BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036428
(138 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O34598|GUAD_BACSU Guanine deaminase OS=Bacillus subtilis (strain 168) GN=guaD PE=1
SV=1
Length = 156
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 80 DHE-FLSKAVEEAYKGVECGDGGPFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTAVRE 138
+HE FL +AV A +GV G GGPFGAV+V+ ++ N V DPTAHAEVTA+R+
Sbjct: 2 NHETFLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRK 61
>sp|O67050|TADA_AQUAE tRNA-specific adenosine deaminase OS=Aquifex aeolicus (strain VF5)
GN=tadA PE=1 SV=1
Length = 151
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 83 FLSKAVEEAYKGVECGDGGPFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTAVRE 138
FL A+ EA + E G+ P GA++V+ E++ HN V + DPTAHAE+ A++E
Sbjct: 6 FLKVALREAKRAFEKGEV-PVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKE 60
>sp|Q8K9R4|Y246_BUCAP Uncharacterized protein BUsg_246 OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=BUsg_246 PE=3 SV=1
Length = 151
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 78 DRDHEFLSKAVEEAYKGVECGDGGPFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTAVR 137
+RD ++ A++ AY E G+ P GA++V ++++ + N V+ D TAHAE+ A+R
Sbjct: 4 NRDSYWMKIALKYAYYAEENGEV-PIGAILVFQEKIIGTGWNSVISQNDSTAHAEIIALR 62
Query: 138 E 138
E
Sbjct: 63 E 63
>sp|P57343|Y255_BUCAI Uncharacterized protein BU255 OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=BU255 PE=3 SV=1
Length = 161
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 78 DRDHEFLSKAVEEAYKGVECGDGGPFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTAVR 137
++D ++ A++ AY E G+ P GA++V + ++ N + DPTAHAE+ A+R
Sbjct: 4 EKDKNWMKIALKYAYYAKEKGEI-PIGAILVFKERIIGIGWNSSISKNDPTAHAEIIALR 62
>sp|Q9S7I0|TADA_ARATH tRNA-specific adenosine deaminase, chloroplastic OS=Arabidopsis
thaliana GN=TADA PE=1 SV=1
Length = 1307
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 80 DHEFLSKAVEEAYKGVECGDGGPFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTAVRE 138
D F+ +A+ EA K + + P GAV+V +++ +N+V + D TAHAE+ +RE
Sbjct: 1110 DEIFMREALVEAKKAADTWEV-PVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIRE 1167
>sp|P68397|TADA_SHIFL tRNA-specific adenosine deaminase OS=Shigella flexneri GN=tadA PE=3
SV=2
Length = 167
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 102 PFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTAVRE 138
P GAV+V ++ V+ N + DPTAHAE+ A+R+
Sbjct: 29 PVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQ 65
>sp|P68398|TADA_ECOLI tRNA-specific adenosine deaminase OS=Escherichia coli (strain K12)
GN=tadA PE=1 SV=2
Length = 167
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 102 PFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTAVRE 138
P GAV+V ++ V+ N + DPTAHAE+ A+R+
Sbjct: 29 PVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQ 65
>sp|Q8FF24|TADA_ECOL6 tRNA-specific adenosine deaminase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=tadA PE=3 SV=2
Length = 167
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 102 PFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTAVRE 138
P GAV+V ++ V+ N + DPTAHAE+ A+R+
Sbjct: 29 PVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQ 65
>sp|Q8XA44|TADA_ECO57 tRNA-specific adenosine deaminase OS=Escherichia coli O157:H7
GN=tadA PE=3 SV=2
Length = 167
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 102 PFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTAVRE 138
P GAV+V ++ V+ N + DPTAHAE+ A+R+
Sbjct: 29 PVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQ 65
>sp|P21335|TADA_BACSU tRNA-specific adenosine deaminase OS=Bacillus subtilis (strain 168)
GN=tadA PE=1 SV=1
Length = 161
