+.. .+
T Consensus 131 ~~~~~~~h~v~r~~~ll~~lg~~~~------~~~~~~l~~~~~~~~~~~~~l~~~g~~~~~~~i~i~pga~~~~k~wp~~ 204 (349)
T 3tov_A 131 RLDRKTRHAADMYINVLEQLGVTDT------SNSGLHIEICEEWRCQAQEFYSSHGLTDTDILIGFNIGSAVPEKRWPAE 204 (349)
T ss_dssp CCCTTTSCHHHHHHHHHHHTTCCCC------CCCCCCCCCCHHHHHHHHHHHHHTTCCTTCCEEEEECCCSSGGGCCCHH
T ss_pred cCCCCCccHHHHHHHHHHHhCCCcc------CCCceeeeCCHHHHHHHHHHHHHcCCCCCCCEEEEeCCCCCccCCCCHH
Confidence 11 1122222333454310 00111111111111 2234456787777777654 444444443 45
Q ss_pred HHHHHHHHhhhcccCCCCcEEEEEecCCH-HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEEC-CChHHHHHHH
Q 036427 368 TARALGNALYDENLGEPIGQVLVICGRNK-KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITK-AGPGTIAEAM 443 (536)
Q Consensus 368 ~l~al~~~l~~~~~~~~~~~~lvi~G~~~-~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~-sG~~tllEAm 443 (536)
.+.++++.+.+ .+.++++++|..+ +..+.+.+.-....+.+.|.. .++..+++.||++|+. ||++-+ |.
T Consensus 205 ~~~~l~~~l~~-----~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali~~a~~~i~~DsG~~Hl--Aa 277 (349)
T 3tov_A 205 RFAHVADYFGR-----LGYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAMNRCNLLITNDSGPMHV--GI 277 (349)
T ss_dssp HHHHHHHHHHH-----HTCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHHHTCSEEEEESSHHHHH--HH
T ss_pred HHHHHHHHHHh-----CCCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHHHhCCEEEECCCCHHHH--HH
Confidence 56666666652 2456655444443 333444332112335666654 5899999999999998 676555 89
Q ss_pred HhCCcEEEeccCCc
Q 036427 444 IRGLPIILNDFIAG 457 (536)
Q Consensus 444 a~GlPVI~~~~~~~ 457 (536)
++|+|+|++-...+
T Consensus 278 a~g~P~v~lfg~t~ 291 (349)
T 3tov_A 278 SQGVPIVALYGPSN 291 (349)
T ss_dssp TTTCCEEEECSSCC
T ss_pred hcCCCEEEEECCCC
Confidence 99999999865443
No 60
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=98.33 E-value=0.00021 Score=71.52 Aligned_cols=301 Identities=11% Similarity=0.009 Sum_probs=143.6
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVIHQ 224 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 224 (536)
||||++..+. -|..-.+..+.++|++++| +.++.+...... ..+.+..|.....+...... +.+
T Consensus 1 ~~ILii~~~~-iGD~i~~~p~l~~Lk~~~P-~a~I~~l~~~~~-------------~~l~~~~p~vd~vi~~~~~~-~~~ 64 (326)
T 2gt1_A 1 MRVLIVKTSS-MGDVLHTLPALTDAQQAIP-GIKFDWVVEEGF-------------AQIPSWHAAVERVIPVAIRR-WRK 64 (326)
T ss_dssp CEEEEECCCC-HHHHHHHHHHHHHHHHHST-TCEEEEEEEGGG-------------THHHHTSTTEEEEEEECHHH-HHT
T ss_pred CeEEEEeccc-cchHHhHHHHHHHHHHhCC-CCEEEEEEehhh-------------hHHHhcCCCCCEEEEccHHH-hhh
Confidence 7999987664 6999999999999999988 466654432110 00122222111111110000 000
Q ss_pred hhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEc--C
Q 036427 225 SNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCP--T 302 (536)
Q Consensus 225 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~--S 302 (536)
..+.........++.+.+++.++|+++....... ....+.+..+ .+.+.+.... ....|.....+..+.. .
T Consensus 65 ~~~~~~~~~~~~~~~~~lr~~~~D~vidl~~~~~-s~~~~~~l~~----~~~ig~~~~~--~~~~~~~~~~~~~~~~~~~ 137 (326)
T 2gt1_A 65 AWFSAPIKAERKAFREALQAKNYDAVIDAQGLVK-SAALVTRLAH----GVKHGMDWQT--AREPLASLFYNRKHHIAKQ 137 (326)
T ss_dssp TTTSHHHHHHHHHHHHHHHHSBCSEEEECSCCHH-HHHHTGGGSB----SCEEEECTTT--SSSGGGGGGCSEEECCCSS
T ss_pred ccchHHHHHHHHHHHHHHhccCCCEEEECCccHH-HHHHHHHHcC----CcEEccCcCc--ccchhHHhhhccccCCCcC
Confidence 0000111222345666788899999997654321 1112223223 2333333221 0011111222333321 1
Q ss_pred HHHHHH----H-HHhCCCCCCEEEeCCCCCCCCCCCCCchHHHHHHcCCCCCCCEEEE-ecCCCCCCcH-HHHHHHHHHH
Q 036427 303 ADVAKR----A-MKAGLQASQIKVYGLPVRPSFVKPVRPKVELRRELGMDEDLPAVLL-MGGGEGMGPI-EATARALGNA 375 (536)
Q Consensus 303 ~~~~~~----l-~~~g~~~~ki~vignpv~~~~~~~~~~~~~~r~~lgi~~~~~~il~-~gg~~g~k~~-~~~l~al~~~ 375 (536)
....+. + ...|++... ..+. +.. .++..++.+.. +.++|++ .|++...+.. .+.+.++++.
T Consensus 138 ~h~~~~~~~ll~~~lg~~~~~-------~~~~-~~~---~~~~~~~~~~~-~~~~i~l~pga~~~~k~wp~~~~~~l~~~ 205 (326)
T 2gt1_A 138 QHAVERTRELFAKSLGYSKPQ-------TQGD-YAI---AQHFLTNLPTD-AGEYAVFLHATTRDDKHWPEEHWRELIGL 205 (326)
T ss_dssp SCHHHHHHHHHHHHHTCCCCS-------SCCC-CCC---HHHHHTTCCTT-TTSEEEEECCCSSGGGSCCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCCCC-------CCcc-ccc---Cchhhhhcccc-CCCEEEEEeCCCCccccCCHHHHHHHHHH
Confidence 112221 2 123544211 0111 111 11222233333 3455544 4444333332 4566667666
Q ss_pred hhhcccCCCCcEEEEEecCCH--HHHHHHHcCCCCCCEEEecCh--hhHHHHHhhcCeEEEC-CChHHHHHHHHhCCcEE
Q 036427 376 LYDENLGEPIGQVLVICGRNK--KLANKLLSTDWKIPVQVKGFV--SKMEEAMGACDCIITK-AGPGTIAEAMIRGLPII 450 (536)
Q Consensus 376 l~~~~~~~~~~~~lvi~G~~~--~l~~~l~~~~~~~~V~~~G~v--~~l~~ll~~aDv~V~~-sG~~tllEAma~GlPVI 450 (536)
+. ..+.+++++.|... +..+.+.+. . .++.+.|.. .++.++++.||++|+. ||++-+ |.++|+|+|
T Consensus 206 L~-----~~~~~vvl~~g~~~e~~~~~~i~~~-~-~~~~l~g~~sl~el~ali~~a~l~I~~DSG~~Hl--Aaa~g~P~v 276 (326)
T 2gt1_A 206 LA-----DSGIRIKLPWGAPHEEERAKRLAEG-F-AYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHL--TAALDRPNI 276 (326)
T ss_dssp TT-----TTCCEEEECCSSHHHHHHHHHHHTT-C-TTEEECCCCCHHHHHHHHHTCSEEEEESSHHHHH--HHHTTCCEE
T ss_pred HH-----HCCCcEEEecCCHHHHHHHHHHHhh-C-CcccccCCCCHHHHHHHHHhCCEEEecCCcHHHH--HHHcCCCEE
Confidence 64 23566554435322 223344332 1 346677754 5999999999999998 676655 778999999
Q ss_pred EeccCCccccC----ChhhHhhCCceeecC--CHHHHHHHHHHHhC
Q 036427 451 LNDFIAGQEAG----NVPYVVENGCGKFSK--SPKEIANMVSQWFG 490 (536)
Q Consensus 451 ~~~~~~~~e~~----na~~lv~~g~g~~~~--d~~~La~~I~~ll~ 490 (536)
++-...+...+ ....++... ...+. +++++.+++.++++
T Consensus 277 ~lfg~t~p~~~~P~~~~~~~~~~~-~~cm~~I~~~~V~~~i~~~l~ 321 (326)
T 2gt1_A 277 TVYGPTDPGLIGGYGKNQMVCRAP-GNELSQLTANAVKQFIEENAE 321 (326)
T ss_dssp EEESSSCHHHHCCCSSSEEEEECG-GGCGGGCCHHHHHHHHHHTTT
T ss_pred EEECCCChhhcCCCCCCceEecCC-cccccCCCHHHHHHHHHHHHH
Confidence 98544332210 000011100 01112 78999999998887
No 61
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=97.92 E-value=7.9e-05 Score=83.38 Aligned_cols=222 Identities=13% Similarity=0.066 Sum_probs=137.1
Q ss_pred cCCEEEEcCHHHHHHHHH-hCCCCCCEEEeCCCCCCCCCCCC---CchHHHHHHcCCCCCCCEEEEecCCCCCC------
Q 036427 294 LVTRCYCPTADVAKRAMK-AGLQASQIKVYGLPVRPSFVKPV---RPKVELRRELGMDEDLPAVLLMGGGEGMG------ 363 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~-~g~~~~ki~vignpv~~~~~~~~---~~~~~~r~~lgi~~~~~~il~~gg~~g~k------ 363 (536)
..|.+++.++...+.+.+ .++++.++..+|.|-.+.++... ...+++++.+++++++++||++....+..
T Consensus 478 ~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~kk~ILyaPT~r~~~~~~~~~ 557 (729)
T 3l7i_A 478 RWDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFVSKGK 557 (729)
T ss_dssp TCSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCCGGGS
T ss_pred cCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCchHHHhcccchHHHHHHHHHHhCCCCCCeEEEEeeeeeCCccccccc
Confidence 468999999999888776 47777889999998765544222 12456888999999999999876533211
Q ss_pred ---cHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCChHHHH
Q 036427 364 ---PIEATARALGNALYDENLGEPIGQVLVICGRNKKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAGPGTIA 440 (536)
Q Consensus 364 ---~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG~~tll 440 (536)
.....+..+.+.+. .+. .++.-.++...+.+........+.......++.++|..||++|+-- +.++.
T Consensus 558 ~~~~~~~~~~~l~~~l~------~~~--~li~r~Hp~~~~~~~~~~~~~~~~~~~~~~di~~ll~~aD~lITDy-SSv~f 628 (729)
T 3l7i_A 558 YLFELKIDLDNLYKELG------DDY--VILLRMHYLISNALDLSGYENFAIDVSNYNDVSELFLISDCLITDY-SSVMF 628 (729)
T ss_dssp SCCCCTTCHHHHHHHHT------TTE--EEEECCCHHHHTTCCCTTCTTTEEECTTCSCHHHHHHTCSEEEESS-CTHHH
T ss_pred cccchhhHHHHHHHHcC------CCe--EEEEecCcchhccccccccCCcEEeCCCCcCHHHHHHHhCEEEeec-hHHHH
Confidence 11122444555442 333 3333445533322221223445554544468999999999999863 35789
Q ss_pred HHHHhCCcEEEeccCCccccCCh-h---hHhhCCceeecCCHHHHHHHHHHHhCCCHH-H---HHHHHHHHHHhcCCchH
Q 036427 441 EAMIRGLPIILNDFIAGQEAGNV-P---YVVENGCGKFSKSPKEIANMVSQWFGPKID-E---LKAMSQNALKLARPDAV 512 (536)
Q Consensus 441 EAma~GlPVI~~~~~~~~e~~na-~---~lv~~g~g~~~~d~~~La~~I~~ll~~d~~-~---~~~m~~~a~~~a~~~~~ 512 (536)
|++..++|||.....-..-..+. . ...+.--|.++.+.++|.++|..... .++ . ++++.+.-..+....++
T Consensus 629 D~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~~~~~~eL~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~dg~as 707 (729)
T 3l7i_A 629 DYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPIYTEPYGLAKELKNLDK-VQQQYQEKIDAFYDRFCSVDNGKAS 707 (729)
T ss_dssp HHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCEESSHHHHHHHHTTHHH-HHHHTHHHHHHHHHHHSTTCCSCHH
T ss_pred hHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCeECCHHHHHHHHhhhhc-cchhHHHHHHHHHHHhCCccCChHH
Confidence 99999999999865322111000 0 01122234566799999999987764 322 2 22222222234456899
Q ss_pred HHHHHHHHHHHhh
Q 036427 513 FRIVQDLHELVRQ 525 (536)
Q Consensus 513 ~~i~~~i~~l~~~ 525 (536)
+++++.|.+...+
T Consensus 708 ~ri~~~i~~~~~~ 720 (729)
T 3l7i_A 708 QYIGDLIHKDIKE 720 (729)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcC
Confidence 9999999876654
No 62
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=89.03 E-value=0.93 Score=40.72 Aligned_cols=66 Identities=17% Similarity=0.205 Sum_probs=41.2
Q ss_pred HHHHhhcCeEE-ECCChHHHH---HHHHhCCcEEEeccCCccccCChhhHhhC--CceeecCCHHHHHHHHHHHhC
Q 036427 421 EEAMGACDCII-TKAGPGTIA---EAMIRGLPIILNDFIAGQEAGNVPYVVEN--GCGKFSKSPKEIANMVSQWFG 490 (536)
Q Consensus 421 ~~ll~~aDv~V-~~sG~~tll---EAma~GlPVI~~~~~~~~e~~na~~lv~~--g~g~~~~d~~~La~~I~~ll~ 490 (536)
.-+...||.+| +|+|.+|+. |++..++||++.+... . ...++-+. ..-.+.+|++++.+.+.++++
T Consensus 102 ~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~-~---~~gfi~~~~~~~i~~~~~~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 102 NINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP-E---AEKFFTSLDAGLVHVAADVAGAIAAVKQLLA 173 (176)
T ss_dssp CCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH-H---HHHHHHHHCTTTEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc-c---ccccCChhhcCeEEEcCCHHHHHHHHHHHHH
Confidence 34456788755 466666554 5788999999998621 0 11122222 223345699999998888764
No 63
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=86.85 E-value=1.4 Score=39.06 Aligned_cols=69 Identities=22% Similarity=0.280 Sum_probs=44.4
Q ss_pred HHHHhhcCeEEEC--C---ChHHHHH---HHHhCCcEEEeccCCccc-cCChh---hHhhC-----------------Cc
Q 036427 421 EEAMGACDCIITK--A---GPGTIAE---AMIRGLPIILNDFIAGQE-AGNVP---YVVEN-----------------GC 471 (536)
Q Consensus 421 ~~ll~~aDv~V~~--s---G~~tllE---Ama~GlPVI~~~~~~~~e-~~na~---~lv~~-----------------g~ 471 (536)
.+.+..||++|.- . -.+|.+| |.+.|+||++.-...-+. ..+.. .+.+. .+
T Consensus 64 ~~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~~~D~R~~g~~~~~~~~~~~~~~e~~f~~~N~~~~G~i~~~ 143 (162)
T 3ehd_A 64 TENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALYTDSRQQGADNHQKLDALNEIAENQFHYLNLYTVGLIKLN 143 (162)
T ss_dssp HHHHHTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEECCCGGGCCTTCHHHHHHTTSTTCCCSCCCCHHHHHHHHTT
T ss_pred HHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEcCcccccCCcchhhhhhHHHhhhhhhhhhHHHhhhHHhC
Confidence 3668999998863 2 2689999 899999999986431100 00101 11111 25
Q ss_pred eeecCCHHHHHHHHHHHh
Q 036427 472 GKFSKSPKEIANMVSQWF 489 (536)
Q Consensus 472 g~~~~d~~~La~~I~~ll 489 (536)
|.++.+.+++.+.|...+
T Consensus 144 g~~~~~~~~~~~~l~~~~ 161 (162)
T 3ehd_A 144 GRVVSSEEDLLEEIKQRL 161 (162)
T ss_dssp EEEESSHHHHHHHHHHTC
T ss_pred CeEEeCHHHHHHHHHHHh
Confidence 677789999998887765
No 64
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=86.29 E-value=40 Score=37.22 Aligned_cols=160 Identities=11% Similarity=0.009 Sum_probs=94.4
Q ss_pred cCCEEEEcCHHHHHHHHH------hCCCCCCEEEeCCCCCCCCCC----CC---------------------------C-
Q 036427 294 LVTRCYCPTADVAKRAMK------AGLQASQIKVYGLPVRPSFVK----PV---------------------------R- 335 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~------~g~~~~ki~vignpv~~~~~~----~~---------------------------~- 335 (536)
.++.|-.+|+-..+.++. +..-+.++.-+-|++++..+. |. .
T Consensus 402 ~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~ 481 (796)
T 2c4m_A 402 AAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYAD 481 (796)
T ss_dssp HCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGG
T ss_pred hcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCC
Confidence 456778888888877664 222356788888999877662 11 0
Q ss_pred c--------------hHH----HHHHcCC--CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCC----cEEEEE
Q 036427 336 P--------------KVE----LRRELGM--DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPI----GQVLVI 391 (536)
Q Consensus 336 ~--------------~~~----~r~~lgi--~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~----~~~lvi 391 (536)
+ +.+ +++++|+ +++.+++.++.+....|...-.+......+.+.. .+|. ...+++
T Consensus 482 d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~-~~~~~~~~p~q~If 560 (796)
T 2c4m_A 482 DKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIK-EDGLTDIPARTVIF 560 (796)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHH-TSCCCSSCCEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHh-hCCCCCCCCeEEEE
Confidence 1 111 2445565 4567777788887777776552333333332211 1221 234677
Q ss_pred ecCCH-------HHHHHHHcC--------CCCC--CEEEec-Ch-hhHHHHHhhcCeEEECC--C----hHHHHHHHHhC
Q 036427 392 CGRNK-------KLANKLLST--------DWKI--PVQVKG-FV-SKMEEAMGACDCIITKA--G----PGTIAEAMIRG 446 (536)
Q Consensus 392 ~G~~~-------~l~~~l~~~--------~~~~--~V~~~G-~v-~~l~~ll~~aDv~V~~s--G----~~tllEAma~G 446 (536)
+|++. .+.+.+.+. .... +|.|+. |- +--..+++.||+...+| | |++=+=+|..|
T Consensus 561 ~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NG 640 (796)
T 2c4m_A 561 GAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNG 640 (796)
T ss_dssp ECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTT
T ss_pred EecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcC
Confidence 78764 122222221 3444 566654 43 35567789999999987 2 46667799999
Q ss_pred CcEEEecc
Q 036427 447 LPIILNDF 454 (536)
Q Consensus 447 lPVI~~~~ 454 (536)
.+.|.+--
T Consensus 641 aL~iGtLD 648 (796)
T 2c4m_A 641 ALTLGTMD 648 (796)
T ss_dssp CEEEEESS
T ss_pred CeEEeccC
Confidence 99997653
No 65
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=84.62 E-value=1.2 Score=40.68 Aligned_cols=71 Identities=18% Similarity=0.197 Sum_probs=41.9
Q ss_pred hhHHHHHhhcCeEEE-CCChHHH---HHHHHhCCcEEEeccCCccccCChhhHhhCC---------ceeecCCHHHHHHH
Q 036427 418 SKMEEAMGACDCIIT-KAGPGTI---AEAMIRGLPIILNDFIAGQEAGNVPYVVENG---------CGKFSKSPKEIANM 484 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~-~sG~~tl---lEAma~GlPVI~~~~~~~~e~~na~~lv~~g---------~g~~~~d~~~La~~ 484 (536)
..-.-+...||.+|. |+|.+|+ .||+..++||++.+..+.... ....+++.| .-.+++|++++.+.
T Consensus 110 ~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~~g~w~~-~l~~~~~~G~fi~~~~~~~i~~~~~~ee~~~~ 188 (195)
T 1rcu_A 110 MRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRGTGGWTD-RISQVLIDGKYLDNRRIVEIHQAWTVEEAVQI 188 (195)
T ss_dssp HHHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETTSCHHHH-HGGGGCBTTTBSSTTCCSCEEEESSHHHHHHH
T ss_pred HHHHHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECCCCccHH-HHHHHHHcCCcCCHHHcCeEEEeCCHHHHHHH
Confidence 344566778997554 5566655 458889999999975332110 011222222 12234589999888
Q ss_pred HHHHh
Q 036427 485 VSQWF 489 (536)
Q Consensus 485 I~~ll 489 (536)
|.+++
T Consensus 189 l~~~~ 193 (195)
T 1rcu_A 189 IEQIL 193 (195)
T ss_dssp HHTC-
T ss_pred HHHHh
Confidence 76543
No 66
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=84.56 E-value=17 Score=40.26 Aligned_cols=111 Identities=14% Similarity=0.017 Sum_probs=63.5
Q ss_pred HHcCC--CCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCC----cEEEEEecCCH-------HHHHHHHcC---
Q 036427 342 RELGM--DEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPI----GQVLVICGRNK-------KLANKLLST--- 405 (536)
Q Consensus 342 ~~lgi--~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~----~~~lvi~G~~~-------~l~~~l~~~--- 405 (536)
++.|+ +++.+++.++.+...+|...-++......+.+.. .++. ...++++|++. .+.+.+.+.
T Consensus 540 ~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~-~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~ 618 (824)
T 2gj4_A 540 REYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIK-KEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDV 618 (824)
T ss_dssp HHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHH-HCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHH
T ss_pred HHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHH-hCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHH
Confidence 34565 4566777788887777776544222223332110 1221 12457778764 122222221
Q ss_pred -----CCCC--CEEEec-Ch-hhHHHHHhhcCeEEECC--C----hHHHHHHHHhCCcEEEec
Q 036427 406 -----DWKI--PVQVKG-FV-SKMEEAMGACDCIITKA--G----PGTIAEAMIRGLPIILND 453 (536)
Q Consensus 406 -----~~~~--~V~~~G-~v-~~l~~ll~~aDv~V~~s--G----~~tllEAma~GlPVI~~~ 453 (536)
.... +|.|+. |- +--..+++.||+...+| | |++=+=+|..|.+.|++-
T Consensus 619 in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtl 681 (824)
T 2gj4_A 619 VNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTM 681 (824)
T ss_dssp HTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECS
T ss_pred hccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEe
Confidence 1234 566654 43 34567789999999987 1 455677999999999965
No 67
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=83.81 E-value=0.99 Score=40.17 Aligned_cols=63 Identities=11% Similarity=0.200 Sum_probs=38.7
Q ss_pred hHHHHHhhcCeEEE--C-C--ChHHHHH---HHHhCCcEEEec-cCCccccCChhhHhhCCceeec---CCHHHHH
Q 036427 419 KMEEAMGACDCIIT--K-A--GPGTIAE---AMIRGLPIILND-FIAGQEAGNVPYVVENGCGKFS---KSPKEIA 482 (536)
Q Consensus 419 ~l~~ll~~aDv~V~--~-s--G~~tllE---Ama~GlPVI~~~-~~~~~e~~na~~lv~~g~g~~~---~d~~~La 482 (536)
++ +.+..||++|. . . -++|..| |.+.|+|||+.. ..+.........++..+...++ .+.++|+
T Consensus 75 D~-~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~algKPVv~l~~~~d~~~~~~~NlMl~~~~~~~~~~~~~~~~l~ 149 (167)
T 1s2d_A 75 DL-TGISNATCGVFLYDMDQLDDGSAFXIGFMRAMHKPVILVPFTEHPEKEKKMNLMIAQGVTTIIDGNTEFEKLA 149 (167)
T ss_dssp HH-HHHHHCSEEEEEEESSSCCHHHHHHHHHHHHTTCCEEEEEECSCTTSCCEECHHHHHHCSEECCTTTSGGGGG
T ss_pred HH-HHHHhCCEEEEECCCCCCCCCceeehhhHhhCCCeEEEEEecCCcccCCcEeeeecCcccEEecCCCCHHHHh
Confidence 44 56899999887 2 1 3789999 999999999995 3322211222234555555444 3555443
No 68
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=81.13 E-value=23 Score=39.15 Aligned_cols=184 Identities=10% Similarity=-0.036 Sum_probs=103.3
Q ss_pred cCCEEEEcCHHHHHHHHH------hCCCCCCEEEeCCCCCCCCCC----C---------------------------CCc
Q 036427 294 LVTRCYCPTADVAKRAMK------AGLQASQIKVYGLPVRPSFVK----P---------------------------VRP 336 (536)
Q Consensus 294 ~~d~vi~~S~~~~~~l~~------~g~~~~ki~vignpv~~~~~~----~---------------------------~~~ 336 (536)
.++.|-.+|+-..+.++. +..-+.++.-+-|++++..+. | ..+
T Consensus 413 ~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d 492 (796)
T 1l5w_A 413 GGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADD 492 (796)
T ss_dssp HSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGC
T ss_pred hcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCC
Confidence 556777888888877654 222356788888888654331 0 000
Q ss_pred --------------hHH----HHHHcCCC--CCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCC----cEEEEEe
Q 036427 337 --------------KVE----LRRELGMD--EDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPI----GQVLVIC 392 (536)
Q Consensus 337 --------------~~~----~r~~lgi~--~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~----~~~lvi~ 392 (536)
+.+ +++++|+. ++.+++.++.+...+|...-.+......+.+.. .+|. ...++++
T Consensus 493 ~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~-~~~~~~~~p~q~If~ 571 (796)
T 1l5w_A 493 AKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIR-ENPQADRVPRVFLFG 571 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHH-TCTTCCCCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHh-cCCCCCCCCeEEEEE
Confidence 112 24556764 566777778777777776542333333332211 2322 2346777
Q ss_pred cCCH-------HHHHHHHcC--------CCCC--CEEEec-Ch-hhHHHHHhhcCeEEECC--C----hHHHHHHHHhCC
Q 036427 393 GRNK-------KLANKLLST--------DWKI--PVQVKG-FV-SKMEEAMGACDCIITKA--G----PGTIAEAMIRGL 447 (536)
Q Consensus 393 G~~~-------~l~~~l~~~--------~~~~--~V~~~G-~v-~~l~~ll~~aDv~V~~s--G----~~tllEAma~Gl 447 (536)
|++. .+.+.+.+. .... +|.|+. |- +--..+++.||+...+| | |++=+=+|..|.
T Consensus 572 GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGa 651 (796)
T 1l5w_A 572 AKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGA 651 (796)
T ss_dssp CCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTC
T ss_pred ecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCC
Confidence 8764 122222221 2344 566654 43 35567789999999987 1 456677999999
Q ss_pred cEEEeccCCccccCChhhHhh--CCceeecC-CHHHHHH
Q 036427 448 PIILNDFIAGQEAGNVPYVVE--NGCGKFSK-SPKEIAN 483 (536)
Q Consensus 448 PVI~~~~~~~~e~~na~~lv~--~g~g~~~~-d~~~La~ 483 (536)
+.|.+--+... +...+ .+.|+++. +++++.+
T Consensus 652 L~iGtLDGanv-----Ei~e~vG~~NgF~FG~~~~ev~~ 685 (796)
T 1l5w_A 652 LTVGTLDGANV-----EIAEKVGEENIFIFGHTVEQVKA 685 (796)
T ss_dssp EEEECSCTTHH-----HHHHHHCGGGSEECSCCHHHHHH
T ss_pred eeecCcCCeee-----ehhhccCCCcEEEecCCHHHHHH
Confidence 99965533322 22222 34566664 6666653
No 69
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=77.67 E-value=14 Score=33.29 Aligned_cols=71 Identities=21% Similarity=0.292 Sum_probs=41.1
Q ss_pred hhHHHHHhhcCeEEE-CCChHHHHH---HHH------hCCcEEEeccCCc-ccc-CChhhHhhCCc--------eeecCC
Q 036427 418 SKMEEAMGACDCIIT-KAGPGTIAE---AMI------RGLPIILNDFIAG-QEA-GNVPYVVENGC--------GKFSKS 477 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~-~sG~~tllE---Ama------~GlPVI~~~~~~~-~e~-~na~~lv~~g~--------g~~~~d 477 (536)
..-.-+...||.+|. |+|.+|+-| ++. .++||++.+..+- ... .-.+.+++.|. -.+++|
T Consensus 89 ~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~~g~~~~l~~~l~~~~~~Gfi~~~~~~~~~~~~~ 168 (191)
T 1t35_A 89 ERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHLKLIHSSSR 168 (191)
T ss_dssp HHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTTSSCTTHHHHEEEESS
T ss_pred HHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecCCcccchHHHHHHHHHHCCCCCHHHcCeEEEeCC
Confidence 445667788998665 556777765 564 6899999985321 110 00122334331 223457
Q ss_pred HHHHHHHHHHH
Q 036427 478 PKEIANMVSQW 488 (536)
Q Consensus 478 ~~~La~~I~~l 488 (536)
++++.+.+.+.
T Consensus 169 ~~e~~~~l~~~ 179 (191)
T 1t35_A 169 PDELIEQMQNY 179 (191)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHh
Confidence 88887777654
No 70
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=76.71 E-value=3.9 Score=35.65 Aligned_cols=67 Identities=15% Similarity=0.165 Sum_probs=43.5
Q ss_pred HHHHhhcCeEEECC---ChHHHHH---HHHhCCcEEEeccCCccccCChhhHhhC-Cc--eeec---CCHHHHHHHHHHH
Q 036427 421 EEAMGACDCIITKA---GPGTIAE---AMIRGLPIILNDFIAGQEAGNVPYVVEN-GC--GKFS---KSPKEIANMVSQW 488 (536)
Q Consensus 421 ~~ll~~aDv~V~~s---G~~tllE---Ama~GlPVI~~~~~~~~e~~na~~lv~~-g~--g~~~---~d~~~La~~I~~l 488 (536)
.+.+..||++|.-- ..+|.+| |.+.|+||++.-.... ......+++. .. -+.+ .+ +++.+.|.++
T Consensus 63 ~~~i~~aD~vvA~l~~~d~Gt~~EiG~A~algkPV~~l~~~~~--~~~ls~mi~G~~~~~~~~~~~Y~~-~el~~il~~f 139 (152)
T 4fyk_A 63 LNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQS--GRVLSAMIRGAADGSRFQVWDYAE-GEVETMLDRY 139 (152)
T ss_dssp HHHHHHCSEEEEECSSCCHHHHHHHHHHHHTTCCEEEEECGGG--SCCCCHHHHHHCCSSSEEEEECCT-TCHHHHHHHH
T ss_pred HHHHHHCCEEEEeCCCCCCCHHHHHHHHHHcCCeEEEEEeCCc--cchhHHHHcCCCCCCeEEEEEecH-HHHHHHHHHH
Confidence 46789999988753 3678899 8999999999654221 1122323322 21 1222 35 8888888888
Q ss_pred hC
Q 036427 489 FG 490 (536)
Q Consensus 489 l~ 490 (536)
++
T Consensus 140 ~~ 141 (152)
T 4fyk_A 140 FE 141 (152)
T ss_dssp HC
T ss_pred HH
Confidence 87
No 71
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=76.61 E-value=8.7 Score=33.75 Aligned_cols=69 Identities=16% Similarity=0.123 Sum_probs=43.6
Q ss_pred HHHHhhcCeEEEC--C----C--hHHHHH---HHHhCCcEEEeccCCc-----------------cccC-ChhhHhhCCc
Q 036427 421 EEAMGACDCIITK--A----G--PGTIAE---AMIRGLPIILNDFIAG-----------------QEAG-NVPYVVENGC 471 (536)
Q Consensus 421 ~~ll~~aDv~V~~--s----G--~~tllE---Ama~GlPVI~~~~~~~-----------------~e~~-na~~lv~~g~ 471 (536)
.+.+..||++|.- . . ++|..| |.+.|+|||+...... ++.+ ....++..++
T Consensus 62 ~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l~~d~r~~~~~~~~~~d~~g~~vedf~~~~NLMl~~~~ 141 (161)
T 2f62_A 62 IQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFTSDRRNMREKYGSGVDKDNLRVEGFGLPFNLMLYDGV 141 (161)
T ss_dssp HHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEECSCCSCHHHHHTSSBCTTSCBCCCSSCSSCGGGCCSS
T ss_pred HHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHHCCCEEEEEEcCchhhhhhcccccccccccccccCCcchhhhhhhh
Confidence 5889999997764 1 2 689999 8999999999764311 0000 1112333333
Q ss_pred eeecCCHHHHHHHHHHHhC
Q 036427 472 GKFSKSPKEIANMVSQWFG 490 (536)
Q Consensus 472 g~~~~d~~~La~~I~~ll~ 490 (536)
- ++.+.+++.+.+.+.+.
T Consensus 142 ~-~~~~~~~~l~~l~~~~~ 159 (161)
T 2f62_A 142 E-VFDSFESAFKYFLANFP 159 (161)
T ss_dssp C-EESSHHHHHHHHHHHSC
T ss_pred e-eeCCHHHHHHHHHHhhc
Confidence 3 45678888777776654
No 72
>3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A
Probab=76.38 E-value=2.7 Score=39.15 Aligned_cols=30 Identities=20% Similarity=0.137 Sum_probs=22.6
Q ss_pred CceEEEEe-CCCCchHHHHHHHHHHHHHhcc
Q 036427 144 PKKVLILM-SDTGGGHRASAEAIKAAFHEKF 173 (536)
Q Consensus 144 ~mKIL~~~-~~~GgGh~~~~l~La~~L~~~~ 173 (536)
|||||++. ..+||-..++...+++.|.+..
T Consensus 2 m~~VLvTGF~PF~~~~~NPS~~~v~~L~~~i 32 (223)
T 3ro0_A 2 EKKVLLTGFDPFGGETVNPSWEAVKRLNGAA 32 (223)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHHTTTCE
T ss_pred CCEEEEEeCCCCCCCCCChHHHHHHHhcccc
Confidence 67999886 4576556788888888887653
No 73
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=75.44 E-value=7.7 Score=34.16 Aligned_cols=34 Identities=21% Similarity=0.185 Sum_probs=27.9
Q ss_pred HHHHhhcCeEEECC---ChHHHHH---HHHhCCcEEEecc
Q 036427 421 EEAMGACDCIITKA---GPGTIAE---AMIRGLPIILNDF 454 (536)
Q Consensus 421 ~~ll~~aDv~V~~s---G~~tllE---Ama~GlPVI~~~~ 454 (536)
.+++..||++|.-- ..+|.+| |.+.|+|||+...
T Consensus 72 ~~~i~~aD~vva~~~~~d~Gt~~EiGyA~algKPVi~l~~ 111 (165)
T 2khz_A 72 LNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFR 111 (165)
T ss_dssp HHHHHHCSEEEEECSSCCHHHHHHHHHHHHTCSSEEEEEC
T ss_pred HHHHHhCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEc
Confidence 37899999987753 3789999 8999999999854
No 74
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=74.60 E-value=24 Score=32.83 Aligned_cols=41 Identities=20% Similarity=0.129 Sum_probs=25.3
Q ss_pred CCCCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEE-EEee
Q 036427 138 GIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQV-FVTD 183 (536)
Q Consensus 138 ~~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV-~v~~ 183 (536)
.....+||||+|+.+|+| + -+.++.+++.+.. .+++| .|++
T Consensus 16 ~~~~~~~~rI~~l~SG~g--~--~~~~~l~~l~~~~-~~~~I~~Vvt 57 (229)
T 3auf_A 16 LYFQGHMIRIGVLISGSG--T--NLQAILDGCREGR-IPGRVAVVIS 57 (229)
T ss_dssp SSCBTTCEEEEEEESSCC--H--HHHHHHHHHHTTS-SSEEEEEEEE
T ss_pred ccccCCCcEEEEEEeCCc--H--HHHHHHHHHHhCC-CCCeEEEEEc
Confidence 334455689999999983 3 3556677777641 13565 3444
No 75
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=74.22 E-value=51 Score=29.85 Aligned_cols=38 Identities=32% Similarity=0.410 Sum_probs=27.4
Q ss_pred hhHHHHHhhcCeEEE-CCChHHHHH---HHHh------CCcEEEeccC
Q 036427 418 SKMEEAMGACDCIIT-KAGPGTIAE---AMIR------GLPIILNDFI 455 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~-~sG~~tllE---Ama~------GlPVI~~~~~ 455 (536)
..-..++..||++|. |+|.+|+-| ++.+ ++|||..+..
