BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036432
         (81 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2ZF5|O Chain O, Crystal Structure Of Highly Thermostable Glycerol Kinase
           From A Hyperthermophilic Archaeon
 pdb|2ZF5|Y Chain Y, Crystal Structure Of Highly Thermostable Glycerol Kinase
           From A Hyperthermophilic Archaeon
          Length = 497

 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+L   VIRP  KETTALGAA+  GLA+  + +    A  E  K    F+P ++E+ R+
Sbjct: 414 ADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTREIA--ELWKAERIFEPKMDEKTRE 471

Query: 61  KKAESWCRAVERTFNLADI 79
           +  + W  AV+R    A +
Sbjct: 472 RLYKGWKEAVKRAMGWAKV 490


>pdb|4E1J|A Chain A, Crystal Structure Of Glycerol Kinase In Complex With
           Glycerol From Sinorhizobium Meliloti 1021
 pdb|4E1J|B Chain B, Crystal Structure Of Glycerol Kinase In Complex With
           Glycerol From Sinorhizobium Meliloti 1021
 pdb|4E1J|C Chain C, Crystal Structure Of Glycerol Kinase In Complex With
           Glycerol From Sinorhizobium Meliloti 1021
 pdb|4E1J|D Chain D, Crystal Structure Of Glycerol Kinase In Complex With
           Glycerol From Sinorhizobium Meliloti 1021
          Length = 520

 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           +DLL +PV RP   ETTALG A+  G   GV+  +E FA   WA+    F+P  +E  RK
Sbjct: 446 SDLLDAPVDRPVILETTALGVAWLAGSRAGVWPNQEAFAK-SWAR-DRRFEPHXDEATRK 503

Query: 61  KKAESWCRAVERTF 74
            K + W  AV+RT 
Sbjct: 504 VKLKGWRSAVKRTL 517


>pdb|2D4W|A Chain A, Crystal Structure Of Glycerol Kinase From Cellulomonas Sp.
           Nt3060
 pdb|2D4W|B Chain B, Crystal Structure Of Glycerol Kinase From Cellulomonas Sp.
           Nt3060
          Length = 504

 Score = 50.4 bits (119), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 2/78 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD LG  V+RP   ETTALGAA+A G+A+G +K E+      WA+    + P +    R+
Sbjct: 424 ADQLGVDVVRPKVAETTALGAAYAAGIAVGFWKGEQDVID-NWAE-DKRWSPSMESGERE 481

Query: 61  KKAESWCRAVERTFNLAD 78
           +   +W +AV +T    D
Sbjct: 482 RLYRNWKKAVTKTMEWVD 499


>pdb|3G25|A Chain A, 1.9 Angstrom Crystal Structure Of Glycerol Kinase (Glpk)
           From Staphylococcus Aureus In Complex With Glycerol.
 pdb|3G25|B Chain B, 1.9 Angstrom Crystal Structure Of Glycerol Kinase (Glpk)
           From Staphylococcus Aureus In Complex With Glycerol.
 pdb|3G25|C Chain C, 1.9 Angstrom Crystal Structure Of Glycerol Kinase (Glpk)
           From Staphylococcus Aureus In Complex With Glycerol.
 pdb|3G25|D Chain D, 1.9 Angstrom Crystal Structure Of Glycerol Kinase (Glpk)
           From Staphylococcus Aureus In Complex With Glycerol.
 pdb|3GE1|A Chain A, 2.7 Angstrom Crystal Structure Of Glycerol Kinase (glpk)
           From Staphylococcus Aureus In Complex With Adp And
           Glycerol
 pdb|3GE1|B Chain B, 2.7 Angstrom Crystal Structure Of Glycerol Kinase (glpk)
           From Staphylococcus Aureus In Complex With Adp And
           Glycerol
 pdb|3GE1|C Chain C, 2.7 Angstrom Crystal Structure Of Glycerol Kinase (glpk)
           From Staphylococcus Aureus In Complex With Adp And
           Glycerol
 pdb|3GE1|D Chain D, 2.7 Angstrom Crystal Structure Of Glycerol Kinase (glpk)
           From Staphylococcus Aureus In Complex With Adp And
           Glycerol
          Length = 501