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 79 RDHEFLSKAVEEAYKGVECGDGGPFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTAVRE 138
+D ++ +A++EA K E G+ P GAV+V + E++ HN+ AHAE+ + E
Sbjct: 3 QDELYMKEAIKEAKKAEEKGEV-PIGAVLVINGEIIARAHNLRETEQRSIAHAEMLVIDE 61
>sp|Q7CQ08|TADA_SALTY tRNA-specific adenosine deaminase OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=tadA PE=3 SV=2
Length = 172
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 80 DHEFLSK----AVEEAYKGVECGDGGPFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTA 135
DHE+ + + A+ E P GAV+V + V+ N + DPTAHAE+ A
Sbjct: 7 DHEYWMRHALTLAKRAWDEREV----PVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMA 62
Query: 136 VRE 138
+R+
Sbjct: 63 LRQ 65
>sp|Q8XGY4|TADA_SALTI tRNA-specific adenosine deaminase OS=Salmonella typhi GN=tadA PE=3
SV=2
Length = 172
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 80 DHEFLSK----AVEEAYKGVECGDGGPFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTA 135
DHE+ + + A+ E P GAV+V + V+ N + DPTAHAE+ A
Sbjct: 7 DHEYWMRHALTLAKRAWDEREV----PVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMA 62
Query: 136 VRE 138
+R+
Sbjct: 63 LRQ 65
>sp|P44931|TADA_HAEIN tRNA-specific adenosine deaminase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=tadA PE=3 SV=1
Length = 173
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 80 DHEFLSKAVEEAYKGVECGDGGPFGAVVVR-SDEVVVSCHNMVLKHTDPTAHAEVTAVR 137
D + + A+E A K G+ P GAV+V + ++ N+ + +DPTAHAE+ A+R
Sbjct: 11 DEKMMRYALELADKAEALGEI-PVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALR 68
>sp|Q89AM8|Y236_BUCBP Uncharacterized protein bbp_236 OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=bbp_236 PE=3 SV=1
Length = 162
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 76 VQDRDHEFLSKAVEEAYKGVECGDGGPFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTA 135
+ D D F+ A+ A K E P GAV+V ++ ++ N + + DPTAHAE+ A
Sbjct: 1 MHDSDKYFMKCAIFLA-KISEMIGEVPVGAVLVFNNTIIGKGLNSSILNHDPTAHAEIKA 59
Query: 136 VR 137
+R
Sbjct: 60 LR 61
>sp|Q8P2R7|Y196_STRP8 Uncharacterized deaminase spyM18_0196 OS=Streptococcus pyogenes
serotype M18 (strain MGAS8232) GN=spyM18_0196 PE=3 SV=1
Length = 159
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 83 FLSKAVEEAYKGVECGDGGPFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTAVRE 138
F+ +A++EA K ++ + P G V+V+ E++ HN + HAE+ A+ E
Sbjct: 11 FMQEALKEAEKSLQKAEI-PIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINE 65
>sp|P0DA21|TADA_STRPQ tRNA-specific adenosine deaminase OS=Streptococcus pyogenes
serotype M3 (strain SSI-1) GN=tadA PE=3 SV=1
Length = 171
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 83 FLSKAVEEAYKGVECGDGGPFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTAVRE 138
F+ +A++EA K ++ + P G V+V+ E++ HN + HAE+ A+ E
Sbjct: 11 FMQEALKEAEKSLQKAEI-PIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINE 65
>sp|Q5XE14|TADA_STRP6 tRNA-specific adenosine deaminase OS=Streptococcus pyogenes
serotype M6 (strain ATCC BAA-946 / MGAS10394) GN=tadA
PE=1 SV=2
Length = 171
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 83 FLSKAVEEAYKGVECGDGGPFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTAVRE 138
F+ +A++EA K ++ + P G V+V+ E++ HN + HAE+ A+ E
Sbjct: 11 FMQEALKEAEKSLQKAEI-PIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINE 65
>sp|P0DA20|TADA_STRP3 tRNA-specific adenosine deaminase OS=Streptococcus pyogenes
serotype M3 (strain ATCC BAA-595 / MGAS315) GN=tadA PE=3
SV=1
Length = 171
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 83 FLSKAVEEAYKGVECGDGGPFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTAVRE 138
F+ +A++EA K ++ + P G V+V+ E++ HN + HAE+ A+ E
Sbjct: 11 FMQEALKEAEKSLQKAEI-PIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINE 65