T Consensus 109 ~Rk~~m~~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~~ 156 (199)
T 3qua_A 109 ERKREMEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDPF 156 (199)
T ss_dssp HHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTT
T ss_pred HHHHHHHHhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcCC
Confidence 455667789998766 445788766 4553 8999999863
No 76
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=72.95 E-value=34 Score=27.22 Aligned_cols=33 Identities=21% Similarity=0.168 Sum_probs=21.0
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
|.++|||++-.+. .....+.+.|.+. |++|..+
T Consensus 1 M~~~~ilivdd~~-----~~~~~l~~~L~~~---g~~v~~~ 33 (127)
T 3i42_A 1 MSLQQALIVEDYQ-----AAAETFKELLEML---GFQADYV 33 (127)
T ss_dssp -CCEEEEEECSCH-----HHHHHHHHHHHHT---TEEEEEE
T ss_pred CCcceEEEEcCCH-----HHHHHHHHHHHHc---CCCEEEE
Confidence 3467888886654 4455567777776 6766554
No 77
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=69.94 E-value=7.1 Score=34.99 Aligned_cols=39 Identities=18% Similarity=0.151 Sum_probs=29.7
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
+||||+++..+ .|-....+..+++.+.+. |++|.+.+..
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l~~~---g~~v~~~~l~ 41 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGAEEA---GAEVKIRRVR 41 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHHHHH---SCEEEEEECC
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHHHhC---CCEEEEEehh
Confidence 46899998766 456667777888888887 7788877763
No 78
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=68.96 E-value=7.6 Score=34.73 Aligned_cols=42 Identities=14% Similarity=0.176 Sum_probs=29.7
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|+||||+++..+..|-....+..+++.+.+. +++|.+.+...
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~---g~~v~~~~l~~ 44 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQG---GFEARVRTVPA 44 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHT---TCEEEEEBCCC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhC---CCEEEEEEhhh
Confidence 4567999998665455566777888888876 77888877643
No 79
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=68.94 E-value=55 Score=31.68 Aligned_cols=39 Identities=10% Similarity=0.022 Sum_probs=23.8
Q ss_pred CCceEEEEeCCCCc--hHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 143 QPKKVLILMSDTGG--GHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 143 ~~mKIL~~~~~~Gg--Gh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
..++|.++..+... -.......+.+++.+. |+++.+.+.
T Consensus 2 ~~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~---g~~~~~~~~ 42 (350)
T 3h75_A 2 SLTSVVFLNPGNSTETFWVSYSQFMQAAARDL---GLDLRILYA 42 (350)
T ss_dssp -CCEEEEEECSCTTCHHHHHHHHHHHHHHHHH---TCEEEEEEC
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHHHHHHc---CCeEEEEEC
Confidence 45789999887632 2233444555666666 788877643
No 80
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=67.08 E-value=16 Score=29.03 Aligned_cols=33 Identities=33% Similarity=0.462 Sum_probs=19.8
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
|+++||+++-.+. .....+...|.+. |++|..+
T Consensus 3 mm~~~ilivdd~~-----~~~~~l~~~L~~~---g~~v~~~ 35 (127)
T 2gkg_A 3 HMSKKILIVESDT-----ALSATLRSALEGR---GFTVDET 35 (127)
T ss_dssp ---CEEEEECSCH-----HHHHHHHHHHHHH---TCEEEEE
T ss_pred CCCCeEEEEeCCH-----HHHHHHHHHHHhc---CceEEEe
Confidence 3446888886664 4455567777776 6776544
No 81
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=66.78 E-value=47 Score=30.48 Aligned_cols=71 Identities=20% Similarity=0.219 Sum_probs=40.4
Q ss_pred hHHHHHhhcCeEEE-CCChHHHHH---HHHh------CCcEEEeccCC-ccccC-ChhhHhhCCc--------eeecCCH
Q 036427 419 KMEEAMGACDCIIT-KAGPGTIAE---AMIR------GLPIILNDFIA-GQEAG-NVPYVVENGC--------GKFSKSP 478 (536)
Q Consensus 419 ~l~~ll~~aDv~V~-~sG~~tllE---Ama~------GlPVI~~~~~~-~~e~~-na~~lv~~g~--------g~~~~d~ 478 (536)
.-.-+...||.+|. |+|.+|+-| ++.+ ++||++.+..+ ..... -.+.+++.|. -.+++|+
T Consensus 102 Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~g~w~~l~~~l~~~~~~Gfi~~~~~~~~~~~d~~ 181 (215)
T 2a33_A 102 RKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTA 181 (215)
T ss_dssp HHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECGGGTTHHHHHHHHHHHHHTSSCHHHHTTEEEESSH
T ss_pred HHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecCcchhHHHHHHHHHHHHcCCCCHHHCCeEEEeCCH
Confidence 34556778998665 556778765 4454 89999998642 11100 0112233331 1345688
Q ss_pred HHHHHHHHHHh
Q 036427 479 KEIANMVSQWF 489 (536)
Q Consensus 479 ~~La~~I~~ll 489 (536)
+++.+.|....
T Consensus 182 ee~~~~l~~~~ 192 (215)
T 2a33_A 182 KELVKKLEEYA 192 (215)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHHHhc
Confidence 88888887654
No 82
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=66.61 E-value=37 Score=32.70 Aligned_cols=20 Identities=15% Similarity=0.242 Sum_probs=17.0
Q ss_pred HHHHHHHHhhCCCEEEEcCc
Q 036427 236 REVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~ 255 (536)
.++.+.|++++||+|++.+.
T Consensus 155 ~~~~~~l~~~~~Dlivlagy 174 (287)
T 3nrb_A 155 SQIKNIVTQSQADLIVLARY 174 (287)
T ss_dssp HHHHHHHHHHTCSEEEESSC
T ss_pred HHHHHHHHHhCCCEEEhhhh
Confidence 46778899999999998764
No 83
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=66.51 E-value=59 Score=29.13 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=27.6
Q ss_pred hhHHHHHhhcCeEEE-CCChHHHHHHHH---------hCCcEEEeccC
Q 036427 418 SKMEEAMGACDCIIT-KAGPGTIAEAMI---------RGLPIILNDFI 455 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~-~sG~~tllEAma---------~GlPVI~~~~~ 455 (536)
..-..++..||++|. |+|.+|+-|.+- .++|||..+..
T Consensus 100 ~Rk~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~~ 147 (189)
T 3sbx_A 100 ERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPW 147 (189)
T ss_dssp HHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTT
T ss_pred HHHHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecCC
Confidence 455677889998766 456788877442 38999999863
No 84
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=65.50 E-value=26 Score=28.56 Aligned_cols=34 Identities=12% Similarity=0.155 Sum_probs=20.8
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
++.++|||++-.+. .....+...|.+. |++|..+
T Consensus 3 ~~~~~~iLivdd~~-----~~~~~l~~~l~~~---g~~v~~~ 36 (140)
T 3grc_A 3 LAPRPRILICEDDP-----DIARLLNLMLEKG---GFDSDMV 36 (140)
T ss_dssp --CCSEEEEECSCH-----HHHHHHHHHHHHT---TCEEEEE
T ss_pred CCCCCCEEEEcCCH-----HHHHHHHHHHHHC---CCeEEEE
Confidence 44567898887664 4445566777776 6666443
No 85
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=65.33 E-value=29 Score=31.92 Aligned_cols=73 Identities=16% Similarity=0.172 Sum_probs=43.7
Q ss_pred hhHHHHHhhcCeEEE-CCChHHHHHHH---------HhCCcEEEeccCC-cccc-CChhhHhhCCc--------eeecCC
Q 036427 418 SKMEEAMGACDCIIT-KAGPGTIAEAM---------IRGLPIILNDFIA-GQEA-GNVPYVVENGC--------GKFSKS 477 (536)
Q Consensus 418 ~~l~~ll~~aDv~V~-~sG~~tllEAm---------a~GlPVI~~~~~~-~~e~-~na~~lv~~g~--------g~~~~d 477 (536)
..-..++..||++|. |+|.+|+-|.+ ..++|||+.+..+ .... .-.+.+++.|. -.+++|
T Consensus 97 ~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~~~~~~~~~~d~ 176 (216)
T 1ydh_A 97 ERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPT 176 (216)
T ss_dssp HHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTSSCHHHHTTEEEESS
T ss_pred HHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCChHHcCeEEEeCC
Confidence 445667788998665 55678877654 2589999998532 1110 00122344432 234568
Q ss_pred HHHHHHHHHHHhC
Q 036427 478 PKEIANMVSQWFG 490 (536)
Q Consensus 478 ~~~La~~I~~ll~ 490 (536)
++++.+.|.....
T Consensus 177 ~ee~~~~l~~~~~ 189 (216)
T 1ydh_A 177 AKELMEKMEEYTP 189 (216)
T ss_dssp HHHHHHHHHHCC-
T ss_pred HHHHHHHHHHhcc
Confidence 9999888876543
No 86
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=64.64 E-value=44 Score=31.18 Aligned_cols=23 Identities=22% Similarity=0.371 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhhCCCEEEEcCc
Q 036427 233 FIAREVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 233 ~~~~~l~~~l~~~kPDvVi~~~~ 255 (536)
.....+.++|++++||+|+++.+
T Consensus 84 ~~~~~l~~~ir~~~PdvV~t~~~ 106 (242)
T 2ixd_A 84 EYIREIVKVIRTYKPKLVFAPYY 106 (242)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECS
T ss_pred HHHHHHHHHHHHcCCCEEEECCC
Confidence 34578889999999999998754
No 87
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=64.03 E-value=29 Score=32.11 Aligned_cols=34 Identities=15% Similarity=0.300 Sum_probs=19.2
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
.|.++|||++-.+. .....|...|.+. ++.|..+
T Consensus 34 ~m~~~~ILivdd~~-----~~~~~l~~~L~~~---g~~v~~~ 67 (249)
T 3q9s_A 34 RMNEQRILVIEDDH-----DIANVLRMDLTDA---GYVVDHA 67 (249)
T ss_dssp ---CCEEEEECSCH-----HHHHHHHHHHHTT---TCEEEEE
T ss_pred CCCCCEEEEEECCH-----HHHHHHHHHHHHC---CCEEEEe
Confidence 34557898886654 3445566777665 5555443
No 88
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=64.01 E-value=50 Score=27.57 Aligned_cols=40 Identities=28% Similarity=0.306 Sum_probs=23.2
Q ss_pred HHHHhhCCCEEEEcC--cccchHHH-HHHHHcCCCCCceEEEE
Q 036427 240 KGLMKYQPDIIISVH--PLMQHVPL-RILRAKGLLKKIVFTTV 279 (536)
Q Consensus 240 ~~l~~~kPDvVi~~~--~~~~~i~~-~~~~~~g~~~~ip~v~~ 279 (536)
+.+++.+||+|+++. |-+.++-+ ...+.......+|++.+
T Consensus 51 ~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~l 93 (134)
T 3to5_A 51 PMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMI 93 (134)
T ss_dssp HHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEE
T ss_pred HHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEE
Confidence 346678999999976 55565522 22343333345776544
No 89
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=63.92 E-value=29 Score=31.88 Aligned_cols=20 Identities=15% Similarity=0.124 Sum_probs=16.6
Q ss_pred HHHHHHHHhhCCCEEEEcCc
Q 036427 236 REVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~ 255 (536)
..+.+.|++++||+|++.+.
T Consensus 70 ~~~~~~l~~~~~Dliv~a~y 89 (216)
T 2ywr_A 70 ERMALELKKKGVELVVLAGF 89 (216)
T ss_dssp HHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHhcCCCEEEEeCc
Confidence 46678899999999998764
No 90
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=63.80 E-value=47 Score=26.41 Aligned_cols=35 Identities=11% Similarity=0.130 Sum_probs=22.9
Q ss_pred CCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 140 ENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 140 ~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
..++++|||++-.+. .....+.+.|.+. |+++..+
T Consensus 3 ~~~~~~~ilivdd~~-----~~~~~l~~~L~~~---g~~v~~~ 37 (130)
T 3eod_A 3 QPLVGKQILIVEDEQ-----VFRSLLDSWFSSL---GATTVLA 37 (130)
T ss_dssp CTTTTCEEEEECSCH-----HHHHHHHHHHHHT---TCEEEEE
T ss_pred CCCCCCeEEEEeCCH-----HHHHHHHHHHHhC---CceEEEe
Confidence 345667999887664 4455567777776 6666543
No 91
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=63.49 E-value=44 Score=26.32 Aligned_cols=16 Identities=25% Similarity=0.287 Sum_probs=12.1
Q ss_pred HHHHhhCCCEEEEcCc
Q 036427 240 KGLMKYQPDIIISVHP 255 (536)
Q Consensus 240 ~~l~~~kPDvVi~~~~ 255 (536)
+.+++.+||+|+++..
T Consensus 40 ~~~~~~~~dlii~D~~ 55 (120)
T 3f6p_A 40 EMVEELQPDLILLDIM 55 (120)
T ss_dssp HHHHTTCCSEEEEETT
T ss_pred HHHhhCCCCEEEEeCC
Confidence 4466788999998763
No 92
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=63.19 E-value=43 Score=27.89 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=20.6
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
.+++|||++-.+. .....+.+.|.+. |++|..+
T Consensus 5 ~~~~~ILivdd~~-----~~~~~l~~~L~~~---g~~v~~~ 37 (154)
T 3gt7_A 5 NRAGEILIVEDSP-----TQAEHLKHILEET---GYQTEHV 37 (154)
T ss_dssp --CCEEEEECSCH-----HHHHHHHHHHHTT---TCEEEEE
T ss_pred cCCCcEEEEeCCH-----HHHHHHHHHHHHC---CCEEEEe
Confidence 3457888887664 4555567777776 6666544
No 93
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=62.99 E-value=75 Score=32.55 Aligned_cols=78 Identities=15% Similarity=0.218 Sum_probs=43.9
Q ss_pred EecCh-hhHHHHHhhcCeEEE-CCChHHHHH---HHH---------hCCcEEEeccC--CccccCChhhHh----h--CC
Q 036427 413 VKGFV-SKMEEAMGACDCIIT-KAGPGTIAE---AMI---------RGLPIILNDFI--AGQEAGNVPYVV----E--NG 470 (536)
Q Consensus 413 ~~G~v-~~l~~ll~~aDv~V~-~sG~~tllE---Ama---------~GlPVI~~~~~--~~~e~~na~~lv----~--~g 470 (536)
.++.. .....++..||++|. |+|.+|+-| ++. .++|||..+.. .+....-...+. + ..
T Consensus 231 iv~~m~eRK~~mv~~SDAfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg~~n~~gywd~Ll~~l~~~l~~~~~~ 310 (460)
T 3bq9_A 231 ILPDIEKRLEAFVRCAHGIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILTGPASSRDYFEALDEFIGATIGDEARQ 310 (460)
T ss_dssp ECSSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHHHHHHHHHTCTTGGG
T ss_pred EECCHHHHHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEEecCCccchhhHHHHHHHHHhcchhhc
Confidence 33443 455677789998665 556788766 445 37999999621 111100011111 1 11
Q ss_pred -ceeecCCHHHHHHHHHHHhC
Q 036427 471 -CGKFSKSPKEIANMVSQWFG 490 (536)
Q Consensus 471 -~g~~~~d~~~La~~I~~ll~ 490 (536)
.-.+++|++++.+.+...+.
T Consensus 311 ~~iiv~ddpeEal~~l~~~~~ 331 (460)
T 3bq9_A 311 LYKIIIDDPAAVAQHMHAGMA 331 (460)
T ss_dssp GCEEEESCHHHHHHHHHHHHH
T ss_pred CcEEEeCCHHHHHHHHHHHHH
Confidence 12345799999988876554
No 94
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=62.83 E-value=37 Score=28.21 Aligned_cols=38 Identities=11% Similarity=0.180 Sum_probs=24.4
Q ss_pred CCCCCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 137 NGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 137 ~~~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
....+.+++|||++-.+. .....|...|.+. |++|..+
T Consensus 7 ~~~~~~~~~~ILivdd~~-----~~~~~l~~~L~~~---g~~v~~~ 44 (153)
T 3hv2_A 7 NVATVTRRPEILLVDSQE-----VILQRLQQLLSPL---PYTLHFA 44 (153)
T ss_dssp CCCCCCSCCEEEEECSCH-----HHHHHHHHHHTTS---SCEEEEE
T ss_pred chhhccCCceEEEECCCH-----HHHHHHHHHhccc---CcEEEEE
Confidence 334456678999887664 4455567777776 6666544
No 95
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=62.40 E-value=13 Score=33.67 Aligned_cols=42 Identities=19% Similarity=0.159 Sum_probs=30.9
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
+.||||+++..+..|-....+..+++.+.+. |++|.+.+...
T Consensus 4 ~~mmkilii~~S~~g~T~~la~~i~~~l~~~---g~~v~~~~l~~ 45 (211)
T 1ydg_A 4 TAPVKLAIVFYSSTGTGYAMAQEAAEAGRAA---GAEVRLLKVRE 45 (211)
T ss_dssp -CCCEEEEEECCSSSHHHHHHHHHHHHHHHT---TCEEEEEECCC
T ss_pred CCCCeEEEEEECCCChHHHHHHHHHHHHhcC---CCEEEEEeccc
Confidence 4568999998766455667777888888886 77888877643
No 96
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=61.69 E-value=23 Score=28.94 Aligned_cols=34 Identities=15% Similarity=0.334 Sum_probs=21.4
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
+++++|||++-.+. .....|...|.+. |++|..+
T Consensus 4 ~~~~~~iLivdd~~-----~~~~~l~~~L~~~---g~~v~~~ 37 (142)
T 3cg4_A 4 AEHKGDVMIVDDDA-----HVRIAVKTILSDA---GFHIISA 37 (142)
T ss_dssp --CCCEEEEECSCH-----HHHHHHHHHHHHT---TCEEEEE
T ss_pred CCCCCeEEEEcCCH-----HHHHHHHHHHHHC---CeEEEEe
Confidence 45567898887664 4555677777776 6666543
No 97
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=61.04 E-value=12 Score=31.64 Aligned_cols=39 Identities=18% Similarity=0.231 Sum_probs=29.2
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
||||+|+..+..|.....+..+++.+.+. |++|.+.+..
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~~---g~~v~~~~~~ 39 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAAG---GHEVTLLNAA 39 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHTT---TCEEEEEETT
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhC---CCeEEEEehh
Confidence 47999886554356778888899999887 7788887653
No 98
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=60.53 E-value=52 Score=30.02 Aligned_cols=20 Identities=25% Similarity=0.255 Sum_probs=17.1
Q ss_pred HHHHHHHHhhCCCEEEEcCc
Q 036427 236 REVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~ 255 (536)
..+.+.|++++||+|++.+.
T Consensus 76 ~~~~~~l~~~~~Dliv~agy 95 (209)
T 4ds3_A 76 DAILAALDVLKPDIICLAGY 95 (209)
T ss_dssp HHHHHHHHHHCCSEEEESSC
T ss_pred HHHHHHHHhcCCCEEEEecc
Confidence 57778899999999998764
No 99
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=60.40 E-value=26 Score=28.83 Aligned_cols=33 Identities=6% Similarity=0.190 Sum_probs=19.3
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
++++|||++-.+. .....+...|.+. |++|..+
T Consensus 6 ~~~~~iLivd~~~-----~~~~~l~~~L~~~---g~~v~~~ 38 (147)
T 2zay_A 6 GKWWRIMLVDTQL-----PALAASISALSQE---GFDIIQC 38 (147)
T ss_dssp --CEEEEEECTTG-----GGGHHHHHHHHHH---TEEEEEE
T ss_pred CCCceEEEEeCCH-----HHHHHHHHHHHHc---CCeEEEe
Confidence 4567888887664 3334456666666 6766644
No 100
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=60.38 E-value=44 Score=30.76 Aligned_cols=23 Identities=13% Similarity=0.244 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhhCCCEEEEcCc
Q 036427 233 FIAREVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 233 ~~~~~l~~~l~~~kPDvVi~~~~ 255 (536)
.....+.++|++++||+|+++.+
T Consensus 82 ~~~~~l~~~ir~~~P~~V~t~~~ 104 (227)
T 1uan_A 82 EQRLKLAQALRRLRPRVVFAPLE 104 (227)
T ss_dssp HHHHHHHHHHHHHCEEEEEEECS
T ss_pred HHHHHHHHHHHHhCCCEEEeCCC
Confidence 34568889999999999998764
No 101
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=60.11 E-value=9 Score=35.39 Aligned_cols=30 Identities=3% Similarity=0.001 Sum_probs=20.9
Q ss_pred CCceEEEEe-CCCCchHHHHHHHHHHHHHhc
Q 036427 143 QPKKVLILM-SDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 143 ~~mKIL~~~-~~~GgGh~~~~l~La~~L~~~ 172 (536)
+.||||++. ..+|+-...+...+++.|.+.
T Consensus 2 ~~m~VLvTGF~PF~~~~~NPS~~~v~~L~~~ 32 (215)
T 3giu_A 2 NAMHILVTGFAPFDNQNINPSWEAVTQLEDI 32 (215)
T ss_dssp --CEEEEEEECCCTTCSCCHHHHHHHHSCSE
T ss_pred CCcEEEEEecCCCCCCCCChHHHHHHHhccc
Confidence 457998886 457555678888888888765
No 102
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=59.26 E-value=38 Score=27.52 Aligned_cols=33 Identities=15% Similarity=0.254 Sum_probs=20.9
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
.+++|||++-.+. .....+...|.+. |++|..+
T Consensus 2 ~~~~~iLivdd~~-----~~~~~l~~~L~~~---g~~v~~~ 34 (142)
T 2qxy_A 2 SLTPTVMVVDESR-----ITFLAVKNALEKD---GFNVIWA 34 (142)
T ss_dssp -CCCEEEEECSCH-----HHHHHHHHHHGGG---TCEEEEE
T ss_pred CCCCeEEEEeCCH-----HHHHHHHHHHHhC---CCEEEEE
Confidence 3567888886663 4455567777776 6676543
No 103
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=58.29 E-value=1.2e+02 Score=28.16 Aligned_cols=40 Identities=18% Similarity=0.292 Sum_probs=24.0
Q ss_pred CCCceEEEEeCCCCchH-HHHHHHHHHHHHhccCCceEEEEeec
Q 036427 142 DQPKKVLILMSDTGGGH-RASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh-~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.+..+|.++..+..... ......+.+++.+. |+++.+.+.
T Consensus 6 ~~~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~---g~~~~~~~~ 46 (291)
T 3egc_A 6 KRSNVVGLIVSDIENVFFAEVASGVESEARHK---GYSVLLANT 46 (291)
T ss_dssp -CCCEEEEEESCTTSHHHHHHHHHHHHHHHHT---TCEEEEEEC
T ss_pred CCCcEEEEEECCCcchHHHHHHHHHHHHHHHC---CCEEEEEeC
Confidence 45578999987753322 23334455566665 788877654
No 104
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=57.45 E-value=34 Score=31.40 Aligned_cols=21 Identities=14% Similarity=0.271 Sum_probs=17.1
Q ss_pred HHHHHHHHHhhCCCEEEEcCc
Q 036427 235 AREVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 235 ~~~l~~~l~~~kPDvVi~~~~ 255 (536)
...+.+.+++++||+|++.+.
T Consensus 78 d~~~~~~l~~~~~Dlivlagy 98 (215)
T 3da8_A 78 DVAITAATAAHEPDLVVSAGF 98 (215)
T ss_dssp HHHHHHHHHTTCCSEEEEEEC
T ss_pred hHHHHHHHHhhCCCEEEEcCc
Confidence 356778899999999998653
No 105
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=57.41 E-value=49 Score=26.34 Aligned_cols=33 Identities=30% Similarity=0.487 Sum_probs=19.2
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
..++|||++-.+. .....+.+.|.+. +++|..+
T Consensus 4 ~~~~~ilivdd~~-----~~~~~l~~~L~~~---g~~v~~~ 36 (132)
T 3lte_A 4 KQSKRILVVDDDQ-----AMAAAIERVLKRD---HWQVEIA 36 (132)
T ss_dssp ---CEEEEECSCH-----HHHHHHHHHHHHT---TCEEEEE
T ss_pred CCCccEEEEECCH-----HHHHHHHHHHHHC---CcEEEEe
Confidence 4457888887654 3444566777765 6666544
No 106
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=56.52 E-value=1.3e+02 Score=28.07 Aligned_cols=38 Identities=8% Similarity=0.073 Sum_probs=22.0
Q ss_pred CCCceEEEEeCCCCchH-HHHHHHHHHHHHhccCCceEEEEe
Q 036427 142 DQPKKVLILMSDTGGGH-RASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh-~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
.+.+||.++..+..... ......+.+++.+. |+++.+.
T Consensus 2 s~~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~---g~~~~~~ 40 (305)
T 3g1w_A 2 SLNETYMMITFQSGMDYWKRCLKGFEDAAQAL---NVTVEYR 40 (305)
T ss_dssp ---CEEEEEESSTTSTHHHHHHHHHHHHHHHH---TCEEEEE
T ss_pred CCCceEEEEEccCCChHHHHHHHHHHHHHHHc---CCEEEEe
Confidence 34578999987654332 33334555666666 7888763
No 107
>3lac_A Pyrrolidone-carboxylate peptidase; alpha beta class, three layer sandwich, hydrolase, protease, thiol protease, structural genomics; 2.00A {Bacillus anthracis}
Probab=55.86 E-value=11 Score=34.89 Aligned_cols=29 Identities=31% Similarity=0.347 Sum_probs=20.5
Q ss_pred CceEEEEe-CCCCchHHHHHHHHHHHHHhc
Q 036427 144 PKKVLILM-SDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 144 ~mKIL~~~-~~~GgGh~~~~l~La~~L~~~ 172 (536)
|||||++. ..+|+-..++...+++.|.+.
T Consensus 1 m~~VLvTGF~PF~~~~~NPS~~~v~~L~~~ 30 (215)
T 3lac_A 1 MKTVLLTGFDPFGGESINPAWEVAKSLHEK 30 (215)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHTTTTC
T ss_pred CCEEEEEecCCCCCCCCChHHHHHHHhccc
Confidence 57888886 457555567888888877664
No 108
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=55.84 E-value=27 Score=28.25 Aligned_cols=33 Identities=21% Similarity=0.358 Sum_probs=20.7
Q ss_pred CCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEE
Q 036427 140 ENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVF 180 (536)
Q Consensus 140 ~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~ 180 (536)
.+..++|||++-.+. .....|...|.+. |++|.
T Consensus 5 ~~~~~~~iLivdd~~-----~~~~~l~~~L~~~---g~~v~ 37 (140)
T 3cg0_A 5 ASDDLPGVLIVEDGR-----LAAATLRIQLESL---GYDVL 37 (140)
T ss_dssp ---CCCEEEEECCBH-----HHHHHHHHHHHHH---TCEEE
T ss_pred cCCCCceEEEEECCH-----HHHHHHHHHHHHC---CCeeE
Confidence 345668999887664 4455567777776 67765
No 109
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=55.48 E-value=43 Score=27.14 Aligned_cols=26 Identities=19% Similarity=0.396 Sum_probs=15.9
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~ 172 (536)
++++|||++-.+. .....+.+.|.+.
T Consensus 5 ~~~~~ILivdd~~-----~~~~~l~~~L~~~ 30 (143)
T 2qvg_A 5 ADKVDILYLEDDE-----VDIQSVERVFHKI 30 (143)
T ss_dssp --CCSEEEECCCH-----HHHHHHHHHHHHH
T ss_pred cCCCeEEEEeCCH-----HHHHHHHHHHHHh
Confidence 4557888887664 4445566777766
No 110
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=54.59 E-value=43 Score=26.88 Aligned_cols=67 Identities=15% Similarity=0.326 Sum_probs=38.5
Q ss_pred cEEEEEecCCH-------HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCC-hH--HHHHHH--HhCCcEEEec
Q 036427 386 GQVLVICGRNK-------KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAG-PG--TIAEAM--IRGLPIILND 453 (536)
Q Consensus 386 ~~~lvi~G~~~-------~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG-~~--tllEAm--a~GlPVI~~~ 453 (536)
.+++++||.|- .+++.+++.++...|...+. .++...+..+|++++..- .. .-++.. -.++||+.++
T Consensus 5 mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~~~-~~~~~~~~~~D~Ii~t~~l~~~~~~~~~~~~~~~~pv~~I~ 83 (109)
T 2l2q_A 5 MNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAIAE-TRLSEVVDRFDVVLLAPQSRFNKKRLEEITKPKGIPIEIIN 83 (109)
T ss_dssp EEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEECS-TTHHHHTTTCSEEEECSCCSSHHHHHHHHHHHHTCCEEECC
T ss_pred eEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEecH-HHHHhhcCCCCEEEECCccHHHHHHHHHHhcccCCCEEEEC
Confidence 45667776652 34444555454333444443 356666788999998763 21 112222 3699999977
No 111
>1x10_A Pyrrolidone-carboxylate peptidase; stability of protein, hydrolase; 2.00A {Pyrococcus furiosus} PDB: 1z8t_A 1z8x_A 1ioi_A 1x12_A 1z8w_A 2eo8_A 1iof_A 2df5_A
Probab=54.44 E-value=17 Score=33.36 Aligned_cols=28 Identities=25% Similarity=0.258 Sum_probs=21.3
Q ss_pred ceEEEEe-CCCCchHHHHHHHHHHHHHhc
Q 036427 145 KKVLILM-SDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 145 mKIL~~~-~~~GgGh~~~~l~La~~L~~~ 172 (536)
||||++. ..+||=...+...+++.|.+.
T Consensus 1 m~VLvTGF~PF~~~~~NPS~~~v~~L~~~ 29 (208)
T 1x10_A 1 MKVLVTGFEPFGGEKINPTERIAKDLDGI 29 (208)
T ss_dssp CEEEEEEECCCTTCSCCHHHHHHHHHTTC
T ss_pred CEEEEEeecCCCCCCCChHHHHHHHhhcc
Confidence 6888876 457666678888888988876
No 112
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=54.35 E-value=21 Score=31.99 Aligned_cols=39 Identities=10% Similarity=0.002 Sum_probs=28.6
Q ss_pred CceEEEEeCCC--CchHHHHHHHHHHH-HHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSDT--GGGHRASAEAIKAA-FHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~~--GgGh~~~~l~La~~-L~~~~g~g~eV~v~~~~ 185 (536)
||||+++.++. +|-....+..+++. +.+. |+++.+.+..
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~---g~~v~~~dl~ 43 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARS---DSQGRHIHVI 43 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHS---SEEEEEEEGG
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHC---CCeEEEEEcc
Confidence 57999987663 34566666777788 8887 7888888763
No 113
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=53.85 E-value=81 Score=24.98 Aligned_cols=101 Identities=16% Similarity=0.069 Sum_probs=0.0
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcc
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPR 220 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~ 220 (536)
|++++|||++-.+. .....+...|. . +++|..++...
T Consensus 1 M~~~~~ilivdd~~-----~~~~~l~~~l~-~---~~~v~~~~~~~---------------------------------- 37 (133)
T 3nhm_A 1 MSLKPKVLIVENSW-----TMRETLRLLLS-G---EFDCTTAADGA---------------------------------- 37 (133)
T ss_dssp ----CEEEEECSCH-----HHHHHHHHHHT-T---TSEEEEESSHH----------------------------------
T ss_pred CCCCCEEEEEcCCH-----HHHHHHHHHHh-C---CcEEEEECCHH----------------------------------
Q ss_pred cccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcC--cccchH-HHHHHHHcCCCCCceEEEEecCCCCcccccccccCCE
Q 036427 221 VIHQSNFAATSTFIAREVAKGLMKYQPDIIISVH--PLMQHV-PLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTR 297 (536)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~--~~~~~i-~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~ 297 (536)
...+.+++.+||+|+++. +...+. .+..++.......+|++.+...........+...++.
T Consensus 38 ----------------~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~ 101 (133)
T 3nhm_A 38 ----------------SGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDA 101 (133)
T ss_dssp ----------------HHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSE
T ss_pred ----------------HHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCce
Q ss_pred EEE
Q 036427 298 CYC 300 (536)
Q Consensus 298 vi~ 300 (536)
++.
T Consensus 102 ~l~ 104 (133)
T 3nhm_A 102 YLV 104 (133)
T ss_dssp EEE
T ss_pred EEe
No 114
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=53.33 E-value=32 Score=33.63 Aligned_cols=19 Identities=21% Similarity=0.321 Sum_probs=15.6
Q ss_pred HHHHHHHhhCCCEEEEcCc
Q 036427 237 EVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~~ 255 (536)
.+.+.+++++||+|++.+.
T Consensus 76 ~~~~~l~~~~~Dliv~~~y 94 (318)
T 3q0i_A 76 ESKQQLAALNADLMVVVAY 94 (318)
T ss_dssp HHHHHHHTTCCSEEEESSC
T ss_pred HHHHHHHhcCCCEEEEeCc
Confidence 5667899999999998764
No 115
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=53.03 E-value=15 Score=35.20 Aligned_cols=40 Identities=23% Similarity=0.227 Sum_probs=30.7
Q ss_pred CceEEEEeC-CCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 144 PKKVLILMS-DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 144 ~mKIL~~~~-~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|+||+.+++ .-|-|-...+..||..|.++ |..|.++|...
T Consensus 3 M~kvI~v~s~KGGvGKTT~a~nLA~~La~~---G~~VlliD~D~ 43 (286)
T 2xj4_A 3 ETRVIVVGNEKGGAGKSTIAVHLVTALLYG---GAKVAVIDLDL 43 (286)
T ss_dssp -CEEEEECCSSSCTTHHHHHHHHHHHHHHT---TCCEEEEECCT
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHC---CCcEEEEECCC
Confidence 556665554 34459999999999999998 88999998754
No 116
>4gxh_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 2.70A {Xenorhabdus bovienii}
Probab=52.74 E-value=12 Score=34.45 Aligned_cols=29 Identities=14% Similarity=0.143 Sum_probs=19.5
Q ss_pred CceEEEEe-CCCCchHHHHHHHHHHHHHhc
Q 036427 144 PKKVLILM-SDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 144 ~mKIL~~~-~~~GgGh~~~~l~La~~L~~~ 172 (536)
|+|||++. ..+||=...+...+++.|...
T Consensus 2 MktVLvTGF~PF~~~~~NPS~~~v~~L~~~ 31 (216)
T 4gxh_A 2 MKTILVTAFDPFGGEAINPSWEAIKPLQGS 31 (216)
T ss_dssp -CEEEEEEECCCTTSSSCHHHHHHGGGTTC
T ss_pred CCEEEEeeccCCCCCCCChhHHHHHhhhcc
Confidence 56788886 457555567888888877643
No 117
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=52.57 E-value=83 Score=24.74 Aligned_cols=82 Identities=21% Similarity=0.332 Sum_probs=0.0
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcccc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRVI 222 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 222 (536)
+++|||++-.+. .....+...|.+. |++|..++...