 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD++ + V RP  +ETTALGAAF  GLA+G ++ ++  A   W K    F P  +E  R+
Sbjct: 425 ADIVNTSVERPEIQETTALGAAFLAGLAVGFWESKDDIAK-NW-KLEEKFDPKXDEGERE 482

Query: 61  KKAESWCRAVERT 73
           K    W +AVE T
Sbjct: 483 KLYRGWKKAVEAT 495


>pdb|1R59|O Chain O, Enterococcus Casseliflavus Glycerol Kinase
 pdb|1R59|X Chain X, Enterococcus Casseliflavus Glycerol Kinase
          Length = 505

 Score = 45.4 bits (106), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 2/73 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+L   V R A+ ETTALGAA+  GLA+G +K+ +   S   A+    F P +  E R 
Sbjct: 423 ADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKS--MAEEGQMFTPEMPAEERD 480

Query: 61  KKAESWCRAVERT 73
              E W +AV  T
Sbjct: 481 NLYEGWKQAVAAT 493


>pdb|3H3N|X Chain X, Glycerol Kinase H232r With Glycerol
 pdb|3H3N|O Chain O, Glycerol Kinase H232r With Glycerol
 pdb|3H3O|O Chain O, Glycerol Kinase H232r With Ethylene Glycol
 pdb|3H3O|X Chain X, Glycerol Kinase H232r With Ethylene Glycol
 pdb|3H3O|B Chain B, Glycerol Kinase H232r With Ethylene Glycol
 pdb|3H3O|C Chain C, Glycerol Kinase H232r With Ethylene Glycol
          Length = 506

 Score = 45.4 bits (106), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 2/73 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+L   V R A+ ETTALGAA+  GLA+G +K+ +   S   A+    F P +  E R 
Sbjct: 424 ADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKS--MAEEGQMFTPEMPAEERD 481

Query: 61  KKAESWCRAVERT 73
              E W +AV  T
Sbjct: 482 NLYEGWKQAVAAT 494


>pdb|3FLC|O Chain O, Crystal Structure Of The His-Tagged H232r Mutant Of
           Glycerol Kinase From Enterococcus Casseliflavus With
           Glycerol
 pdb|3FLC|X Chain X, Crystal Structure Of The His-Tagged H232r Mutant Of
           Glycerol Kinase From Enterococcus Casseliflavus With
           Glycerol
          Length = 518

 Score = 45.4 bits (106), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 2/73 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+L   V R A+ ETTALGAA+  GLA+G +K+ +   S   A+    F P +  E R 
Sbjct: 436 ADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKS--MAEEGQMFTPEMPAEERD 493

Query: 61  KKAESWCRAVERT 73
              E W +AV  T
Sbjct: 494 NLYEGWKQAVAAT 506


>pdb|3H45|X Chain X, Glycerol Kinase H232e With Ethylene Glycol
 pdb|3H45|O Chain O, Glycerol Kinase H232e With Ethylene Glycol
 pdb|3H45|C Chain C, Glycerol Kinase H232e With Ethylene Glycol
 pdb|3H45|D Chain D, Glycerol Kinase H232e With Ethylene Glycol
 pdb|3H46|X Chain X, Glycerol Kinase H232e With Glycerol
 pdb|3H46|O Chain O, Glycerol Kinase H232e With Glycerol
          Length = 506

 Score = 45.1 bits (105), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 2/73 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+L   V R A+ ETTALGAA+  GLA+G +K+ +   S   A+    F P +  E R 
Sbjct: 424 ADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKS--MAEEGQMFTPEMPAEERD 481

