Query 036432
Match_columns 81
No_of_seqs 216 out of 1013
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 21:50:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036432.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036432hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ezw_A Glycerol kinase; glycer 99.8 7.8E-21 2.7E-25 130.5 5.3 78 1-80 423-500 (526)
2 3g25_A Glycerol kinase; IDP007 99.7 2.3E-18 7.7E-23 117.7 5.3 76 1-78 425-500 (501)
3 2p3r_A Glycerol kinase; glycer 99.7 2.5E-18 8.6E-23 117.8 5.5 78 1-80 422-499 (510)
4 3h3n_X Glycerol kinase; ATP-bi 99.7 5.6E-18 1.9E-22 115.9 6.9 75 1-77 424-498 (506)
5 2d4w_A Glycerol kinase; alpha 99.7 7.2E-18 2.4E-22 115.3 6.1 78 1-80 424-501 (504)
6 4e1j_A Glycerol kinase; struct 99.7 2.7E-17 9.3E-22 112.9 6.2 73 1-75 446-518 (520)
7 2zf5_O Glycerol kinase; hypert 99.7 5.4E-17 1.9E-21 110.7 5.9 75 1-77 414-488 (497)
8 2w40_A Glycerol kinase, putati 99.7 5.9E-17 2E-21 110.7 6.1 75 1-76 428-502 (503)
9 3l0q_A Xylulose kinase; xlylul 99.7 3.5E-17 1.2E-21 113.0 4.7 76 1-77 463-540 (554)
10 3ifr_A Carbohydrate kinase, FG 99.6 9E-17 3.1E-21 110.1 4.6 74 1-76 421-495 (508)
11 3ll3_A Gluconate kinase; xylul 99.6 1.2E-16 4E-21 109.4 5.0 74 1-76 414-488 (504)
12 2dpn_A Glycerol kinase; thermu 99.6 1.6E-16 5.6E-21 108.3 5.6 75 1-78 419-493 (495)
13 4bc3_A Xylulose kinase; transf 99.6 2.4E-16 8.3E-21 108.5 6.4 75 1-76 455-532 (538)
14 3hz6_A Xylulokinase; xylulose, 99.6 4.1E-16 1.4E-20 106.9 5.2 75 1-76 423-502 (511)
15 3jvp_A Ribulokinase; PSI-II, N 99.6 1.2E-15 4.3E-20 105.6 5.3 74 1-74 461-539 (572)
16 2itm_A Xylulose kinase, xylulo 99.6 1.8E-15 6.2E-20 102.9 5.2 74 1-76 407-482 (484)
17 2uyt_A Rhamnulokinase; rhamnos 99.0 7.4E-11 2.5E-15 80.2 2.7 68 1-71 414-486 (489)
18 3i8b_A Xylulose kinase; strain 98.7 7.2E-09 2.5E-13 71.2 3.7 52 1-56 445-496 (515)
19 3h6e_A Carbohydrate kinase, FG 98.1 4E-07 1.4E-11 62.2 0.8 59 1-72 408-470 (482)
20 1hux_A Activator of (R)-2-hydr 95.9 0.0015 5.1E-08 41.4 0.4 28 1-28 229-257 (270)
21 4ehu_A Activator of 2-hydroxyi 87.1 0.27 9.1E-06 30.7 1.6 27 2-28 228-255 (276)
22 3f9m_A Glucokinase; hexokinase 81.3 0.76 2.6E-05 31.6 2.0 26 5-30 438-463 (470)
23 3o8m_A Hexokinase; rnaseh-like 78.6 0.95 3.2E-05 31.2 1.8 26 5-30 447-472 (485)
24 3hm8_A Hexokinase-3; glucose, 77.4 1.1 3.7E-05 30.6 1.8 25 6-30 415-439 (445)
25 2yhx_A Hexokinase B; transfera 71.4 1.8 6.3E-05 29.5 1.7 26 5-30 420-445 (457)
26 3doe_B ADP-ribosylation factor 64.1 2.7 9.1E-05 25.0 1.2 28 48-75 52-80 (165)
27 3i33_A Heat shock-related 70 k 59.2 6.1 0.00021 25.7 2.4 27 3-29 374-402 (404)
28 3trh_A Phosphoribosylaminoimid 58.9 6.9 0.00024 23.3 2.3 27 5-31 112-138 (169)
29 3qfu_A 78 kDa glucose-regulate 58.1 8.7 0.0003 24.7 3.0 25 3-27 366-392 (394)
30 3kuu_A Phosphoribosylaminoimid 56.9 7.9 0.00027 23.2 2.4 26 5-30 118-143 (174)
31 4b9q_A Chaperone protein DNAK; 52.1 8.9 0.0003 26.8 2.4 31 3-33 356-387 (605)
32 3ors_A N5-carboxyaminoimidazol 51.6 11 0.00037 22.4 2.3 26 5-30 109-134 (163)
33 1xmp_A PURE, phosphoribosylami 51.4 11 0.00039 22.4 2.4 26 5-30 117-142 (170)
34 4grd_A N5-CAIR mutase, phospho 51.1 14 0.00048 22.1 2.8 27 5-31 118-144 (173)