T Consensus 1 m~~~ILivdd~~-----~~~~~l~~~l~~~---g~~v~~~~~~~------------------------------------ 36 (122)
T 3gl9_A 1 MSKKVLLVDDSA-----VLRKIVSFNLKKE---GYEVIEAENGQ------------------------------------ 36 (122)
T ss_dssp -CCEEEEECSCH-----HHHHHHHHHHHHT---TCEEEEESSHH------------------------------------
T ss_pred CCceEEEEeCCH-----HHHHHHHHHHHHC---CcEEEEeCCHH------------------------------------
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhCCCEEEEcC--cccchH-HHHHHHHcCCCCCceEEEEecC
Q 036427 223 HQSNFAATSTFIAREVAKGLMKYQPDIIISVH--PLMQHV-PLRILRAKGLLKKIVFTTVITD 282 (536)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~--~~~~~i-~~~~~~~~g~~~~ip~v~~~~d 282 (536)
...+.+++.+||+|+.+. |-..++ .+...+.......+|++.+...
T Consensus 37 --------------~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 37 --------------IALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp --------------HHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred --------------HHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
No 118
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=52.15 E-value=75 Score=29.07 Aligned_cols=20 Identities=10% Similarity=0.077 Sum_probs=16.7
Q ss_pred HHHHHHHHhhCCCEEEEcCc
Q 036427 236 REVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~ 255 (536)
..+.+.+++++||+|++.+.
T Consensus 72 ~~~~~~L~~~~~Dlivlagy 91 (215)
T 3kcq_A 72 EHISTVLREHDVDLVCLAGF 91 (215)
T ss_dssp HHHHHHHHHTTCSEEEESSC
T ss_pred HHHHHHHHHhCCCEEEEeCC
Confidence 46778899999999998764
No 119
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=51.86 E-value=31 Score=28.07 Aligned_cols=33 Identities=21% Similarity=0.214 Sum_probs=21.1
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHh-ccCCceEEEEe
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHE-KFGNEYQVFVT 182 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~-~~g~g~eV~v~ 182 (536)
.+++|||++-.+. .....|...|.+ . +++|..+
T Consensus 2 ~~~~~ilivdd~~-----~~~~~l~~~L~~~~---~~~v~~~ 35 (140)
T 3lua_A 2 SLDGTVLLIDYFE-----YEREKTKIIFDNIG---EYDFIEV 35 (140)
T ss_dssp -CCCEEEEECSCH-----HHHHHHHHHHHHHC---CCEEEEE
T ss_pred CCCCeEEEEeCCH-----HHHHHHHHHHHhcc---CccEEEE
Confidence 3567888886664 444556777777 5 6777644
No 120
>4hps_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 1.55A {Xenorhabdus bovienii} PDB: 4gxh_A
Probab=51.81 E-value=16 Score=34.06 Aligned_cols=29 Identities=14% Similarity=0.143 Sum_probs=21.3
Q ss_pred CceEEEEe-CCCCchHHHHHHHHHHHHHhc
Q 036427 144 PKKVLILM-SDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 144 ~mKIL~~~-~~~GgGh~~~~l~La~~L~~~ 172 (536)
|+|||++. ..+||=...+...+++.|.+.
T Consensus 23 mk~VLvTGF~PF~g~~~NPS~~~v~~L~~~ 52 (228)
T 4hps_A 23 MKTILVTAFDPFGGEAINPSWEAIKPLQGS 52 (228)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHGGGTTC
T ss_pred CCEEEEEeccCCCCCCCChHHHHHHHhcCc
Confidence 57898886 457555678888888888764
No 121
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=51.73 E-value=23 Score=34.08 Aligned_cols=44 Identities=20% Similarity=0.193 Sum_probs=27.5
Q ss_pred CCCCceEEEEeCC-CCch-HHHHHHHHHHHHHhccCCceEEEEeecccc
Q 036427 141 NDQPKKVLILMSD-TGGG-HRASAEAIKAAFHEKFGNEYQVFVTDLWSD 187 (536)
Q Consensus 141 ~~~~mKIL~~~~~-~GgG-h~~~~l~La~~L~~~~g~g~eV~v~~~~~~ 187 (536)
.+++|||||+.+. -..+ ...-+...++.|++. |++|.+.|+...
T Consensus 19 ~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~---G~eV~v~DLy~~ 64 (280)
T 4gi5_A 19 YFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQA---GHEVQVSDLYAM 64 (280)
T ss_dssp ---CCEEEEEECCSCTTSHHHHHHHHHHHHHHHT---TCEEEEEETTTT
T ss_pred hhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHC---CCeEEEEEcccc
Confidence 3778999998643 1122 223344667888888 789999988653
No 122
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=51.69 E-value=67 Score=25.97 Aligned_cols=33 Identities=15% Similarity=0.212 Sum_probs=20.3
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
|+++|||++-.+. .....+...|.+. +++|..+
T Consensus 1 M~~~~ilivdd~~-----~~~~~l~~~l~~~---g~~v~~~ 33 (143)
T 3jte_A 1 MSLAKILVIDDES-----TILQNIKFLLEID---GNEVLTA 33 (143)
T ss_dssp --CCEEEEECSCH-----HHHHHHHHHHHHT---TCEEEEE
T ss_pred CCCCEEEEEcCCH-----HHHHHHHHHHHhC---CceEEEe
Confidence 3567888887664 4445566777766 6666544
No 123
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=51.05 E-value=75 Score=26.15 Aligned_cols=34 Identities=9% Similarity=0.152 Sum_probs=22.4
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
.++++|||++-.+. .....+...|.+. |++|..+
T Consensus 4 ~~~~~~iLivdd~~-----~~~~~l~~~L~~~---g~~v~~~ 37 (154)
T 2rjn_A 4 NYKNYTVMLVDDEQ-----PILNSLKRLIKRL---GCNIITF 37 (154)
T ss_dssp CCSCCEEEEECSCH-----HHHHHHHHHHHTT---TCEEEEE
T ss_pred CCCCCeEEEEcCCH-----HHHHHHHHHHHHc---CCeEEEe
Confidence 45668899887664 4455567777766 6776644
No 124
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=50.91 E-value=72 Score=29.23 Aligned_cols=70 Identities=13% Similarity=0.187 Sum_probs=38.8
Q ss_pred hHHHHHhhcCeEEE-CCChHHHHH---HHH-------hCCcEEEeccCCcccc-CChhhHhhCCc--------eeecCCH
Q 036427 419 KMEEAMGACDCIIT-KAGPGTIAE---AMI-------RGLPIILNDFIAGQEA-GNVPYVVENGC--------GKFSKSP 478 (536)
Q Consensus 419 ~l~~ll~~aDv~V~-~sG~~tllE---Ama-------~GlPVI~~~~~~~~e~-~na~~lv~~g~--------g~~~~d~ 478 (536)
.-.-+...||.+|. |+|.+|+-| ++. .++||++.+....... .-.+.+++.|. -.+++|+
T Consensus 124 Rk~~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~~~~w~~l~~~l~~~~~~Gfi~~~~~~~~~~~~~~ 203 (217)
T 1wek_A 124 RKVLFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDRGYWEGLVRWLAFLRDQKAVGPEDLQLFRLTDEP 203 (217)
T ss_dssp HHHHHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECHHHHHHHHHHHHHHHHTTSSCTTGGGGSEEESCH
T ss_pred HHHHHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeCcccchhHHHHHHHHHHCCCCCHHHcCeEEEeCCH
Confidence 34556678898665 556777765 555 3699999874211000 00122343332 1234588
Q ss_pred HHHHHHHHHH
Q 036427 479 KEIANMVSQW 488 (536)
Q Consensus 479 ~~La~~I~~l 488 (536)
+++.+.+.+.
T Consensus 204 ~e~~~~l~~~ 213 (217)
T 1wek_A 204 EEVVQALKAE 213 (217)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHHh
Confidence 8888777654
No 125
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=50.77 E-value=1.5e+02 Score=27.31 Aligned_cols=74 Identities=15% Similarity=0.018 Sum_probs=37.3
Q ss_pred HHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEcCHHH----HHHHHHhCC
Q 036427 239 AKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADV----AKRAMKAGL 314 (536)
Q Consensus 239 ~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~~~----~~~l~~~g~ 314 (536)
.+.+...++|.||........-.+..++..+ +|+|.+-.+.. ....+.|.+-.... .+.+.+.|
T Consensus 59 ~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~----iPvV~i~~~~~-------~~~~~~V~~D~~~~g~~a~~~L~~~G- 126 (288)
T 3gv0_A 59 RYILETGSADGVIISKIEPNDPRVRFMTERN----MPFVTHGRSDM-------GIEHAFHDFDNEAYAYEAVERLAQCG- 126 (288)
T ss_dssp HHHHHHTCCSEEEEESCCTTCHHHHHHHHTT----CCEEEESCCCS-------SCCCEEEEECHHHHHHHHHHHHHHTT-
T ss_pred HHHHHcCCccEEEEecCCCCcHHHHHHhhCC----CCEEEECCcCC-------CCCCcEEEeCcHHHHHHHHHHHHHCC-
Confidence 3446678999888765332221233344444 89887655432 11233444433333 33344444
Q ss_pred CCCCEEEeCCC
Q 036427 315 QASQIKVYGLP 325 (536)
Q Consensus 315 ~~~ki~vignp 325 (536)
..+|-++..+
T Consensus 127 -~~~I~~i~~~ 136 (288)
T 3gv0_A 127 -RKRIAVIVPP 136 (288)
T ss_dssp -CCEEEEECCC
T ss_pred -CCeEEEEcCC
Confidence 3567766543
No 126
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=50.53 E-value=24 Score=31.24 Aligned_cols=39 Identities=23% Similarity=0.182 Sum_probs=28.2
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHh-ccCCceEEEEeecc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHE-KFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~-~~g~g~eV~v~~~~ 185 (536)
||||+++..+..|-....+..+++.+.+ . |++|.+.+..
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~---g~~v~~~~l~ 40 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVD---GAEVVVKRVP 40 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTST---TCEEEEEECC
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcC---CCEEEEEEcc
Confidence 4799998766534556667788888887 6 7788887764
No 127
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=50.38 E-value=83 Score=28.61 Aligned_cols=20 Identities=25% Similarity=0.112 Sum_probs=16.6
Q ss_pred HHHHHHHHhhCCCEEEEcCc
Q 036427 236 REVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~ 255 (536)
..+.+.+++++||+|++.+.
T Consensus 72 ~~~~~~l~~~~~Dliv~a~y 91 (212)
T 3av3_A 72 SEILRELKGRQIDWIALAGY 91 (212)
T ss_dssp HHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHhcCCCEEEEchh
Confidence 46678899999999998764
No 128
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=50.26 E-value=30 Score=30.58 Aligned_cols=39 Identities=18% Similarity=0.219 Sum_probs=29.1
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHh-ccCCceEEEEeecc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHE-KFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~-~~g~g~eV~v~~~~ 185 (536)
||||+++..+..|-....+..+++.+.+ . +++|.+.+..
T Consensus 4 M~kiliiy~S~~GnT~~~a~~i~~~l~~~~---g~~v~~~~l~ 43 (188)
T 2ark_A 4 MGKVLVIYDTRTGNTKKMAELVAEGARSLE---GTEVRLKHVD 43 (188)
T ss_dssp CEEEEEEECCSSSHHHHHHHHHHHHHHTST---TEEEEEEETT
T ss_pred CCEEEEEEECCCcHHHHHHHHHHHHHhhcC---CCeEEEEEhh
Confidence 5799998766535566777788888887 6 7888887753
No 129
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=50.09 E-value=57 Score=29.80 Aligned_cols=21 Identities=24% Similarity=0.199 Sum_probs=17.4
Q ss_pred HHHHHHHHHhhCCCEEEEcCc
Q 036427 235 AREVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 235 ~~~l~~~l~~~kPDvVi~~~~ 255 (536)
...+.+.|++++||+|++.+.
T Consensus 70 d~~~~~~l~~~~~Dliv~agy 90 (211)
T 3p9x_A 70 EIEVVQQLKEKQIDFVVLAGY 90 (211)
T ss_dssp HHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHhcCCCEEEEeCc
Confidence 346778899999999998764
No 130
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=49.88 E-value=69 Score=25.99 Aligned_cols=86 Identities=12% Similarity=0.105 Sum_probs=0.0
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcc
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPR 220 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~ 220 (536)
+++++|||++-.+. .....+...|.+. ++.+.+......
T Consensus 2 ~~~~~~ILivdd~~-----~~~~~l~~~L~~~---~~~~~v~~~~~~--------------------------------- 40 (144)
T 3kht_A 2 SLRSKRVLVVEDNP-----DDIALIRRVLDRK---DIHCQLEFVDNG--------------------------------- 40 (144)
T ss_dssp ---CEEEEEECCCH-----HHHHHHHHHHHHT---TCCEEEEEESSH---------------------------------
T ss_pred CCCCCEEEEEeCCH-----HHHHHHHHHHHhc---CCCeeEEEECCH---------------------------------
Q ss_pred cccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCC---CCCceEEEEecC
Q 036427 221 VIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGL---LKKIVFTTVITD 282 (536)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~---~~~ip~v~~~~d 282 (536)
....+.+++.+||+|+++......-.+-+++.... ...+|++.+...
T Consensus 41 ---------------~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (144)
T 3kht_A 41 ---------------AKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDN 90 (144)
T ss_dssp ---------------HHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETT
T ss_pred ---------------HHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCC
No 131
>1a2z_A Pyrrolidone carboxyl peptidase; N-pyroglutamate hydrolysis; 1.73A {Thermococcus litoralis} SCOP: c.56.4.1
Probab=49.55 E-value=22 Score=32.91 Aligned_cols=28 Identities=39% Similarity=0.503 Sum_probs=21.3
Q ss_pred ceEEEEe-CCCCchHHHHHHHHHHHHHhc
Q 036427 145 KKVLILM-SDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 145 mKIL~~~-~~~GgGh~~~~l~La~~L~~~ 172 (536)
+|||++. ..+||=...+...+++.|.+.
T Consensus 2 k~VLvTGF~PF~~~~~NPS~~~v~~L~~~ 30 (220)
T 1a2z_A 2 KKVLITGFEPFGGDSKNPTEQIAKYFDRK 30 (220)
T ss_dssp EEEEEEEECCCTTCSCCHHHHHHHHHTTC
T ss_pred CEEEEeeccCCCCCCCCcHHHHHHHhhcc
Confidence 4588876 457666778888899999876
No 132
>1f8y_A Nucleoside 2-deoxyribosyltransferase; active site, alpha/beta protein, biocatalyst, X- RAY crystallography; HET: 5MD; 2.40A {Lactobacillus leichmannii} SCOP: c.23.14.1 PDB: 1f8x_A*
Probab=48.87 E-value=15 Score=32.01 Aligned_cols=33 Identities=18% Similarity=0.143 Sum_probs=26.4
Q ss_pred HHHhhcCeEEECC-----ChHHHHH---HHHhCCcEEEecc
Q 036427 422 EAMGACDCIITKA-----GPGTIAE---AMIRGLPIILNDF 454 (536)
Q Consensus 422 ~ll~~aDv~V~~s-----G~~tllE---Ama~GlPVI~~~~ 454 (536)
+.+..||++|.-- -++|..| |.+.|+|||+...
T Consensus 74 ~~i~~aD~vvA~ldg~~~D~GT~~EiGyA~A~gkPVv~~~~ 114 (157)
T 1f8y_A 74 NGIKTNDIMLGVYIPDEEDVGLGMELGYALSQGKYVLLVIP 114 (157)
T ss_dssp HHHHTSSEEEEECCGGGCCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHhCCEEEEEcCCCCCCccHHHHHHHHHHCCCeEEEEEc
Confidence 5679999986542 2689999 9999999999864
No 133
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=48.47 E-value=1.1e+02 Score=24.96 Aligned_cols=87 Identities=17% Similarity=0.054 Sum_probs=0.0
Q ss_pred CCCCCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCc--eEEEEeecccccCCCCCCcchhHHHHHHhhccccceee
Q 036427 137 NGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNE--YQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTY 214 (536)
Q Consensus 137 ~~~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g--~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~ 214 (536)
.......|||||++-.+. .....|...|.+. + +.|..++...
T Consensus 13 ~~~~~~~m~~iLivdd~~-----~~~~~l~~~L~~~---~~~~~v~~~~~~~---------------------------- 56 (150)
T 4e7p_A 13 GLVPRGSHMKVLVAEDQS-----MLRDAMCQLLTLQ---PDVESVLQAKNGQ---------------------------- 56 (150)
T ss_dssp -------CEEEEEECSCH-----HHHHHHHHHHHTS---TTEEEEEEESSHH----------------------------
T ss_pred CCCCCCCccEEEEEcCCH-----HHHHHHHHHHHhC---CCcEEEEEECCHH----------------------------
Q ss_pred cCCCcccccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcC--cccchHHHHHHHHcCCCCCceEEEEecC
Q 036427 215 YGTAPRVIHQSNFAATSTFIAREVAKGLMKYQPDIIISVH--PLMQHVPLRILRAKGLLKKIVFTTVITD 282 (536)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~--~~~~~i~~~~~~~~g~~~~ip~v~~~~d 282 (536)
...+.+++.+||+|+++. +...++-+.-.-+..... +|++.+...
T Consensus 57 ----------------------~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~-~~ii~ls~~ 103 (150)
T 4e7p_A 57 ----------------------EAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLE-TKVVVVTTF 103 (150)
T ss_dssp ----------------------HHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCS-CEEEEEESC
T ss_pred ----------------------HHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCC-CeEEEEeCC
No 134
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=48.45 E-value=57 Score=31.35 Aligned_cols=20 Identities=5% Similarity=0.177 Sum_probs=17.0
Q ss_pred HHHHHHHHhhCCCEEEEcCc
Q 036427 236 REVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~ 255 (536)
.++.+.|++++||+|++.+.
T Consensus 156 ~~~~~~l~~~~~Dlivlagy 175 (288)
T 3obi_A 156 AAITALIAQTHTDLVVLARY 175 (288)
T ss_dssp HHHHHHHHHHTCCEEEESSC
T ss_pred HHHHHHHHhcCCCEEEhhhh
Confidence 46778899999999998764
No 135
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=48.44 E-value=44 Score=32.40 Aligned_cols=20 Identities=20% Similarity=0.252 Sum_probs=17.0
Q ss_pred HHHHHHHHhhCCCEEEEcCc
Q 036427 236 REVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~ 255 (536)
.++.+.+++++||+|++.+.
T Consensus 171 ~~~~~~l~~~~~DliVlagy 190 (302)
T 3o1l_A 171 AEVSRLVGHHQADVVVLARY 190 (302)
T ss_dssp HHHHHHHHHTTCSEEEESSC
T ss_pred HHHHHHHHHhCCCEEEHhHh
Confidence 46778899999999998764
No 136
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=47.49 E-value=69 Score=26.65 Aligned_cols=32 Identities=16% Similarity=0.360 Sum_probs=21.2
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEE
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVF 180 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~ 180 (536)
.++++|||++-.+. .....|...|.+. |++|.
T Consensus 33 ~~~~~~Ilivdd~~-----~~~~~l~~~L~~~---g~~v~ 64 (157)
T 3hzh_A 33 TGIPFNVLIVDDSV-----FTVKQLTQIFTSE---GFNII 64 (157)
T ss_dssp TTEECEEEEECSCH-----HHHHHHHHHHHHT---TCEEE
T ss_pred CCCceEEEEEeCCH-----HHHHHHHHHHHhC---CCeEE
Confidence 34557898887664 4455567777776 67764
No 137
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=47.37 E-value=56 Score=26.19 Aligned_cols=87 Identities=14% Similarity=0.061 Sum_probs=0.0
Q ss_pred CCCCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCC
Q 036427 138 GIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGT 217 (536)
Q Consensus 138 ~~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~ 217 (536)
|-.+.+++|||++-.+. .....+.+.|.+. |++|..++...
T Consensus 1 Ms~~~~~~~ilivdd~~-----~~~~~l~~~L~~~---g~~v~~~~~~~------------------------------- 41 (136)
T 3hdv_A 1 MSLVAARPLVLVVDDNA-----VNREALILYLKSR---GIDAVGADGAE------------------------------- 41 (136)
T ss_dssp ------CCEEEEECSCH-----HHHHHHHHHHHHT---TCCEEEESSHH-------------------------------
T ss_pred CCCCCCCCeEEEECCCH-----HHHHHHHHHHHHc---CceEEEeCCHH-------------------------------
Q ss_pred CcccccchhhhhhhHHHHHHHHHHHHhhC-CCEEEEcCcccchHHHHHHHHcCCC--CCceEEEEecC
Q 036427 218 APRVIHQSNFAATSTFIAREVAKGLMKYQ-PDIIISVHPLMQHVPLRILRAKGLL--KKIVFTTVITD 282 (536)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~k-PDvVi~~~~~~~~i~~~~~~~~g~~--~~ip~v~~~~d 282 (536)
.....+.+.. ||+|+++......-.+-+++..... ..+|++.+...
T Consensus 42 -------------------~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~~s~~ 90 (136)
T 3hdv_A 42 -------------------EARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALSIIVVSGD 90 (136)
T ss_dssp -------------------HHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEEEESS
T ss_pred -------------------HHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEEEeCC
No 138
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=47.13 E-value=31 Score=35.18 Aligned_cols=34 Identities=18% Similarity=0.087 Sum_probs=24.3
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
|+++||||+ |+|. .++.+++++++. |+++++++.
T Consensus 4 m~~~kiLI~----g~g~--~a~~i~~aa~~~---G~~~v~v~~ 37 (446)
T 3ouz_A 4 MEIKSILIA----NRGE--IALRALRTIKEM---GKKAICVYS 37 (446)
T ss_dssp TCCCEEEEC----CCHH--HHHHHHHHHHHT---TCEEEEEEE
T ss_pred cccceEEEE----CCCH--HHHHHHHHHHHc---CCEEEEEEc
Confidence 345688884 2344 567889999998 889887754
No 139
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=47.07 E-value=1.1e+02 Score=29.19 Aligned_cols=20 Identities=15% Similarity=0.232 Sum_probs=17.0
Q ss_pred HHHHHHHHhhCCCEEEEcCc
Q 036427 236 REVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~ 255 (536)
.++.+.+++++||+|++.+.
T Consensus 156 ~~~~~~l~~~~~Dlivla~y 175 (286)
T 3n0v_A 156 RKVLQVIEETGAELVILARY 175 (286)
T ss_dssp HHHHHHHHHHTCSEEEESSC
T ss_pred HHHHHHHHhcCCCEEEeccc
Confidence 46778899999999998764
No 140
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=47.06 E-value=1.1e+02 Score=29.34 Aligned_cols=20 Identities=5% Similarity=0.004 Sum_probs=16.9
Q ss_pred HHHHHHHHhhCCCEEEEcCc
Q 036427 236 REVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~ 255 (536)
.++.+.+++++||+|++.+.
T Consensus 161 ~~~~~~l~~~~~Dlivla~y 180 (292)
T 3lou_A 161 AQWLDVFETSGAELVILARY 180 (292)
T ss_dssp HHHHHHHHHHTCSEEEESSC
T ss_pred HHHHHHHHHhCCCEEEecCc
Confidence 46778899999999998765
No 141
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=46.94 E-value=82 Score=27.12 Aligned_cols=34 Identities=15% Similarity=0.241 Sum_probs=20.1
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
+|+++|||++-.+. .....|...|.+. |++|..+
T Consensus 4 ~m~~~~iLivdd~~-----~~~~~l~~~L~~~---g~~v~~~ 37 (184)
T 3rqi_A 4 SMSDKNFLVIDDNE-----VFAGTLARGLERR---GYAVRQA 37 (184)
T ss_dssp ---CCEEEEECSCH-----HHHHHHHHHHHHT---TCEEEEE
T ss_pred CCCCCeEEEEcCCH-----HHHHHHHHHHHHC---CCEEEEe
Confidence 35567888886654 4455566777776 6666443
No 142
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=46.93 E-value=1e+02 Score=28.17 Aligned_cols=21 Identities=19% Similarity=0.371 Sum_probs=17.4
Q ss_pred HHHHHHHHHhhCCCEEEEcCc
Q 036427 235 AREVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 235 ~~~l~~~l~~~kPDvVi~~~~ 255 (536)
...+.+.|++++||+|++.+.
T Consensus 72 d~~~~~~l~~~~~Dliv~agy 92 (215)
T 3tqr_A 72 ESTLQKTIDHYDPKLIVLAGF 92 (215)
T ss_dssp HHHHHHHHHTTCCSEEEESSC
T ss_pred HHHHHHHHHhcCCCEEEEccc
Confidence 346788899999999998764
No 143
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=46.74 E-value=1.1e+02 Score=27.21 Aligned_cols=34 Identities=12% Similarity=0.251 Sum_probs=19.8
Q ss_pred CCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEE
Q 036427 140 ENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFV 181 (536)
Q Consensus 140 ~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v 181 (536)
.++.+|||+++-.+. .....|...|.+. |++|..
T Consensus 3 ~~~~~~~ilivdd~~-----~~~~~l~~~L~~~---g~~v~~ 36 (233)
T 1ys7_A 3 TGVTSPRVLVVDDDS-----DVLASLERGLRLS---GFEVAT 36 (233)
T ss_dssp ----CCEEEEECSCH-----HHHHHHHHHHHHT---TCEEEE
T ss_pred CCCCCCeEEEEeCCH-----HHHHHHHHHHHhC---CCEEEE
Confidence 345568998887664 4445566777765 666654
No 144
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=46.09 E-value=1.7e+02 Score=26.50 Aligned_cols=35 Identities=14% Similarity=0.153 Sum_probs=21.3
Q ss_pred eEEEEeCCCCc-hHHHHHHHHHHHHHhccCCceEEEEee
Q 036427 146 KVLILMSDTGG-GHRASAEAIKAAFHEKFGNEYQVFVTD 183 (536)
Q Consensus 146 KIL~~~~~~Gg-Gh~~~~l~La~~L~~~~g~g~eV~v~~ 183 (536)
||.++..+... -.......+.+++.+. |+++.+.+
T Consensus 2 ~Ig~i~~~~~~~~~~~~~~gi~~~~~~~---g~~~~~~~ 37 (276)
T 3ksm_A 2 KLLLVLKGDSNAYWRQVYLGAQKAADEA---GVTLLHRS 37 (276)
T ss_dssp EEEEECSCSSSTHHHHHHHHHHHHHHHH---TCEEEECC
T ss_pred eEEEEeCCCCChHHHHHHHHHHHHHHHc---CCEEEEEC
Confidence 68888766432 2333444566666666 77877764
No 145
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=45.93 E-value=81 Score=28.48 Aligned_cols=31 Identities=16% Similarity=0.359 Sum_probs=19.8
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
++|||++-.+. .....|...|.+. |++|..+
T Consensus 5 ~~~ILivdd~~-----~~~~~l~~~L~~~---g~~v~~~ 35 (238)
T 2gwr_A 5 RQRILVVDDDA-----SLAEMLTIVLRGE---GFDTAVI 35 (238)
T ss_dssp CCEEEEECSCH-----HHHHHHHHHHHHT---TCEEEEE
T ss_pred cCeEEEEeCCH-----HHHHHHHHHHHHC---CCEEEEE
Confidence 36888887664 4455566777765 6776544
No 146
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=45.92 E-value=1.1e+02 Score=24.20 Aligned_cols=62 Identities=8% Similarity=0.109 Sum_probs=36.4
Q ss_pred cCeEEECC-----ChHHHHHHHH-----hCCcEEEeccCCccccCChhhHhhCCcee-ecC--CHHHHHHHHHHHhC
Q 036427 427 CDCIITKA-----GPGTIAEAMI-----RGLPIILNDFIAGQEAGNVPYVVENGCGK-FSK--SPKEIANMVSQWFG 490 (536)
Q Consensus 427 aDv~V~~s-----G~~tllEAma-----~GlPVI~~~~~~~~e~~na~~lv~~g~g~-~~~--d~~~La~~I~~ll~ 490 (536)
.|++++-. .+..+++.+. ..+|+|+.-.....+ ......+.|... +.. +.++|.+.|..++.
T Consensus 56 ~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~--~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~ 130 (140)
T 1k68_A 56 PDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSINED--DIFHSYDLHVNCYITKSANLSQLFQIVKGIEE 130 (140)
T ss_dssp CSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCCCHH--HHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred CcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecCCcHH--HHHHHHHhchhheecCCCCHHHHHHHHHHHHH
Confidence 57777642 1455555554 468888876443322 223344556544 333 88889888887764
No 147
>1zgh_A Methionyl-tRNA formyltransferase; southeast collaboratory FO structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum} SCOP: b.46.1.1 c.65.1.1
Probab=45.16 E-value=40 Score=31.91 Aligned_cols=36 Identities=8% Similarity=0.131 Sum_probs=21.5
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEee
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTD 183 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~ 183 (536)
...|+|++++.+. ....+.+.|...++.+|+|.+.+
T Consensus 28 ~~~m~ill~~~~~------~~~~l~q~l~~~l~~~h~V~~~~ 63 (260)
T 1zgh_A 28 AGLMNIIIATTKS------WNIKNAQKFKKENESKYNTTIIT 63 (260)
T ss_dssp --CEEEEEECCSH------HHHHHHHHHHHHTTTTEEEEEEC
T ss_pred cCceEEEEECChH------HHHHHHHHHHHHhcccCceEEEe
Confidence 4558999887653 34445555555444478887664
No 148
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=44.76 E-value=1e+02 Score=23.80 Aligned_cols=15 Identities=13% Similarity=0.071 Sum_probs=11.1
Q ss_pred HHHHhhCCCEEEEcC
Q 036427 240 KGLMKYQPDIIISVH 254 (536)
Q Consensus 240 ~~l~~~kPDvVi~~~ 254 (536)
+.+++.+||+|+++.
T Consensus 40 ~~~~~~~~dlvi~d~ 54 (122)
T 1zgz_A 40 EIMQNQSVDLILLDI 54 (122)
T ss_dssp HHHHHSCCSEEEEES
T ss_pred HHHhcCCCCEEEEeC
Confidence 345667899999865
No 149
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=44.60 E-value=57 Score=32.30 Aligned_cols=34 Identities=18% Similarity=0.318 Sum_probs=24.5
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
++||||++.. | ..+..+++++++. |++|++++..
T Consensus 10 ~~~~ili~g~----g--~~~~~~~~a~~~~---G~~v~~~~~~ 43 (391)
T 1kjq_A 10 AATRVMLLGS----G--ELGKEVAIECQRL---GVEVIAVDRY 43 (391)
T ss_dssp TCCEEEEESC----S--HHHHHHHHHHHTT---TCEEEEEESS
T ss_pred CCCEEEEECC----C--HHHHHHHHHHHHc---CCEEEEEECC
Confidence 4579998843 3 2456778899988 8888887654
No 150
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=43.43 E-value=44 Score=30.27 Aligned_cols=44 Identities=23% Similarity=0.251 Sum_probs=28.0
Q ss_pred CCceEEEEeCCC---CchH-HHHHHHHHHHHHhccCCceEEEEeecccc
Q 036427 143 QPKKVLILMSDT---GGGH-RASAEAIKAAFHEKFGNEYQVFVTDLWSD 187 (536)
Q Consensus 143 ~~mKIL~~~~~~---GgGh-~~~~l~La~~L~~~~g~g~eV~v~~~~~~ 187 (536)
+|||||++.+.. -++. ..-+..+++.+.+.++ +++|.+.|+...
T Consensus 3 mM~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~-g~ev~~~dL~~~ 50 (211)
T 3p0r_A 3 AMTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHP-NDTVVELDLYKE 50 (211)
T ss_dssp -CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCT-TSEEEEEEGGGS
T ss_pred ccCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCC-CCeEEEEECCCC
Confidence 468999997553 1333 3334456677776643 689999988654
No 151
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=43.22 E-value=22 Score=32.58 Aligned_cols=38 Identities=13% Similarity=0.162 Sum_probs=31.3
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|||.| +..-|-|-...+..||..|.++ |..|.++|...
T Consensus 1 mkI~v-s~kGGvGKTt~a~~LA~~la~~---g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAV-AGKGGVGKTTVAAGLIKIMASD---YDKIYAVDGDP 38 (254)
T ss_dssp CEEEE-ECSSSHHHHHHHHHHHHHHTTT---CSCEEEEEECT
T ss_pred CEEEE-ecCCCCCHHHHHHHHHHHHHHC---CCeEEEEeCCC
Confidence 78998 6545568899999999999998 78999998644
No 152
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=43.07 E-value=81 Score=25.40 Aligned_cols=84 Identities=13% Similarity=0.075 Sum_probs=0.0
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCcc
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPR 220 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~ 220 (536)
|..++||+++-.+. .....|...|.+. |++|..++...
T Consensus 1 m~~~~~Ilivdd~~-----~~~~~l~~~L~~~---g~~v~~~~~~~---------------------------------- 38 (136)
T 2qzj_A 1 MSLQTKILIIDGDK-----DNCQKLKGFLEEK---GISIDLAYNCE---------------------------------- 38 (136)
T ss_dssp ---CCEEEEECSCH-----HHHHHHHHHHHTT---TCEEEEESSHH----------------------------------
T ss_pred CCCCCeEEEEcCCH-----HHHHHHHHHHHHC---CCEEEEECCHH----------------------------------
Q ss_pred cccchhhhhhhHHHHHHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecC
Q 036427 221 VIHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITD 282 (536)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d 282 (536)
...+.+.+.+||+|+.+......-.+-+++.......+|++.+...
T Consensus 39 ----------------~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~ 84 (136)
T 2qzj_A 39 ----------------EAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYI 84 (136)
T ss_dssp ----------------HHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESC
T ss_pred ----------------HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcC
No 153
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=43.04 E-value=1.9e+02 Score=27.21 Aligned_cols=35 Identities=20% Similarity=0.326 Sum_probs=25.6
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.++|.|+=+|+| | +++.+.+.+..|+..-+++.|.
T Consensus 12 ~~~IGv~DsG~G-g-----ltv~~~i~~~~P~~~~iy~~D~ 46 (273)
T 2oho_A 12 TRPIGFLDSGVG-G-----LTVVCELIRQLPHEKIVYIGDS 46 (273)
T ss_dssp CCCEEEEESSST-T-----HHHHHHHHHHCTTCCEEEEECG
T ss_pred CCcEEEEeCCCc-H-----HHHHHHHHHHCCCCCEEEEeCC
Confidence 458999988995 4 5677888887776666666664
No 154
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=43.00 E-value=49 Score=30.75 Aligned_cols=19 Identities=21% Similarity=0.280 Sum_probs=14.8
Q ss_pred HHHHhhCCCEEEEcCcccc
Q 036427 240 KGLMKYQPDIIISVHPLMQ 258 (536)
Q Consensus 240 ~~l~~~kPDvVi~~~~~~~ 258 (536)
.+-++++||+||..+|...
T Consensus 58 ~~~~~~~pDfvI~isPN~a 76 (283)
T 1qv9_A 58 DIAEDFEPDFIVYGGPNPA 76 (283)
T ss_dssp HHHHHHCCSEEEEECSCTT
T ss_pred hhhhhcCCCEEEEECCCCC
Confidence 3348899999999887654
No 155
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=42.72 E-value=30 Score=32.85 Aligned_cols=39 Identities=21% Similarity=0.306 Sum_probs=29.5
Q ss_pred CceEEEEeCCCCchHHH---HHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSDTGGGHRA---SAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~---~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
+|||+++..+.-.-+.. .+..+++++++. |++|++++..
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~---G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREG---GIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHT---TCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHC---CCeEEEEecC
Confidence 57999998765234444 667899999998 8999888753
No 156
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=41.84 E-value=29 Score=30.62 Aligned_cols=38 Identities=24% Similarity=0.379 Sum_probs=30.0
Q ss_pred ceEEEEeC-CCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 145 KKVLILMS-DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 145 mKIL~~~~-~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
|||+.+++ .-|-|-...+..||..|.++ |..|.++|..