Query: 61  KKAESWCRAVERT 73
              E W +AV  T
Sbjct: 482 NLYEGWKQAVAAT 494


>pdb|3D7E|O Chain O, Enterococcus Casseliflavus Glycerol Kinase Mutant
           His232ala Complexed With Glycerol
 pdb|3D7E|X Chain X, Enterococcus Casseliflavus Glycerol Kinase Mutant
           His232ala Complexed With Glycerol
          Length = 505

 Score = 45.1 bits (105), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 2/73 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+L   V R A+ ETTALGAA+  GLA+G +K+ +   S   A+    F P +  E R 
Sbjct: 423 ADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKS--MAEEGQMFTPEMPAEERD 480

Query: 61  KKAESWCRAVERT 73
              E W +AV  T
Sbjct: 481 NLYEGWKQAVAAT 493


>pdb|1BU6|O Chain O, Crystal Structures Of Escherichia Coli Glycerol Kinase And
           The Mutant A65t In An Inactive Tetramer: Conformational
           Changes And Implications For Allosteric Regulation
 pdb|1BU6|Y Chain Y, Crystal Structures Of Escherichia Coli Glycerol Kinase And
           The Mutant A65t In An Inactive Tetramer: Conformational
           Changes And Implications For Allosteric Regulation
 pdb|1BU6|Z Chain Z, Crystal Structures Of Escherichia Coli Glycerol Kinase And
           The Mutant A65t In An Inactive Tetramer: Conformational
           Changes And Implications For Allosteric Regulation
 pdb|1BU6|X Chain X, Crystal Structures Of Escherichia Coli Glycerol Kinase And
           The Mutant A65t In An Inactive Tetramer: Conformational
           Changes And Implications For Allosteric Regulation
          Length = 501

 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           +D+LG+ V RP  +E TALGAA+  GLA+G ++  +     E A     F+P +    R 
Sbjct: 423 SDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQ--EKAVIEREFRPGIETTERN 480

Query: 61  KKAESWCRAVER 72
            +   W +AV+R
Sbjct: 481 YRYAGWKKAVKR 492


>pdb|1GLA|G Chain G, Structure Of The Regulatory Complex Of Escherichia Coli
           Iiiglc With Glycerol Kinase
 pdb|1GLB|G Chain G, Structure Of The Regulatory Complex Of Escherichia Coli
           Iiiglc With Glycerol Kinase
 pdb|1GLC|G Chain G, Cation Promoted Association (Cpa) Of A Regulatory And
           Target Protein Is Controlled By Phosphorylation
 pdb|1GLD|G Chain G, Cation Promoted Association (Cpa) Of A Regulatory And
           Target Protein Is Controlled By Phosphorylation
 pdb|1GLE|G Chain G, Cation Promoted Association (Cpa) Of A Regulatory And
           Target Protein Is Controlled By Phosphorylation
 pdb|1GLF|O Chain O, Crystal Structures Of Escherichia Coli Glycerol Kinase And
           The Mutant A65t In An Inactive Tetramer: Conformational
           Changes And Implications For Allosteric Regulation
 pdb|1GLF|Y Chain Y, Crystal Structures Of Escherichia Coli Glycerol Kinase And
           The Mutant A65t In An Inactive Tetramer: Conformational
           Changes And Implications For Allosteric Regulation
 pdb|1GLF|Z Chain Z, Crystal Structures Of Escherichia Coli Glycerol Kinase And
           The Mutant A65t In An Inactive Tetramer: Conformational
           Changes And Implications For Allosteric Regulation
 pdb|1GLF|X Chain X, Crystal Structures Of Escherichia Coli Glycerol Kinase And
           The Mutant A65t In An Inactive Tetramer: Conformational
           Changes And Implications For Allosteric Regulation
 pdb|1BOT|O Chain O, Crystal Structure Of The Complex Between Escherichia Coli
           Glycerol Kinase And The Allosteric Regulator Fructose
           1,6-bisphosphate.
 pdb|1BOT|Z Chain Z, Crystal Structure Of The Complex Between Escherichia Coli
           Glycerol Kinase And The Allosteric Regulator Fructose
           1,6-bisphosphate.
 pdb|1BO5|O Chain O, Crystal Structure Of The Complex Between Escherichia Coli
           Glycerol Kinase And The Allosteric Regulator Fructose
           1,6-bisphosphate.
 pdb|1BO5|Z Chain Z, Crystal Structure Of The Complex Between Escherichia Coli
           Glycerol Kinase And The Allosteric Regulator Fructose
           1,6-bisphosphate
          Length = 501