35 1bdg_A Hexokinase; phosphotran 49.6 6.3 0.00022 26.7 1.3 23 6-28 425-447 (451)
36 1cza_N Hexokinase type I; stru 48.6 7.7 0.00026 28.7 1.6 24 7-30 887-910 (917)
37 2i7n_A Pantothenate kinase 1; 48.1 12 0.00042 24.8 2.4 21 5-25 337-358 (360)
38 3oow_A Phosphoribosylaminoimid 44.7 20 0.00069 21.3 2.8 26 5-30 111-136 (166)
39 4b4k_A N5-carboxyaminoimidazol 44.4 24 0.00082 21.3 3.1 27 5-31 128-154 (181)
40 1cza_N Hexokinase type I; stru 42.4 13 0.00043 27.6 2.0 24 8-31 440-463 (917)
41 4dzo_A Mitotic spindle assembl 40.8 21 0.00072 20.0 2.3 22 58-80 26-47 (123)
42 2jy0_A Protease NS2-3; membran 40.4 3.5 0.00012 17.2 -0.7 15 14-28 4-18 (27)
43 1u11_A PURE (N5-carboxyaminoim 37.5 30 0.001 20.8 2.8 26 5-30 127-152 (182)
44 4gni_A Putative heat shock pro 33.3 21 0.00073 23.2 1.8 18 11-28 384-401 (409)
45 1dkg_D Molecular chaperone DNA 30.5 18 0.0006 23.3 1.0 24 3-26 356-380 (383)
46 3clq_A Uncharacterized protein 30.5 50 0.0017 22.5 3.2 40 15-55 59-98 (421)
47 1jce_A ROD shape-determining p 27.6 26 0.00089 22.1 1.5 24 3-26 300-324 (344)
48 3d2f_A Heat shock protein homo 26.2 34 0.0011 24.4 1.9 28 3-30 357-385 (675)
49 2yhw_A Bifunctional UDP-N-acet 25.5 57 0.0019 20.6 2.8 23 5-27 316-338 (343)
50 2ctr_A DNAJ homolog subfamily 25.5 56 0.0019 16.6 2.3 40 34-74 20-60 (88)
51 3lp6_A Phosphoribosylaminoimid 22.2 69 0.0024 19.1 2.5 25 5-31 113-137 (174)
52 2v7y_A Chaperone protein DNAK; 21.9 63 0.0022 21.9 2.6 28 3-30 325-353 (509)
53 1sz2_A Glucokinase, glucose ki 21.7 88 0.003 19.7 3.1 23 5-27 304-326 (332)
54 1o4v_A Phosphoribosylaminoimid 20.7 77 0.0026 19.1 2.5 25 5-31 119-143 (183)
55 4g9i_A Hydrogenase maturation 20.0 48 0.0017 24.2 1.7 22 11-32 743-764 (772)
No 1
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=99.82 E-value=7.8e-21 Score=130.50 Aligned_cols=78 Identities=31% Similarity=0.565 Sum_probs=70.0
Q ss_pred CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchhhcc
Q 036432 1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLADIS 80 (81)
Q Consensus 1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~~~~ 80 (81)
|||||+||.++...|++|+|||++|++|+|.|++++++ .++... .++|+|++++..|+++|++|+++|+++++|.+.|
T Consensus 423 ADvlg~pV~~~~~~E~~alGAA~lA~~a~G~~~~~~e~-~~~~~~-~~~~~P~~~~~~~~~~y~~w~~av~r~~~w~~~~ 500 (526)
T 3ezw_A 423 SDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDEL-QEKAVI-EREFRPGIETTERNYRYAGWKKAVKRAMAWEEHD 500 (526)
T ss_dssp HHHHTSEEEEESCCCHHHHHHHHHHHHHTTSSSCGGGS-TTCCCE-EEEECCCSCHHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred HHHHCCEEEeCCCCchHHHHHHHHHHHHhCCCCCHHHH-HHhcCC-CeEEcCCCCHHHHHHHHHHHHHHHHHHhCchHHH
Confidence 79999999999999999999999999999999999887 555553 6799999999888889999999999999996543
No 2
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=99.73 E-value=2.3e-18 Score=117.68 Aligned_cols=76 Identities=38% Similarity=0.643 Sum_probs=69.3
Q ss_pred CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchhh
Q 036432 1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLAD 78 (81)
Q Consensus 1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~~ 78 (81)
|||||+||.++...|++|+|||++|++++|.|++++++ .++.+. .++|+|++++..|+++|++|+++|+++++|..