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~---g~~vlliD~D 39 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRS---GYNIAVVDTD 39 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHT---TCCEEEEECC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHC---CCeEEEEECC
Confidence 56665554 34459999999999999998 8899999874
No 157
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=41.75 E-value=1.3e+02 Score=23.99 Aligned_cols=42 Identities=14% Similarity=0.207 Sum_probs=21.5
Q ss_pred HHHHhhCCCEEEEcCcc--cchHH-HHHHHHcCCCCCceEEEEec
Q 036427 240 KGLMKYQPDIIISVHPL--MQHVP-LRILRAKGLLKKIVFTTVIT 281 (536)
Q Consensus 240 ~~l~~~kPDvVi~~~~~--~~~i~-~~~~~~~g~~~~ip~v~~~~ 281 (536)
+.+++.+||+|+++... ..++. +..++.......+|++.+..
T Consensus 41 ~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~ 85 (138)
T 3c3m_A 41 EALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTA 85 (138)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEES
T ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEEC
Confidence 34566789999987532 33332 22233322223467665543
No 158
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=41.32 E-value=1.1e+02 Score=24.57 Aligned_cols=26 Identities=4% Similarity=0.222 Sum_probs=16.8
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~ 172 (536)
++++|||++-.+. .....+...|.+.
T Consensus 4 ~~~~~iLivdd~~-----~~~~~l~~~L~~~ 29 (149)
T 1k66_A 4 NATQPLLVVEDSD-----EDFSTFQRLLQRE 29 (149)
T ss_dssp CTTSCEEEECCCH-----HHHHHHHHHHHHT
T ss_pred CCCccEEEEECCH-----HHHHHHHHHHHHc
Confidence 4557888876654 4445566777766
No 159
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=41.16 E-value=82 Score=30.69 Aligned_cols=18 Identities=17% Similarity=0.392 Sum_probs=14.3
Q ss_pred HHHHHHhhCCCEEEEcCc
Q 036427 238 VAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 238 l~~~l~~~kPDvVi~~~~ 255 (536)
..+.+++++||+|++.+.
T Consensus 74 ~~~~l~~~~~Dliv~~~y 91 (317)
T 3rfo_A 74 EYEKVLALEPDLIVTAAF 91 (317)
T ss_dssp HHHHHHHHCCSEEEESSC
T ss_pred HHHHHHhcCCCEEEEcCc
Confidence 346688999999998764
No 160
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=41.00 E-value=40 Score=27.44 Aligned_cols=66 Identities=17% Similarity=0.117 Sum_probs=43.7
Q ss_pred HHHhhcCeEEECCChHH---------HHHHHHhCCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 422 EAMGACDCIITKAGPGT---------IAEAMIRGLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 422 ~ll~~aDv~V~~sG~~t---------llEAma~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
.-++.||++|..+|..| +-.|-..|+|+|.....+... ....+.+.+. .++. +.+.+.++|...++
T Consensus 34 ~~I~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~--~P~~l~~~a~-~iV~Wn~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 34 ATPEDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN--VPPELEAVSS-EVVGWNPHCIRDALEDALD 109 (111)
T ss_dssp CCSSSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC--CCTTHHHHCS-EEECSCHHHHHHHHHHHHC
T ss_pred CccccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc--CCHHHHhhCc-eeccCCHHHHHHHHHhccC
Confidence 45789999888775322 234888999999998765421 2233444332 2344 78999999988764
No 161
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=41.00 E-value=32 Score=29.63 Aligned_cols=37 Identities=24% Similarity=0.149 Sum_probs=28.7
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
|||+++-.+.-|.....+..+++.|.+. |++|.+.+.
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~---g~~v~~~~~ 37 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKT---GVAVEMVDL 37 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHT---TCCEEEEET
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhC---CCeEEEEEC
Confidence 7888886554378889999999999987 777877765
No 162
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=40.96 E-value=35 Score=30.32 Aligned_cols=36 Identities=19% Similarity=0.306 Sum_probs=23.3
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEE
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQV 179 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV 179 (536)
.+|||||+|.+- -.-.-.|..+.+.+.+..|..++|
T Consensus 33 ~~mkVLFVC~GN-iCRSpmAE~l~r~~~~~~g~~~~v 68 (180)
T 4egs_A 33 GSMRVLFVCTGN-TCRSPMAEGIFNAKSKALGKDWEA 68 (180)
T ss_dssp -CCEEEEEESSS-SSHHHHHHHHHHHHHHHTTCCCEE
T ss_pred CCeEEEEEeCCC-cccCHHHHHHHHHHHHhcCCceEE
Confidence 568999999764 366667777777666554443333
No 163
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=40.54 E-value=37 Score=27.40 Aligned_cols=54 Identities=9% Similarity=0.121 Sum_probs=0.0
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecccccCCCCCCcchhHHHHHHhhccccceeecCCCccc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWSDHTPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRV 221 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 221 (536)
|+++|||++-.+. .....+...|.+. |++|..++...
T Consensus 1 m~~~~ilivdd~~-----~~~~~l~~~L~~~---g~~v~~~~~~~----------------------------------- 37 (140)
T 2qr3_A 1 MSLGTIIIVDDNK-----GVLTAVQLLLKNH---FSKVITLSSPV----------------------------------- 37 (140)
T ss_dssp -CCCEEEEECSCH-----HHHHHHHHHHTTT---SSEEEEECCHH-----------------------------------
T ss_pred CCCceEEEEeCCH-----HHHHHHHHHHHhC---CcEEEEeCCHH-----------------------------------
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhCCCEEEEc
Q 036427 222 IHQSNFAATSTFIAREVAKGLMKYQPDIIISV 253 (536)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~ 253 (536)
...+.+++.+||+|+++
T Consensus 38 ---------------~a~~~l~~~~~dlvi~d 54 (140)
T 2qr3_A 38 ---------------SLSTVLREENPEVVLLD 54 (140)
T ss_dssp ---------------HHHHHHHHSCEEEEEEE
T ss_pred ---------------HHHHHHHcCCCCEEEEe
No 164
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=40.13 E-value=1.3e+02 Score=24.01 Aligned_cols=63 Identities=13% Similarity=0.155 Sum_probs=36.6
Q ss_pred hcCeEEECC----C-hHHHHHHHH---hCCcEEEeccCCccccCChhhHhhCCce-eecC--CHHHHHHHHHHHhC
Q 036427 426 ACDCIITKA----G-PGTIAEAMI---RGLPIILNDFIAGQEAGNVPYVVENGCG-KFSK--SPKEIANMVSQWFG 490 (536)
Q Consensus 426 ~aDv~V~~s----G-~~tllEAma---~GlPVI~~~~~~~~e~~na~~lv~~g~g-~~~~--d~~~La~~I~~ll~ 490 (536)
..|++++-. . +..+++.+. ..+|+|+.-.....+ ......+.|.. ++.. +.++|...|..++.
T Consensus 49 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~--~~~~~~~~g~~~~l~kp~~~~~l~~~l~~~~~ 122 (143)
T 3jte_A 49 SIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGDLD--NAILAMKEGAFEYLRKPVTAQDLSIAINNAIN 122 (143)
T ss_dssp TCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTCHH--HHHHHHHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCCCHH--HHHHHHHhCcceeEeCCCCHHHHHHHHHHHHH
Confidence 456666532 1 444454433 368888876443322 23334556654 3443 89999999998886
No 165
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=39.49 E-value=1.7e+02 Score=25.74 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=19.5
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
|+|||+++-.+. .....+...|.+. +++|..+
T Consensus 1 M~~~ilivdd~~-----~~~~~l~~~L~~~---g~~v~~~ 32 (225)
T 1kgs_A 1 MNVRVLVVEDER-----DLADLITEALKKE---MFTVDVC 32 (225)
T ss_dssp -CCEEEEECSSH-----HHHHHHHHHHHHT---TCEEEEE
T ss_pred CCceEEEEeCCH-----HHHHHHHHHHHHC---CCEEEEE
Confidence 357888876654 4445566677665 6666543
No 166
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=39.48 E-value=2.3e+02 Score=28.87 Aligned_cols=37 Identities=19% Similarity=0.386 Sum_probs=30.1
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.+|.++++..|-|-.+.+..||..|.++ |..|.+++.
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~---G~kVllv~~ 136 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKR---GYKVGVVCS 136 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTT---TCCEEEEEC
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHC---CCeEEEEeC
Confidence 4666666667789999999999999988 778877765
No 167
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=39.30 E-value=43 Score=30.17 Aligned_cols=43 Identities=21% Similarity=0.250 Sum_probs=28.1
Q ss_pred CceEEEEeCC-CC-chH-HHHHHHHHHHHHhccCCceEEEEeecccc
Q 036427 144 PKKVLILMSD-TG-GGH-RASAEAIKAAFHEKFGNEYQVFVTDLWSD 187 (536)
Q Consensus 144 ~mKIL~~~~~-~G-gGh-~~~~l~La~~L~~~~g~g~eV~v~~~~~~ 187 (536)
|||||++.++ .+ ++. ..-+..+++.+.+.++ |++|.+.++...
T Consensus 1 MmkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~-g~~v~~~dL~~~ 46 (212)
T 3r6w_A 1 MSRILAVHASPRGERSQSRRLAEVFLAAYREAHP-QARVARREVGRV 46 (212)
T ss_dssp CCCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCT-TCCEEEEESSSS
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CCeEEEEECCCC
Confidence 5899998755 33 233 3345567777777643 678988887553
No 168
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=39.21 E-value=2.3e+02 Score=25.96 Aligned_cols=158 Identities=13% Similarity=0.022 Sum_probs=73.9
Q ss_pred HHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEcCH----HHHHHHHHh
Q 036427 237 EVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTA----DVAKRAMKA 312 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~----~~~~~l~~~ 312 (536)
.+.+.+...++|.|+........-.+..++..+ +|+|++-.+... ....+.|..-.. ...+.+.+.
T Consensus 60 ~~~~~~~~~~vdgiIi~~~~~~~~~~~~l~~~~----iPvV~~~~~~~~------~~~~~~V~~D~~~~g~~a~~~L~~~ 129 (292)
T 3k4h_A 60 GVVKMVQGRQIGGIILLYSRENDRIIQYLHEQN----FPFVLIGKPYDR------KDEITYVDNDNYTAAREVAEYLISL 129 (292)
T ss_dssp HHHHHHHTTCCCEEEESCCBTTCHHHHHHHHTT----CCEEEESCCSSC------TTTSCEEECCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCEEEEeCCCCChHHHHHHHHCC----CCEEEECCCCCC------CCCCCEEEECcHHHHHHHHHHHHHC
Confidence 444557778999998865433222233344455 898877554421 111334433332 233344444
Q ss_pred CCCCCCEEEeCCCCCCCCCCCCCchH---HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEE
Q 036427 313 GLQASQIKVYGLPVRPSFVKPVRPKV---ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVL 389 (536)
Q Consensus 313 g~~~~ki~vignpv~~~~~~~~~~~~---~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~l 389 (536)
| ..++-++..+...... ....+ +..++.+++.+...+. .+. .........+.+.+. ..++...+
T Consensus 130 G--~~~i~~i~~~~~~~~~--~~R~~gf~~~l~~~g~~~~~~~~~-~~~----~~~~~~~~~~~~~l~----~~~~~~ai 196 (292)
T 3k4h_A 130 G--HKQIAFIGGGSDLLVT--RDRLAGMSDALKLADIVLPKEYIL-HFD----FSRESGQQAVEELMG----LQQPPTAI 196 (292)
T ss_dssp T--CCCEEEEESCTTBHHH--HHHHHHHHHHHHHTTCCCCGGGEE-ECC----SSHHHHHHHHHHHHT----SSSCCSEE
T ss_pred C--CceEEEEeCcccchhH--HHHHHHHHHHHHHcCCCCChheEE-ecC----CCHHHHHHHHHHHHc----CCCCCcEE
Confidence 4 3467766543221100 00011 2223456654333332 222 122333444444443 23444444
Q ss_pred EEecCCH---HHHHHHHcCCCC--CCEEEecChh
Q 036427 390 VICGRNK---KLANKLLSTDWK--IPVQVKGFVS 418 (536)
Q Consensus 390 vi~G~~~---~l~~~l~~~~~~--~~V~~~G~v~ 418 (536)
+. .... ...+.+++.++. ..|.++|+-+
T Consensus 197 ~~-~~d~~a~g~~~al~~~g~~vP~di~vig~d~ 229 (292)
T 3k4h_A 197 MA-TDDLIGLGVLSALSKKGFVVPKDVSIVSFNN 229 (292)
T ss_dssp EE-SSHHHHHHHHHHHHHTTCCTTTTCEEEEESC
T ss_pred EE-cChHHHHHHHHHHHHhCCCCCCeEEEEEecC
Confidence 43 3322 345666776654 7788888754
No 169
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=39.09 E-value=2.5e+02 Score=26.47 Aligned_cols=41 Identities=20% Similarity=0.146 Sum_probs=28.3
Q ss_pred cCCCCCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 136 LNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 136 ~~~~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
+.|.++ .|+|.++=+|.| | ++.++++.+..|+..-+++.|.
T Consensus 18 ~~~~~~--~~~IgvfDSGvG-G-----Ltv~~~i~~~lP~e~~iy~~D~ 58 (274)
T 3uhf_A 18 LYFQSN--AMKIGVFDSGVG-G-----LSVLKSLYEARLFDEIIYYGDT 58 (274)
T ss_dssp CCCCCS--CCEEEEEESSST-T-----HHHHHHHHHTTCCSEEEEEECT
T ss_pred eeccCC--CCeEEEEECCCC-h-----HHHHHHHHHHCCCCCEEEEecC
Confidence 455553 478999999994 3 3445677777787666788875
No 170
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=39.05 E-value=2.3e+02 Score=25.95 Aligned_cols=37 Identities=16% Similarity=0.239 Sum_probs=22.8
Q ss_pred ceEEEEeCCCCc-hHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 145 KKVLILMSDTGG-GHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 145 mKIL~~~~~~Gg-Gh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.+|.++..+... -.......+.+++.+. |+++.+.+.
T Consensus 16 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~---g~~~~~~~~ 53 (298)
T 3tb6_A 16 KTIGVLTTYISDYIFPSIIRGIESYLSEQ---GYSMLLTST 53 (298)
T ss_dssp CEEEEEESCSSSTTHHHHHHHHHHHHHHT---TCEEEEEEC
T ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHHHC---CCEEEEEeC
Confidence 689988876422 2233444555666666 788877654
No 171
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=38.88 E-value=41 Score=30.95 Aligned_cols=47 Identities=17% Similarity=0.086 Sum_probs=25.3
Q ss_pred cCCCCCCCCceEEEEeCCCC-----chHHH-HHHHHHHHHHhccCCceEEEEeecc
Q 036427 136 LNGIENDQPKKVLILMSDTG-----GGHRA-SAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 136 ~~~~~~~~~mKIL~~~~~~G-----gGh~~-~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
+-+.....|||||++.+..- ++... -+..+++.+.+. |++|.+.++.
T Consensus 17 ~~~~~~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~---g~ev~~~dL~ 69 (218)
T 3rpe_A 17 NLYFQSNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRES---GHQVKITTVD 69 (218)
T ss_dssp --C----CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHT---TCCEEEEEGG
T ss_pred ccccccccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhC---CCEEEEEECC
Confidence 35666677899999975531 22222 233455666665 7788887763
No 172
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=38.84 E-value=39 Score=30.81 Aligned_cols=39 Identities=10% Similarity=0.074 Sum_probs=23.4
Q ss_pred CCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCc-eEEEEeecc
Q 036427 140 ENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNE-YQVFVTDLW 185 (536)
Q Consensus 140 ~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g-~eV~v~~~~ 185 (536)
.+.++||..++++++| | ....+++.|.++ | ++|.+.+..
T Consensus 18 ~~~~~mk~vlVtGatG-~---iG~~l~~~L~~~---G~~~V~~~~R~ 57 (236)
T 3qvo_A 18 YFQGHMKNVLILGAGG-Q---IARHVINQLADK---QTIKQTLFARQ 57 (236)
T ss_dssp ----CCEEEEEETTTS-H---HHHHHHHHHTTC---TTEEEEEEESS
T ss_pred eecCcccEEEEEeCCc-H---HHHHHHHHHHhC---CCceEEEEEcC
Confidence 3344456566666662 3 344578889888 7 888887653
No 173
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=38.42 E-value=45 Score=30.48 Aligned_cols=36 Identities=14% Similarity=0.306 Sum_probs=25.9
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
.++|||++.++|- .|..+ +..|.+.|.+. |++|.++
T Consensus 2 ~~~k~IllgvTGa-iaa~k-~~~ll~~L~~~---g~eV~vv 37 (209)
T 3zqu_A 2 SGPERITLAMTGA-SGAQY-GLRLLDCLVQE---EREVHFL 37 (209)
T ss_dssp CSCSEEEEEECSS-SCHHH-HHHHHHHHHHT---TCEEEEE
T ss_pred CCCCEEEEEEECH-HHHHH-HHHHHHHHHHC---CCEEEEE
Confidence 4557999887664 35555 77799999998 7777554
No 174
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=38.42 E-value=43 Score=27.94 Aligned_cols=37 Identities=30% Similarity=0.398 Sum_probs=27.1
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
|||+++..+..|-....+..+++.+.+. +++|.+.+.
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~---g~~v~~~~~ 37 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADA---GYEVDSRDA 37 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHH---TCEEEEEEG
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhc---CCeeEEEeh
Confidence 6888876543256677778888888887 778877765
No 175
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=38.18 E-value=41 Score=29.63 Aligned_cols=42 Identities=21% Similarity=0.091 Sum_probs=25.2
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEee
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTD 183 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~ 183 (536)
...||||||+|.|- -.-.-.|..+.+.+.++.|-+..+.|.+
T Consensus 15 ~~~M~kVLFVCtGN-iCRSpmAE~i~r~~~~~~gl~~~~~v~S 56 (173)
T 4etm_A 15 RGSMISVLFVCLGN-ICRSPMAEAIFRDLAAKKGLEGKIKADS 56 (173)
T ss_dssp CSSCEEEEEEESSS-SSHHHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCccEEEEEeCCc-chhhHHHHHHHHHHHHHcCCCCceEEec
Confidence 34568999999763 3556666777777665422222344444
No 176
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=38.14 E-value=57 Score=30.52 Aligned_cols=45 Identities=18% Similarity=0.033 Sum_probs=30.0
Q ss_pred CCCCCCceEEEEeCCC-CchHH-HHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 139 IENDQPKKVLILMSDT-GGGHR-ASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 139 ~~~~~~mKIL~~~~~~-GgGh~-~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
...+.+|||+++.++. .+|.. ..+..+++.+.+. |++|.+.++..
T Consensus 29 ~~~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~---g~eve~idL~~ 75 (247)
T 2q62_A 29 AFSTHRPRILILYGSLRTVSYSRLLAEEARRLLEFF---GAEVKVFDPSG 75 (247)
T ss_dssp CCCCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHT---TCEEEECCCTT
T ss_pred hccCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhC---CCEEEEEEhhc
Confidence 4456678999997653 23444 4455577777766 78898887643
No 177
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=38.06 E-value=91 Score=29.87 Aligned_cols=36 Identities=22% Similarity=0.207 Sum_probs=23.8
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
|++||||++..+. . ..++++|++..+ .++|++++..
T Consensus 2 m~~~~Ili~g~g~----~---~~l~~~l~~~~~-~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGR----R---AKLVEYFVKEFK-TGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTT----C---HHHHHHHHHHCC-SSEEEEEESC
T ss_pred CccceEEEecCCc----h---HHHHHHHHHhcC-CCEEEEEeCC
Confidence 4668999974433 1 367888888632 1788887753
No 178
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=37.52 E-value=41 Score=27.15 Aligned_cols=68 Identities=19% Similarity=0.122 Sum_probs=38.4
Q ss_pred CcEEEEEecCCH-------HHHHHHHcCCCCCCEEEecC-hhhHHHHHhhcCeEEECCC---hHHHHHHHH--hCCcEEE
Q 036427 385 IGQVLVICGRNK-------KLANKLLSTDWKIPVQVKGF-VSKMEEAMGACDCIITKAG---PGTIAEAMI--RGLPIIL 451 (536)
Q Consensus 385 ~~~~lvi~G~~~-------~l~~~l~~~~~~~~V~~~G~-v~~l~~ll~~aDv~V~~sG---~~tllEAma--~GlPVI~ 451 (536)
..+++++|+.|- .+++..++.++ .+.+... ..+..+.+...|++++.+- -..=++..+ .|+||.+
T Consensus 6 ~mkIlL~C~aGmSTsllv~km~~~a~~~gi--~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 6 ELKVLVLCAGSGTSAQLANAINEGANLTEV--RVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp CEEEEEEESSSSHHHHHHHHHHHHHHHHTC--SEEEEEEETTSCTTTGGGCSEEEECGGGGGGHHHHHHHHTTTTCEEEE
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCC--ceEEEEcchHHHHhhccCCCEEEEChHHHHHHHHHHHHhhhcCCcEEE
Confidence 356677776652 33444444444 3444221 2244566788999998652 222344443 4899999
Q ss_pred ecc
Q 036427 452 NDF 454 (536)
Q Consensus 452 ~~~ 454 (536)
+|.
T Consensus 84 I~~ 86 (108)
T 3nbm_A 84 TRG 86 (108)
T ss_dssp CCH
T ss_pred eCH
Confidence 883
No 179
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=37.39 E-value=2.1e+02 Score=25.84 Aligned_cols=33 Identities=12% Similarity=0.350 Sum_probs=21.5
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
++++|||++-.+. .....|...|.+. |++|..+
T Consensus 21 ~~~~~ILivdd~~-----~~~~~l~~~L~~~---g~~v~~~ 53 (250)
T 3r0j_A 21 TPEARVLVVDDEA-----NIVELLSVSLKFQ---GFEVYTA 53 (250)
T ss_dssp CSSCEEEEECSCH-----HHHHHHHHHHHHT---TCEEEEE
T ss_pred CCCceEEEEECCH-----HHHHHHHHHHHHC---CCEEEEE
Confidence 4567998887664 3445566777766 6776543
No 180
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=37.25 E-value=1.2e+02 Score=23.27 Aligned_cols=13 Identities=31% Similarity=0.363 Sum_probs=9.9
Q ss_pred HHhhCCCEEEEcC
Q 036427 242 LMKYQPDIIISVH 254 (536)
Q Consensus 242 l~~~kPDvVi~~~ 254 (536)
+.+.+||+|+.+.
T Consensus 41 ~~~~~~dlvi~D~ 53 (121)
T 1zh2_A 41 AATRKPDLIILDL 53 (121)
T ss_dssp HHHHCCSEEEEES
T ss_pred HhcCCCCEEEEeC
Confidence 4556899999865
No 181
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=37.19 E-value=2.6e+02 Score=26.02 Aligned_cols=36 Identities=14% Similarity=0.101 Sum_probs=24.9
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
..|+.++|++. +| -..++++.|.++ |+.|++++...
T Consensus 8 ~~k~vlVTGas-~G---IG~aia~~l~~~---G~~V~~~~r~~ 43 (285)
T 3sc4_A 8 RGKTMFISGGS-RG---IGLAIAKRVAAD---GANVALVAKSA 43 (285)
T ss_dssp TTCEEEEESCS-SH---HHHHHHHHHHTT---TCEEEEEESCC
T ss_pred CCCEEEEECCC-CH---HHHHHHHHHHHC---CCEEEEEECCh
Confidence 34677777766 33 334578899988 88998887543
No 182
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=37.13 E-value=89 Score=25.11 Aligned_cols=27 Identities=11% Similarity=0.058 Sum_probs=16.3
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhc
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~ 172 (536)
+.+++|||++-.+. .....+...|.+.
T Consensus 6 ~~~~~~iLivdd~~-----~~~~~l~~~l~~~ 32 (146)
T 3ilh_A 6 TRKIDSVLLIDDDD-----IVNFLNTTIIRMT 32 (146)
T ss_dssp -CCEEEEEEECSCH-----HHHHHHHHHHHTT
T ss_pred cCccceEEEEeCCH-----HHHHHHHHHHHhc
Confidence 34567888876653 3444566667665
No 183
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=37.10 E-value=37 Score=32.26 Aligned_cols=52 Identities=19% Similarity=0.213 Sum_probs=37.2
Q ss_pred hhcCeEEECCChHHHHHHHHh------CCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 425 GACDCIITKAGPGTIAEAMIR------GLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 425 ~~aDv~V~~sG~~tllEAma~------GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
..+|++|+-+|-+|+++++.. ++|++.++.+. .|++.+ +++++.++++.+++
T Consensus 34 ~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G~--------------lgfl~~~~~~~~~~~l~~l~~ 92 (272)
T 2i2c_A 34 VEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTGH--------------LGFYADWRPAEADKLVKLLAK 92 (272)
T ss_dssp SSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESSS--------------CCSSCCBCGGGHHHHHHHHHT
T ss_pred CCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCCC--------------CCcCCcCCHHHHHHHHHHHHc
Confidence 367999998888899997765 89999987421 222222 46778888888776
No 184
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=37.06 E-value=32 Score=30.97 Aligned_cols=36 Identities=14% Similarity=0.244 Sum_probs=23.5
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
+|||||++ +++ | .....+++.|.++ |++|++.+...
T Consensus 3 ~m~~ilIt-Gat--G--~iG~~l~~~L~~~---g~~V~~~~r~~ 38 (227)
T 3dhn_A 3 KVKKIVLI-GAS--G--FVGSALLNEALNR---GFEVTAVVRHP 38 (227)
T ss_dssp CCCEEEEE-TCC--H--HHHHHHHHHHHTT---TCEEEEECSCG
T ss_pred CCCEEEEE-cCC--c--hHHHHHHHHHHHC---CCEEEEEEcCc
Confidence 35677655 333 2 3445578889888 78998886543
No 185
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=36.50 E-value=31 Score=32.48 Aligned_cols=51 Identities=22% Similarity=0.318 Sum_probs=37.9
Q ss_pred hcCeEEECCChHHHHHHHHh---CCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 426 ACDCIITKAGPGTIAEAMIR---GLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 426 ~aDv~V~~sG~~tllEAma~---GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
.+|++|+-+|-+|+++++.. ++|++.++.+. .|++.+ +++++.++++.+++
T Consensus 41 ~~D~vv~~GGDGTll~~a~~~~~~~PilGIn~G~--------------~Gfl~~~~~~~~~~al~~i~~ 95 (258)
T 1yt5_A 41 TADLIVVVGGDGTVLKAAKKAADGTPMVGFKAGR--------------LGFLTSYTLDEIDRFLEDLRN 95 (258)
T ss_dssp CCSEEEEEECHHHHHHHHTTBCTTCEEEEEESSS--------------CCSSCCBCGGGHHHHHHHHHT
T ss_pred CCCEEEEEeCcHHHHHHHHHhCCCCCEEEEECCC--------------CCccCcCCHHHHHHHHHHHHc
Confidence 57999998888999998876 89999987321 122222 57788888888876
No 186
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=36.01 E-value=1.1e+02 Score=23.58 Aligned_cols=14 Identities=43% Similarity=0.382 Sum_probs=10.4
Q ss_pred HHHhhCCCEEEEcC
Q 036427 241 GLMKYQPDIIISVH 254 (536)
Q Consensus 241 ~l~~~kPDvVi~~~ 254 (536)
.+++.+||+|+.+.
T Consensus 40 ~~~~~~~dlvl~D~ 53 (120)
T 2a9o_A 40 QFEAEQPDIIILDL 53 (120)
T ss_dssp HHHHHCCSEEEECS
T ss_pred HHHhCCCCEEEEec
Confidence 35567899999865
No 187
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=35.07 E-value=44 Score=30.28 Aligned_cols=39 Identities=13% Similarity=0.268 Sum_probs=30.0
Q ss_pred ceEEEEe-CCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KKVLILM-SDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~-~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
+|++.++ ..-|-|-...+..||..|.++ |..|.++|...
T Consensus 2 ~~~i~v~s~kgGvGKTt~a~~LA~~la~~---g~~VlliD~D~ 41 (237)
T 1g3q_A 2 GRIISIVSGKGGTGKTTVTANLSVALGDR---GRKVLAVDGDL 41 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHT---TCCEEEEECCT
T ss_pred ceEEEEecCCCCCCHHHHHHHHHHHHHhc---CCeEEEEeCCC
Confidence 4555554 445569999999999999998 78999998643
No 188
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=34.97 E-value=88 Score=30.38 Aligned_cols=19 Identities=16% Similarity=0.263 Sum_probs=15.5
Q ss_pred HHHHHHHhhCCCEEEEcCc
Q 036427 237 EVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~~ 255 (536)
.+.+.+++++||+|++.+.
T Consensus 71 ~~~~~l~~~~~Dliv~~~~ 89 (314)
T 3tqq_A 71 VEQEKLIAMNADVMVVVAY 89 (314)
T ss_dssp HHHHHHHTTCCSEEEEESC
T ss_pred HHHHHHHhcCCCEEEEcCc
Confidence 5567799999999998764
No 189
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=34.90 E-value=50 Score=29.53 Aligned_cols=35 Identities=9% Similarity=0.146 Sum_probs=22.1
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHH-hccCCceEEEEeec
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFH-EKFGNEYQVFVTDL 184 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~-~~~g~g~eV~v~~~ 184 (536)
+|||..+++++.| | ....+++.|. +. |++|.+.+.
T Consensus 3 ~mmk~vlVtGasg-~---iG~~~~~~l~~~~---g~~V~~~~r 38 (221)
T 3r6d_A 3 AMYXYITILGAAG-Q---IAQXLTATLLTYT---DMHITLYGR 38 (221)
T ss_dssp CSCSEEEEESTTS-H---HHHHHHHHHHHHC---CCEEEEEES
T ss_pred ceEEEEEEEeCCc-H---HHHHHHHHHHhcC---CceEEEEec
Confidence 3467555565552 2 3445678888 66 788888765
No 190
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=34.73 E-value=84 Score=28.01 Aligned_cols=31 Identities=16% Similarity=0.328 Sum_probs=19.5
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
++||+++-.+. .....|...|.+. +++|..+
T Consensus 4 ~~~ilivdd~~-----~~~~~l~~~L~~~---g~~v~~~ 34 (230)
T 2oqr_A 4 ATSVLIVEDEE-----SLADPLAFLLRKE---GFEATVV 34 (230)
T ss_dssp CCEEEEECSCH-----HHHHHHHHHHHHT---TCEEEEE
T ss_pred CCeEEEEeCCH-----HHHHHHHHHHHHC---CCEEEEE
Confidence 46888876653 4445566777765 6666543
No 191
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=34.65 E-value=31 Score=28.99 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=27.8
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEee
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTD 183 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~ 183 (536)
||||+|+-.+..|-....|..|++.|.+. +++|.+.+
T Consensus 1 M~ki~I~Y~S~tGnT~~~A~~ia~~l~~~---g~~v~~~~ 37 (147)
T 2hna_A 1 MADITLISGSTLGGAEYVAEHLAEKLEEA---GFTTETLH 37 (147)
T ss_dssp CCSEEEECCTTSCCCHHHHHHHHHHHHHT---TCCEEEEC
T ss_pred CCeEEEEEECCchHHHHHHHHHHHHHHHC---CCceEEec
Confidence 46888876543367788899999999887 67776664
No 192
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=34.51 E-value=34 Score=34.36 Aligned_cols=49 Identities=14% Similarity=0.160 Sum_probs=30.4
Q ss_pred ccCCCCCCCCceEEEEeCCCCchHH---HHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 135 PLNGIENDQPKKVLILMSDTGGGHR---ASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 135 ~~~~~~~~~~mKIL~~~~~~GgGh~---~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
.+...+.|++|||+++++|.-.=|. ..+..++++|.+. +++|+.++...
T Consensus 13 ~~~~~~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~---~~~v~~i~i~~ 64 (386)
T 3e5n_A 13 NLYFQGHMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQ---RFEPVLIGIDK 64 (386)
T ss_dssp --------CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTT---TEEEEEEEECT
T ss_pred cchhhhhcCCceEEEEeccCCCCchhHHHHHHHHHHHhCcc---CCEEEEEEECC
Confidence 3467777888999999987523333 5666888888777 89998887543
No 193
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=34.47 E-value=1.8e+02 Score=23.50 Aligned_cols=62 Identities=13% Similarity=0.137 Sum_probs=36.4
Q ss_pred hcCeEEECC----C-hHHHHHHHHh-----CCcEEEeccCCccccCChhhHhhCCcee-ecC--CHHHHHHHHHHHh
Q 036427 426 ACDCIITKA----G-PGTIAEAMIR-----GLPIILNDFIAGQEAGNVPYVVENGCGK-FSK--SPKEIANMVSQWF 489 (536)
Q Consensus 426 ~aDv~V~~s----G-~~tllEAma~-----GlPVI~~~~~~~~e~~na~~lv~~g~g~-~~~--d~~~La~~I~~ll 489 (536)
..|++++-- . +..+++.+.. .+|+|+.-.....+ ......+.|... +.. ++++|.+.|+.+.
T Consensus 59 ~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~--~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~ 133 (152)
T 3heb_A 59 RAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILTTTDDQR--EIQRCYDLGANVYITKPVNYENFANAIRQLG 133 (152)
T ss_dssp CBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEEESCCCHH--HHHHHHHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEEecCCCHH--HHHHHHHCCCcEEEeCCCCHHHHHHHHHHHH
Confidence 356777642 2 5666666554 68888876544332 223345566543 443 7888888877663
No 194
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=34.47 E-value=79 Score=28.90 Aligned_cols=44 Identities=14% Similarity=0.200 Sum_probs=28.3
Q ss_pred CCceEEEEeCCC----CchHHH-HHHHHHHHHHhccCCce-EEEEeecccc
Q 036427 143 QPKKVLILMSDT----GGGHRA-SAEAIKAAFHEKFGNEY-QVFVTDLWSD 187 (536)
Q Consensus 143 ~~mKIL~~~~~~----GgGh~~-~~l~La~~L~~~~g~g~-eV~v~~~~~~ 187 (536)
.|||||++.++. -++... -+..+++.+.+.++ ++ +|.+.|+...
T Consensus 3 ~MmkIL~I~gSpr~~~~~S~s~~L~~~~~~~l~~~~~-~~~ev~~idL~~~ 52 (223)
T 3u7i_A 3 AMNKTLIINAHPKVDDTSSVSIKVFKHFLESYKELIS-NNETIEQINLYDD 52 (223)
T ss_dssp CCCEEEEEECCTTTTCTTSHHHHHHHHHHHHHHHHCC-SSCEEEEEETTTS
T ss_pred ccCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHhCC-CCCeEEEEECcCC
Confidence 468999997553 134333 34456677777633 57 9999998654
No 195
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=34.03 E-value=3e+02 Score=25.82 Aligned_cols=35 Identities=14% Similarity=0.212 Sum_probs=25.6
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
..|.++=+|.| | ++..+++++.+|+..-+++.|..
T Consensus 6 ~~IgvfDSGvG-G-----ltv~~~i~~~lP~~~~iy~~D~a 40 (269)
T 3ist_A 6 QAIGFIDSGVG-G-----LTVVREVLKQLPHEQVYYLGDTA 40 (269)
T ss_dssp CCEEEEESSST-T-----HHHHHHHHHHCTTCCEEEEECGG
T ss_pred CcEEEEECCcc-H-----HHHHHHHHHHCCCCcEEEEeCCC
Confidence 47999999994 3 44556777777877777888753
No 196
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=34.02 E-value=1.2e+02 Score=26.51 Aligned_cols=30 Identities=20% Similarity=0.430 Sum_probs=18.9
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEE
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVF 180 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~ 180 (536)
+++|||++-.+. .....|...|.+. |++|.
