BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>036428
MVIIKIPICAVGTCLAQHSTDSDLFSTSVLESQLTTSTTFIHFINNNNNMEEANVVETKD
GTISVASAFAAHQEAVQDRDHEFLSKAVEEAYKGVECGDGGPFGAVVVRSDEVVVSCHNM
VLKHTDPTAHAEVTAVRE

High Scoring Gene Products

Symbol, full name Information P value
AT5G28050 protein from Arabidopsis thaliana 3.4e-29
R13A5.10 gene from Caenorhabditis elegans 3.1e-12
Y48A6B.7 gene from Caenorhabditis elegans 2.5e-10
MCA1498
Zinc-binding domain protein
protein from Methylococcus capsulatus str. Bath 1.1e-05
CBU_1374
Cytidine/deoxycytidylate deaminase family protein
protein from Coxiella burnetii RSA 493 6.3e-05
CBU_1374
cytidine/deoxycytidylate deaminase family protein
protein from Coxiella burnetii RSA 493 6.3e-05
CHY_2682
cytidine/deoxycytidylate deaminase family protein
protein from Carboxydothermus hydrogenoformans Z-2901 0.00010
APH_0321
Cytidine and deoxycytidylate deaminase family protein
protein from Anaplasma phagocytophilum HZ 0.00043
APH_0321
cytidine and deoxycytidylate deaminase family protein
protein from Anaplasma phagocytophilum HZ 0.00043

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036428
        (138 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2143774 - symbol:AT5G28050 species:3702 "Arabi...   324  3.4e-29   1
WB|WBGene00020052 - symbol:R13A5.10 species:6239 "Caenorh...   164  3.1e-12   1
WB|WBGene00012968 - symbol:Y48A6B.7 species:6239 "Caenorh...   146  2.5e-10   1
UNIPROTKB|Q608J2 - symbol:MCA1498 "Zinc-binding domain pr...   102  1.1e-05   1
UNIPROTKB|Q83BW3 - symbol:CBU_1374 "Cytidine/deoxycytidyl...    95  6.3e-05   1
TIGR_CMR|CBU_1374 - symbol:CBU_1374 "cytidine/deoxycytidy...    95  6.3e-05   1
TIGR_CMR|CHY_2682 - symbol:CHY_2682 "cytidine/deoxycytidy...    93  0.00010   1
UNIPROTKB|Q2GL20 - symbol:APH_0321 "Cytidine and deoxycyt...    89  0.00043   1
TIGR_CMR|APH_0321 - symbol:APH_0321 "cytidine and deoxycy...    89  0.00043   1


>TAIR|locus:2143774 [details] [associations]
            symbol:AT5G28050 species:3702 "Arabidopsis thaliana"
            [GO:0003824 "catalytic activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA;ISS] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0016787 "hydrolase activity" evidence=IEA;ISS]
            [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR002125
            InterPro:IPR016192 InterPro:IPR016193 Pfam:PF00383 PROSITE:PS00903
            GO:GO:0005829 EMBL:CP002688 GO:GO:0008270 SUPFAM:SSF53927
            GO:GO:0008152 GO:GO:0016787 UniGene:At.25349 IPI:IPI00657077
            RefSeq:NP_001031959.1 ProteinModelPortal:F4K5T6 PRIDE:F4K5T6
            EnsemblPlants:AT5G28050.2 GeneID:832875 KEGG:ath:AT5G28050
            OMA:RDHKFLS PhylomeDB:F4K5T6 Uniprot:F4K5T6
        Length = 204

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 60/83 (72%), Positives = 69/83 (83%)

Query:    56 VETKDGTISVASAFAAHQEAVQDRDHEFLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXX 115
             +E KDGTISVASAF+ HQ+AV D DH+FL++AVEEAYKGV+CGDGGPFGA          
Sbjct:    25 LEAKDGTISVASAFSGHQQAVHDSDHKFLTQAVEEAYKGVDCGDGGPFGAVIVHNNEVVA 84

Query:   116 SCHNMVLKHTDPTAHAEVTAVRE 138
             SCHNMVLK+TDPTAHAEVTA+RE
Sbjct:    85 SCHNMVLKYTDPTAHAEVTAIRE 107


>WB|WBGene00020052 [details] [associations]
            symbol:R13A5.10 species:6239 "Caenorhabditis elegans"
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] InterPro:IPR002125 InterPro:IPR016193
            Pfam:PF00383 GO:GO:0008270 SUPFAM:SSF53927 GO:GO:0008152
            GO:GO:0016787 eggNOG:COG0590 GeneTree:ENSGT00390000014126
            EMBL:FO080424 RefSeq:NP_498663.1 UniGene:Cel.10179
            ProteinModelPortal:Q95Y87 STRING:Q95Y87 PaxDb:Q95Y87
            EnsemblMetazoa:R13A5.10 GeneID:260136 KEGG:cel:CELE_R13A5.10
            UCSC:R13A5.10 CTD:260136 WormBase:R13A5.10 HOGENOM:HOG000085049
            InParanoid:Q95Y87 OMA:HNTVVGD NextBio:952894 Uniprot:Q95Y87
        Length = 153