T Consensus 425 Adv~g~pV~~~~~~e~~alGaA~la~~a~G~~~~~~~~-~~~~~~-~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~~ 500 (501)
T 3g25_A 425 ADIVNTSVERPEIQETTALGAAFLAGLAVGFWESKDDI-AKNWKL-EEKFDPKMDEGEREKLYRGWKKAVEATQVFKT 500 (501)
T ss_dssp HHHHTSEEEEESCCCHHHHHHHHHHHHHTTSSSCTHHH-HHHCCE-EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHhCCceEecCCCcchHHHHHHHHHHHhCccCCHHHH-HHhccC-CeEECCCCCHHHHHHHHHHHHHHHHHHhcccc
Confidence 69999999999999999999999999999999999887 666663 67899999988899999999999999999953
No 3
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=99.73 E-value=2.5e-18 Score=117.77 Aligned_cols=78 Identities=31% Similarity=0.565 Sum_probs=70.2
Q ss_pred CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchhhcc
Q 036432 1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLADIS 80 (81)
Q Consensus 1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~~~~ 80 (81)
|||||+||.++...|++|+|||++|++++|.|++++++ .++.+. .++|+|+++...|+++|++|+++|+++++|.+++
T Consensus 422 ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~~~~-~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 499 (510)
T 2p3r_A 422 SDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDEL-QEKAVI-EREFRPGIETTERNYRYAGWKKAVKRAMAWEEHD 499 (510)
T ss_dssp HHHHTSEEEEESCCCHHHHHHHHHHHHHHTSSSCGGGG-TTCCCE-EEEECCCSCHHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred HHHhCCceEecCCCCcHHHHHHHHHHHHhCccCCHHHH-HHhcCC-CeEECCCCCHHHHHHHHHHHHHHHHHHhhhhccC
Confidence 69999999999999999999999999999999999886 666663 6789999987899999999999999999996543
No 4
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=99.73 E-value=5.6e-18 Score=115.92 Aligned_cols=75 Identities=37% Similarity=0.539 Sum_probs=69.0
Q ss_pred CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchh
Q 036432 1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLA 77 (81)
Q Consensus 1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~ 77 (81)
|||||+||.++...|++|+|||++|++++|.|++++++ .++.+. .++|+|++++..|+++|++|+++|+++++|.
T Consensus 424 ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~~~~-~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~ 498 (506)
T 3h3n_X 424 ADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDEL-KSMAEE-GQMFTPEMPAEERDNLYEGWKQAVAATQTFK 498 (506)
T ss_dssp HHHHTSEEEECSSSCHHHHHHHHHHHHHTTSSCSHHHH-HTTCCC-CCEECCCSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHhCCeEEecCCCcchhHHHHHHHHHHhCccCCHHHH-HHhcCC-CeEECCCCCHHHHHHHHHHHHHHHHHHhhhh
Confidence 69999999999999999999999999999999999887 666664 7799999998889999999999999999984
No 5
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=99.72 E-value=7.2e-18 Score=115.28 Aligned_cols=78 Identities=38% Similarity=0.673 Sum_probs=69.9
Q ss_pred CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchhhcc
Q 036432 1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLADIS 80 (81)
Q Consensus 1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~~~~ 80 (81)
|||||+||.++...|++|+|||++|++++|.|++++++ ..+... .++|+|++++..|+++|++|+++|++++.|.+.|
T Consensus 424 Adv~g~pV~~~~~~e~~alGaA~lA~~~~G~~~~~~~~-~~~~~~-~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~~~~ 501 (504)
T 2d4w_A 424 ADQLGVDVVRPKVAETTALGAAYAAGIAVGFWKGEQDV-IDNWAE-DKRWSPSMESGERERLYRNWKKAVTKTMEWVDED 501 (504)
T ss_dssp HHHHTSCEEEESCSCHHHHHHHHHHHHHHTSSCSHHHH-HHHCCE-EEEECCCSCHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHhCCeEEeCCCCcchHHHHHHHHHhhcCccCCHHHH-HhhcCC-CeEEccCCCHHHHHHHHHHHHHHHHHHhccchhh
Confidence 69999999999999999999999999999999998887 555553 6789999988889999999999999999996655
No 6
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=99.69 E-value=2.7e-17 Score=112.93 Aligned_cols=73 Identities=44% Similarity=0.728 Sum_probs=66.2
Q ss_pred CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhc
Q 036432 1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFN 75 (81)
Q Consensus 1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~ 75 (81)
|||||+||.++...|++|+|||++|++++|.|++++++ .++... .++|+|++++..|+++|++|+++++++++
T Consensus 446 ADvlg~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~~-~~~~~~-~~~~~P~~~~~~~~~~y~~~~~~~~~~~~ 518 (520)
T 4e1j_A 446 SDLLDAPVDRPVILETTALGVAWLAGSRAGVWPNQEAF-AKSWAR-DRRFEPHMDEATRKVKLKGWRSAVKRTLI 518 (520)
T ss_dssp HHHHTSCEEEESCCCHHHHHHHHHHHHHHTSSCCHHHH-HHTCCE-EEEECCCSCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhCCeEEecCCCccHHHHHHHHHHHHcCCcCCHHHH-HhhcCC-CeEECCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 69999999999999999999999999999999999887 566653 67899999998899999999999999864
No 7
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=99.67 E-value=5.4e-17 Score=110.72 Aligned_cols=75 Identities=39% Similarity=0.667 Sum_probs=67.7
Q ss_pred CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchh
Q 036432 1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLA 77 (81)
Q Consensus 1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~ 77 (81)
||+||+||.++...|++|+|||++|++++|.|++++++ ..+... .++|+|+++...|+++|+.|+++|++++.|.