T Consensus 12 m~~~iLivdd~~-----~~~~~l~~~L~~~---g~~v~ 41 (205)
T 1s8n_A 12 VPRRVLIAEDEA-----LIRMDLAEMLREE---GYEIV 41 (205)
T ss_dssp CCCEEEEECSSH-----HHHHHHHHHHHHT---TCEEE
T ss_pred CCccEEEEECCH-----HHHHHHHHHHHHC---CCEEE
Confidence 346888887664 3444566667665 66665
No 197
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=33.74 E-value=36 Score=33.28 Aligned_cols=39 Identities=26% Similarity=0.357 Sum_probs=28.9
Q ss_pred CCceEEEEeCCCCchHHH---HHHHHHHHHHhccCCceEEEEeec
Q 036427 143 QPKKVLILMSDTGGGHRA---SAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~---~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
++|||+++.+|...=|.. .+..++++|.+. |++|++++.
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~---g~~v~~i~~ 43 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKE---KYEPLYIGI 43 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTT---TEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhc---CCEEEEEEE
Confidence 468999999776323333 677889999887 899988764
No 198
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=33.74 E-value=48 Score=30.70 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=29.5
Q ss_pred eEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 146 KVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 146 KIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
.|.|+...-|-|-...+..||..|.++ |..|.++|...
T Consensus 4 ~I~v~s~kgGvGKTt~a~~LA~~la~~---g~~VlliD~D~ 41 (263)
T 1hyq_A 4 TITVASGKGGTGKTTITANLGVALAQL---GHDVTIVDADI 41 (263)
T ss_dssp EEEEEESSSCSCHHHHHHHHHHHHHHT---TCCEEEEECCC
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHhC---CCcEEEEECCC
Confidence 344545555569999999999999998 78999998643
No 199
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=33.66 E-value=52 Score=31.98 Aligned_cols=38 Identities=11% Similarity=0.070 Sum_probs=31.0
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
++|+|+++.-|-|-...+.+||..|.++ |..|.++|..
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~---G~rVLlvD~D 51 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARS---GKKTLVISTD 51 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHT---TCCEEEEECC
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHC---CCcEEEEeCC
Confidence 5666666655569999999999999998 8899998754
No 200
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=33.25 E-value=59 Score=30.97 Aligned_cols=55 Identities=16% Similarity=0.172 Sum_probs=37.0
Q ss_pred HHHhhcCeEEECCChHHHHHHHHh----CCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 422 EAMGACDCIITKAGPGTIAEAMIR----GLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 422 ~ll~~aDv~V~~sG~~tllEAma~----GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
+.-..+|++|+-+|-+|++|++.. ++|++.++.+. .|++.. .++++.++++.+++
T Consensus 59 ~~~~~~D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~Gt--------------~gfla~~~~~~~~~al~~i~~ 118 (292)
T 2an1_A 59 EIGQQADLAVVVGGDGNMLGAARTLARYDINVIGINRGN--------------LGFLTDLDPDNALQQLSDVLE 118 (292)
T ss_dssp HHHHHCSEEEECSCHHHHHHHHHHHTTSSCEEEEBCSSS--------------CCSSCCBCTTSHHHHHHHHHT
T ss_pred hcccCCCEEEEEcCcHHHHHHHHHhhcCCCCEEEEECCC--------------cccCCcCCHHHHHHHHHHHHc
Confidence 445678999999888899998743 78999986321 122211 35566677777766
No 201
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=33.11 E-value=41 Score=32.40 Aligned_cols=38 Identities=13% Similarity=0.163 Sum_probs=29.7
Q ss_pred CCceEEEEeCCCCchH---HHHHHHHHHHHHhccCCceEEEEee
Q 036427 143 QPKKVLILMSDTGGGH---RASAEAIKAAFHEKFGNEYQVFVTD 183 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh---~~~~l~La~~L~~~~g~g~eV~v~~ 183 (536)
++|||+++++|.-.=| ...+..++++|.+. |++|++++
T Consensus 12 ~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~---g~~v~~i~ 52 (317)
T 4eg0_A 12 RFGKVAVLFGGESAEREVSLTSGRLVLQGLRDA---GIDAHPFD 52 (317)
T ss_dssp GGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHT---TCEEEEEC
T ss_pred hcceEEEEECCCCCcceeeHHHHHHHHHHHHHC---CCEEEEEe
Confidence 4579999998752223 34788999999998 89998887
No 202
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=33.01 E-value=99 Score=24.34 Aligned_cols=33 Identities=6% Similarity=0.109 Sum_probs=20.7
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
++++|||++-.+. .....+...|.+. |++|..+
T Consensus 3 m~~~~ilivdd~~-----~~~~~l~~~L~~~---g~~v~~~ 35 (132)
T 2rdm_A 3 LEAVTILLADDEA-----ILLLDFESTLTDA---GFLVTAV 35 (132)
T ss_dssp CSSCEEEEECSSH-----HHHHHHHHHHHHT---TCEEEEE
T ss_pred CCCceEEEEcCcH-----HHHHHHHHHHHHc---CCEEEEE
Confidence 4457888886653 4455566777765 6666543
No 203
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=32.63 E-value=51 Score=28.59 Aligned_cols=40 Identities=13% Similarity=0.061 Sum_probs=25.2
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEee
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTD 183 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~ 183 (536)
+|+||||+|.+- -.-.-.|..+.+.+.++.|-+..+.+.+
T Consensus 3 ~m~~vLFVC~gN-~cRSpmAE~~~~~~~~~~gl~~~~~v~S 42 (161)
T 3jvi_A 3 GSMKLLFVCLGN-ICRSPAAEAVMKKVIQNHHLTEKYICDS 42 (161)
T ss_dssp -CEEEEEEESSS-SSHHHHHHHHHHHHHHHTTCGGGEEEEE
T ss_pred CCcEEEEECCCc-hhHHHHHHHHHHHHHHHcCCCCcEEEEe
Confidence 568999999764 3667777777777776433222344444
No 204
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=32.53 E-value=1.9e+02 Score=22.93 Aligned_cols=35 Identities=17% Similarity=0.237 Sum_probs=22.1
Q ss_pred CCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 140 ENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 140 ~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
...+++|||++-.+. .....|...|.+. |++|..+
T Consensus 14 ~~~~~~~ilivdd~~-----~~~~~l~~~L~~~---g~~v~~~ 48 (137)
T 2pln_A 14 VPRGSMRVLLIEKNS-----VLGGEIEKGLNVK---GFMADVT 48 (137)
T ss_dssp -CTTCSEEEEECSCH-----HHHHHHHHHHHHT---TCEEEEE
T ss_pred cCCCCCeEEEEeCCH-----HHHHHHHHHHHHc---CcEEEEe
Confidence 345667898887664 4455567777775 6666543
No 205
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=32.48 E-value=57 Score=32.84 Aligned_cols=56 Identities=20% Similarity=0.291 Sum_probs=40.0
Q ss_pred HHHHhhcCeEEECCChHHHHHHHHh----CC-cEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 421 EEAMGACDCIITKAGPGTIAEAMIR----GL-PIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 421 ~~ll~~aDv~V~~sG~~tllEAma~----Gl-PVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
.+.-..+|++|+-+|-+|++.|+.. ++ |++.++.+. .|++.+ +++++.++++.+++
T Consensus 109 ~~~~~~~DlVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G~--------------lGFLt~~~~~~~~~al~~il~ 170 (388)
T 3afo_A 109 QDIVNRTDLLVTLGGDGTILHGVSMFGNTQVPPVLAFALGT--------------LGFLSPFDFKEHKKVFQEVIS 170 (388)
T ss_dssp HHHHHHCSEEEEEESHHHHHHHHHTTTTSCCCCEEEEECSS--------------CCSSCCEEGGGHHHHHHHHHT
T ss_pred hhcccCCCEEEEEeCcHHHHHHHHHhcccCCCeEEEEECCC--------------cccCCcCChHHHHHHHHHHhc
Confidence 4456789999999898899998653 57 799987321 233433 56778888888876
No 206
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=32.45 E-value=88 Score=26.74 Aligned_cols=40 Identities=20% Similarity=0.107 Sum_probs=31.2
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
..+||+|+-.+.-|.....+..+++.|.+. |++|.+.+..
T Consensus 3 ~~~kv~IvY~S~~GnT~~iA~~ia~~l~~~---g~~v~~~~~~ 42 (159)
T 3fni_A 3 AETSIGVFYVSEYGYSDRLAQAIINGITKT---GVGVDVVDLG 42 (159)
T ss_dssp CCCEEEEEECTTSTTHHHHHHHHHHHHHHT---TCEEEEEESS
T ss_pred CCCEEEEEEECCChHHHHHHHHHHHHHHHC---CCeEEEEECc
Confidence 346898887654478889999999999987 7788777653
No 207
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=32.36 E-value=3e+02 Score=25.33 Aligned_cols=154 Identities=15% Similarity=0.078 Sum_probs=71.8
Q ss_pred HHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEcCHHHH----HHHHHhC
Q 036427 238 VAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVA----KRAMKAG 313 (536)
Q Consensus 238 l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~~~~----~~l~~~g 313 (536)
+.+.+...++|-||........-.+..++..+ +|+|.+-.+.. ....+.|.+-..... +.+.+.|
T Consensus 57 ~~~~l~~~~vdGiIi~~~~~~~~~~~~l~~~~----iPvV~~~~~~~-------~~~~~~V~~D~~~~~~~a~~~L~~~G 125 (294)
T 3qk7_A 57 LIHLVETRRVDALIVAHTQPEDFRLQYLQKQN----FPFLALGRSHL-------PKPYAWFDFDNHAGASLAVKRLLELG 125 (294)
T ss_dssp HHHHHHHTCCSEEEECSCCSSCHHHHHHHHTT----CCEEEESCCCC-------SSCCEEEEECHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCCEEEEeCCCCChHHHHHHHhCC----CCEEEECCCCC-------CCCCCEEEcChHHHHHHHHHHHHHCC
Confidence 34556677899998866433222233344455 89887755432 122334444433333 3344444
Q ss_pred CCCCCEEEeCCCCCCCCCCCCCch-H---HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEE
Q 036427 314 LQASQIKVYGLPVRPSFVKPVRPK-V---ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVL 389 (536)
Q Consensus 314 ~~~~ki~vignpv~~~~~~~~~~~-~---~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~l 389 (536)
..+|-++..+..... ...+ + +..++.|++.+...+. .+. . .......++.+.+. ..++...+
T Consensus 126 --~~~I~~i~~~~~~~~---~~~R~~Gf~~al~~~g~~~~~~~~~-~~~-~---~~~~~~~~~~~~l~----~~~~~~ai 191 (294)
T 3qk7_A 126 --HQRIAFVSTDARISY---VDQRLQGYVQTMSEAGLMPLAGYLQ-KAD-P---TRPGGYLAASRLLA----LEVPPTAI 191 (294)
T ss_dssp --CCCEEEEEESSCCHH---HHHHHHHHHHHHHTTTCCCCTTCEE-EEC-S---SHHHHHHHHHHHHH----SSSCCSEE
T ss_pred --CceEEEEeCCcccch---HHHHHHHHHHHHHHCCCCCChhHee-cCC-C---CHHHHHHHHHHHHc----CCCCCcEE
Confidence 356766654322110 0011 1 1223456654433332 222 1 22333334444333 12334433
Q ss_pred EEecCCH---HHHHHHHcCCCC--CCEEEecCh
Q 036427 390 VICGRNK---KLANKLLSTDWK--IPVQVKGFV 417 (536)
Q Consensus 390 vi~G~~~---~l~~~l~~~~~~--~~V~~~G~v 417 (536)
+ +.... ...+.+++.++. +.|.++|+-
T Consensus 192 ~-~~nd~~A~g~~~al~~~G~~vP~di~vig~D 223 (294)
T 3qk7_A 192 I-TDCNMLGDGVASALDKAGLLGGEGISLIAYD 223 (294)
T ss_dssp E-ESSHHHHHHHHHHHHHTTCSSTTSCEEEEET
T ss_pred E-ECCHHHHHHHHHHHHHcCCCCCCceEEEeec
Confidence 3 33322 344566666654 678888875
No 208
>1iu8_A Pyrrolidone-carboxylate peptidase; hydrolase, thiol protease, complete proteome; 1.60A {Pyrococcus horikoshii} SCOP: c.56.4.1
Probab=32.27 E-value=81 Score=28.65 Aligned_cols=28 Identities=25% Similarity=0.380 Sum_probs=20.3
Q ss_pred ceEEEEe-CCCCchHHHHHHHHHHHHHhc
Q 036427 145 KKVLILM-SDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 145 mKIL~~~-~~~GgGh~~~~l~La~~L~~~ 172 (536)
||||++. ..+||=...+...+++.|.+.
T Consensus 1 m~VLvTGF~PF~~~~~NPS~~~v~~L~~~ 29 (206)
T 1iu8_A 1 MKILLTGFEPFGGDDKNPTMDIVEALSER 29 (206)
T ss_dssp CCEEEEEECCCTTCSCCHHHHHHHHHHHH
T ss_pred CEEEEEeecCCCCCCCCcHHHHHHHhccc
Confidence 6788776 446666677888888888765
No 209
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=32.11 E-value=59 Score=28.11 Aligned_cols=30 Identities=23% Similarity=0.269 Sum_probs=22.3
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~ 172 (536)
.++|||||+|.+- -.-.-.|..|.+.+..+
T Consensus 2 ~~~~~VLFVC~gN-~cRSpmAEal~~~~~~~ 31 (161)
T 2cwd_A 2 DRPVRVLFVCLGN-ICRSPMAEGIFRKLLKE 31 (161)
T ss_dssp CCCEEEEEEESSS-SSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCc-HHHHHHHHHHHHHHHHH
Confidence 3568999999764 46677777777877754
No 210
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=31.80 E-value=61 Score=30.11 Aligned_cols=40 Identities=15% Similarity=0.151 Sum_probs=30.3
Q ss_pred CceEEEEe-CCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 144 PKKVLILM-SDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 144 ~mKIL~~~-~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
++||+.++ ..-|-|-...+..||..|.++ |..|.++|...
T Consensus 17 ~~~vI~v~s~kGGvGKTT~a~nLA~~la~~---G~~VlliD~D~ 57 (262)
T 2ph1_A 17 IKSRIAVMSGKGGVGKSTVTALLAVHYARQ---GKKVGILDADF 57 (262)
T ss_dssp CSCEEEEECSSSCTTHHHHHHHHHHHHHHT---TCCEEEEECCS
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHC---CCeEEEEeCCC
Confidence 35555554 444559999999999999998 88999988643
No 211
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=31.63 E-value=72 Score=27.60 Aligned_cols=30 Identities=17% Similarity=-0.014 Sum_probs=22.0
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~ 172 (536)
++|+||||+|.+- -.-.-.|..+.+.+.++
T Consensus 4 ~~m~~vLFVC~gN-~cRSpmAE~i~~~~~~~ 33 (158)
T 3rof_A 4 QGMVDVAFVCLGN-ICRSPMAEAIMRQRLKD 33 (158)
T ss_dssp CSCEEEEEEESSS-SSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCc-hhHHHHHHHHHHHHHHH
Confidence 4468999999764 36667777777777654
No 212
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=31.57 E-value=2.3e+02 Score=25.61 Aligned_cols=20 Identities=25% Similarity=0.492 Sum_probs=16.7
Q ss_pred HHHHHHHHhhCCCEEEEcCc
Q 036427 236 REVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~ 255 (536)
..+.+.+++++||+|++.+.
T Consensus 69 ~~~~~~l~~~~~Dliv~agy 88 (212)
T 1jkx_A 69 RELIHEIDMYAPDVVVLAGF 88 (212)
T ss_dssp HHHHHHHGGGCCSEEEESSC
T ss_pred HHHHHHHHhcCCCEEEEeCh
Confidence 46778899999999998764
No 213
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=31.48 E-value=2.7e+02 Score=26.38 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=25.0
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.++|.++=+|+| | +++.+.+.+..|+..-+++.|.
T Consensus 24 ~~~IGvfDsG~G-g-----ltv~~~i~~~~P~~~~iy~~D~ 58 (290)
T 2vvt_A 24 QEAIGLIDSGVG-G-----LTVLKEALKQLPNERLIYLGDT 58 (290)
T ss_dssp GSCEEEEESSST-T-----HHHHHHHHHHCTTSCEEEEECT
T ss_pred CCcEEEEeCCCc-H-----HHHHHHHHHHCCCccEEEeccc
Confidence 357999988994 4 5677778777776656666654
No 214
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=31.44 E-value=87 Score=27.43 Aligned_cols=42 Identities=24% Similarity=0.180 Sum_probs=27.9
Q ss_pred CceEEEEeCCCC--chH-HHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 144 PKKVLILMSDTG--GGH-RASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 144 ~mKIL~~~~~~G--gGh-~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|||||++..+.- +|. ...+..+++.+.+. |++++|.+.++..
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~-g~~~~v~~~dl~~ 45 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREK-HVADEITVRDLAA 45 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHH-CTTCEEEEEETTT
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHh-CCCCeEEEEeccC
Confidence 579999876542 244 44455677788776 3348888888754
No 215
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=31.12 E-value=3.7e+02 Score=26.00 Aligned_cols=36 Identities=19% Similarity=0.189 Sum_probs=26.9
Q ss_pred CceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 144 PKKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 144 ~mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
|+||+++++| --.|--.....+.+..... +++|+-+
T Consensus 2 ~k~i~IltsGGdapGmNaair~vv~~a~~~---g~~v~Gi 38 (320)
T 1pfk_A 2 IKKIGVLTSGGDAPGMNAAIRGVVRSALTE---GLEVMGI 38 (320)
T ss_dssp CCEEEEEECSSCCTTHHHHHHHHHHHHHHT---TCEEEEE
T ss_pred CCEEEEEccCCCchhHHHHHHHHHHHHHHC---CCEEEEE
Confidence 5799999865 2267888888888887766 6777655
No 216
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=31.09 E-value=54 Score=28.44 Aligned_cols=30 Identities=17% Similarity=0.112 Sum_probs=21.3
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~ 172 (536)
.+++||||+|.+- -.-.-.|..+.+.+.+.
T Consensus 2 ~~~~~VLFVC~gN-~cRSpmAEal~~~~~~~ 31 (163)
T 1u2p_A 2 SDPLHVTFVCTGN-ICRSPMAEKMFAQQLRH 31 (163)
T ss_dssp --CEEEEEEESSS-SSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCc-HhHHHHHHHHHHHHHHH
Confidence 3468999999764 46677777788877655
No 217
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=30.96 E-value=3.5e+02 Score=25.58 Aligned_cols=39 Identities=15% Similarity=0.348 Sum_probs=21.2
Q ss_pred CCceEEEEeCCCCc-hHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 143 QPKKVLILMSDTGG-GHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 143 ~~mKIL~~~~~~Gg-Gh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
+..+|.++..+... -.......+.+++.+. |+++.+.+.
T Consensus 61 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~---g~~~~~~~~ 100 (339)
T 3h5o_A 61 KSRTVLVLIPSLANTVFLETLTGIETVLDAA---GYQMLIGNS 100 (339)
T ss_dssp --CEEEEEESCSTTCTTHHHHHHHHHHHHHT---TCEEEEEEC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHHHHC---CCEEEEEeC
Confidence 34578888765321 2233344455666666 778776643
No 218
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=30.92 E-value=2.9e+02 Score=25.84 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=25.1
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
++|.++=+|.| | +++.+++.+..|+..-+++.|.
T Consensus 4 ~~IgvfDSGvG-G-----ltv~~~i~~~lP~~~~iy~~D~ 37 (272)
T 1zuw_A 4 QPIGVIDSGVG-G-----LTVAKEIMRQLPKENIIYVGDT 37 (272)
T ss_dssp SCEEEEESSST-T-----HHHHHHHHHHSTTCCEEEEECG
T ss_pred CeEEEEeCCcc-h-----HHHHHHHHHhCCCCcEEEeccC
Confidence 58999989984 3 4556777777787666777775
No 219
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=30.87 E-value=3.1e+02 Score=24.99 Aligned_cols=40 Identities=15% Similarity=-0.031 Sum_probs=25.4
Q ss_pred CCCceEEEEeCCCCchH-HHHHHHHHHHHHhccCCceEEEEeec
Q 036427 142 DQPKKVLILMSDTGGGH-RASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh-~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.++.+|.++..+..... ......+.+++.+. |+++.+.+.
T Consensus 3 ~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~---g~~~~~~~~ 43 (291)
T 3l49_A 3 LEGKTIGITAIGTDHDWDLKAYQAQIAEIERL---GGTAIALDA 43 (291)
T ss_dssp CTTCEEEEEESCCSSHHHHHHHHHHHHHHHHT---TCEEEEEEC
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHHHc---CCEEEEEcC
Confidence 35578999988763222 23345566666666 888877653
No 220
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=30.83 E-value=32 Score=30.97 Aligned_cols=42 Identities=14% Similarity=0.180 Sum_probs=24.6
Q ss_pred CCCCceEEEEeCCC-CchHHHHHHHHHHHHHhccCCceEEE-Eeecc
Q 036427 141 NDQPKKVLILMSDT-GGGHRASAEAIKAAFHEKFGNEYQVF-VTDLW 185 (536)
Q Consensus 141 ~~~~mKIL~~~~~~-GgGh~~~~l~La~~L~~~~g~g~eV~-v~~~~ 185 (536)
+|.+|||+++.++. .++... .|++.+.+..+.+++|. +.++.
T Consensus 3 ~M~~mkIl~I~GS~r~~s~t~---~la~~~~~~~~~g~~v~~~idL~ 46 (199)
T 4hs4_A 3 TTSPLHFVTLLGSLRKASFNA---AVARALPEIAPEGIAITPLGSIG 46 (199)
T ss_dssp --CCEEEEEEECCCSTTCHHH---HHHHHHHHHCCTTEEEEECCCGG
T ss_pred CCCCCEEEEEEcCCCCCChHH---HHHHHHHHHccCCCEEEEEEehh
Confidence 35568999998663 233333 34555555544578888 77764
No 221
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=30.52 E-value=35 Score=29.55 Aligned_cols=39 Identities=18% Similarity=0.279 Sum_probs=25.4
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.||||+|+-....|.....+..|++.|.+. +++|.+.+.
T Consensus 8 ~~~ki~I~Y~S~tGnT~~~A~~ia~~l~~~---g~~v~~~~~ 46 (167)
T 1ykg_A 8 EMPGITIISASQTGNARRVAEALRDDLLAA---KLNVKLVNA 46 (167)
T ss_dssp ----CEEEEECSSSHHHHHHHHHHHHHHHH---TCCCEEEEG
T ss_pred CCCeEEEEEECCchHHHHHHHHHHHHHHHC---CCceEEeeh
Confidence 356888775443267788889999999887 666666654
No 222
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=30.48 E-value=1.3e+02 Score=30.25 Aligned_cols=34 Identities=24% Similarity=0.335 Sum_probs=24.0
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
++||||++.. | ..+..+++++++. |++|++++..
T Consensus 18 ~~~~ili~g~----g--~~g~~~~~a~~~~---G~~v~~v~~~ 51 (433)
T 2dwc_A 18 SAQKILLLGS----G--ELGKEIAIEAQRL---GVEVVAVDRY 51 (433)
T ss_dssp TCCEEEEESC----S--HHHHHHHHHHHHT---TCEEEEEESS
T ss_pred CCCEEEEECC----C--HHHHHHHHHHHHC---CCEEEEEECC
Confidence 3478998833 3 2456678888887 8898887653
No 223
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=30.45 E-value=2.2e+02 Score=23.25 Aligned_cols=62 Identities=13% Similarity=0.094 Sum_probs=36.6
Q ss_pred cCeEEECC----C-hHHHHHHHH---hCCcEEEeccCCccccCChhhHhhCCce-eecC--CHHHHHHHHHHHhC
Q 036427 427 CDCIITKA----G-PGTIAEAMI---RGLPIILNDFIAGQEAGNVPYVVENGCG-KFSK--SPKEIANMVSQWFG 490 (536)
Q Consensus 427 aDv~V~~s----G-~~tllEAma---~GlPVI~~~~~~~~e~~na~~lv~~g~g-~~~~--d~~~La~~I~~ll~ 490 (536)
.|++|+-- . +..+++.+. ..+|+|++-.....+ ......+.|.. ++.. +.++|.+.|..++.
T Consensus 84 ~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~--~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~ 156 (157)
T 3hzh_A 84 IDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQ--LVKDCLIKGAKTFIVKPLDRAKVLQRVMSVFV 156 (157)
T ss_dssp CCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHH--HHHHHHHTTCSEEEESSCCHHHHHHHHHHTTC
T ss_pred CCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHH--HHHHHHHcCCCEEEeCCCCHHHHHHHHHHHhc
Confidence 46766642 1 445555443 368888876543332 22334555654 3443 89999999988875
No 224
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=30.42 E-value=2.5e+02 Score=25.99 Aligned_cols=157 Identities=13% Similarity=0.041 Sum_probs=70.5
Q ss_pred HHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEcCHHHHHHHHHh--CCC
Q 036427 238 VAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRAMKA--GLQ 315 (536)
Q Consensus 238 l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~~~~~~l~~~--g~~ 315 (536)
+.+.+...++|-||........ .+..+... .+|+|.+-.+... ....+.|.+-.......+.++ ...
T Consensus 62 ~~~~l~~~~vdGiIi~~~~~~~-~~~~~~~~----~iPvV~~~~~~~~------~~~~~~V~~D~~~~g~~a~~~L~~~G 130 (301)
T 3miz_A 62 IWKMFQSHRIDGVLYVTMYRRI-VDPESGDV----SIPTVMINCRPQT------RELLPSIEPDDYQGARDLTRYLLERG 130 (301)
T ss_dssp HHHHHHHTTCSEEEEEEEEEEE-CCCCCTTC----CCCEEEEEEECSS------TTSSCEEEECHHHHHHHHHHHHHTTT
T ss_pred HHHHHHhCCCCEEEEecCCccH-HHHHHHhC----CCCEEEECCCCCC------CCCCCEEeeChHHHHHHHHHHHHHcC
Confidence 3345666789988865432221 01111222 4898877554321 002445555444444433332 122
Q ss_pred CCCEEEeCCCCCCCCCCCCCch-H---HHHHHcCCCCCCCEEEEec---CCCCCCcHH--HHHHHHHHHhhhcccCCCCc
Q 036427 316 ASQIKVYGLPVRPSFVKPVRPK-V---ELRRELGMDEDLPAVLLMG---GGEGMGPIE--ATARALGNALYDENLGEPIG 386 (536)
Q Consensus 316 ~~ki~vignpv~~~~~~~~~~~-~---~~r~~lgi~~~~~~il~~g---g~~g~k~~~--~~l~al~~~l~~~~~~~~~~ 386 (536)
..+|-++..+.... ....+ + +..++.|++.+.. .++.+ .. ...... +.+..+.+. .++.
T Consensus 131 ~~~I~~i~~~~~~~---~~~~R~~Gf~~al~~~g~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~l~~-------~~~~ 198 (301)
T 3miz_A 131 HRRIGYIRLNPILL---GAELRLDAFRRTTSEFGLTENDL-SISLGMDGPV-GAENNYVFAAATEMLKQ-------DDRP 198 (301)
T ss_dssp CCSEEEEECCTTSH---HHHHHHHHHHHHHHHHTCCGGGE-EEEECEESST-TSCEECHHHHHHHHHTS-------TTCC
T ss_pred CCeEEEEecCccch---hHHHHHHHHHHHHHHcCCCCCcc-eEEEcCCCCc-CccccHHHHHHHHHHcC-------CCCC
Confidence 45677665432211 00011 1 2233456654332 33333 22 222222 334434321 2334
Q ss_pred EEEEEecCCH---HHHHHHHcCCCC--CCEEEecChh
Q 036427 387 QVLVICGRNK---KLANKLLSTDWK--IPVQVKGFVS 418 (536)
Q Consensus 387 ~~lvi~G~~~---~l~~~l~~~~~~--~~V~~~G~v~ 418 (536)
..++. .... ...+.+++.++. ..|.++|+-+
T Consensus 199 ~ai~~-~~d~~A~g~~~al~~~g~~vP~di~vig~D~ 234 (301)
T 3miz_A 199 TAIMS-GNDEMAIQIYIAAMALGLRIPQDVSIVGFDD 234 (301)
T ss_dssp SEEEE-SSHHHHHHHHHHHHTTTCCHHHHCEEECSBC
T ss_pred cEEEE-CCHHHHHHHHHHHHHcCCCCCCCeeEEEeCC
Confidence 44443 3322 345667777765 6788999853
No 225
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=30.35 E-value=55 Score=30.07 Aligned_cols=40 Identities=23% Similarity=0.347 Sum_probs=30.4
Q ss_pred CceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 144 PKKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 144 ~mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|+||+.+++. -|-|-...+..||..|.++ |..|.++|...
T Consensus 1 M~~vi~v~s~kgGvGKTt~a~~LA~~la~~---g~~VlliD~D~ 41 (260)
T 3q9l_A 1 MARIIVVTSGKGGVGKTTSSAAIATGLAQK---GKKTVVIDFAI 41 (260)
T ss_dssp -CEEEEEECSSTTSSHHHHHHHHHHHHHHT---TCCEEEEECCC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhC---CCcEEEEECCC
Confidence 3466655544 4459999999999999998 88999998643
No 226
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=30.24 E-value=2.1e+02 Score=22.78 Aligned_cols=89 Identities=7% Similarity=0.068 Sum_probs=48.6
Q ss_pred HHHHcCCCCCCEEEecChhhHHHHHh------------hcCeEEECC----C-hHHHHHHHH-----hCCcEEEeccCCc
Q 036427 400 NKLLSTDWKIPVQVKGFVSKMEEAMG------------ACDCIITKA----G-PGTIAEAMI-----RGLPIILNDFIAG 457 (536)
Q Consensus 400 ~~l~~~~~~~~V~~~G~v~~l~~ll~------------~aDv~V~~s----G-~~tllEAma-----~GlPVI~~~~~~~ 457 (536)
+.++..+....+.......+..+.+. ..|++++-- . +..+++.+. ..+|+|+.-....
T Consensus 24 ~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~t~~~~ 103 (149)
T 1k66_A 24 RLLQREGVVNPIYRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVIMTTSSN 103 (149)
T ss_dssp HHHHHTTBCSCEEEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHHHHTTSTTGGGSCEEEEESCCC
T ss_pred HHHHHcCCCceEEEECCHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHHHHHHhCcccCCCeEEEEeCCCC
Confidence 34444333224555544444444443 357777642 1 455666554 4688888764433
Q ss_pred cccCChhhHhhCCcee-ecC--CHHHHHHHHHHHhC
Q 036427 458 QEAGNVPYVVENGCGK-FSK--SPKEIANMVSQWFG 490 (536)
Q Consensus 458 ~e~~na~~lv~~g~g~-~~~--d~~~La~~I~~ll~ 490 (536)
.+ ......+.|... +.. +.++|.+.|..++.
T Consensus 104 ~~--~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~ 137 (149)
T 1k66_A 104 PK--DIEICYSYSISSYIVKPLEIDRLTETVQTFIK 137 (149)
T ss_dssp HH--HHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred HH--HHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 22 223344566544 433 78888888877764
No 227
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=30.01 E-value=1.8e+02 Score=26.58 Aligned_cols=54 Identities=22% Similarity=0.135 Sum_probs=35.0
Q ss_pred HHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCC-h-------------HHHHHHHHhCCcEEEecc
Q 036427 399 ANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAG-P-------------GTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 399 ~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG-~-------------~tllEAma~GlPVI~~~~ 454 (536)
.+.+++++. .+..+...++..+.+..||.+++|+| . -.+-|+...|+|++.+-.
T Consensus 54 ~~al~~lG~--~~~~v~~~~d~~~~l~~ad~I~lpGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sA 121 (229)
T 1fy2_A 54 AEVLAPLGV--NVTGIHRVADPLAAIEKAEIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWSA 121 (229)
T ss_dssp HHHHGGGTC--EEEETTSSSCHHHHHHHCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEETH
T ss_pred HHHHHHCCC--EEEEEeccccHHHHHhcCCEEEECCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEECH
Confidence 344555443 34444333566678899999999975 2 234556678999988765
No 228
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=29.90 E-value=24 Score=31.72 Aligned_cols=39 Identities=15% Similarity=0.221 Sum_probs=25.9
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
|||||++.+..-.+....+.++++.+++. +++|.+.++.
T Consensus 1 MmkiLiI~gsp~~~~s~l~~~l~~~~~~~---g~ev~~~dL~ 39 (192)
T 3f2v_A 1 MPKTLIILAHPNISQSTVHKHWSDAVRQH---TDRFTVHELY 39 (192)
T ss_dssp -CCEEEEECCTTGGGCSHHHHHHHHHTTC---TTTEEEEEHH
T ss_pred CCEEEEEEeCCCccHHHHHHHHHHHHHhC---CCeEEEEEch
Confidence 58999987653222235667778888776 6678887764
No 229
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=29.87 E-value=60 Score=26.70 Aligned_cols=21 Identities=24% Similarity=-0.190 Sum_probs=15.0
Q ss_pred HHHHhhCCCEEEEcC--cccchH
Q 036427 240 KGLMKYQPDIIISVH--PLMQHV 260 (536)
Q Consensus 240 ~~l~~~kPDvVi~~~--~~~~~i 260 (536)
+.+++.+||+|+++. |-..++
T Consensus 47 ~~~~~~~~DlvllDi~mP~~~G~ 69 (123)
T 2lpm_A 47 DIARKGQFDIAIIDVNLDGEPSY 69 (123)
T ss_dssp HHHHHCCSSEEEECSSSSSCCSH
T ss_pred HHHHhCCCCEEEEecCCCCCCHH
Confidence 446778999999976 444554
No 230
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=29.45 E-value=89 Score=24.72 Aligned_cols=38 Identities=18% Similarity=0.337 Sum_probs=24.8
Q ss_pred CceEEEEeCC--CCchHHHHHHHHHHHHHhccCC-ceEEEE
Q 036427 144 PKKVLILMSD--TGGGHRASAEAIKAAFHEKFGN-EYQVFV 181 (536)
Q Consensus 144 ~mKIL~~~~~--~GgGh~~~~l~La~~L~~~~g~-g~eV~v 181 (536)
|||++|+..+ .+.-....++.+|.++.+.+|+ .+.|++
T Consensus 1 M~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff 41 (117)
T 1jx7_A 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFL 41 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEE
Confidence 4688887644 3456677789999998876344 333443
No 231
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=29.45 E-value=38 Score=32.05 Aligned_cols=32 Identities=19% Similarity=0.242 Sum_probs=22.4
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
||||++ +++| .....|++.|.++ ||+|.+.+.
T Consensus 1 MkILVT-GatG----fIG~~L~~~L~~~---G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG-GGTG----FIGTALTQLLNAR---GHEVTLVSR 32 (298)
T ss_dssp CEEEEE-TTTS----HHHHHHHHHHHHT---TCEEEEEES
T ss_pred CEEEEE-CCCC----HHHHHHHHHHHHC---CCEEEEEEC
Confidence 788754 4442 3445678999998 889988754
No 232
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=29.40 E-value=54 Score=26.24 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=22.7
Q ss_pred CCCceEEEEeC-CCCchHHHHHHHHHHHHHhccCCceEEE
Q 036427 142 DQPKKVLILMS-DTGGGHRASAEAIKAAFHEKFGNEYQVF 180 (536)
Q Consensus 142 ~~~mKIL~~~~-~~GgGh~~~~l~La~~L~~~~g~g~eV~ 180 (536)
|.+|||+++|+ |+ +....+..+-+.+.++ |.++.
T Consensus 1 M~mkkIll~Cg~G~--sTS~l~~k~~~~~~~~---gi~~~ 35 (106)
T 1e2b_A 1 MEKKHIYLFSSAGM--STSLLVSKMRAQAEKY---EVPVI 35 (106)
T ss_dssp CCCEEEEEECSSST--TTHHHHHHHHHHHHHS---CCSEE
T ss_pred CCCcEEEEECCCch--hHHHHHHHHHHHHHHC---CCCeE
Confidence 35679999985 45 3335666788888877 55443
No 233
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=29.38 E-value=49 Score=32.75 Aligned_cols=39 Identities=13% Similarity=0.211 Sum_probs=30.4
Q ss_pred ceEEEEeCCC-CchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KKVLILMSDT-GGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~~~~-GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|||+.+++.- |-|-...+..||..|.+. |..|.++|...