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 34/56 (60%), Positives = 38/56 (67%)

Query:    82 EFLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAVR 137
             EF+  A+EEA KG+E GDGGPFGA          S HNMVL   DPTAHAEVTA+R
Sbjct:     2 EFMKLAIEEAKKGMEKGDGGPFGAVIVKDGKVIGSGHNMVLVTKDPTAHAEVTAIR 57


>WB|WBGene00012968 [details] [associations]
            symbol:Y48A6B.7 species:6239 "Caenorhabditis elegans"
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] InterPro:IPR002125 InterPro:IPR016193
            Pfam:PF00383 GO:GO:0008270 SUPFAM:SSF53927 GO:GO:0008152
            GO:GO:0016787 eggNOG:COG0590 GeneTree:ENSGT00390000014126
            EMBL:AL023844 HOGENOM:HOG000085049 PIR:T26984 RefSeq:NP_499418.1
            ProteinModelPortal:Q9XXD0 SMR:Q9XXD0 PaxDb:Q9XXD0
            EnsemblMetazoa:Y48A6B.7 GeneID:176533 KEGG:cel:CELE_Y48A6B.7
            UCSC:Y48A6B.7 CTD:176533 WormBase:Y48A6B.7 InParanoid:Q9XXD0
            OMA:ARIDRVY NextBio:892976 Uniprot:Q9XXD0
        Length = 168

 Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 30/57 (52%), Positives = 38/57 (66%)

Query:    82 EFLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSC-HNMVLKHTDPTAHAEVTAVR 137
             E +++AV EA +GVECGDGGPFGA          +  HNMVL   DPT HAE+TA++
Sbjct:    16 EHMAEAVAEACRGVECGDGGPFGAVVVDSNGKVVAKGHNMVLVTKDPTMHAEMTAIK 72


>UNIPROTKB|Q608J2 [details] [associations]
            symbol:MCA1498 "Zinc-binding domain protein" species:243233
            "Methylococcus capsulatus str. Bath" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR002125
            InterPro:IPR016193 Pfam:PF00383 GO:GO:0008270 SUPFAM:SSF53927
            GO:GO:0008152 GO:GO:0016787 EMBL:AE017282 GenomeReviews:AE017282_GR
            HOGENOM:HOG000085049 RefSeq:YP_113955.1 ProteinModelPortal:Q608J2
            GeneID:3104820 KEGG:mca:MCA1498 PATRIC:22606836 OMA:IYWARID
            ProtClustDB:CLSK448195 Uniprot:Q608J2
        Length = 164

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 21/62 (33%), Positives = 33/62 (53%)

Query:    78 DRDHEFLSKAVEEAYK-GVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAV 136
             ++D  ++  A++   + G+    GGPFGA             N V++  DPTAHAE+ A+
Sbjct:     9 EQDRAYMRLAIQTMRRAGIVDRTGGPFGAVIVRGGQVLAVAGNSVIRDNDPTAHAEINAI 68

Query:   137 RE 138
             RE
Sbjct:    69 RE 70


>UNIPROTKB|Q83BW3 [details] [associations]
            symbol:CBU_1374 "Cytidine/deoxycytidylate deaminase family
            protein" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR002125
            InterPro:IPR016193 Pfam:PF00383 GO:GO:0008270 SUPFAM:SSF53927
            GO:GO:0008152 GO:GO:0016787 EMBL:AE016828 GenomeReviews:AE016828_GR
            KO:K01493 HOGENOM:HOG000085049 OMA:IYWARID RefSeq:NP_820363.1
            ProteinModelPortal:Q83BW3 GeneID:1209280 KEGG:cbu:CBU_1374
            PATRIC:17931491 ProtClustDB:CLSK914738
            BioCyc:CBUR227377:GJ7S-1362-MONOMER Uniprot:Q83BW3
        Length = 159

 Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 20/62 (32%), Positives = 29/62 (46%)

Query:    77 QDRDHEFLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAV 136
             ++ D +FL +  +     +    GGPFGA             N V    DPTAH+E+ A+
Sbjct:     3 ENNDKQFLHEVFDLVKNSISHNLGGPFGALIVRDSKIIAKGVNRVTTSNDPTAHSEIVAI 62

Query:   137 RE 138
             RE
Sbjct:    63 RE 64


>TIGR_CMR|CBU_1374 [details] [associations]
            symbol:CBU_1374 "cytidine/deoxycytidylate deaminase family
            protein" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=ISS] InterPro:IPR002125 InterPro:IPR016193 Pfam:PF00383
            GO:GO:0008270 SUPFAM:SSF53927 GO:GO:0008152 GO:GO:0016787
            EMBL:AE016828 GenomeReviews:AE016828_GR KO:K01493
            HOGENOM:HOG000085049 OMA:IYWARID RefSeq:NP_820363.1
            ProteinModelPortal:Q83BW3 GeneID:1209280 KEGG:cbu:CBU_1374
            PATRIC:17931491 ProtClustDB:CLSK914738
            BioCyc:CBUR227377:GJ7S-1362-MONOMER Uniprot:Q83BW3
        Length = 159

 Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 20/62 (32%), Positives = 29/62 (46%)

Query:    77 QDRDHEFLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAV 136
             ++ D +FL +  +     +    GGPFGA             N V    DPTAH+E+ A+
Sbjct:     3 ENNDKQFLHEVFDLVKNSISHNLGGPFGALIVRDSKIIAKGVNRVTTSNDPTAHSEIVAI 62

Query:   137 RE 138
             RE
Sbjct:    63 RE 64


>TIGR_CMR|CHY_2682 [details] [associations]
            symbol:CHY_2682 "cytidine/deoxycytidylate deaminase family
            protein" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR002125
            InterPro:IPR016192 InterPro:IPR016193 Pfam:PF00383 PROSITE:PS00903
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0008270
            SUPFAM:SSF53927 GO:GO:0008152 GO:GO:0016787 eggNOG:COG0590
            HOGENOM:HOG000085050 OMA:NDEYYMR RefSeq:YP_361468.1
            ProteinModelPortal:Q3A8R6 SMR:Q3A8R6 STRING:Q3A8R6 GeneID:3726637
            KEGG:chy:CHY_2682 PATRIC:21278385
            BioCyc:CHYD246194:GJCN-2680-MONOMER Uniprot:Q3A8R6
        Length = 153

 Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
 Identities = 23/60 (38%), Positives = 34/60 (56%)

Query:    80 DHE-FLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAVRE 138
             DHE F+++A++EA K    G+  P GA            HN+    +DPTAHAE+ A++E
Sbjct:     2 DHEKFMAEALKEAEKAALQGEV-PVGAVVVYNGEIIGRGHNLRETFSDPTAHAEIVALKE 60


>UNIPROTKB|Q2GL20 [details] [associations]
            symbol:APH_0321 "Cytidine and deoxycytidylate deaminase
            family protein" species:212042 "Anaplasma phagocytophilum HZ"
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR002125
            InterPro:IPR016192 InterPro:IPR016193 Pfam:PF00383 PROSITE:PS00903
            GO:GO:0008270 SUPFAM:SSF53927 GO:GO:0008152 GO:GO:0016787
            EMBL:CP000235 GenomeReviews:CP000235_GR eggNOG:COG0590 KO:K01485
            HOGENOM:HOG000085050 OMA:CAMCAQA ProtClustDB:CLSK749379
            RefSeq:YP_504931.1 ProteinModelPortal:Q2GL20 STRING:Q2GL20
            GeneID:3930820 KEGG:aph:APH_0321 PATRIC:20949224
            BioCyc:APHA212042:GHPM-351-MONOMER Uniprot:Q2GL20
        Length = 147

 Score = 89 (36.4 bits), Expect = 0.00043, P = 0.00043
 Identities = 21/59 (35%), Positives = 31/59 (52%)

Query:    79 RDHEFLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAVR 137
             R   ++  A+EEA      G+  P GA            HN+ +++TDPTAHAE+ A+R
Sbjct:     2 RASAYMKIAMEEANSS--SGEI-PVGALVVRNGVIIAKAHNLTIQNTDPTAHAEIVAIR 57


>TIGR_CMR|APH_0321 [details] [associations]
            symbol:APH_0321 "cytidine and deoxycytidylate deaminase
            family protein" species:212042 "Anaplasma phagocytophilum HZ"
            [GO:0003824 "catalytic activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=ISS] InterPro:IPR002125 InterPro:IPR016192
            InterPro:IPR016193 Pfam:PF00383 PROSITE:PS00903 GO:GO:0008270
            SUPFAM:SSF53927 GO:GO:0008152 GO:GO:0016787 EMBL:CP000235
            GenomeReviews:CP000235_GR eggNOG:COG0590 KO:K01485
            HOGENOM:HOG000085050 OMA:CAMCAQA ProtClustDB:CLSK749379
            RefSeq:YP_504931.1 ProteinModelPortal:Q2GL20 STRING:Q2GL20
            GeneID:3930820 KEGG:aph:APH_0321 PATRIC:20949224
            BioCyc:APHA212042:GHPM-351-MONOMER Uniprot:Q2GL20
        Length = 147

 Score = 89 (36.4 bits), Expect = 0.00043, P = 0.00043
 Identities = 21/59 (35%), Positives = 31/59 (52%)

Query:    79 RDHEFLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAVR 137
             R   ++  A+EEA      G+  P GA            HN+ +++TDPTAHAE+ A+R
Sbjct:     2 RASAYMKIAMEEANSS--SGEI-PVGALVVRNGVIIAKAHNLTIQNTDPTAHAEIVAIR 57


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.128   0.368    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      138       123   0.00091  102 3  11 22  0.37    31
                                                     29  0.50    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  541 (58 KB)
  Total size of DFA:  119 KB (2079 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.54u 0.10s 10.64t   Elapsed:  00:00:00
  Total cpu time:  10.54u 0.10s 10.64t   Elapsed:  00:00:00
  Start:  Sat May 11 15:56:37 2013   End:  Sat May 11 15:56:37 2013

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