T Consensus 414 Adv~g~pV~~~~~~e~~alGaA~lA~~~~g~~~~~~~~-~~~~~~-~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~ 488 (497)
T 2zf5_O 414 ADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTREI-AELWKA-ERIFEPKMDEKTRERLYKGWKEAVKRAMGWA 488 (497)
T ss_dssp HHHHTSCEEEESCSCHHHHHHHHHHHHHTTSSCCHHHH-HTTCCE-EEEECCCCCHHHHHHHHHHHHHHHHTTTTGG
T ss_pred HhhcCCeEEEcCCCcchHHHHHHHHHHHhCccCCHHHH-HHhcCC-CeEECCCccHHHHHHHHHHHHHHHHHHHhHh
Confidence 69999999999999999999999999999999999887 566553 6789999988789999999999999999984
No 8
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=99.67 E-value=5.9e-17 Score=110.69 Aligned_cols=75 Identities=29% Similarity=0.460 Sum_probs=66.5
Q ss_pred CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhch
Q 036432 1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNL 76 (81)
Q Consensus 1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~ 76 (81)
||+||+||.++...|++|+|||++|++++|.|++++++...+.+. .++|+|++++..|+++|++|+++|+++++|
T Consensus 428 Adv~g~pV~~~~~~e~~alGaA~la~~~~G~~~~~~~~~~~~~~~-~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~ 502 (503)
T 2w40_A 428 SDIINTKIEVSKYKEVTSLGAAVLAGLEVKIWDSLDSVKSLLRRS-DAVFHSKMDDKKRKKKTSEWNKAVERTLIQ 502 (503)
T ss_dssp HHHHTSCEEEESCSCHHHHHHHHHHHHHTTCSSCHHHHHHHHTCE-EEEECCCSCHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHCCeEEecCCCcchHHHHHHHHHHHhCccCCHHHHHHhccCC-CcEEccCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 699999999999999999999999999999999988873333543 568999998888999999999999999887
No 9
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=99.67 E-value=3.5e-17 Score=112.98 Aligned_cols=76 Identities=18% Similarity=0.234 Sum_probs=67.7
Q ss_pred CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeec-CCCHH-HHHHHHHHHHHHHHHHhchh
Q 036432 1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKP-VLNEE-GRKKKAESWCRAVERTFNLA 77 (81)
Q Consensus 1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P-~~~~~-~y~~~y~~~~~~~~~~~~~~ 77 (81)
|||||+||.+++..|++|+|||++|++++|.|+++++++..+.+. .++|+| ++++. .|+++|+.|+++|+.+..+.
T Consensus 463 ADv~g~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~a~~~~~~~-~~~~~P~~~~~~~~Y~~~y~~y~~l~~~~~~~~ 540 (554)
T 3l0q_A 463 ANATGCAMLLPEESEAMLLGSAMMGTVAAGVFESLPEAMAAMSRI-GKTVTPQTNKIKAYYDRKYRVFHQMYHDHMRYQ 540 (554)
T ss_dssp HHHHCCEEEEESCSCHHHHHHHHHHHHHTTSSSSHHHHHHHHCCE-EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhCCeEEecCCCcchHHHHHHHHHHHcCCcCCHHHHHHHhcCC-CcEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999999998864667664 678999 99875 89999999999999988763
No 10
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=99.65 E-value=9e-17 Score=110.05 Aligned_cols=74 Identities=16% Similarity=0.106 Sum_probs=66.4
Q ss_pred CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHH-HHHHHHHHHHHHHHHHhch
Q 036432 1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEE-GRKKKAESWCRAVERTFNL 76 (81)
Q Consensus 1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~-~y~~~y~~~~~~~~~~~~~ 76 (81)
|||||+||.+++..|++|+|||++|++++|.|++++++ .++.+. .++|+|++++. .|+++|++|+++++++...
T Consensus 421 ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~~~~-~~~~~P~~~~~~~y~~~y~~~~~~~~~~~~~ 495 (508)
T 3ifr_A 421 ADVLQRPVQLLANPLGSAVGAAWVAAIGGGDDLGWDDV-TALVRT-GEKITPDPAKAEVYDRLYRDFSALYATLHPF 495 (508)
T ss_dssp HHHHTSCEEEEECCSTHHHHHHHHHHHHTCSSCCGGGG-GGGSEE-EEEECCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCeEEecCCCCchHHHHHHHHHHHhCCCCCHHHH-HhhcCC-CeEECcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999887 566663 67899999874 8999999999999998764
No 11
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=99.65 E-value=1.2e-16 Score=109.38 Aligned_cols=74 Identities=15% Similarity=0.225 Sum_probs=66.7
Q ss_pred CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHH-HHHHHHHHHHHHHHHHhch
Q 036432 1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEE-GRKKKAESWCRAVERTFNL 76 (81)