T Consensus 1 MkvIav~s~KGGvGKTT~a~nLA~~LA~~---G~rVLlID~D~ 40 (361)
T 3pg5_A 1 MRTISFFNNKGGVGKTTLSTNVAHYFALQ---GKRVLYVDCDP 40 (361)
T ss_dssp CEEEEBCCSSCCHHHHHHHHHHHHHHHHT---TCCEEEEECCT
T ss_pred CeEEEEEcCCCCCcHHHHHHHHHHHHHhC---CCcEEEEEcCC
Confidence 5666665544 348899999999999997 88999998653
No 234
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=29.37 E-value=67 Score=31.58 Aligned_cols=40 Identities=18% Similarity=0.199 Sum_probs=31.8
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
.+++|+|+++.-|-|-...+.+||..|.+. |..|.++|..
T Consensus 24 ~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~---G~rVLlvD~D 63 (349)
T 3ug7_A 24 DGTKYIMFGGKGGVGKTTMSAATGVYLAEK---GLKVVIVSTD 63 (349)
T ss_dssp CSCEEEEEECSSSTTHHHHHHHHHHHHHHS---SCCEEEEECC
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHHC---CCeEEEEeCC
Confidence 445666666655569999999999999998 8899998753
No 235
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=29.35 E-value=31 Score=30.88 Aligned_cols=41 Identities=10% Similarity=0.143 Sum_probs=25.2
Q ss_pred CCCceEEEEeCCC-CchHHHHHHHHHHHHHhccCCceEEE-Eeecc
Q 036427 142 DQPKKVLILMSDT-GGGHRASAEAIKAAFHEKFGNEYQVF-VTDLW 185 (536)
Q Consensus 142 ~~~mKIL~~~~~~-GgGh~~~~l~La~~L~~~~g~g~eV~-v~~~~ 185 (536)
+++|||+++.++. .++. ...|++++.+..+.+++|. +.++.
T Consensus 2 ~~~mkil~I~GS~r~~s~---t~~l~~~~~~~~~~g~~v~~~idL~ 44 (193)
T 3svl_A 2 AEKLQVVTLLGSLRKGSF---NGMVARTLPKIAPASMEVNALPSIA 44 (193)
T ss_dssp --CEEEEEEECCCSTTCH---HHHHHHHGGGTSCTTEEEEECCCST
T ss_pred CCCCEEEEEEccCCCCCH---HHHHHHHHHHHccCCCEEEEEEeHH
Confidence 4579999998653 2233 2345666666555578888 77764
No 236
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=29.21 E-value=69 Score=25.88 Aligned_cols=34 Identities=18% Similarity=0.311 Sum_probs=22.9
Q ss_pred CCCCceEEEEeC-CCCchHHH-HHHHHHHHHHhccCCceEE
Q 036427 141 NDQPKKVLILMS-DTGGGHRA-SAEAIKAAFHEKFGNEYQV 179 (536)
Q Consensus 141 ~~~~mKIL~~~~-~~GgGh~~-~~l~La~~L~~~~g~g~eV 179 (536)
..+++||+++|+ |+ |... -+..+.+.+.+. |.++
T Consensus 18 ~~~~kkIlvvC~sG~--gTS~ll~~kl~~~~~~~---gi~~ 53 (113)
T 1tvm_A 18 QGSKRKIIVACGGAV--ATSTMAAEEIKELCQSH---NIPV 53 (113)
T ss_dssp SCSSEEEEEESCSCS--SHHHHHHHHHHHHHHHT---TCCE
T ss_pred cccccEEEEECCCCH--HHHHHHHHHHHHHHHHc---CCeE
Confidence 345678999985 45 5555 466777788776 5554
No 237
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=29.00 E-value=2.2e+02 Score=25.95 Aligned_cols=101 Identities=10% Similarity=-0.002 Sum_probs=46.5
Q ss_pred CcEEEEEecCC-HHHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCC-h---HHHHHHHHhCCcEEEeccCCccc
Q 036427 385 IGQVLVICGRN-KKLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAG-P---GTIAEAMIRGLPIILNDFIAGQE 459 (536)
Q Consensus 385 ~~~~lvi~G~~-~~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG-~---~tllEAma~GlPVI~~~~~~~~e 459 (536)
+..+.++...- +++.+..++ .++.+....-+ .+.+..+|++|..++ + ..+.++...|+||-+.+.+..-.
T Consensus 54 GA~VtVvap~~~~~l~~l~~~----~~i~~i~~~~~-~~dL~~adLVIaAT~d~~~N~~I~~~ak~gi~VNvvD~p~~~~ 128 (223)
T 3dfz_A 54 GAAITVVAPTVSAEINEWEAK----GQLRVKRKKVG-EEDLLNVFFIVVATNDQAVNKFVKQHIKNDQLVNMASSFSDGN 128 (223)
T ss_dssp CCCEEEECSSCCHHHHHHHHT----TSCEEECSCCC-GGGSSSCSEEEECCCCTHHHHHHHHHSCTTCEEEC-----CCS
T ss_pred CCEEEEECCCCCHHHHHHHHc----CCcEEEECCCC-HhHhCCCCEEEECCCCHHHHHHHHHHHhCCCEEEEeCCcccCe
Confidence 34555555443 344443332 24555432211 244678999998876 2 23444444789988877643322
Q ss_pred cCChhhHhhCCceeecC----C---HHHHHHHHHHHhC
Q 036427 460 AGNVPYVVENGCGKFSK----S---PKEIANMVSQWFG 490 (536)
Q Consensus 460 ~~na~~lv~~g~g~~~~----d---~~~La~~I~~ll~ 490 (536)
......+...+..+.+. + ...|.+.|+.++.
T Consensus 129 f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~~lp 166 (223)
T 3dfz_A 129 IQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSSNYD 166 (223)
T ss_dssp EECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHSC
T ss_pred EEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHHHcc
Confidence 21122222333333332 2 2455555666664
No 238
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=28.76 E-value=2.3e+02 Score=27.57 Aligned_cols=19 Identities=5% Similarity=0.025 Sum_probs=15.2
Q ss_pred HHHHHHHhhCCCEEEEcCc
Q 036427 237 EVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~~ 255 (536)
.+.+.+++++||+|++.+.
T Consensus 90 ~~~~~l~~~~~Dliv~a~y 108 (329)
T 2bw0_A 90 DVVAKYQALGAELNVLPFC 108 (329)
T ss_dssp HHHHHHHTTCCSEEEESSC
T ss_pred HHHHHHHhcCCCEEEEeeh
Confidence 4556788999999998764
No 239
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=28.57 E-value=45 Score=33.39 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=31.5
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
||||+++++.-|-|-...+.+||..+.+. |..|.++|.
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~---g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQ---GKRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHT---TCCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHC---CCCeEEEeC
Confidence 57888887665668889999999999998 888988886
No 240
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=28.17 E-value=66 Score=31.95 Aligned_cols=39 Identities=21% Similarity=0.365 Sum_probs=29.5
Q ss_pred CCceEEEEeCCCCch-HH---HHHHHHHHHH-HhccCCceEEEEeecc
Q 036427 143 QPKKVLILMSDTGGG-HR---ASAEAIKAAF-HEKFGNEYQVFVTDLW 185 (536)
Q Consensus 143 ~~mKIL~~~~~~GgG-h~---~~~l~La~~L-~~~~g~g~eV~v~~~~ 185 (536)
++|||+++.+|. .. |. ..+..++++| .+. +++|+.++..
T Consensus 2 ~k~~v~vl~gG~-s~E~~vSl~s~~~v~~al~~~~---g~~v~~i~~~ 45 (377)
T 1ehi_A 2 TKKRVALIFGGN-SSEHDVSKRSAQNFYNAIEATG---KYEIIVFAIA 45 (377)
T ss_dssp -CEEEEEEEECS-STTHHHHHHHHHHHHHHHHHHS---SEEEEEEEEC
T ss_pred CCcEEEEEeCCC-CCCcceeHHHHHHHHHHhCccc---CcEEEEEEEc
Confidence 468999999876 33 43 3578899999 887 8999888653
No 241
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=28.11 E-value=55 Score=30.44 Aligned_cols=39 Identities=21% Similarity=0.263 Sum_probs=27.2
Q ss_pred ChHHHHHHH-HhCCcEEEeccCCccccCChhhHhhCCceeec
Q 036427 435 GPGTIAEAM-IRGLPIILNDFIAGQEAGNVPYVVENGCGKFS 475 (536)
Q Consensus 435 G~~tllEAm-a~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~ 475 (536)
||...-|.+ +.|+|+|++.-..... .-+.+.+.|.|.++
T Consensus 79 GP~~ARE~l~~~~iP~IvI~D~p~~K--~kd~l~~~g~GYIi 118 (283)
T 1qv9_A 79 GPSKAREMLADSEYPAVIIGDAPGLK--VKDEMEEQGLGYIL 118 (283)
T ss_dssp HHHHHHHHHHTSSSCEEEEEEGGGGG--GHHHHHHTTCEEEE
T ss_pred CchHHHHHHHhCCCCEEEEcCCcchh--hHHHHHhcCCcEEE
Confidence 677777876 6899999876432221 23568889999865
No 242
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=28.08 E-value=93 Score=29.35 Aligned_cols=41 Identities=27% Similarity=0.442 Sum_probs=26.4
Q ss_pred CceEEEEeCCC-CchHH-HHHHHHHHHHHhccCCceEEEEeecccc
Q 036427 144 PKKVLILMSDT-GGGHR-ASAEAIKAAFHEKFGNEYQVFVTDLWSD 187 (536)
Q Consensus 144 ~mKIL~~~~~~-GgGh~-~~~l~La~~L~~~~g~g~eV~v~~~~~~ 187 (536)
|||||++.++. ++|.. .-+..+++.+.+. |++|.+.++...
T Consensus 2 MmkiLiI~gSpr~~s~t~~la~~~~~~l~~~---g~eV~~~dL~~~ 44 (273)
T 1d4a_A 2 GRRALIVLAHSERTSFNYAMKEAAAAALKKK---GWEVVESDLYAM 44 (273)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHT---TCEEEEEETTTT
T ss_pred CCEEEEEEeCCCCccHHHHHHHHHHHHHHhC---CCeEEEEEcccc
Confidence 57999987553 23433 3344556667765 788988887543
No 243
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=28.07 E-value=3.5e+02 Score=24.76 Aligned_cols=148 Identities=14% Similarity=0.087 Sum_probs=68.1
Q ss_pred HHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEcCHHHH----HHHHHhCCCCC
Q 036427 242 LMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVA----KRAMKAGLQAS 317 (536)
Q Consensus 242 l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~~~~----~~l~~~g~~~~ 317 (536)
+...++|-|+........-.+..+.. + +|+|.+-.+.. ....+.|.+-..... +.+.+.| ..
T Consensus 62 l~~~~vdgiIi~~~~~~~~~~~~~~~-~----iPvV~i~~~~~-------~~~~~~V~~D~~~~~~~a~~~L~~~G--~~ 127 (289)
T 3k9c_A 62 LMRERCEAAILLGTRFDTDELGALAD-R----VPALVVARASG-------LPGVGAVRGDDVAGITLAVDHLTELG--HR 127 (289)
T ss_dssp HTTTTEEEEEEETCCCCHHHHHHHHT-T----SCEEEESSCCS-------STTSEEEEECHHHHHHHHHHHHHHTT--CC
T ss_pred HHhCCCCEEEEECCCCCHHHHHHHHc-C----CCEEEEcCCCC-------CCCCCEEEeChHHHHHHHHHHHHHCC--CC
Confidence 45568998887654332211222222 3 89887755432 122334444333333 3344444 45
Q ss_pred CEEEeCCCCCCCCCCCCCch-H---HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEec
Q 036427 318 QIKVYGLPVRPSFVKPVRPK-V---ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICG 393 (536)
Q Consensus 318 ki~vignpv~~~~~~~~~~~-~---~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G 393 (536)
+|-+++.+... ....+ + +..++.|++.+. .+ +. +.. ........+.+.+. ..++...++. .
T Consensus 128 ~I~~i~~~~~~----~~~~R~~Gf~~al~~~g~~~~~-~~-~~-~~~---~~~~~~~~~~~~l~----~~~~~~ai~~-~ 192 (289)
T 3k9c_A 128 NIAHIDGADAP----GGADRRAGFLAAMDRHGLSASA-TV-VT-GGT---TETEGAEGMHTLLE----MPTPPTAVVA-F 192 (289)
T ss_dssp SEEEECCTTST----THHHHHHHHHHHHHHTTCGGGE-EE-EC-CCS---SHHHHHHHHHHHHT----SSSCCSEEEE-S
T ss_pred cEEEEeCCCCc----cHHHHHHHHHHHHHHCCCCCCc-cE-EE-CCC---CHHHHHHHHHHHHc----CCCCCCEEEE-C
Confidence 78777654322 11111 1 223345654322 22 22 222 22333344444333 1334444443 3
Q ss_pred CCH---HHHHHHHcCCCC--CCEEEecChh
Q 036427 394 RNK---KLANKLLSTDWK--IPVQVKGFVS 418 (536)
Q Consensus 394 ~~~---~l~~~l~~~~~~--~~V~~~G~v~ 418 (536)
... ...+.+++.++. +.|.++|+-+
T Consensus 193 ~d~~A~g~~~al~~~g~~vP~di~vig~D~ 222 (289)
T 3k9c_A 193 NDRCATGVLDLLVRSGRDVPADISVVGYDD 222 (289)
T ss_dssp SHHHHHHHHHHHHHTTCCTTTTCEEEEEEC
T ss_pred ChHHHHHHHHHHHHcCCCCCCceEEEEECC
Confidence 322 244566666654 7899999753
No 244
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=28.06 E-value=39 Score=33.34 Aligned_cols=40 Identities=15% Similarity=0.301 Sum_probs=28.8
Q ss_pred CCceEEEEeCCCCchHH---HHHHHHHHHHHhccCCceEEEEeecc
Q 036427 143 QPKKVLILMSDTGGGHR---ASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~---~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
++|||+++.+|...=|. ..+..++++|.+. |++|++++..
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~---g~~v~~i~~~ 44 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKD---KYHVDIIYIT 44 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTT---TEEEEEEEEC
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhc---CCEEEEEEEc
Confidence 46899999976522233 4567888999888 8999887653
No 245
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=28.02 E-value=1.3e+02 Score=24.95 Aligned_cols=36 Identities=14% Similarity=0.333 Sum_probs=27.3
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEE-Ee
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVF-VT 182 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~-v~ 182 (536)
+..||++.+.+- -+|.....-++..|+.. |++|+ +.
T Consensus 2 ~~~~vvla~~~~-d~HdiG~~~v~~~l~~~---G~~Vi~lG 38 (137)
T 1ccw_A 2 EKKTIVLGVIGS-DCHAVGNKILDHAFTNA---GFNVVNIG 38 (137)
T ss_dssp CCCEEEEEEETT-CCCCHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CCCEEEEEeCCC-chhHHHHHHHHHHHHHC---CCEEEECC
Confidence 345888887554 48888888888888888 88886 44
No 246
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=27.99 E-value=82 Score=27.16 Aligned_cols=31 Identities=23% Similarity=0.038 Sum_probs=22.9
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhc
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~ 172 (536)
.++++||||+|.+- -.-.-.|..+.+.+...
T Consensus 4 ~~~~~~VLFVCtgN-~cRSpmAEal~~~~~~~ 34 (161)
T 1d1q_A 4 EKPKISVAFIALGN-FCRSPMAEAIFKHEVEK 34 (161)
T ss_dssp CSCCEEEEEEESSS-SSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCc-HHHHHHHHHHHHHHHHH
Confidence 44668999999764 46677777788877764
No 247
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=27.97 E-value=95 Score=25.75 Aligned_cols=37 Identities=16% Similarity=0.156 Sum_probs=26.1
Q ss_pred CCceEEEEeCCC--CchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 143 QPKKVLILMSDT--GGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 143 ~~mKIL~~~~~~--GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
+++|++|+...- +......++.+|...... |++|.+.
T Consensus 14 ~~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~---g~eV~vF 52 (134)
T 3mc3_A 14 QXXXILIVVTHGPEDLDRTYAPLFMASISASM---EYETSVF 52 (134)
T ss_dssp CCCEEEEEECCCGGGTHHHHHHHHHHHHHHHT---TCEEEEE
T ss_pred ccceEEEEEccCCCCHHHHHHHHHHHHHHHHC---CCCEEEE
Confidence 457888876442 457778888899888887 6666543
No 248
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=27.95 E-value=3.7e+02 Score=25.03 Aligned_cols=23 Identities=9% Similarity=0.345 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHhhCCCEEEEcCc
Q 036427 233 FIAREVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 233 ~~~~~l~~~l~~~kPDvVi~~~~ 255 (536)
.....+.++|++++||+|+++.+
T Consensus 132 ~~~~~l~~~ir~~~PdvV~t~~~ 154 (270)
T 3dfi_A 132 AIREDIESMIAECDPTLVLTCVA 154 (270)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEeCCC
Confidence 45678888999999999999754
No 249
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=27.89 E-value=41 Score=30.13 Aligned_cols=41 Identities=5% Similarity=0.065 Sum_probs=23.1
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
|++||++++++.=-|. ....|++.+.+..+.++++.+.++.
T Consensus 1 M~k~I~vi~GS~R~~S--~~~~la~~~~~~~~~~~~~~~idl~ 41 (190)
T 3u7r_A 1 MVKTVAVMVGSLRKDS--LNHKLMKVLQKLAEGRLEFHLLHIG 41 (190)
T ss_dssp -CEEEEEEESCCSTTC--HHHHHHHHHHHHHTTTEEEEECCGG
T ss_pred CCCEEEEEECCCCCCC--HHHHHHHHHHHhccCCCEEEEEecc
Confidence 4678998876531121 2223444454444448898888763
No 250
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=27.89 E-value=49 Score=33.16 Aligned_cols=44 Identities=14% Similarity=0.107 Sum_probs=29.4
Q ss_pred CCCCCCceEEEEeCCCCchH---HHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 139 IENDQPKKVLILMSDTGGGH---RASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 139 ~~~~~~mKIL~~~~~~GgGh---~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
+..|++|||+++++|.-.=| ...+..++++|.+. +++|+.++..
T Consensus 32 ~~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~---~~~v~~i~i~ 78 (383)
T 3k3p_A 32 RGSMSKETLVLLYGGRSAERDVSVLSAESVMRAINYD---NFLVKTYFIT 78 (383)
T ss_dssp -----CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTT---TEEEEEEEEC
T ss_pred cccccCCeEEEEeCCCCCcchHHHHHHHHHHHHhhhc---CCEEEEEEec
Confidence 44566789999997752223 36788888888877 8999887653
No 251
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=27.87 E-value=68 Score=28.12 Aligned_cols=62 Identities=15% Similarity=0.182 Sum_probs=35.6
Q ss_pred hHHHHHhhcCeEEE-CCChHHHH---HHHH-------hCCcEEEeccCCccccCChhhHhhC--------CceeecCCHH
Q 036427 419 KMEEAMGACDCIIT-KAGPGTIA---EAMI-------RGLPIILNDFIAGQEAGNVPYVVEN--------GCGKFSKSPK 479 (536)
Q Consensus 419 ~l~~ll~~aDv~V~-~sG~~tll---EAma-------~GlPVI~~~~~~~~e~~na~~lv~~--------g~g~~~~d~~ 479 (536)
.-.-+...||.+|. |+|.+|+- |++. .++| |..+ ...... +++. ..-.+++|++
T Consensus 90 Rk~~~~~~sda~ivlpGG~GTl~El~e~lt~~q~g~~~~kP-vll~-g~~~~l-----~~~~gfi~~~~~~~~~~~~~~~ 162 (171)
T 1weh_A 90 RIGRLLDLGAGYLALPGGVGTLAELVLAWNLLYLRRGVGRP-LAVD-PYWLGL-----LKAHGEIAPEDVGLLRVVADEE 162 (171)
T ss_dssp HHHHHHHHEEEEEECSCCHHHHHHHHHHHHHHHTCSSCSCC-EEEC-GGGGGT-----CCCBTTBCHHHHTTSEECCSHH
T ss_pred HHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhCccCCCe-EEEC-cchhhh-----HhhcCCCChhhcCeEEEeCCHH
Confidence 44556678998665 55667764 5666 5899 8877 221111 1111 1223445888
Q ss_pred HHHHHHHH
Q 036427 480 EIANMVSQ 487 (536)
Q Consensus 480 ~La~~I~~ 487 (536)
++.+.+++
T Consensus 163 e~~~~l~~ 170 (171)
T 1weh_A 163 DLRRFLRS 170 (171)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 88777654
No 252
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=27.82 E-value=61 Score=29.97 Aligned_cols=39 Identities=21% Similarity=0.234 Sum_probs=30.1
Q ss_pred CceEEEEeC-CCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMS-DTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~-~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
+|||+.+++ .-|-|-...+..||..|.++ |..|.++|..
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~---g~~VlliD~D 44 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARL---GKRVLLVDLD 44 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHT---TCCEEEEECC
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHC---CCCEEEEECC
Confidence 356555554 44558899999999999998 8899999864
No 253
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=27.61 E-value=2e+02 Score=24.94 Aligned_cols=37 Identities=19% Similarity=0.240 Sum_probs=22.8
Q ss_pred CCCceEEEEeCC--CCchHHHHHHHHHHHHHhccCCceEEEE
Q 036427 142 DQPKKVLILMSD--TGGGHRASAEAIKAAFHEKFGNEYQVFV 181 (536)
Q Consensus 142 ~~~mKIL~~~~~--~GgGh~~~~l~La~~L~~~~g~g~eV~v 181 (536)
.+++|+.+++.+ .|--...-...|++.|.+. |+++.-
T Consensus 8 ~~~~~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~---G~~v~~ 46 (172)
T 1mkz_A 8 FIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEA---GHHVVD 46 (172)
T ss_dssp CCCCEEEEEEECSSCCGGGCHHHHHHHHHHHHT---TCEEEE
T ss_pred CCCCEEEEEEEeCCCCcccCccHHHHHHHHHHC---CCeEeE
Confidence 356799988643 3222334445678888887 777643
No 254
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=27.54 E-value=62 Score=37.27 Aligned_cols=40 Identities=25% Similarity=0.292 Sum_probs=29.5
Q ss_pred CCCceEEEEeCCC---C--chHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 142 DQPKKVLILMSDT---G--GGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 142 ~~~mKIL~~~~~~---G--gGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.+.+|||++..|. | .=+...+..++++|++. |++|++++.
T Consensus 5 ~~~~kIlIig~G~i~ig~a~E~d~sg~~~~~al~~~---G~~vv~v~~ 49 (1073)
T 1a9x_A 5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREE---GYRVINVNS 49 (1073)
T ss_dssp SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHH---TCEEEEECS
T ss_pred CCCCEEEEECCCcccccccccccchHHHHHHHHHHc---CCEEEEEeC
Confidence 4568999997663 1 22445677899999998 899988864
No 255
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=27.49 E-value=1.1e+02 Score=24.70 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=22.8
Q ss_pred CceEEEEe-CCCCchHHHH-HHHHHHHHHhccCCceEEEEe
Q 036427 144 PKKVLILM-SDTGGGHRAS-AEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 144 ~mKIL~~~-~~~GgGh~~~-~l~La~~L~~~~g~g~eV~v~ 182 (536)
+|||+.++ .++|--|... +..|-++-++. |+++.|-
T Consensus 2 ~mkivaVtaCptGiAhTymAAeaLekaA~~~---G~~ikVE 39 (106)
T 2m1z_A 2 KRKIIAVTACATGVAHTYMAAQALKKGAKKM---GNLIKVE 39 (106)
T ss_dssp CCEEEEEEECSSCHHHHHHHHHHHHHHHHHH---TCEEEEE
T ss_pred CccEEEEEECCCcHHHHHHHHHHHHHHHHHC---CCEEEEE
Confidence 47877665 5676677777 44665666566 5566543
No 256
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=27.41 E-value=46 Score=30.96 Aligned_cols=38 Identities=24% Similarity=0.312 Sum_probs=29.0
Q ss_pred CceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
++||+.+++. -|-|-...+..||.+|. + |..|.++|..
T Consensus 26 ~~~vI~v~s~kGGvGKTT~a~~LA~~la-~---g~~VlliD~D 64 (267)
T 3k9g_A 26 KPKIITIASIKGGVGKSTSAIILATLLS-K---NNKVLLIDMD 64 (267)
T ss_dssp CCEEEEECCSSSSSCHHHHHHHHHHHHT-T---TSCEEEEEEC
T ss_pred CCeEEEEEeCCCCchHHHHHHHHHHHHH-C---CCCEEEEECC
Confidence 4566555544 44589999999999999 7 7899999864
No 257
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=27.24 E-value=50 Score=29.20 Aligned_cols=35 Identities=17% Similarity=0.081 Sum_probs=24.7
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
++|||++..+|- .|.. .+..|.+.|++. |++|.++
T Consensus 4 m~k~IllgvTGs-~aa~-k~~~ll~~L~~~---g~~V~vv 38 (175)
T 3qjg_A 4 MGENVLICLCGS-VNSI-NISHYIIELKSK---FDEVNVI 38 (175)
T ss_dssp -CCEEEEEECSS-GGGG-GHHHHHHHHTTT---CSEEEEE
T ss_pred CCCEEEEEEeCH-HHHH-HHHHHHHHHHHC---CCEEEEE
Confidence 347899887664 3444 477899999998 6777554
No 258
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=27.07 E-value=3.9e+02 Score=24.96 Aligned_cols=38 Identities=18% Similarity=0.244 Sum_probs=24.7
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
|++...|.++=+|.| | ++.++.+.+..|+..-+++.|.
T Consensus 4 ~~~~~pIgvfDSGvG-G-----Ltv~~~i~~~lp~~~~iy~~D~ 41 (268)
T 3out_A 4 MLDNRPIGVFDSGIG-G-----LTIVKNLMSILPNEDIIYFGDI 41 (268)
T ss_dssp -CTTSCEEEEESSST-T-----HHHHHHHHHHCTTCCEEEEECT
T ss_pred cCCCCcEEEEECCCC-h-----HHHHHHHHHHCCCCcEEEecCC
Confidence 444567999999994 3 3344566666676556677775
No 259
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=26.89 E-value=4.2e+02 Score=25.21 Aligned_cols=39 Identities=10% Similarity=0.138 Sum_probs=21.6
Q ss_pred CCceEEEEeCCCCch-HHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 143 QPKKVLILMSDTGGG-HRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 143 ~~mKIL~~~~~~GgG-h~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
+..+|.++..+.... .......+.+++.+. |+++.+.+.
T Consensus 69 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~---g~~~~~~~~ 108 (355)
T 3e3m_A 69 RSGFVGLLLPSLNNLHFAQTAQSLTDVLEQG---GLQLLLGYT 108 (355)
T ss_dssp --CEEEEEESCSBCHHHHHHHHHHHHHHHHT---TCEEEEEEC
T ss_pred CCCEEEEEeCCCCchHHHHHHHHHHHHHHHC---CCEEEEEeC
Confidence 446788888765222 223334455566665 788877643
No 260
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=26.83 E-value=2.2e+02 Score=22.59 Aligned_cols=62 Identities=15% Similarity=0.104 Sum_probs=37.4
Q ss_pred cCeEEECC----C--hHHHHHHHHh-----CCcEEEeccCCccccCChhhHhhCCcee-ecC--CHHHHHHHHHHHhC
Q 036427 427 CDCIITKA----G--PGTIAEAMIR-----GLPIILNDFIAGQEAGNVPYVVENGCGK-FSK--SPKEIANMVSQWFG 490 (536)
Q Consensus 427 aDv~V~~s----G--~~tllEAma~-----GlPVI~~~~~~~~e~~na~~lv~~g~g~-~~~--d~~~La~~I~~ll~ 490 (536)
.|++|+-- + +..+++.+.. .+|+|+.-.....+ ......+.|... +.. +.++|.++|..++.
T Consensus 51 ~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~--~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 126 (140)
T 3lua_A 51 ITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTPVIIATKSDNPG--YRHAALKFKVSDYILKPYPTKRLENSVRSVLK 126 (140)
T ss_dssp CSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCCEEEEESCCCHH--HHHHHHHSCCSEEEESSCCTTHHHHHHHHHHC
T ss_pred CcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCCEEEEeCCCCHH--HHHHHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence 46666532 1 3455555443 78998876544332 223345566543 443 88999999999987
No 261
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=26.59 E-value=3.9e+02 Score=24.84 Aligned_cols=59 Identities=7% Similarity=-0.009 Sum_probs=34.3
Q ss_pred hcCeEEECCC--hHHHHHHHH-------hCCcEEEeccCCccccCChhhHhhCCceee-c---CCHHHHHHHHHHHhC
Q 036427 426 ACDCIITKAG--PGTIAEAMI-------RGLPIILNDFIAGQEAGNVPYVVENGCGKF-S---KSPKEIANMVSQWFG 490 (536)
Q Consensus 426 ~aDv~V~~sG--~~tllEAma-------~GlPVI~~~~~~~~e~~na~~lv~~g~g~~-~---~d~~~La~~I~~ll~ 490 (536)
..|+++..|. -..+++.+. .+++++++. ...++.+.+.|.... + .+.+.|.++|.+.+.
T Consensus 210 ~~d~v~ftS~~~v~~f~~~~~~~~~~~l~~~~i~aIG------~~Ta~~l~~~G~~~~~va~~~~~~~ll~al~~~~~ 281 (286)
T 1jr2_A 210 VPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIG------PTTARALAAQGLPVSCTAESPTPQALATGIRKALQ 281 (286)
T ss_dssp SCSEEEESSHHHHHHHHHHHHHHHGGGGGGSEEEESS------HHHHHHHHHTTCCCSEECSSSSHHHHHHHHHHHTC
T ss_pred CCCEEEEEChHHHHHHHHHHhhhccccccCCEEEEEC------HHHHHHHHHcCCCceEecCCCCHHHHHHHHHHHHh
Confidence 3688887774 223344332 245566543 113555677775432 2 278899999888776
No 262
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=26.19 E-value=4.2e+02 Score=25.01 Aligned_cols=39 Identities=13% Similarity=0.138 Sum_probs=22.6
Q ss_pred CCceEEEEeCCCCc-hHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 143 QPKKVLILMSDTGG-GHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 143 ~~mKIL~~~~~~Gg-Gh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
+..+|.++..+... -.......+.+++.+. |+++.+.+.
T Consensus 67 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~---g~~~~~~~~ 106 (344)
T 3kjx_A 67 RVNLVAVIIPSLSNMVFPEVLTGINQVLEDT---ELQPVVGVT 106 (344)
T ss_dssp CCSEEEEEESCSSSSSHHHHHHHHHHHHTSS---SSEEEEEEC
T ss_pred CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHC---CCEEEEEeC
Confidence 45689998866422 1233334455556555 788877643
No 263
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=26.18 E-value=64 Score=30.04 Aligned_cols=33 Identities=15% Similarity=0.229 Sum_probs=22.8
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
||||||++.. | .....|++.|.++ |++|++.+.
T Consensus 4 m~~~ilVtGa--G----~iG~~l~~~L~~~---g~~V~~~~r 36 (286)
T 3ius_A 4 MTGTLLSFGH--G----YTARVLSRALAPQ---GWRIIGTSR 36 (286)
T ss_dssp -CCEEEEETC--C----HHHHHHHHHHGGG---TCEEEEEES
T ss_pred CcCcEEEECC--c----HHHHHHHHHHHHC---CCEEEEEEc
Confidence 4578888742 2 3445578889888 788888765
No 264
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=26.12 E-value=4.5e+02 Score=25.34 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=26.2
Q ss_pred CceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 144 PKKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 144 ~mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
||||.++++| --.|--.....+.+..... +++|+-.
T Consensus 1 mkrIgIltsGG~~pG~Na~ir~vv~~a~~~---g~~v~Gi 37 (319)
T 4a3s_A 1 MKRIGVLTSGGDSPGMNAAVRAVVRKAIYH---DVEVYGI 37 (319)
T ss_dssp CCEEEEEEESSCCTTHHHHHHHHHHHHHHT---TCEEEEE
T ss_pred CCEEEEECcCCCcHHHHHHHHHHHHHHHHC---CCEEEEE
Confidence 5799999854 2267778888888877765 6777654
No 265
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=26.09 E-value=77 Score=30.16 Aligned_cols=43 Identities=19% Similarity=0.171 Sum_probs=30.9
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
..+++||+.++..-|-|-...+..||.+|.++ |..|.++|...
T Consensus 37 ~~~~~~vI~v~~KGGvGKTT~a~nLA~~La~~---G~~VlliD~D~ 79 (307)
T 3end_A 37 KITGAKVFAVYGKGGIGKSTTSSNLSAAFSIL---GKRVLQIGCDP 79 (307)
T ss_dssp ---CCEEEEEECSTTSSHHHHHHHHHHHHHHT---TCCEEEEEESS
T ss_pred ccCCceEEEEECCCCccHHHHHHHHHHHHHHC---CCeEEEEeCCC
Confidence 34455655555444458999999999999998 88999998753
No 266
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=26.03 E-value=68 Score=31.46 Aligned_cols=40 Identities=8% Similarity=0.121 Sum_probs=33.0
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
.++||+|+++.-|-|-...+.+||..|.+. |..|.++|..
T Consensus 14 ~~~~i~~~sgkGGvGKTt~a~~lA~~la~~---g~~vllid~D 53 (334)
T 3iqw_A 14 RSLRWIFVGGKGGVGKTTTSCSLAIQLAKV---RRSVLLLSTD 53 (334)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHTTS---SSCEEEEECC
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHhC---CCcEEEEECC
Confidence 457888887666669999999999999998 8889888754
No 267
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=25.85 E-value=47 Score=31.95 Aligned_cols=32 Identities=13% Similarity=0.096 Sum_probs=25.5
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
+|||+++.++ .+..+++++++. |++|++++..
T Consensus 2 ~m~Ililg~g-------~~~~l~~a~~~~---G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYASH-------SALQILKGAKDE---GFETIAFGSS 33 (334)
T ss_dssp CSEEEEESST-------THHHHHHHHHHT---TCCEEEESCG
T ss_pred ceEEEEECCh-------hHHHHHHHHHhC---CCEEEEEECC
Confidence 5799998765 567788999998 8899888753
No 268
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=25.83 E-value=1.1e+02 Score=25.22 Aligned_cols=32 Identities=19% Similarity=0.107 Sum_probs=24.4
Q ss_pred ceEEEEeCC--CCchHHHHHHHHHHHHHhccCCceEE
Q 036427 145 KKVLILMSD--TGGGHRASAEAIKAAFHEKFGNEYQV 179 (536)
Q Consensus 145 mKIL~~~~~--~GgGh~~~~l~La~~L~~~~g~g~eV 179 (536)
||++|+..+ .|.-..+.++.++.++.+. |++|
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~---g~~v 34 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEK---GHEI 34 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHT---TCEE
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhc---CCee
Confidence 688887643 5456778899999999998 5565
No 269
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=25.78 E-value=87 Score=24.47 Aligned_cols=30 Identities=10% Similarity=0.298 Sum_probs=17.5
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEE
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFV 181 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v 181 (536)
++||+++-.+. .....+...|.+. |++|..
T Consensus 2 ~~~ilivdd~~-----~~~~~l~~~l~~~---g~~v~~ 31 (127)
T 2jba_A 2 ARRILVVEDEA-----PIREMVCFVLEQN---GFQPVE 31 (127)
T ss_dssp CCEEEEECSCH-----HHHHHHHHHHHHT---TCEEEE
T ss_pred CcEEEEEcCCH-----HHHHHHHHHHHHC---CceEEE
Confidence 46787776553 3344456666665 666544
No 270
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=25.61 E-value=61 Score=28.34 Aligned_cols=32 Identities=13% Similarity=0.170 Sum_probs=17.7
Q ss_pred CCCCCCCceEEEEeCCCCchHHHHHHHHHHHHH
Q 036427 138 GIENDQPKKVLILMSDTGGGHRASAEAIKAAFH 170 (536)
Q Consensus 138 ~~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~ 170 (536)
...+.+|+||||+|.+- -.-.-.|..|.+.+.