 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           +D+LG+ V RP  +E TALGAA+  GLA+G ++  +     E A     F+P +    R 
Sbjct: 423 SDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQ--EKAVIEREFRPGIETTERN 480

Query: 61  KKAESWCRAVER 72
            +   W +AV+R
Sbjct: 481 YRYAGWKKAVKR 492


>pdb|1BWF|Y Chain Y, Escherichia Coli Glycerol Kinase Mutant With Bound Atp
           Analog Showing Substantial Domain Motion
 pdb|1BWF|O Chain O, Escherichia Coli Glycerol Kinase Mutant With Bound Atp
           Analog Showing Substantial Domain Motion
 pdb|1GLJ|Y Chain Y, Escherichia Coli Glycerol Kinase Mutant With Bound Atp
           Analog Showing Substantial Domain Motion
 pdb|1GLJ|O Chain O, Escherichia Coli Glycerol Kinase Mutant With Bound Atp
           Analog Showing Substantial Domain Motion
 pdb|1GLL|Y Chain Y, Escherichia Coli Glycerol Kinase Mutant With Bound Atp
           Analog Showing Substantial Domain Motion
 pdb|1GLL|O Chain O, Escherichia Coli Glycerol Kinase Mutant With Bound Atp
           Analog Showing Substantial Domain Motion
          Length = 501

 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           +D+LG+ V RP  +E TALGAA+  GLA+G ++  +     E A     F+P +    R 
Sbjct: 423 SDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQ--EKAVIEREFRPGIETTERN 480

Query: 61  KKAESWCRAVER 72
            +   W +AV+R
Sbjct: 481 YRYAGWKKAVKR 492


>pdb|1XUP|O Chain O, Enterococcus Casseliflavus Glycerol Kinase Complexed With
           Glycerol
 pdb|1XUP|X Chain X, Enterococcus Casseliflavus Glycerol Kinase Complexed With
           Glycerol
          Length = 487

 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           AD+L   V R A+ ETTALGAA+  GLA+G +K+ +   S   A+    F P +  E R 
Sbjct: 419 ADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKS--MAEEGQMFTPEMPAEERD 476

Query: 61  KKAESWCRAV 70
              E W +AV
Sbjct: 477 NLYEGWKQAV 486


>pdb|3EZW|A Chain A, Crystal Structure Of A Hyperactive Escherichia Coli
           Glycerol Kinase Mutant Gly230 --> Asp Obtained Using
           Microfluidic Crystallization Devices
 pdb|3EZW|B Chain B, Crystal Structure Of A Hyperactive Escherichia Coli
           Glycerol Kinase Mutant Gly230 --> Asp Obtained Using
           Microfluidic Crystallization Devices
 pdb|3EZW|E Chain E, Crystal Structure Of A Hyperactive Escherichia Coli
           Glycerol Kinase Mutant Gly230 --> Asp Obtained Using
           Microfluidic Crystallization Devices
 pdb|3EZW|G Chain G, Crystal Structure Of A Hyperactive Escherichia Coli
           Glycerol Kinase Mutant Gly230 --> Asp Obtained Using
           Microfluidic Crystallization Devices
 pdb|3EZW|C Chain C, Crystal Structure Of A Hyperactive Escherichia Coli
           Glycerol Kinase Mutant Gly230 --> Asp Obtained Using
           Microfluidic Crystallization Devices
 pdb|3EZW|D Chain D, Crystal Structure Of A Hyperactive Escherichia Coli
           Glycerol Kinase Mutant Gly230 --> Asp Obtained Using
           Microfluidic Crystallization Devices
 pdb|3EZW|F Chain F, Crystal Structure Of A Hyperactive Escherichia Coli
           Glycerol Kinase Mutant Gly230 --> Asp Obtained Using
           Microfluidic Crystallization Devices
 pdb|3EZW|H Chain H, Crystal Structure Of A Hyperactive Escherichia Coli
           Glycerol Kinase Mutant Gly230 --> Asp Obtained Using
           Microfluidic Crystallization Devices
          Length = 526