>sp|P68999|TADA_STRP1 tRNA-specific adenosine deaminase OS=Streptococcus pyogenes
serotype M1 GN=tadA PE=3 SV=1
Length = 171
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 83 FLSKAVEEAYKGVECGDGGPFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTAVRE 138
F+ +A++EA K ++ + P G V+V+ E++ HN + HAE+ A+ E
Sbjct: 11 FMQEALKEAEKSLQKAEI-PIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINE 65
>sp|Q5SI38|TILS_THET8 tRNA(Ile)-lysidine synthase OS=Thermus thermophilus (strain HB8 /
ATCC 27634 / DSM 579) GN=tilS PE=3 SV=1
Length = 507
Score = 32.7 bits (73), Expect = 0.69, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 102 PFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTAVRE 138
P GAV+V V+ HN V DPTAHAE+ +RE
Sbjct: 393 PVGAVLVLPGRVL-RAHNRVEGLRDPTAHAEMLLLRE 428
>sp|Q72IF6|TILS_THET2 tRNA(Ile)-lysidine synthase OS=Thermus thermophilus (strain HB27 /
ATCC BAA-163 / DSM 7039) GN=tilS PE=3 SV=1
Length = 507
Score = 32.7 bits (73), Expect = 0.69, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 102 PFGAVVVRSDEVVVSCHNMVLKHTDPTAHAEVTAVRE 138
P GAV+V V+ HN V DPTAHAE+ +RE
Sbjct: 393 PVGAVLVLPGRVL-RAHNRVEGLRDPTAHAEMLLLRE 428
>sp|C1CXB5|PNP_DEIDV Polyribonucleotide nucleotidyltransferase OS=Deinococcus deserti
(strain VCD115 / DSM 17065 / LMG 22923) GN=pnp PE=3 SV=1
Length = 721
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 53 ANVVETKDGTISVASAFAAHQEAVQDRDHEFLSKA-VEEAYKGVECGDGGPFGAVV 107
A V +DGTI V SA A EAV+ R +A V E Y+G PFGA V
Sbjct: 588 AQVTIEEDGTIRVFSADGAAAEAVRARIAGLTKEAKVGEEYEGTVV-KTAPFGAFV 642
>sp|Q9ZCC6|Y831_RICPR Uncharacterized deaminase RP831 OS=Rickettsia prowazekii (strain
Madrid E) GN=RP831 PE=3 SV=1
Length = 148
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 102 PFGAVVV--RSDEVVVSCHNMVLKHTDPTAHAEVTAV 136
P G V+V + +++VS HN + + +P HAE+ A+
Sbjct: 18 PVGVVIVCRLNQKIIVSSHNNIEEKKNPLCHAEIIAI 54
>sp|Q54EP7|SRP72_DICDI Signal recognition particle 72 kDa protein homolog OS=Dictyostelium
discoideum GN=srp72 PE=3 SV=1
Length = 672
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 26 STSVLESQLTTSTTFIHFINNNNNMEEANVVETKDGTISVASAFAAHQEAVQDRDHEFLS 85
+T ++SQL + I+ ++NNN + NV+E D ++S+ A + A+ ++ + L
Sbjct: 382 TTGSIKSQLLLAQ--IYLLDNNNVAKALNVLEKLDSSVSLRPGIVATKVALYEKSGD-LE 438
Query: 86 KAV 88
KAV
Sbjct: 439 KAV 441
>sp|Q5SNL7|FAN1_ORYSJ Fanconi-associated nuclease 1 homolog OS=Oryza sativa subsp.
japonica GN=Os06g0171800 PE=3 SV=1
Length = 964
Score = 29.3 bits (64), Expect = 7.5, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 14 CLAQHSTDSDLFSTSVLESQLTTSTTFIHFINNNNNMEEANVVETKDGTISVASAF 69
CL + T L +++L+ + T + +NN N +EA +E DG +S AF
Sbjct: 87 CLTR-GTKRKLTQSTLLDFSFSRKATDDYALNNLNTSDEAEHMEPTDGNVSSDGAF 141
>sp|Q8VFC9|OL474_MOUSE Olfactory receptor 474 OS=Mus musculus GN=Olfr474 PE=2 SV=1
Length = 310
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 1 MVIIKIPICAVGTCLAQHSTDSDLFSTSVLESQLTTST------TFIHFINNNNNMEEAN 54
+VI IC + T L HSTD + S S LT T TFI+ + +N E N
Sbjct: 212 LVIAVFYICILMTILKMHSTDGCHKAFSTCNSYLTAVTLYYGTITFIYVMPKSNYSTEKN 271
Query: 55 VVETKDGTISVASAFAAHQEAVQDRD-HEFLSKAVEEAY 92
V ++ T+ V ++++RD + L KA+ Y
Sbjct: 272 KVLSEFYTV-VIPMLNHLIYSLKNRDVKDALRKAIVRVY 309
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.128 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,779,302
Number of Sequences: 539616
Number of extensions: 1700154
Number of successful extensions: 6259
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 6218
Number of HSP's gapped (non-prelim): 60
length of query: 138
length of database: 191,569,459
effective HSP length: 103
effective length of query: 35
effective length of database: 135,989,011
effective search space: 4759615385
effective search space used: 4759615385
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)