T Consensus 16 ~~~~~mm~~VLFVCtgN-~cRSpmAEal~r~~~ 47 (167)
T 2fek_A 16 PRGSHMFNNILVVCVGN-ICRSPTAERLLQRYH 47 (167)
T ss_dssp -----CCCEEEEEESSS-SSHHHHHHHHHHHHC
T ss_pred cchhcccCeEEEEcCCc-HHHHHHHHHHHHHhc
Confidence 33444567999999764 355555555555553
No 271
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=25.51 E-value=60 Score=30.33 Aligned_cols=35 Identities=14% Similarity=0.001 Sum_probs=23.8
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
|++||||++. .| .....|++.|.++ |++|++++..
T Consensus 1 M~~~~ilVtG--aG----~iG~~l~~~L~~~---g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIAG--CG----DLGLELARRLTAQ---GHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEEC--CS----HHHHHHHHHHHHT---TCCEEEEECT
T ss_pred CCCCcEEEEC--CC----HHHHHHHHHHHHC---CCEEEEEeCC
Confidence 3467888873 32 3445678889888 7888887653
No 272
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=25.37 E-value=38 Score=32.17 Aligned_cols=37 Identities=16% Similarity=0.201 Sum_probs=26.9
Q ss_pred ceEEEEeCCCCchH---HHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 145 KKVLILMSDTGGGH---RASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 145 mKIL~~~~~~GgGh---~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
|||+|++.+. ... ...+..+++++++. |++|++++..
T Consensus 2 m~i~il~~~~-~~~~~~~~s~~~l~~a~~~~---G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPI-ANINIKKDSSFAMLLEAQRR---GYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCG-GGCCTTTCHHHHHHHHHHHT---TCEEEEECGG
T ss_pred ceEEEEeCcH-HhCCcCCChHHHHHHHHHHC---CCEEEEEchh
Confidence 7999998763 111 13456789999998 8999988753
No 273
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=25.30 E-value=60 Score=31.35 Aligned_cols=54 Identities=17% Similarity=0.340 Sum_probs=34.1
Q ss_pred HHhhcCeEEECCChHHHHHHHHh----CCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 423 AMGACDCIITKAGPGTIAEAMIR----GLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 423 ll~~aDv~V~~sG~~tllEAma~----GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
.-..+|++|+-+|-+|+++++.. ++|++.++.+. .|++.+ .++++.++++.+++
T Consensus 72 ~~~~~d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G~--------------~gfl~~~~~~~~~~~~~~i~~ 130 (307)
T 1u0t_A 72 AADGCELVLVLGGDGTFLRAAELARNASIPVLGVNLGR--------------IGFLAEAEAEAIDAVLEHVVA 130 (307)
T ss_dssp ----CCCEEEEECHHHHHHHHHHHHHHTCCEEEEECSS--------------CCSSCSEEGGGHHHHHHHHHH
T ss_pred cccCCCEEEEEeCCHHHHHHHHHhccCCCCEEEEeCCC--------------CccCcccCHHHHHHHHHHHHc
Confidence 44578999998888888887643 89999987422 122222 45566667766664
No 274
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=25.13 E-value=96 Score=27.69 Aligned_cols=33 Identities=12% Similarity=0.243 Sum_probs=24.3
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
+||++.++|- .|.. .+..|.+.|++. |++|.++
T Consensus 2 k~IllgvTGs-~aa~-k~~~l~~~L~~~---g~~V~vv 34 (189)
T 2ejb_A 2 QKIALCITGA-SGVI-YGIKLLQVLEEL---DFSVDLV 34 (189)
T ss_dssp CEEEEEECSS-TTHH-HHHHHHHHHHHT---TCEEEEE
T ss_pred CEEEEEEECH-HHHH-HHHHHHHHHHHC---CCEEEEE
Confidence 6899887664 3544 677899999998 6777554
No 275
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=25.01 E-value=43 Score=32.03 Aligned_cols=43 Identities=14% Similarity=0.037 Sum_probs=23.6
Q ss_pred ccCCCCCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 135 PLNGIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 135 ~~~~~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
+-++..|+++|||.|+..|. ....++..|.+. |++|.+++...
T Consensus 6 ~~~~~~M~~~~~I~vIG~G~------mG~~~A~~l~~~---G~~V~~~dr~~ 48 (296)
T 3qha_A 6 TTNAAHTTEQLKLGYIGLGN------MGAPMATRMTEW---PGGVTVYDIRI 48 (296)
T ss_dssp ---------CCCEEEECCST------THHHHHHHHTTS---TTCEEEECSST
T ss_pred CCCcccccCCCeEEEECcCH------HHHHHHHHHHHC---CCeEEEEeCCH
Confidence 33344444568999996553 123467778877 78898887543
No 276
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=24.79 E-value=69 Score=27.40 Aligned_cols=29 Identities=24% Similarity=0.399 Sum_probs=18.2
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHh
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHE 171 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~ 171 (536)
.+|+||||+|.+- -.-.-.|..|.+.+..
T Consensus 18 ~~~~~VLFVC~gN-~cRSpmAEal~~~~~~ 46 (148)
T 3rh0_A 18 SHMKSVLFVCVGN-GGKSQMAAALAQKYAS 46 (148)
T ss_dssp --CCEEEEEESSS-SSHHHHHHHHHHHHCC
T ss_pred CCCCEEEEECCCc-hhHHHHHHHHHHHhcC
Confidence 3467999999764 3555666666666543
No 277
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=24.53 E-value=1.2e+02 Score=26.78 Aligned_cols=41 Identities=15% Similarity=0.269 Sum_probs=26.7
Q ss_pred CceEEEEeCCCC---chHH-HHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSDTG---GGHR-ASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~~G---gGh~-~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
|||||++.++.- +|.. ..+..+++.+.+. +.+++|.+.++.
T Consensus 1 M~kilii~gS~r~~~~s~t~~la~~~~~~~~~~-g~~~~v~~~dL~ 45 (208)
T 2hpv_A 1 MSKLLVVKAHPLTKEESRSVRALETFLASYRET-NPSDEIEILDVY 45 (208)
T ss_dssp -CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHH-CTTSEEEEEETT
T ss_pred CCeEEEEEecCCCCCCCHHHHHHHHHHHHHHHh-CCCCeEEEeeCC
Confidence 479999875531 3444 4445677788877 224899888876
No 278
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=24.51 E-value=2.3e+02 Score=29.18 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=23.4
Q ss_pred HHHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEE
Q 036427 236 REVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFT 277 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v 277 (536)
..+.+++++.+||++++...- ..++++.| ||++
T Consensus 391 ~el~~~i~~~~pDL~ig~~~~-----~~~a~k~g----IP~~ 423 (483)
T 3pdi_A 391 RVLLKTVDEYQADILIAGGRN-----MYTALKGR----VPFL 423 (483)
T ss_dssp HHHHHHHHHTTCSEEECCGGG-----HHHHHHTT----CCBC
T ss_pred HHHHHHHHhcCCCEEEECCch-----hHHHHHcC----CCEE
Confidence 367788999999999976432 23466666 8865
No 279
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=24.44 E-value=3e+02 Score=22.72 Aligned_cols=33 Identities=24% Similarity=0.178 Sum_probs=25.8
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
..+++++.+|+| ..+.+.+++.+.+. +.+|.+.
T Consensus 18 ~~~~llIaGG~G---iaPl~sm~~~l~~~---~~~v~l~ 50 (142)
T 3lyu_A 18 FGKILAIGAYTG---IVEVYPIAKAWQEI---GNDVTTL 50 (142)
T ss_dssp CSEEEEEEETTH---HHHHHHHHHHHHHT---TCEEEEE
T ss_pred CCeEEEEECcCc---HHHHHHHHHHHHhc---CCcEEEE
Confidence 368999999985 78899999999887 4456554
No 280
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=24.36 E-value=2e+02 Score=28.11 Aligned_cols=24 Identities=13% Similarity=0.041 Sum_probs=16.8
Q ss_pred HHHHHHhhCCCEEEEcCcccchHH
Q 036427 238 VAKGLMKYQPDIIISVHPLMQHVP 261 (536)
Q Consensus 238 l~~~l~~~kPDvVi~~~~~~~~i~ 261 (536)
+.+++.+.++|+|+...|...+..
T Consensus 80 ~~~ll~~~~vD~V~I~tp~~~H~~ 103 (361)
T 3u3x_A 80 AEEILEDENIGLIVSAAVSSERAE 103 (361)
T ss_dssp HHHHHTCTTCCEEEECCCHHHHHH
T ss_pred HHHHhcCCCCCEEEEeCChHHHHH
Confidence 345677778999998877655543
No 281
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=24.27 E-value=2.4e+02 Score=27.33 Aligned_cols=32 Identities=13% Similarity=0.106 Sum_probs=21.0
Q ss_pred HHHHHHhhCCCEEEEcCcccchHHHH-HHHHcC
Q 036427 238 VAKGLMKYQPDIIISVHPLMQHVPLR-ILRAKG 269 (536)
Q Consensus 238 l~~~l~~~kPDvVi~~~~~~~~i~~~-~~~~~g 269 (536)
+.++|.+.++|+|+...|...+..+. .+-..|
T Consensus 86 ~~ell~~~~iDaV~IatP~~~H~~~a~~al~aG 118 (393)
T 4fb5_A 86 WRALIADPEVDVVSVTTPNQFHAEMAIAALEAG 118 (393)
T ss_dssp HHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTT
T ss_pred HHHHhcCCCCcEEEECCChHHHHHHHHHHHhcC
Confidence 44668888999999888776655433 233445
No 282
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=24.21 E-value=1.2e+02 Score=27.80 Aligned_cols=40 Identities=23% Similarity=0.305 Sum_probs=27.6
Q ss_pred CceEEEEeCCC-Cch-HHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 144 PKKVLILMSDT-GGG-HRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 144 ~mKIL~~~~~~-GgG-h~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
.||||++.++. .++ ...-+..+++.+.+. |++|.+.++..
T Consensus 1 ~mkiLiI~gspr~~S~t~~l~~~~~~~l~~~---g~ev~~~dL~~ 42 (228)
T 3tem_A 1 GKKVLIVYAHQEPKSFNGSLKNVAVDELSRQ---GCTVTVSDLYA 42 (228)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHH---TCEEEEEETTT
T ss_pred CCEEEEEEeCCCCCCHHHHHHHHHHHHHHHC---CCEEEEEEhhh
Confidence 37999987542 223 345556677788877 78999988754
No 283
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=24.14 E-value=93 Score=28.47 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=28.1
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
|+.|.|...++|-|-...+..|+++|+++ |..|...
T Consensus 4 mk~i~Itgt~t~vGKT~vt~~L~~~l~~~---G~~V~~~ 39 (228)
T 3of5_A 4 MKKFFIIGTDTEVGKTYISTKLIEVCEHQ---NIKSLCL 39 (228)
T ss_dssp CEEEEEEESSSSSCHHHHHHHHHHHHHHT---TCCEEEE
T ss_pred CcEEEEEeCCCCCCHHHHHHHHHHHHHHC---CCeeEEe
Confidence 33455555778889999999999999999 7777554
No 284
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=23.94 E-value=3.9e+02 Score=23.93 Aligned_cols=20 Identities=15% Similarity=0.112 Sum_probs=16.5
Q ss_pred HHHHHHHHhhCCCEEEEcCc
Q 036427 236 REVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~~~ 255 (536)
..+.+.+++++||+|++.+.
T Consensus 69 ~~~~~~l~~~~~Dliv~a~y 88 (209)
T 1meo_A 69 SAIDLVLEEFSIDIVCLAGF 88 (209)
T ss_dssp HHHHHHHHHTTCCEEEEESC
T ss_pred HHHHHHHHhcCCCEEEEcch
Confidence 46778899999999998764
No 285
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=23.89 E-value=76 Score=26.45 Aligned_cols=27 Identities=19% Similarity=0.218 Sum_probs=17.7
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHh
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHE 171 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~ 171 (536)
|+||||+|.+- -.-.-.|..+.+.+..
T Consensus 4 m~~VLFVC~gN-~cRSpmAEa~~~~~~~ 30 (134)
T 2l17_A 4 MKKVMFVCKRN-SCRSQMAEGFAKTLGA 30 (134)
T ss_dssp CEEEEEECCSS-THHHHHHHHHHHHHSB
T ss_pred CCEEEEEeCCc-hHHHHHHHHHHHHHcC
Confidence 46999999764 3555556666665543
No 286
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=23.73 E-value=2.9e+02 Score=22.30 Aligned_cols=62 Identities=11% Similarity=0.124 Sum_probs=35.6
Q ss_pred cCeEEECC----C-hHHHHHHHH---hCCcEEEeccCCccccCChhhHhhCCcee-ecC--CHHHHHHHHHHHhC
Q 036427 427 CDCIITKA----G-PGTIAEAMI---RGLPIILNDFIAGQEAGNVPYVVENGCGK-FSK--SPKEIANMVSQWFG 490 (536)
Q Consensus 427 aDv~V~~s----G-~~tllEAma---~GlPVI~~~~~~~~e~~na~~lv~~g~g~-~~~--d~~~La~~I~~ll~ 490 (536)
.|++|+-. . +..+++.+. ..+|+|++-.....+ ......+.|+.. +.. +.++|...|..++.
T Consensus 48 ~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~--~~~~~~~~g~~~~l~kP~~~~~L~~~i~~~~~ 120 (155)
T 1qkk_A 48 AGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGDIP--MAVQAIQDGAYDFIAKPFAADRLVQSARRAEE 120 (155)
T ss_dssp CSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGGHH--HHHHHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCChH--HHHHHHhcCCCeEEeCCCCHHHHHHHHHHHHH
Confidence 46666532 1 344455443 378888875433222 223344556544 333 89999999998886
No 287
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=23.73 E-value=73 Score=30.22 Aligned_cols=39 Identities=10% Similarity=0.256 Sum_probs=29.0
Q ss_pred CCceEEEEeCCCC---chHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 143 QPKKVLILMSDTG---GGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 143 ~~mKIL~~~~~~G---gGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.+|||+++++|.- --....+..++++|.+. |++|+.++.
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~---g~~v~~i~~ 43 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKN---KYEIVPITL 43 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHHHHSCTT---TEEEEEEEC
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHHHHHHHHHC---CCEEEEEcc
Confidence 4689999997751 12245577888999888 899988875
No 288
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=23.71 E-value=97 Score=26.65 Aligned_cols=30 Identities=20% Similarity=0.134 Sum_probs=21.2
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEK 172 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~ 172 (536)
|++|||||+|.+- -.-.-.|..+.+.+...
T Consensus 3 ~~~~~vLFVC~gN-~cRSpmAE~~~~~~~~~ 32 (157)
T 3n8i_A 3 QATKSVLFVCLGN-ICRSPIAEAVFRKLVTD 32 (157)
T ss_dssp -CCEEEEEEESSS-SSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCc-hhHHHHHHHHHHHHHHH
Confidence 4578999999764 36666777777777654
No 289
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=23.45 E-value=99 Score=27.61 Aligned_cols=38 Identities=13% Similarity=0.091 Sum_probs=30.9
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
|.|.|....-|-|-...+..||..|.++ | .|.++|...
T Consensus 1 kvI~v~s~KGGvGKTT~a~~LA~~la~~---g-~VlliD~D~ 38 (209)
T 3cwq_A 1 MIITVASFKGGVGKTTTAVHLSAYLALQ---G-ETLLIDGDP 38 (209)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHTT---S-CEEEEEECT
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHHHhc---C-CEEEEECCC
Confidence 4577776665669999999999999998 8 999998743
No 290
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=23.31 E-value=2.1e+02 Score=28.44 Aligned_cols=32 Identities=19% Similarity=0.103 Sum_probs=21.0
Q ss_pred HHHHHHhhCCCEEEEcCcccchHHHH-HHHHcC
Q 036427 238 VAKGLMKYQPDIIISVHPLMQHVPLR-ILRAKG 269 (536)
Q Consensus 238 l~~~l~~~kPDvVi~~~~~~~~i~~~-~~~~~g 269 (536)
+.++|++.++|+|++..|...+..+. .+-..|
T Consensus 88 ~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aG 120 (412)
T 4gqa_A 88 WRELVNDPQVDVVDITSPNHLHYTMAMAAIAAG 120 (412)
T ss_dssp HHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTT
T ss_pred HHHHhcCCCCCEEEECCCcHHHHHHHHHHHHcC
Confidence 44668888999999888776654333 233445
No 291
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=23.31 E-value=92 Score=27.52 Aligned_cols=38 Identities=16% Similarity=0.173 Sum_probs=21.9
Q ss_pred CceEEEEeCCC-CchHH-HHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSDT-GGGHR-ASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~~-GgGh~-~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
||||+++.++. .+|.. .-+..+++.+. . +++|.+.++.
T Consensus 2 M~kilii~gS~r~~s~t~~la~~~~~~~~-~---~~~v~~~dl~ 41 (192)
T 3fvw_A 2 SKRILFIVGSFSEGSFNRQLAKKAETIIG-D---RAQVSYLSYD 41 (192)
T ss_dssp -CEEEEEESCCSTTCHHHHHHHHHHHHHT-T---SSEEEECCCS
T ss_pred CCEEEEEEcCCCCCCHHHHHHHHHHHhcC-C---CCEEEEEeCc
Confidence 67999997653 23333 33334444443 3 7888888774
No 292
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=23.19 E-value=59 Score=32.40 Aligned_cols=118 Identities=16% Similarity=0.141 Sum_probs=64.2
Q ss_pred CCCCCCEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEecCCHHHHHH---HHcCCCC----CCEEEecChh
Q 036427 346 MDEDLPAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVICGRNKKLANK---LLSTDWK----IPVQVKGFVS 418 (536)
Q Consensus 346 i~~~~~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~G~~~~l~~~---l~~~~~~----~~V~~~G~v~ 418 (536)
+....+.|++++... .....+.+..+.+.|.+ .++.++ +- ++..+. ....... ....+..
T Consensus 34 w~~~~k~I~iv~K~~-~~~~~~~~~~l~~~L~~-----~~~~V~-ve---~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 100 (365)
T 3pfn_A 34 WNKSPKSVLVIKKMR-DASLLQPFKELCTHLME-----ENMIVY-VE---KKVLEDPAIASDESFGAVKKKFCTFRE--- 100 (365)
T ss_dssp ESSCCCEEEEEECTT-CGGGHHHHHHHHHHHHH-----TSCEEE-EE---HHHHHSHHHHHCSTTHHHHHHCEEECT---
T ss_pred cCCCCCEEEEEecCC-CHHHHHHHHHHHHHHHH-----CCCEEE-Ee---hHHhhhhcccccccccccccccccccc---
Confidence 333445677776643 34556777777777763 345433 31 112121 1110000 0112211
Q ss_pred hHHHHHhhcCeEEECCChHHHHHHHHh----CCcEEEeccCCccccCChhhHhhCCceeecC-CHHHHHHHHHHHhC
Q 036427 419 KMEEAMGACDCIITKAGPGTIAEAMIR----GLPIILNDFIAGQEAGNVPYVVENGCGKFSK-SPKEIANMVSQWFG 490 (536)
Q Consensus 419 ~l~~ll~~aDv~V~~sG~~tllEAma~----GlPVI~~~~~~~~e~~na~~lv~~g~g~~~~-d~~~La~~I~~ll~ 490 (536)
+..++-..+|++|+-+|-+|++.|+.. +.||+.++.+ ..|++.+ +++++.++++++++
T Consensus 101 ~~~~~~~~~DlvI~lGGDGT~L~aa~~~~~~~~PvlGiN~G--------------~LGFLt~~~~~~~~~~l~~vl~ 163 (365)
T 3pfn_A 101 DYDDISNQIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLG--------------SLGFLTPFSFENFQSQVTQVIE 163 (365)
T ss_dssp TTCCCTTTCSEEEEESSTTHHHHHHHHCSSSCCCEEEEESS--------------SCTTTCCEESTTHHHHHHHHHH
T ss_pred ChhhcccCCCEEEEEcChHHHHHHHHHhccCCCCEEEEcCC--------------CCccceeecHHHHHHHHHHHHc
Confidence 122334689999999988888888763 5899998742 1344444 55667777777764
No 293
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=23.12 E-value=73 Score=28.37 Aligned_cols=40 Identities=18% Similarity=0.199 Sum_probs=29.3
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
.+|||+|+-....|.....|..|++.|.+. |++|.+.+..
T Consensus 20 ~~~kv~IvY~S~tGnTe~~A~~ia~~l~~~---g~~v~v~~l~ 59 (191)
T 1bvy_F 20 HNTPLLVLYGSNMGTAEGTARDLADIAMSK---GFAPQVATLD 59 (191)
T ss_dssp -CCCEEEEEECSSSHHHHHHHHHHHHHHTT---TCCCEEEEGG
T ss_pred CCCeEEEEEECCChHHHHHHHHHHHHHHhC---CCceEEeeHH
Confidence 457888876554378888899999999887 6677666653
No 294
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=22.74 E-value=1e+02 Score=24.58 Aligned_cols=66 Identities=8% Similarity=0.081 Sum_probs=35.7
Q ss_pred EEEEEecCCH-------HHHHHHHcCCCCCCEEEecChhhHHHHHhhcCeEEECCC-h--HHHHHHHHhCCcEEEec
Q 036427 387 QVLVICGRNK-------KLANKLLSTDWKIPVQVKGFVSKMEEAMGACDCIITKAG-P--GTIAEAMIRGLPIILND 453 (536)
Q Consensus 387 ~~lvi~G~~~-------~l~~~l~~~~~~~~V~~~G~v~~l~~ll~~aDv~V~~sG-~--~tllEAma~GlPVI~~~ 453 (536)
+++++||.|- .+.+.+++.++.-.|.-.+. .++...+..+|++++.+- . ..-++..+-.+||-+++
T Consensus 5 kIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~~-~~~~~~~~~~Dvil~~pqv~~~~~~~~~~~~~~~v~vI~ 80 (106)
T 1e2b_A 5 HIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPE-TLAGEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVID 80 (106)
T ss_dssp EEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEECS-SSTTHHHHHCSEEEECTTSGGGHHHHHHHSSSSCCCBCC
T ss_pred EEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEecH-HHHHhhccCCCEEEEccchhhhHHHHHHHhcCCCceEEC
Confidence 4667777652 34455566565433433332 355566788999998763 2 22233333245555544
No 295
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=22.72 E-value=3.7e+02 Score=27.70 Aligned_cols=33 Identities=27% Similarity=0.278 Sum_probs=24.1
Q ss_pred HHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEE
Q 036427 237 EVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTT 278 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~ 278 (536)
.+.+++++.+||+++....- -.++++.| ||++-
T Consensus 408 el~~~i~~~~pDL~ig~~~~-----~~ia~k~g----IP~~~ 440 (492)
T 3u7q_A 408 EFEEFVKRIKPDLIGSGIKE-----KFIFQKMG----IPFRE 440 (492)
T ss_dssp HHHHHHHHHCCSEEEECHHH-----HHHHHHTT----CCEEE
T ss_pred HHHHHHHhcCCcEEEeCcch-----hHHHHHcC----CCEEe
Confidence 67788999999999986432 34566666 89763
No 296
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=22.61 E-value=2.7e+02 Score=21.61 Aligned_cols=29 Identities=10% Similarity=0.279 Sum_probs=18.0
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEE
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVF 180 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~ 180 (536)
+||||++-.+. .....+...|.+. |+++.
T Consensus 1 ~~~ilivdd~~-----~~~~~l~~~L~~~---g~~v~ 29 (134)
T 3f6c_A 1 SLNAIIIDDHP-----LAIAAIRNLLIKN---DIEIL 29 (134)
T ss_dssp CEEEEEECCCH-----HHHHHHHHHHHHT---TEEEE
T ss_pred CeEEEEEcCCH-----HHHHHHHHHHhhC---CcEEE
Confidence 36777776554 4445566777766 66664
No 297
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=22.59 E-value=93 Score=30.21 Aligned_cols=39 Identities=10% Similarity=0.122 Sum_probs=32.5
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
.++|+|+++.-|-|-...+.+||.+|.++ |..|.++|..
T Consensus 18 ~~~i~v~sgkGGvGKTTva~~LA~~lA~~---G~rVllvD~D 56 (329)
T 2woo_A 18 SLKWIFVGGKGGVGKTTTSCSLAIQMSKV---RSSVLLISTD 56 (329)
T ss_dssp TCCEEEEECSSSSSHHHHHHHHHHHHHTS---SSCEEEEECC
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHC---CCeEEEEECC
Confidence 46788877766679999999999999998 8889888753
No 298
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=22.56 E-value=3e+02 Score=22.10 Aligned_cols=65 Identities=9% Similarity=0.020 Sum_probs=37.2
Q ss_pred CeEEECC----C-hHHHHHHHH---hCCcEEEeccCCccccCChhhHhhCC-c-eeecC--CHHHHHHHHHHHhCCCHHH
Q 036427 428 DCIITKA----G-PGTIAEAMI---RGLPIILNDFIAGQEAGNVPYVVENG-C-GKFSK--SPKEIANMVSQWFGPKIDE 495 (536)
Q Consensus 428 Dv~V~~s----G-~~tllEAma---~GlPVI~~~~~~~~e~~na~~lv~~g-~-g~~~~--d~~~La~~I~~ll~~d~~~ 495 (536)
|++++-. . +..+++.+. ..+|+|+.-...+.+ ......+.| . +++.. +.++|.++|..++. ....
T Consensus 50 dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~--~~~~~~~~g~~~~~l~KP~~~~~L~~~i~~~l~-~~~~ 126 (151)
T 3kcn_A 50 SVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGNQDLT--TAMEAVNEGQVFRFLNKPCQMSDIKAAINAGIK-QYDL 126 (151)
T ss_dssp SEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGGGHH--HHHHHHHHTCCSEEEESSCCHHHHHHHHHHHHH-HHHH
T ss_pred CEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECCCCHH--HHHHHHHcCCeeEEEcCCCCHHHHHHHHHHHHH-HHHH
Confidence 7777642 2 445555443 367888765433222 122234445 4 44443 89999999999987 4433
No 299
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=22.45 E-value=3.6e+02 Score=25.91 Aligned_cols=19 Identities=21% Similarity=0.273 Sum_probs=15.3
Q ss_pred HHHHHHHhhCCCEEEEcCc
Q 036427 237 EVAKGLMKYQPDIIISVHP 255 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~~ 255 (536)
.+.+.+++++||+|++.+.
T Consensus 72 ~~~~~l~~~~~Dliv~~~y 90 (314)
T 1fmt_A 72 ENQQLVAELQADVMVVVAY 90 (314)
T ss_dssp HHHHHHHHTTCSEEEEESC
T ss_pred HHHHHHHhcCCCEEEEeec
Confidence 5567789999999998764
No 300
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=22.41 E-value=1.3e+02 Score=23.25 Aligned_cols=33 Identities=21% Similarity=0.294 Sum_probs=22.0
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCc-eEEEEeec
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNE-YQVFVTDL 184 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g-~eV~v~~~ 184 (536)
++|||+++.. | .....+++.|.+. | ++|.+++.
T Consensus 4 ~~~~v~I~G~--G----~iG~~~~~~l~~~---g~~~v~~~~r 37 (118)
T 3ic5_A 4 MRWNICVVGA--G----KIGQMIAALLKTS---SNYSVTVADH 37 (118)
T ss_dssp TCEEEEEECC--S----HHHHHHHHHHHHC---SSEEEEEEES
T ss_pred CcCeEEEECC--C----HHHHHHHHHHHhC---CCceEEEEeC
Confidence 4578887733 2 2344567888887 6 88888775
No 301
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=22.38 E-value=75 Score=31.33 Aligned_cols=41 Identities=20% Similarity=0.252 Sum_probs=29.3
Q ss_pred CCCceEEEEeCCCCchHH---HHHHHHHHHHHhccCCceEEEEeecc
Q 036427 142 DQPKKVLILMSDTGGGHR---ASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~---~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
|++|||+++++|.-.=|. ..+..++++|.+. +++|+.++..
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~---~~~v~~i~i~ 44 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKT---RFDVVLLGID 44 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTT---TEEEEEEEEC
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhc---CCeEEEEEEC
Confidence 356899999987523333 5666888888777 8999887653
No 302
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=22.26 E-value=99 Score=25.61 Aligned_cols=26 Identities=12% Similarity=0.160 Sum_probs=17.3
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHH
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFH 170 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~ 170 (536)
++||||+|.+- -.-.-.|..+.+.+.
T Consensus 3 ~~~VLFVC~gN-~cRSpmAEa~~~~~~ 28 (131)
T 1jf8_A 3 KKTIYFISTGN-SARSQMAEGWGKEIL 28 (131)
T ss_dssp CEEEEEEESSS-SSHHHHHHHHHHHHS
T ss_pred CCEEEEEcCCc-chHHHHHHHHHHHhc
Confidence 46899999764 355556666666554
No 303
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=22.21 E-value=3e+02 Score=21.97 Aligned_cols=43 Identities=9% Similarity=0.051 Sum_probs=33.8
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhcc-CCceEEEEeeccc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKF-GNEYQVFVTDLWS 186 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~-g~g~eV~v~~~~~ 186 (536)
..++-|++++.+ -...+....|-+.+.+.+ ++.+++.|+|...
T Consensus 11 ~~L~lLyvag~t-p~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~e 54 (105)
T 1t4y_A 11 QPLLLQLFVDTR-PLSQHIVQRVKNILAAVEATVPISLQVINVAD 54 (105)
T ss_dssp CCEEEEEEECSC-HHHHHHHHHHHHHHHHHCCSSCEEEEEEETTT
T ss_pred hhhheeeEeCCC-ccHHHHHHHHHHHHHHhccCCceEEEEeeccc
Confidence 337888888887 677788888888888877 6679999998754
No 304
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=22.16 E-value=1e+02 Score=28.78 Aligned_cols=39 Identities=18% Similarity=0.174 Sum_probs=27.6
Q ss_pred CceEEEEeCCCC----------chHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSDTG----------GGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~~G----------gGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
|+||||+.++.+ |=...-+..-...|++. |++|.+++..
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~a---G~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAA---GFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHT---TCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHC---CCEEEEEeCC
Confidence 579999876531 22355556667888888 8999888753
No 305
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=22.13 E-value=1.5e+02 Score=24.79 Aligned_cols=34 Identities=18% Similarity=-0.037 Sum_probs=23.6
Q ss_pred CceEEEEeCC--CCchHHHHHHHHHHHHHhccCCceEEE
Q 036427 144 PKKVLILMSD--TGGGHRASAEAIKAAFHEKFGNEYQVF 180 (536)
Q Consensus 144 ~mKIL~~~~~--~GgGh~~~~l~La~~L~~~~g~g~eV~ 180 (536)
|+|++|+..+ .|.-..+.++.++.++... +++|.
T Consensus 5 Mkk~~ivv~~~P~g~~~~~~al~~a~a~~a~---~~~v~ 40 (136)
T 2hy5_B 5 VKKFMYLNRKAPYGTIYAWEALEVVLIGAAF---DQDVC 40 (136)
T ss_dssp CCEEEEEECSCTTTSSHHHHHHHHHHHHGGG---CCEEE
T ss_pred hhEEEEEEeCCCCCcHHHHHHHHHHHHHHhC---CCCEE
Confidence 4479988744 4444777888889999887 44553
No 306
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=22.11 E-value=2.9e+02 Score=21.75 Aligned_cols=62 Identities=8% Similarity=-0.002 Sum_probs=37.9
Q ss_pred cCeEEECC----C-hHHHHHHHHh-------CCcEEEeccCCccccCChhhHhhCC-ce-eecC--CHHHHHHHHHHHhC
Q 036427 427 CDCIITKA----G-PGTIAEAMIR-------GLPIILNDFIAGQEAGNVPYVVENG-CG-KFSK--SPKEIANMVSQWFG 490 (536)
Q Consensus 427 aDv~V~~s----G-~~tllEAma~-------GlPVI~~~~~~~~e~~na~~lv~~g-~g-~~~~--d~~~La~~I~~ll~ 490 (536)
.|++|+-- . +..+++.+.. .+|+|+.-.....+ ........| .. ++.. +.++|.++|...+.
T Consensus 61 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~~~~~~--~~~~~~~~g~~~~~l~KP~~~~~L~~~i~~~~~ 138 (146)
T 3ilh_A 61 PSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLLSSSLDPR--DQAKAEASDWVDYYVSKPLTANALNNLYNKVLN 138 (146)
T ss_dssp CSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEECSSCCHH--HHHHHHHCSSCCEEECSSCCHHHHHHHHHHHHC
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEEeCCCChH--HHHHHHhcCCcceeeeCCCCHHHHHHHHHHHHH
Confidence 57777642 2 5566665544 67888776543322 222344455 43 4443 89999999999887
No 307
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=22.08 E-value=2.9e+02 Score=26.77 Aligned_cols=28 Identities=18% Similarity=0.425 Sum_probs=20.1
Q ss_pred hcCeEEECCCh---HHHHHHHHhCCcEEEec
Q 036427 426 ACDCIITKAGP---GTIAEAMIRGLPIILND 453 (536)
Q Consensus 426 ~aDv~V~~sG~---~tllEAma~GlPVI~~~ 453 (536)
.-|++|..+|. ...+-|-.+|+|+|+..
T Consensus 92 ~PDvVi~~g~~~s~p~~laA~~~~iP~vihe 122 (365)
T 3s2u_A 92 RPVCVLGLGGYVTGPGGLAARLNGVPLVIHE 122 (365)
T ss_dssp CCSEEEECSSSTHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEcCCcchHHHHHHHHHcCCCEEEEe
Confidence 45899987652 23456788999999753
No 308
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=22.07 E-value=4e+02 Score=25.46 Aligned_cols=74 Identities=12% Similarity=0.076 Sum_probs=38.3
Q ss_pred HHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEcC----HHHHHHHHHhC
Q 036427 238 VAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPT----ADVAKRAMKAG 313 (536)
Q Consensus 238 l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S----~~~~~~l~~~g 313 (536)
+.+.+...++|-||........-.+..+...+ +|+|.+-.... ....+.|.+-. ....+.+.+.|
T Consensus 120 ~~~~l~~~~vdGiIi~~~~~~~~~~~~l~~~~----iPvV~i~~~~~-------~~~~~~V~~D~~~~~~~a~~~L~~~G 188 (366)
T 3h5t_A 120 AQQLVNNAAVDGVVIYSVAKGDPHIDAIRARG----LPAVIADQPAR-------EEGMPFIAPNNRKAIAPAAQALIDAG 188 (366)
T ss_dssp HHHHHHTCCCSCEEEESCCTTCHHHHHHHHHT----CCEEEESSCCS-------CTTCCEEEECHHHHTHHHHHHHHHTT
T ss_pred HHHHHHhCCCCEEEEecCCCChHHHHHHHHCC----CCEEEECCccC-------CCCCCEEEeChHHHHHHHHHHHHHCC
Confidence 34556678899877654322211123334445 89887644321 12234554433 33444555555
Q ss_pred CCCCCEEEeCC
Q 036427 314 LQASQIKVYGL 324 (536)
Q Consensus 314 ~~~~ki~vign 324 (536)
..+|-+++.