Q Consensus 1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~-~y~~~y~~~~~~~~~~~~~ 76 (81)
|||||+||.++...|++|+|||++|++++|.|++++++ .++.+. .++|+|++++. .|+++|+.|+++|+++..+
T Consensus 414 ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~~~~-~~~~~P~~~~~~~Y~~~y~~y~~l~~~l~~~ 488 (504)
T 3ll3_A 414 ANIFNVPIVTMKEQQSGTLAAMFLARQALGLNQDLSEI-GQFAQA-DKVYFPNPKEAATYQKLFPLYCEIRNALAAS 488 (504)
T ss_dssp HHHHTSCEEEESCSCHHHHHHHHHHHHHTTSCCSGGGG-GGTSCE-EEEECCCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHhhCCeEEecCCCCchhHHHHHHHHHHcCccCCHHHH-HHhcCC-CeEEccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999998876 777664 67899999875 7999999999999998865
No 12
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=99.64 E-value=1.6e-16 Score=108.32 Aligned_cols=75 Identities=40% Similarity=0.595 Sum_probs=67.0
Q ss_pred CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHHHHHHHHHHHHHHHHHHhchhh
Q 036432 1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEEGRKKKAESWCRAVERTFNLAD 78 (81)
Q Consensus 1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~y~~~y~~~~~~~~~~~~~~~ 78 (81)
||+||+||.++...|++|+|||++|++++|.| +++++ ..+... .++|+|++++..|+++|++|+++|++++.|.+
T Consensus 419 Adv~g~pV~~~~~~e~~alGaA~la~~a~G~~-~~~~~-~~~~~~-~~~~~P~~~~~~y~~~~~~~~~~~~~~~~~~~ 493 (495)
T 2dpn_A 419 ADLLGVPVAVPEVTETTALGAALMAGVGAGAL-SPEDV-AGRFRE-AERFLPTMPEGRREALYRRWREAVERAKGWAR 493 (495)
T ss_dssp HHHHTSCEEEESCSCHHHHHHHHHHHHHHTSC-CHHHH-HHHCCE-EEEECCCSCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred HHHhCCeeEecCCcccHHHHHHHHHHhhcCcC-CHHHH-HHhcCC-CeEEccCCCHHHHHHHHHHHHHHHHHHhhhhh
Confidence 69999999999999999999999999999999 98887 555553 66899999888899999999999999999843
No 13
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=99.64 E-value=2.4e-16 Score=108.52 Aligned_cols=75 Identities=11% Similarity=0.057 Sum_probs=66.4
Q ss_pred CCcCCCceecCCCCchhHHHHHHHHHHhhcc--CCCHHHHHhccccccCceeecCCCHH-HHHHHHHHHHHHHHHHhch
Q 036432 1 ADLLGSPVIRPADKETTALGAAFADGLAIGV--FKEEEIFASGEWAKTSTTFKPVLNEE-GRKKKAESWCRAVERTFNL 76 (81)
Q Consensus 1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~--~~~~~~~~~~~~~~~~~~~~P~~~~~-~y~~~y~~~~~~~~~~~~~ 76 (81)
|||||+||.++...|++|+|||++|++++|. |++++++...+... .++|+|++++. .|+++|++|++++++++..
T Consensus 455 ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~ea~~~~~~~-~~~~~P~~~~~~~Y~~~y~~y~~l~~~~~~~ 532 (538)
T 4bc3_A 455 ADVFDAPVYVIDTANSACVGSAYRAFHGLAGGTDVPFSEVVKLAPNP-RLAATPSPGASQVYEALLPQYAKLEQRILSQ 532 (538)
T ss_dssp HHHHTSCEEECCCTTHHHHHHHHHHHHHHHTGGGSCHHHHHTTSCCC-EEEECCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCceEecCCCCchHHHHHHHHHHHhCcccCCCHHHHHHhhcCC-CeeECCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6999999999999999999999999999998 88998874556553 67899999985 7999999999999998765
No 14
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=99.61 E-value=4.1e-16 Score=106.86 Aligned_cols=75 Identities=21% Similarity=0.223 Sum_probs=63.6
Q ss_pred CCcCCCce-ecCCCCchhHHHHHHHHHHhhccCCCHHHHHhcc---ccccCceeecCCCHH-HHHHHHHHHHHHHHHHhc
Q 036432 1 ADLLGSPV-IRPADKETTALGAAFADGLAIGVFKEEEIFASGE---WAKTSTTFKPVLNEE-GRKKKAESWCRAVERTFN 75 (81)
Q Consensus 1 ADilg~~v-~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~---~~~~~~~~~P~~~~~-~y~~~y~~~~~~~~~~~~ 75 (81)
|||||+|| .++...|++|+|||++|++++|.++++++....+ .+. .++|+|++++. .|+++|++|+++++.+..
T Consensus 423 ADv~g~pV~~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~~~~~~~~~~-~~~~~P~~~~~~~y~~~y~~~~~~~~~l~~ 501 (511)
T 3hz6_A 423 ADNLNVSLLVKPDAHLHPLRGLAALAAVELEWSHSIQDFLREADLREPA-SNILHPQPCDEGRRRRKFERFKQCVETLGR 501 (511)
T ss_dssp HHHHTCEEEECCCGGGHHHHHHHHHHHHHTTSCSCHHHHHHHHHTC----CCCBCCCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHCCeeEEecCCCCchHHHHHHHHHHHhCCcCCHHHHHHHhhccCCC-CeEECcCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 69999999 9999999999999999999999999996543666 664 67899999875 799999999999998775
Q ss_pred h
Q 036432 76 L 76 (81)
Q Consensus 76 ~ 76 (81)
.