 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           +D+LG+ V RP  +E TALGAA+  GLA+G ++  +     E A     F+P +    R 
Sbjct: 423 SDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQ--EKAVIEREFRPGIETTERN 480

Query: 61  KKAESWCRAVER 72
            +   W +AV+R
Sbjct: 481 YRYAGWKKAVKR 492


>pdb|2DPN|A Chain A, Crystal Structure Of The Glycerol Kinase From Thermus
           Thermophilus Hb8
 pdb|2DPN|B Chain B, Crystal Structure Of The Glycerol Kinase From Thermus
           Thermophilus Hb8
          Length = 495

 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           ADLLG PV  P   ETTALGAA   G+  G    E++  +G + + +  F P + E  R+
Sbjct: 419 ADLLGVPVAVPEVTETTALGAALMAGVGAGALSPEDV--AGRF-REAERFLPTMPEGRRE 475

Query: 61  KKAESWCRAVER 72
                W  AVER
Sbjct: 476 ALYRRWREAVER 487


>pdb|2W40|A Chain A, Crystal Structure Of Plasmodium Falciparum Glycerol Kinase
           With Bound Glycerol
 pdb|2W40|B Chain B, Crystal Structure Of Plasmodium Falciparum Glycerol Kinase
           With Bound Glycerol
 pdb|2W40|C Chain C, Crystal Structure Of Plasmodium Falciparum Glycerol Kinase
           With Bound Glycerol
 pdb|2W40|D Chain D, Crystal Structure Of Plasmodium Falciparum Glycerol Kinase
           With Bound Glycerol
          Length = 503

 Score = 27.7 bits (60), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           +D++ + +     KE T+LGAA   GL + ++   +   S    ++   F   ++++ RK
Sbjct: 428 SDIINTKIEVSKYKEVTSLGAAVLAGLEVKIWDSLDSVKS-LLRRSDAVFHSKMDDKKRK 486

Query: 61  KKAESWCRAVERTF 74
           KK   W +AVERT 
Sbjct: 487 KKTSEWNKAVERTL 500


>pdb|2W41|A Chain A, Crystal Structure Of Plasmodium Falciparum Glycerol Kinase
           With Adp
 pdb|2W41|B Chain B, Crystal Structure Of Plasmodium Falciparum Glycerol Kinase
           With Adp
          Length = 507

 Score = 27.7 bits (60), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 1   ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRK 60
           +D++ + +     KE T+LGAA   GL + ++   +   S    ++   F   ++++ RK
Sbjct: 432 SDIINTKIEVSKYKEVTSLGAAVLAGLEVKIWDSLDSVKS-LLRRSDAVFHSKMDDKKRK 490

Query: 61  KKAESWCRAVERTF 74
           KK   W +AVERT 
Sbjct: 491 KKTSEWNKAVERTL 504


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.314    0.130    0.379 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,329,199
Number of Sequences: 62578
Number of extensions: 79145
Number of successful extensions: 150
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 130
Number of HSP's gapped (non-prelim): 19
length of query: 81
length of database: 14,973,337
effective HSP length: 50
effective length of query: 31
effective length of database: 11,844,437
effective search space: 367177547
effective search space used: 367177547
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 45 (21.9 bits)