T Consensus 189 --~r~I~~i~~ 197 (366)
T 3h5t_A 189 --HRKIGILSI 197 (366)
T ss_dssp --CCSEEEEEE
T ss_pred --CCcEEEEec
Confidence 356777763
No 309
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=22.06 E-value=1.6e+02 Score=28.28 Aligned_cols=98 Identities=16% Similarity=0.188 Sum_probs=55.4
Q ss_pred CEEEEecCCCCCCcHHHHHHHHHHHhhhcccCCCCcEEEEEe--cCCH-----HHHHHHHcCCCCCCEEEecC-----h-
Q 036427 351 PAVLLMGGGEGMGPIEATARALGNALYDENLGEPIGQVLVIC--GRNK-----KLANKLLSTDWKIPVQVKGF-----V- 417 (536)
Q Consensus 351 ~~il~~gg~~g~k~~~~~l~al~~~l~~~~~~~~~~~~lvi~--G~~~-----~l~~~l~~~~~~~~V~~~G~-----v- 417 (536)
..++.+||........++++.+.+... .++.++++|. ...+ .+.+.+++++.. .|..+.- .
T Consensus 27 g~l~iiGGgedk~~~~~i~~~~v~lag-----g~~~~I~~IptAs~~~~~~~~~~~~~f~~lG~~-~v~~L~i~~r~~a~ 100 (291)
T 3en0_A 27 PAILIIGGAEDKVHGREILQTFWSRSG-----GNDAIIGIIPSASREPLLIGERYQTIFSDMGVK-ELKVLDIRDRAQGD 100 (291)
T ss_dssp CCEEEECSSCCSSSCCHHHHHHHHHTT-----GGGCEEEEECTTCSSHHHHHHHHHHHHHHHCCS-EEEECCCCSGGGGG
T ss_pred ceEEEEECCCCccChHHHHHHHHHHcC-----CCCCeEEEEeCCCCChHHHHHHHHHHHHHcCCC-eeEEEEecCccccC
Confidence 346678887653333455666665442 2334555552 2222 234445555542 4544432 1
Q ss_pred -hhHHHHHhhcCeEEECCC-h-------------HHHHHHHHhC-CcEEEecc
Q 036427 418 -SKMEEAMGACDCIITKAG-P-------------GTIAEAMIRG-LPIILNDF 454 (536)
Q Consensus 418 -~~l~~ll~~aDv~V~~sG-~-------------~tllEAma~G-lPVI~~~~ 454 (536)
+++.+.+..||+++..+| . ..+.|+...| +|++.+-.
T Consensus 101 ~~~~~~~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSA 153 (291)
T 3en0_A 101 DSGYRLFVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSA 153 (291)
T ss_dssp CHHHHHHHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETH
T ss_pred CHHHHHHHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCH
Confidence 356789999999999875 2 2445677788 88776553
No 310
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=22.03 E-value=4.7e+02 Score=24.07 Aligned_cols=153 Identities=12% Similarity=0.064 Sum_probs=71.7
Q ss_pred HHHHHHhhCCCEEEEcCcccchH-HHHHHHHcCCCCCceEEEEecCCCCcccccccccCCEEEEcCHHHHH----HHHHh
Q 036427 238 VAKGLMKYQPDIIISVHPLMQHV-PLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAK----RAMKA 312 (536)
Q Consensus 238 l~~~l~~~kPDvVi~~~~~~~~i-~~~~~~~~g~~~~ip~v~~~~d~~~~~~~~~~~~~d~vi~~S~~~~~----~l~~~ 312 (536)
+.+.+...++|-||........- .+..+.. + +|+|.+-.+.. . ..+.|.+-...... .+.+.
T Consensus 63 ~~~~l~~~~vdgiI~~~~~~~~~~~~~~l~~-~----iPvV~i~~~~~-------~-~~~~V~~D~~~~g~~a~~~L~~~ 129 (303)
T 3kke_A 63 LSRLVSEGRVDGVLLQRREDFDDDMLAAVLE-G----VPAVTINSRVP-------G-RVGSVILDDQKGGGIATEHLITL 129 (303)
T ss_dssp HHHHHHSCSSSEEEECCCTTCCHHHHHHHHT-T----SCEEEESCCCT-------T-CCCEEEECHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCcEEEEecCCCCcHHHHHHHhC-C----CCEEEECCcCC-------C-CCCEEEECcHHHHHHHHHHHHHC
Confidence 34456678999998865433221 1222232 4 89887755442 1 34455544443333 34444
Q ss_pred CCCCCCEEEeCCCCCCCCCCCCCch-H---HHHHHcCCCCCCCEEEEecCCCCCCcHHHHHHHHHHH-----hhhcccCC
Q 036427 313 GLQASQIKVYGLPVRPSFVKPVRPK-V---ELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGNA-----LYDENLGE 383 (536)
Q Consensus 313 g~~~~ki~vignpv~~~~~~~~~~~-~---~~r~~lgi~~~~~~il~~gg~~g~k~~~~~l~al~~~-----l~~~~~~~ 383 (536)
| ..+|-++..+.... ....+ + +..++.|++.+...+ ..+. . ........+.+. +. ..
T Consensus 130 G--~~~I~~i~~~~~~~---~~~~R~~Gf~~al~~~g~~~~~~~~-~~~~-~---~~~~~~~~~~~l~~~~~l~----~~ 195 (303)
T 3kke_A 130 G--HSRIAFISGTAIHD---TAQRRKEGYLETLASAGLRSEAAWV-VDAG-W---EADAGSAALNTLYRGANLG----KP 195 (303)
T ss_dssp T--CCSEEEEESCSSCH---HHHHHHHHHHHHHHHTTCCCCGGGE-EECC-S---SHHHHHHHHHHHHHHHCTT----ST
T ss_pred C--CCeEEEEeCCCcCc---cHHHHHHHHHHHHHHcCCCCCcceE-EecC-C---ChHHHHHHHHHhcchhhhc----CC
Confidence 4 35677665432211 00011 1 223445665443323 2222 1 223333333333 32 13
Q ss_pred CCcEEEEEecCCH---HHHHHHHcCCCC--CCEEEecChh
Q 036427 384 PIGQVLVICGRNK---KLANKLLSTDWK--IPVQVKGFVS 418 (536)
Q Consensus 384 ~~~~~lvi~G~~~---~l~~~l~~~~~~--~~V~~~G~v~ 418 (536)
++...++. .... ...+.+++.++. +.|.++|+-+
T Consensus 196 ~~~~ai~~-~nd~~A~g~~~al~~~G~~vP~di~vig~D~ 234 (303)
T 3kke_A 196 DGPTAVVV-ASVNAAVGALSTALRLGLRVPEDLSIVGINT 234 (303)
T ss_dssp TSCSEEEE-SSHHHHHHHHHHHHHTTCCTTTTCEEEEESC
T ss_pred CCCcEEEE-CCHHHHHHHHHHHHHcCCCCCCceEEEEEcC
Confidence 44444443 3322 244566776654 7899999853
No 311
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=21.86 E-value=1.9e+02 Score=31.29 Aligned_cols=34 Identities=9% Similarity=0.036 Sum_probs=24.4
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
++++||||+- +|. .++.+++++++. |+++++++.
T Consensus 26 ~m~~kILI~g----~Ge--ia~~iiraar~l---Gi~~vav~s 59 (675)
T 3u9t_A 26 RSIQRLLVAN----RGE--IACRVMRSARAL---GIGSVAVHS 59 (675)
T ss_dssp CCCSEEEECC----CHH--HHHHHHHHHHHH---TCEEEEEEC
T ss_pred cCCCEEEEEC----CCH--HHHHHHHHHHHC---CCEEEEEEC
Confidence 3557888853 343 377789999999 889887754
No 312
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=21.77 E-value=2.2e+02 Score=29.03 Aligned_cols=34 Identities=15% Similarity=0.185 Sum_probs=24.3
Q ss_pred HHHHHHHhhCCCEEEEcCcccchHHHHHHHHcCCCCCceEEEE
Q 036427 237 EVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTV 279 (536)
Q Consensus 237 ~l~~~l~~~kPDvVi~~~~~~~~i~~~~~~~~g~~~~ip~v~~ 279 (536)
.+.+++++.+||+++.+..- -.++++.| +|++-+
T Consensus 366 ~le~~i~~~~pDllig~~~~-----~~~a~k~g----ip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARAGQAQLVIGNSHA-----LASARRLG----VPLLRA 399 (458)
T ss_dssp HHHHHHHHHTCSEEEECTTH-----HHHHHHTT----CCEEEC
T ss_pred HHHHHHHhcCCCEEEEChhH-----HHHHHHcC----CCEEEe
Confidence 56788999999999987542 23466666 887643
No 313
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=21.75 E-value=90 Score=26.08 Aligned_cols=26 Identities=15% Similarity=0.176 Sum_probs=17.0
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHH
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFH 170 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~ 170 (536)
++||||+|.+- -.-.-.|..+.+.+.
T Consensus 3 ~~~VLFVC~gN-~cRSpmAEai~~~~~ 28 (139)
T 1jl3_A 3 NKIIYFLCTGN-SCRSQMAEGWAKQYL 28 (139)
T ss_dssp CEEEEEEESSS-SSHHHHHHHHHHHHS
T ss_pred CCeEEEEcCCc-hHHHHHHHHHHHHhC
Confidence 46899999764 355555666666553
No 314
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=21.64 E-value=63 Score=28.72 Aligned_cols=35 Identities=11% Similarity=-0.004 Sum_probs=24.3
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
+++||++.++|- .|.. .+..+.+.|++. |++|.++
T Consensus 1 ~~k~IllgvTGs-~aa~-k~~~l~~~L~~~---g~~V~vv 35 (181)
T 1g63_A 1 MYGKLLICATAS-INVI-NINHYIVELKQH---FDEVNIL 35 (181)
T ss_dssp CCCCEEEEECSC-GGGG-GHHHHHHHHTTT---SSCEEEE
T ss_pred CCCEEEEEEECH-HHHH-HHHHHHHHHHHC---CCEEEEE
Confidence 356898887664 2444 677899999987 5666443
No 315
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=21.61 E-value=2.8e+02 Score=25.52 Aligned_cols=35 Identities=23% Similarity=0.309 Sum_probs=24.7
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
|+|.++=+|. || +++.+.+.+..|++.-+++.|..
T Consensus 1 ~~IgvfDSG~-Gg-----ltv~~~l~~~~P~~~~iy~~D~~ 35 (254)
T 1b73_A 1 MKIGIFDSGV-GG-----LTVLKAIRNRYRKVDIVYLGDTA 35 (254)
T ss_dssp CEEEEEESSS-GG-----GTHHHHHHHHSTTCEEEEEECTT
T ss_pred CcEEEEECCc-cH-----HHHHHHHHHhCCCCcEEEeecCC
Confidence 6899998888 33 44567777777766667777753
No 316
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=21.58 E-value=79 Score=31.41 Aligned_cols=36 Identities=19% Similarity=0.199 Sum_probs=25.0
Q ss_pred CCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 140 ENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 140 ~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.|++++|||++..+. . +..+++++++. |+++++++.
T Consensus 3 ~m~~~~~ilI~g~g~-~-----~~~~~~a~~~~---G~~~v~v~~ 38 (403)
T 4dim_A 3 AMYDNKRLLILGAGR-G-----QLGLYKAAKEL---GIHTIAGTM 38 (403)
T ss_dssp ---CCCEEEEECCCG-G-----GHHHHHHHHHH---TCEEEEEEC
T ss_pred cccCCCEEEEECCcH-h-----HHHHHHHHHHC---CCEEEEEcC
Confidence 356678999986653 1 35588899998 889888764
No 317
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=21.51 E-value=1.2e+02 Score=24.42 Aligned_cols=32 Identities=16% Similarity=0.268 Sum_probs=21.6
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.|||+++. . |. ....+++.|.+. |++|.+++.
T Consensus 4 ~m~i~IiG--~--G~--iG~~~a~~L~~~---g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAG--I--GR--VGYTLAKSLSEK---GHDIVLIDI 35 (140)
T ss_dssp -CEEEEEC--C--SH--HHHHHHHHHHHT---TCEEEEEES
T ss_pred CCEEEEEC--C--CH--HHHHHHHHHHhC---CCeEEEEEC
Confidence 37888873 3 32 344568888887 788888875
No 318
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=21.47 E-value=2.6e+02 Score=28.22 Aligned_cols=18 Identities=17% Similarity=0.097 Sum_probs=13.8
Q ss_pred HHHHHHHHhhCCCEEEEc
Q 036427 236 REVAKGLMKYQPDIIISV 253 (536)
Q Consensus 236 ~~l~~~l~~~kPDvVi~~ 253 (536)
..+.+++++.++|+|+..
T Consensus 73 ~~l~~~a~~~~id~vv~g 90 (442)
T 3lp8_A 73 IEVIQVCKKEKIELVVIG 90 (442)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHhCCCEEEEC
Confidence 356677888899998864
No 319
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=21.41 E-value=59 Score=28.66 Aligned_cols=41 Identities=15% Similarity=0.050 Sum_probs=23.1
Q ss_pred CCCceEEEEeCCC-CchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 142 DQPKKVLILMSDT-GGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 142 ~~~mKIL~~~~~~-GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
+.+|||+++..+. .+|.. ..+++++.+....+++|.+.+..
T Consensus 4 ~~~Mkilii~gS~r~~g~t---~~la~~i~~~l~~g~~v~~~dl~ 45 (193)
T 1rtt_A 4 SDDIKVLGISGSLRSGSYN---SAALQEAIGLVPPGMSIELADIS 45 (193)
T ss_dssp ---CEEEEEESCCSTTCHH---HHHHHHHHTTCCTTCEEEECCCT
T ss_pred CCCceEEEEECCCCCCChH---HHHHHHHHHhccCCCeEEEEeHH
Confidence 3558999987653 12433 33455555543336788887764
No 320
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=21.35 E-value=3.2e+02 Score=21.93 Aligned_cols=62 Identities=18% Similarity=0.146 Sum_probs=34.1
Q ss_pred cCeEEECC----C-hHHHHHHHH---hCCcEEEeccCCccccCChhhHhhCCceeec-C--CHHHHHHHHHHHhC
Q 036427 427 CDCIITKA----G-PGTIAEAMI---RGLPIILNDFIAGQEAGNVPYVVENGCGKFS-K--SPKEIANMVSQWFG 490 (536)
Q Consensus 427 aDv~V~~s----G-~~tllEAma---~GlPVI~~~~~~~~e~~na~~lv~~g~g~~~-~--d~~~La~~I~~ll~ 490 (536)
.|++|+-. . +..+++.+. ..+|+|+.-.....+ ......+.|+..++ . +.++|.+.|..++.
T Consensus 51 ~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~--~~~~~~~~g~~~~l~kp~~~~~L~~~l~~~~~ 123 (154)
T 2qsj_A 51 VDLILLDVNLPDAEAIDGLVRLKRFDPSNAVALISGETDHE--LIRAALEAGADGFIPKSADPQVLIHAVSLILE 123 (154)
T ss_dssp CSEEEECC------CHHHHHHHHHHCTTSEEEEC-----CH--HHHHHHHTTCCBBCCTTSCHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCCCCchHHHHHHHHHhCCCCeEEEEeCCCCHH--HHHHHHHccCCEEEeCCCCHHHHHHHHHHHHc
Confidence 46666532 1 344455443 368888865433222 23334556664444 3 88999999998887
No 321
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=21.29 E-value=1.4e+02 Score=28.33 Aligned_cols=42 Identities=12% Similarity=0.110 Sum_probs=28.4
Q ss_pred CCCceEEEEeCCC-CchHH-HHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 142 DQPKKVLILMSDT-GGGHR-ASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 142 ~~~mKIL~~~~~~-GgGh~-~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
+.+|||+++.++. .+|.. ..+..+++.+.+. |++|.++++..
T Consensus 56 ~~~mKILiI~GS~R~~S~T~~La~~~~~~l~~~---G~eveiidL~d 99 (279)
T 2fzv_A 56 APPVRILLLYGSLRARSFSRLAVEEAARLLQFF---GAETRIFDPSD 99 (279)
T ss_dssp CSCCEEEEEESCCSSSCHHHHHHHHHHHHHHHT---TCEEEEBCCTT
T ss_pred CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHhhC---CCEEEEEehhc
Confidence 4568999998653 23544 4455577777776 78998888643
No 322
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=21.23 E-value=1.4e+02 Score=27.98 Aligned_cols=38 Identities=18% Similarity=0.406 Sum_probs=30.0
Q ss_pred ceEEEEeCC-CCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 145 KKVLILMSD-TGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 145 mKIL~~~~~-~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
+|++.+++. -|-|-...+..||..|.+. |..|.++|..
T Consensus 82 ~kvI~vts~kgG~GKTt~a~nLA~~lA~~---G~rVLLID~D 120 (271)
T 3bfv_A 82 VQSIVITSEAPGAGKSTIAANLAVAYAQA---GYKTLIVDGD 120 (271)
T ss_dssp CCEEEEECSSTTSSHHHHHHHHHHHHHHT---TCCEEEEECC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhC---CCeEEEEeCC
Confidence 566666544 4459999999999999998 8889998764
No 323
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=21.17 E-value=3.8e+02 Score=25.01 Aligned_cols=35 Identities=17% Similarity=0.265 Sum_probs=24.4
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.++|.++=+|.| | +++.+++.+..|+..-+++.|.
T Consensus 7 ~~~IgvfDSGvG-G-----ltv~~~i~~~lP~~~~iy~~D~ 41 (276)
T 2dwu_A 7 HSVIGVLDSGVG-G-----LTVASEIIRQLPKESICYIGDN 41 (276)
T ss_dssp CCEEEEEESSST-T-----HHHHHHHHHHCTTSCEEEEECG
T ss_pred CCeEEEEeCCcc-h-----HHHHHHHHHhCCCCcEEEccCC
Confidence 358999988883 3 3455667777676666777765
No 324
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=21.10 E-value=4.7e+02 Score=23.79 Aligned_cols=40 Identities=10% Similarity=0.012 Sum_probs=22.1
Q ss_pred CCCceEEEEeCCCCchH-HHHHHHHHHHHHhccCCceEEEEeec
Q 036427 142 DQPKKVLILMSDTGGGH-RASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh-~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.++.+|.++..+..... ......+.+++.+. |+++.+.+.
T Consensus 6 ~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~---g~~~~~~~~ 46 (290)
T 2rgy_A 6 QQLGIIGLFVPTFFGSYYGTILKQTDLELRAV---HRHVVVATG 46 (290)
T ss_dssp --CCEEEEECSCSCSHHHHHHHHHHHHHHHHT---TCEEEEECC
T ss_pred CCCCeEEEEeCCCCCchHHHHHHHHHHHHHHC---CCEEEEEeC
Confidence 44568999887653222 22333445556665 788776543
No 325
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=20.85 E-value=90 Score=31.75 Aligned_cols=35 Identities=20% Similarity=0.104 Sum_probs=25.0
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
++++||||+ |+|. .+..+++++++. |+++++++..
T Consensus 4 ~~~k~ILI~----g~g~--~~~~i~~a~~~~---G~~vv~v~~~ 38 (461)
T 2dzd_A 4 RRIRKVLVA----NRGE--IAIRVFRACTEL---GIRTVAIYSK 38 (461)
T ss_dssp CCCSEEEEC----SCHH--HHHHHHHHHHHH---TCEEEEEECG
T ss_pred CcCcEEEEE----CCcH--HHHHHHHHHHHc---CCEEEEEECC
Confidence 445788886 2343 366788999998 8898887653
No 326
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=20.84 E-value=3.1e+02 Score=21.51 Aligned_cols=62 Identities=10% Similarity=0.140 Sum_probs=36.6
Q ss_pred cCeEEECCC-hHHHHHHHH--h-CCcEEEeccCCccccCChhhHhhCCcee-ec--C-CHHHHHHHHHHHhC
Q 036427 427 CDCIITKAG-PGTIAEAMI--R-GLPIILNDFIAGQEAGNVPYVVENGCGK-FS--K-SPKEIANMVSQWFG 490 (536)
Q Consensus 427 aDv~V~~sG-~~tllEAma--~-GlPVI~~~~~~~~e~~na~~lv~~g~g~-~~--~-d~~~La~~I~~ll~ 490 (536)
.|++|++.. +..+++.+. . .+|+|+.-.....+ ......+.|+.. +. - +.++|...|..++.
T Consensus 63 ~dlvi~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~--~~~~~~~~g~~~~l~kP~~~~~~l~~~i~~~~~ 132 (137)
T 2pln_A 63 YDLVMVSDKNALSFVSRIKEKHSSIVVLVSSDNPTSE--EEVHAFEQGADDYIAKPYRSIKALVARIEARLR 132 (137)
T ss_dssp CSEEEECSTTHHHHHHHHHHHSTTSEEEEEESSCCHH--HHHHHHHTTCSEEEESSCSCHHHHHHHHHHHTC
T ss_pred CCEEEEcCccHHHHHHHHHhcCCCccEEEEeCCCCHH--HHHHHHHcCCceeeeCCCCCHHHHHHHHHHHHh
Confidence 466664432 455555544 3 78888876443322 223345556543 33 3 78899999988876
No 327
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=20.65 E-value=1e+02 Score=28.88 Aligned_cols=38 Identities=18% Similarity=0.261 Sum_probs=29.4
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
+.|.| +..-|-|-...+..||..|.++ |..|.++|...
T Consensus 3 kvIav-s~KGGvGKTT~a~nLA~~La~~---G~rVlliD~D~ 40 (289)
T 2afh_E 3 RQCAI-YGKGGIGKSTTTQNLVAALAEM---GKKVMIVGCDP 40 (289)
T ss_dssp EEEEE-EECTTSSHHHHHHHHHHHHHHT---TCCEEEEEECS
T ss_pred eEEEE-eCCCcCcHHHHHHHHHHHHHHC---CCeEEEEecCC
Confidence 34555 5444459999999999999998 88999998653
No 328
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=20.65 E-value=1.2e+02 Score=26.08 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=22.5
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEE
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVF 180 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~ 180 (536)
+|.+|||.|-+... |... -..|.+.|.++ |++|.
T Consensus 4 ~m~~mkI~igsDha--G~~l-K~~i~~~L~~~---G~eV~ 37 (148)
T 4em8_A 4 SMVVKRVFLSSDHA--GVEL-RLFLSAYLRDL---GCEVF 37 (148)
T ss_dssp CCSCSEEEEEECGG--GHHH-HHHHHHHHHHT---TCEEE
T ss_pred cceeeEEEEEECch--hHHH-HHHHHHHHHHC---CCEEE
Confidence 44568988877654 4332 34578889888 77775
No 329
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=20.59 E-value=87 Score=30.75 Aligned_cols=41 Identities=15% Similarity=0.246 Sum_probs=28.7
Q ss_pred CCCceEEEEeCCCCchHH---HHHHHHHHHHHhccCCceEEEEeecc
Q 036427 142 DQPKKVLILMSDTGGGHR---ASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~---~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
|+.+||+++.+|.-.=|. ..+..++++|.+. +++|+.++..
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~---gy~v~~i~i~ 44 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTN---KFDIIPIGIT 44 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTT---TEEEEEEEEC
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHh---CCEEEEEEEe
Confidence 456799999887622333 4566788899888 8999877543
No 330
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=20.53 E-value=1.4e+02 Score=25.82 Aligned_cols=33 Identities=27% Similarity=0.217 Sum_probs=22.0
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
|||+++ +++| .....+++.|.++ |++|++++..
T Consensus 4 ~~ilVt-GatG----~iG~~l~~~l~~~---g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIF-GATG----QTGLTTLAQAVQA---GYEVTVLVRD 36 (206)
T ss_dssp CEEEEE-STTS----HHHHHHHHHHHHT---TCEEEEEESC
T ss_pred CEEEEE-cCCc----HHHHHHHHHHHHC---CCeEEEEEeC
Confidence 677655 4442 3445678888888 7889887653
No 331
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=20.49 E-value=1.6e+02 Score=34.15 Aligned_cols=36 Identities=25% Similarity=0.121 Sum_probs=24.5
Q ss_pred CCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 142 DQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
++++||||+ |+|. .+..+++++++. |+++++++...
T Consensus 2 ~~~kkVLIa----grGe--ia~riiraa~el---Gi~vVav~s~~ 37 (1150)
T 3hbl_A 2 KQIKKLLVA----NRGE--IAIRIFRAAAEL---DISTVAIYSNE 37 (1150)
T ss_dssp -CCCEEEEC----CCHH--HHHHHHHHHHHT---TCEEEEEECGG
T ss_pred CCCCEEEEE----CCCH--HHHHHHHHHHHC---CCEEEEEEcCC
Confidence 445688883 2344 456788999998 88988876433
No 332
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=20.40 E-value=1.2e+02 Score=26.95 Aligned_cols=38 Identities=18% Similarity=0.260 Sum_probs=23.9
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEee
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTD 183 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~ 183 (536)
++|||||+|.+- -.-.-.|..|.+.+....| ..+.+.+
T Consensus 33 ~~~~VLFVC~gN-iCRSpmAEai~r~~~~~~g--~~~~v~S 70 (184)
T 4etn_A 33 GSMDIIFVCTGN-TSRSPMAEALFKSIAEREG--LNVNVRS 70 (184)
T ss_dssp -CEEEEEEESSS-SSHHHHHHHHHHHHHHHHT--CCEEEEE
T ss_pred CCCEEEEECCCc-hhHHHHHHHHHHHHHHhcC--CcEEEEe
Confidence 358999999764 3666677777777765433 2344444
No 333
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=20.33 E-value=1.1e+02 Score=29.25 Aligned_cols=39 Identities=8% Similarity=-0.039 Sum_probs=26.2
Q ss_pred CCCCCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 138 GIENDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 138 ~~~~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
|..+.++|||.|+..| .....++..|.+. |++|.+++..
T Consensus 3 m~~~~~~~~IgiIG~G------~mG~~~A~~l~~~---G~~V~~~dr~ 41 (306)
T 3l6d_A 3 LSDESFEFDVSVIGLG------AMGTIMAQVLLKQ---GKRVAIWNRS 41 (306)
T ss_dssp CCCCCCSCSEEEECCS------HHHHHHHHHHHHT---TCCEEEECSS
T ss_pred CCcccCCCeEEEECCC------HHHHHHHHHHHHC---CCEEEEEeCC
Confidence 3445567899998544 2334567888887 7888888653
No 334
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=20.28 E-value=1.3e+02 Score=28.78 Aligned_cols=35 Identities=14% Similarity=0.251 Sum_probs=22.2
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
++|+|| +++++| .....+++.|.++ |++|++++..
T Consensus 4 ~~~~vl-VTGatG----~iG~~l~~~L~~~---G~~V~~~~r~ 38 (341)
T 3enk_A 4 TKGTIL-VTGGAG----YIGSHTAVELLAH---GYDVVIADNL 38 (341)
T ss_dssp SSCEEE-EETTTS----HHHHHHHHHHHHT---TCEEEEECCC
T ss_pred CCcEEE-EecCCc----HHHHHHHHHHHHC---CCcEEEEecC
Confidence 345665 455542 2334578889888 8899887653
No 335
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=20.28 E-value=1.2e+02 Score=28.06 Aligned_cols=37 Identities=11% Similarity=0.187 Sum_probs=28.8
Q ss_pred CCceEEEE-eCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 143 QPKKVLIL-MSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 143 ~~mKIL~~-~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
+|+|.+|+ ..++|-|-...++.|+++|+++ |..|...
T Consensus 19 ~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~---G~~V~~f 56 (242)
T 3qxc_A 19 FQGHMLFISATNTNAGKTTCARLLAQYCNAC---GVKTILL 56 (242)
T ss_dssp CCCEEEEEEESSTTSSHHHHHHHHHHHHHHT---TCCEEEE
T ss_pred hcCcEEEEEeCCCCCcHHHHHHHHHHHHHhC---CCceEEE
Confidence 34465555 4678889999999999999999 7777654
No 336
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=20.21 E-value=84 Score=25.48 Aligned_cols=38 Identities=16% Similarity=0.179 Sum_probs=24.2
Q ss_pred CceEEEEeCC--CCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 144 PKKVLILMSD--TGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 144 ~mKIL~~~~~--~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
|+|++|+..+ .|.-..+.++.++.++... +|.+.|+..
T Consensus 1 Mkk~~~vv~~~P~g~~~~~~al~~a~a~~a~-~~~v~vff~ 40 (119)
T 2d1p_B 1 MKRIAFVFSTAPHGTAAGREGLDALLATSAL-TDDLAVFFI 40 (119)
T ss_dssp CCCEEEEECSCTTTSTHHHHHHHHHHHHHTT-CSCEEEEEC
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhC-CCCEEEEEe
Confidence 4578888644 4344558888888888876 334444443
No 337
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=20.20 E-value=5e+02 Score=23.73 Aligned_cols=35 Identities=17% Similarity=0.115 Sum_probs=24.1
Q ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeeccc
Q 036427 145 KKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLWS 186 (536)
Q Consensus 145 mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~~ 186 (536)
.|+.+++++. +|. ..++++.|.++ |+.|++++...
T Consensus 6 ~k~~lVTGas-~GI---G~aia~~la~~---G~~V~~~~r~~ 40 (274)
T 3e03_A 6 GKTLFITGAS-RGI---GLAIALRAARD---GANVAIAAKSA 40 (274)
T ss_dssp TCEEEEETTT-SHH---HHHHHHHHHHT---TCEEEEEESCC
T ss_pred CcEEEEECCC-ChH---HHHHHHHHHHC---CCEEEEEeccc
Confidence 4677777666 333 34578889888 88898887543
No 338
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=20.16 E-value=75 Score=31.17 Aligned_cols=33 Identities=12% Similarity=0.162 Sum_probs=25.0
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeecc
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDLW 185 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~~ 185 (536)
.|||+|+..|. . .+.+|..|.++ |++|.|++..
T Consensus 1 sm~V~IVGaGp-a-----Gl~~A~~L~~~---G~~v~v~Er~ 33 (412)
T 4hb9_A 1 SMHVGIIGAGI-G-----GTCLAHGLRKH---GIKVTIYERN 33 (412)
T ss_dssp CCEEEEECCSH-H-----HHHHHHHHHHT---TCEEEEECSS
T ss_pred CCEEEEECcCH-H-----HHHHHHHHHhC---CCCEEEEecC
Confidence 48999997776 2 35667788888 8999998753
No 339
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=20.13 E-value=1.6e+02 Score=29.73 Aligned_cols=33 Identities=15% Similarity=0.062 Sum_probs=21.1
Q ss_pred CCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEee
Q 036427 143 QPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTD 183 (536)
Q Consensus 143 ~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~ 183 (536)
++||||++.++ | +..+++..+.+.. |+++++++
T Consensus 20 ~~~~iliiG~g---~---r~~a~a~~~~~~~--g~~~v~~~ 52 (451)
T 2yrx_A 20 SHMNVLVIGRG---G---REHAIAWKAAQSP--LVGKLYVA 52 (451)
T ss_dssp SSEEEEEEECS---H---HHHHHHHHHHTCT--TEEEEEEE
T ss_pred CCCEEEEECCC---H---HHHHHHHHHHhcC--CCCEEEEE
Confidence 45799998765 2 3456677776652 67765554
No 340
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=20.09 E-value=4.9e+02 Score=23.56 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=22.8
Q ss_pred CCCceEEEEeCCCCchHH-HHHHHHHHHHHhccCCceEEEEeec
Q 036427 142 DQPKKVLILMSDTGGGHR-ASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 142 ~~~mKIL~~~~~~GgGh~-~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
.++.+|.++..+....-. .....+.+++.+. |+++.+.+.
T Consensus 6 ~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~---g~~~~~~~~ 46 (293)
T 3l6u_A 6 PKRNIVGFTIVNDKHEFAQRLINAFKAEAKAN---KYEALVATS 46 (293)
T ss_dssp ---CEEEEEESCSCSHHHHHHHHHHHHHHHHT---TCEEEEEEC
T ss_pred CCCcEEEEEEecCCcHHHHHHHHHHHHHHHHc---CCEEEEECC
Confidence 455789999877533222 2334455556665 788877654
No 341
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=20.05 E-value=64 Score=32.77 Aligned_cols=32 Identities=25% Similarity=0.107 Sum_probs=22.9
Q ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEeec
Q 036427 144 PKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTDL 184 (536)
Q Consensus 144 ~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~~ 184 (536)
++||||+. +| ..+..+++++++. |+++++++.
T Consensus 2 ~k~ilI~g----~g--~~~~~~~~a~~~~---G~~vv~v~~ 33 (451)
T 1ulz_A 2 VNKVLVAN----RG--EIAVRIIRACKEL---GIPTVAIYN 33 (451)
T ss_dssp CSSEEECC----CH--HHHHHHHHHHHHH---TCCEEEEEC
T ss_pred CceEEEEC----Cc--HHHHHHHHHHHHc---CCeEEEEec
Confidence 56888763 23 2466789999998 888887754
No 342
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=20.02 E-value=1.3e+02 Score=30.07 Aligned_cols=34 Identities=21% Similarity=0.100 Sum_probs=26.0
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHHHHHHHhccCCceEEEEee
Q 036427 141 NDQPKKVLILMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVTD 183 (536)
Q Consensus 141 ~~~~mKIL~~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~~ 183 (536)
||+++||+++.+| ..+..+++++++. |++|++++
T Consensus 21 mm~~~~I~ilGgG------~lg~~l~~aa~~l---G~~v~~~d 54 (403)
T 3k5i_A 21 MWNSRKVGVLGGG------QLGRMLVESANRL---NIQVNVLD 54 (403)
T ss_dssp CCSCCEEEEECCS------HHHHHHHHHHHHH---TCEEEEEE
T ss_pred CCCCCEEEEECCC------HHHHHHHHHHHHC---CCEEEEEE
Confidence 3456789988654 3566788999998 89999888
No 343
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=20.00 E-value=3.5e+02 Score=26.23 Aligned_cols=65 Identities=14% Similarity=0.138 Sum_probs=41.1
Q ss_pred CCcEEEEEecCCHHHHHHH-HcCCCCCCEEEecChhhHHHHHhh--cCeEEECCC----hHHHHHHHHhCCcEEEecc
Q 036427 384 PIGQVLVICGRNKKLANKL-LSTDWKIPVQVKGFVSKMEEAMGA--CDCIITKAG----PGTIAEAMIRGLPIILNDF 454 (536)
Q Consensus 384 ~~~~~lvi~G~~~~l~~~l-~~~~~~~~V~~~G~v~~l~~ll~~--aDv~V~~sG----~~tllEAma~GlPVI~~~~ 454 (536)
++..++-++...++-.+.+ ++.+. +. ..+++.+++.. .|+++..+- .-.+.+|+.+|++|++=..
T Consensus 49 ~~~~lvav~d~~~~~a~~~a~~~~~---~~---~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKP 120 (361)
T 3u3x_A 49 AGARLAGFHEKDDALAAEFSAVYAD---AR---RIATAEEILEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKP 120 (361)
T ss_dssp TTCEEEEEECSCHHHHHHHHHHSSS---CC---EESCHHHHHTCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEESC
T ss_pred CCcEEEEEEcCCHHHHHHHHHHcCC---Cc---ccCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeCC
Confidence 4577777777776443333 33321 11 13577888875 788776652 3456789999999998543
No 344
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=20.00 E-value=1.3e+02 Score=28.03 Aligned_cols=35 Identities=23% Similarity=0.282 Sum_probs=27.5
Q ss_pred ceEEE-EeCCCCchHHHHHHHHHHHHHhccCCceEEEEe
Q 036427 145 KKVLI-LMSDTGGGHRASAEAIKAAFHEKFGNEYQVFVT 182 (536)
Q Consensus 145 mKIL~-~~~~~GgGh~~~~l~La~~L~~~~g~g~eV~v~ 182 (536)
||.+| ...++|-|-...++.|+++|+++ |..|...
T Consensus 26 m~~i~Itgt~t~vGKT~vt~gL~~~l~~~---G~~V~~f 61 (251)
T 3fgn_A 26 MTILVVTGTGTGVGKTVVCAALASAARQA---GIDVAVC 61 (251)
T ss_dssp CEEEEEEESSTTSCHHHHHHHHHHHHHHT---TCCEEEE
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHC---CCeEEEE
Confidence 45554 55678889999999999999999 7777554
Done!