T Consensus 502 ~ 502 (511)
T 3hz6_A 502 L 502 (511)
T ss_dssp -
T ss_pred h
Confidence 4
No 15
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=99.59 E-value=1.2e-15 Score=105.62 Aligned_cols=74 Identities=26% Similarity=0.212 Sum_probs=63.9
Q ss_pred CCcCCCceecCCCCchhHHHHHHHHHHhhc----cCCCHHHHHhccccccCceeecCCCHH-HHHHHHHHHHHHHHHHh
Q 036432 1 ADLLGSPVIRPADKETTALGAAFADGLAIG----VFKEEEIFASGEWAKTSTTFKPVLNEE-GRKKKAESWCRAVERTF 74 (81)
Q Consensus 1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G----~~~~~~~~~~~~~~~~~~~~~P~~~~~-~y~~~y~~~~~~~~~~~ 74 (81)
|||||+||.++...|++|+|||++|++++| .|++++++...+.....++|+|++++. .|+++|+.|+++|+.+.
T Consensus 461 ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~~e~~~~~~~~~~~~~~P~~~~~~~Y~~~y~~y~~l~~~l~ 539 (572)
T 3jvp_A 461 ADVTNREIKVAASKQTPALGAAMFASVAAGSEVGGYDSIEEAAKKMGRVKDETFKPIPEHVAIYEKLYQEYVTLHDYFG 539 (572)
T ss_dssp HHHHTSCEEEBCCSSHHHHHHHHHHHHHHCSSSSSCSCHHHHHHHHCCBCSCCBCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCeeEecCCCccHHHHHHHHHHHhcCCCccccCCHHHHHHHhhccCCeEEeeCHHHHHHHHHHHHHHHHHHHHHh
Confidence 699999999999999999999999999999 999998874555442246899999875 89999999999999864
No 16
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=99.57 E-value=1.8e-15 Score=102.88 Aligned_cols=74 Identities=19% Similarity=0.163 Sum_probs=64.0
Q ss_pred CCcCCCceecCCCCch-hHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCHH-HHHHHHHHHHHHHHHHhch
Q 036432 1 ADLLGSPVIRPADKET-TALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNEE-GRKKKAESWCRAVERTFNL 76 (81)
Q Consensus 1 ADilg~~v~~~~~~e~-~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~-~y~~~y~~~~~~~~~~~~~ 76 (81)
||+||+||.+++..|. +|+|||++|++++|.+++++++ ..... ..++|+|++++. .|+++|++|+++++++..+
T Consensus 407 Adv~g~pV~~~~~~e~~~alGAA~lA~~~~g~~~~~~~~-~~~~~-~~~~~~P~~~~~~~y~~~y~~~~~~~~~~~~~ 482 (484)
T 2itm_A 407 ADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIEL-LPQLP-LEQSHLPDAQRYAAYQPRRETFRRLYQQLLPL 482 (484)
T ss_dssp HHHHCCCEEEESCTTSCHHHHHHHHHHHHHCTTSCHHHH-SCCCC-EEEEECCCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHhCCeEEeCCCCCcccHHHHHHHHHHHcCCcCCHHHH-HHhcC-CCeEECCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6999999999999996 9999999999999999998887 43333 256899999874 7999999999999998765
No 17
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=99.04 E-value=7.4e-11 Score=80.24 Aligned_cols=68 Identities=24% Similarity=0.162 Sum_probs=46.3
Q ss_pred CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHH---HHhccccccCceeecCCCHH--HHHHHHHHHHHHHH
Q 036432 1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEI---FASGEWAKTSTTFKPVLNEE--GRKKKAESWCRAVE 71 (81)
Q Consensus 1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~---~~~~~~~~~~~~~~P~~~~~--~y~~~y~~~~~~~~ 71 (81)
|||||+||.++. .|++++|||++|+++.+...++++ ++..+.. .++|+|++++. .|+++|++|+++.+
T Consensus 414 ADvlg~pV~~~~-~e~~alGaa~~A~~a~~~~~~~~~~~~~~~~~~~--~~~~~P~~~~~~~~Y~~~~~~y~~~~~ 486 (489)
T 2uyt_A 414 ADACGIRVIAGP-VEASTLGNIGIQLMTLDELNNVDDFRQVVSTTAN--LTTFTPNPDSEIAHYVALIHSTRQTKE 486 (489)
T ss_dssp HHHHTSEEEECC-TTHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHSC--CEEECCCTTSHHHHHHHHTTC------
T ss_pred HHHHCCeeecCC-ccHhHHHHHHHHHHHcCccccHHHHHHHHHhhCC--CeEECCCcchHHHHHHHHHHHhhchhh
Confidence 699999999887 799999998888887765544433 3233332 46899999765 68888888887643
No 18
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=98.73 E-value=7.2e-09 Score=71.23 Aligned_cols=52 Identities=25% Similarity=0.180 Sum_probs=41.5
Q ss_pred CCcCCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCCH
Q 036432 1 ADLLGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLNE 56 (81)
Q Consensus 1 ADilg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~ 56 (81)
|||||+||.++...|++|+|||++|++++|.+.+..+ +......+|+|.++.
T Consensus 445 ADvlg~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~----~~~~~~~~~~~~~~~ 496 (515)
T 3i8b_A 445 PSILGMDVTRPATDEYVAIGAARQAAWVLSGETEPPA----WQLTIDGVETGEPTE 496 (515)
T ss_dssp HHHHTSCEEEECCCCHHHHHHHHHHHHHHHCCSSCCC----CCCCEEEEECCCCCH
T ss_pred HHHhCCceEecCCcccHHHHHHHHHHHHcCCCCChhH----hhhhccccCCCCccH
Confidence 6999999999999999999999999999998866432 221124578888874
No 19
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=98.15 E-value=4e-07 Score=62.24 Aligned_cols=59 Identities=15% Similarity=0.092 Sum_probs=41.6
Q ss_pred CCc-CCCceecCCCCchhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCC---HHHHHHHHHHHHHHHHH
Q 036432 1 ADL-LGSPVIRPADKETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLN---EEGRKKKAESWCRAVER 72 (81)
Q Consensus 1 ADi-lg~~v~~~~~~e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~---~~~y~~~y~~~~~~~~~ 72 (81)
||| ||+||.+++..|++|+|||++|+++.-. . ....+.|... ...+...++.|++++..
T Consensus 408 ADv~~g~pV~~~~~~e~~alGAA~lA~~a~~~------------~-~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 470 (482)
T 3h6e_A 408 ASLRPDCAVYTANAHNDVSFGALRLIDPGLRP------------Q-GELVRIEPLDTGSWADLDTYRNRWQAEVEA 470 (482)
T ss_dssp HHHSTTSEEEEESSCCCTTGGGHHHHCTTCCC------------S-SCEEECCCCCC----CHHHHHHHHHHHHC-
T ss_pred hhhcCCCeEEEcCCCchHHHHHHHHhCccccc------------c-cccCcccccccccchHHHHHHHHHHHHhhc
Confidence 699 9999999999999999999999887211 0 1223444443 12466668899988654
No 20
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=95.95 E-value=0.0015 Score=41.41 Aligned_cols=28 Identities=25% Similarity=0.197 Sum_probs=24.0
Q ss_pred CCcCCCceecCCCCc-hhHHHHHHHHHHh
Q 036432 1 ADLLGSPVIRPADKE-TTALGAAFADGLA 28 (81)
Q Consensus 1 ADilg~~v~~~~~~e-~~alGAA~lA~~~ 28 (81)
+|+||+||.+|+..+ .+|+|||++|...
T Consensus 229 ~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 229 EEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 478999999999888 5999999998753
No 21
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=87.06 E-value=0.27 Score=30.67 Aligned_cols=27 Identities=30% Similarity=0.223 Sum_probs=20.8
Q ss_pred CcCCCceecCCC-CchhHHHHHHHHHHh
Q 036432 2 DLLGSPVIRPAD-KETTALGAAFADGLA 28 (81)
Q Consensus 2 Dilg~~v~~~~~-~e~~alGAA~lA~~~ 28 (81)
+.+|+++.+|.. .+.+|+|||++|.-.
T Consensus 228 ~~~g~~~~~p~~p~~~~A~GAAl~A~~~ 255 (276)
T 4ehu_A 228 REINTEIIVPDIPQLTGALGAALYAFDE 255 (276)
T ss_dssp HHHTSCEECCSSGGGHHHHHHHHHHHHH
T ss_pred HHHCCCeeeCCCcchHHHHHHHHHHHHH
Confidence 357889988885 456999999998643
No 22
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=81.33 E-value=0.76 Score=31.61 Aligned_cols=26 Identities=19% Similarity=0.222 Sum_probs=21.3
Q ss_pred CCceecCCCCchhHHHHHHHHHHhhc
Q 036432 5 GSPVIRPADKETTALGAAFADGLAIG 30 (81)
Q Consensus 5 g~~v~~~~~~e~~alGAA~lA~~~~G 30 (81)
+++|......+++.+|||++|+++..
T Consensus 438 ~~~v~l~~a~DGSg~GAAliAa~a~~ 463 (470)
T 3f9m_A 438 SCEITFIESEEGSGRGAALVSAVACK 463 (470)
T ss_dssp TEEEEEEECSSHHHHHHHHHHHHHTC
T ss_pred CCeEEEEEcCCCcHHHHHHHHHHHHH
Confidence 45677777889999999999998754
No 23
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=78.63 E-value=0.95 Score=31.22 Aligned_cols=26 Identities=23% Similarity=0.313 Sum_probs=21.5
Q ss_pred CCceecCCCCchhHHHHHHHHHHhhc
Q 036432 5 GSPVIRPADKETTALGAAFADGLAIG 30 (81)
Q Consensus 5 g~~v~~~~~~e~~alGAA~lA~~~~G 30 (81)
+.+|......+++.+|||++|+++..
T Consensus 447 ~~~v~l~~a~DGSg~GAAliAa~a~~ 472 (485)
T 3o8m_A 447 DHPIQLVAAEDGSGVGAAIIACLTQK 472 (485)
T ss_dssp GCSEEEEECCCTTTHHHHHHHHHHHH
T ss_pred CceEEEEEcCCChHHHHHHHHHHHHH
Confidence 46677777889999999999998753
No 24
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=77.37 E-value=1.1 Score=30.64 Aligned_cols=25 Identities=20% Similarity=0.198 Sum_probs=20.1
Q ss_pred CceecCCCCchhHHHHHHHHHHhhc
Q 036432 6 SPVIRPADKETTALGAAFADGLAIG 30 (81)
Q Consensus 6 ~~v~~~~~~e~~alGAA~lA~~~~G 30 (81)
.+|.....++++..|||++|+++..
T Consensus 415 ~~v~~~~s~DGSg~GAAl~AA~a~~ 439 (445)
T 3hm8_A 415 CVVTFLQSEDGSGKGAALVTAVACR 439 (445)
T ss_dssp EEEEEEECSSCHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCchHHHHHHHHHHHH
Confidence 4566666789999999999998753
No 25
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=71.44 E-value=1.8 Score=29.48 Aligned_cols=26 Identities=8% Similarity=0.105 Sum_probs=21.6
Q ss_pred CCceecCCCCchhHHHHHHHHHHhhc
Q 036432 5 GSPVIRPADKETTALGAAFADGLAIG 30 (81)
Q Consensus 5 g~~v~~~~~~e~~alGAA~lA~~~~G 30 (81)
+.+|......+++.+|||++|+++..
T Consensus 420 ~~~v~~~~~~dgsg~GAAl~aa~~~~ 445 (457)
T 2yhx_A 420 SKPIXITPAIDGXGAASXVIXSIASA 445 (457)
T ss_dssp GSSEEEEECCCTTTHHHHHHHHHHHH
T ss_pred CcceEEEECCCchhhhHHHHHHHHhh
Confidence 45777777889999999999998753
No 26
>3doe_B ADP-ribosylation factor-like protein 2-binding protein; binder of ARL2, small GTPase, effector, complex structure, GTP-binding, lipoprotein; HET: GTP; 2.25A {Homo sapiens} PDB: 3dof_B* 2k9a_A 2k0s_A
Probab=64.12 E-value=2.7 Score=25.04 Aligned_cols=28 Identities=11% Similarity=0.092 Sum_probs=24.0
Q ss_pred ceeecCCCHH-HHHHHHHHHHHHHHHHhc
Q 036432 48 TTFKPVLNEE-GRKKKAESWCRAVERTFN 75 (81)
Q Consensus 48 ~~~~P~~~~~-~y~~~y~~~~~~~~~~~~ 75 (81)
.+|.+..++. .|.++|..|++++++.+.
T Consensus 52 ~vFdd~EENKLeYT~I~~eY~~LVE~~Le 80 (165)
T 3doe_B 52 LEFEDTEENKLIYTPIFNEYISLVEKYIE 80 (165)
T ss_dssp GGCCSSSSBCTTHHHHHHHHHHHHHHHHH
T ss_pred ccCCCccccchHHHHHHHHHHHHHHHHHH
Confidence 4699888886 899999999999998763
No 27
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=59.17 E-value=6.1 Score=25.68 Aligned_cols=27 Identities=26% Similarity=0.433 Sum_probs=19.8
Q ss_pred cC-CCceecCC-CCchhHHHHHHHHHHhh
Q 036432 3 LL-GSPVIRPA-DKETTALGAAFADGLAI 29 (81)
Q Consensus 3 il-g~~v~~~~-~~e~~alGAA~lA~~~~ 29 (81)
.| |.+|..+. ..++.|+|||+.|++-.
T Consensus 374 ~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 402 (404)
T 3i33_A 374 FFNGKELNKSINPDEAVAYGAAVQAAILI 402 (404)
T ss_dssp HTTTCCCBCSSCTTTHHHHHHHHHHHHHC
T ss_pred HcCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 45 67776664 45679999999998643
No 28
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=58.89 E-value=6.9 Score=23.34 Aligned_cols=27 Identities=30% Similarity=0.265 Sum_probs=20.7
Q ss_pred CCceecCCCCchhHHHHHHHHHHhhcc
Q 036432 5 GSPVIRPADKETTALGAAFADGLAIGV 31 (81)
Q Consensus 5 g~~v~~~~~~e~~alGAA~lA~~~~G~ 31 (81)
|.||-+....++.+.|||++|..=++.
T Consensus 112 GvPVatV~I~~a~~~nAa~lAa~Il~~ 138 (169)
T 3trh_A 112 GVPVACTAIGKAGAKNAAILAAQIIAL 138 (169)
T ss_dssp TSCCEECCSTHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEecCCccchHHHHHHHHHHcC
Confidence 677777777788999999999754443
No 29
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=58.11 E-value=8.7 Score=24.72 Aligned_cols=25 Identities=28% Similarity=0.441 Sum_probs=18.6
Q ss_pred cC-CCceecC-CCCchhHHHHHHHHHH
Q 036432 3 LL-GSPVIRP-ADKETTALGAAFADGL 27 (81)
Q Consensus 3 il-g~~v~~~-~~~e~~alGAA~lA~~ 27 (81)
.| +.+|..+ ...++.|+|||+.|++
T Consensus 366 ~~~~~~v~~~~~p~~ava~Gaa~~a~~ 392 (394)
T 3qfu_A 366 YFDGKKASKGINPDEAVAYGAAVQAGV 392 (394)
T ss_dssp HTTTCCCBCCSCTTTHHHHHHHHHHHH
T ss_pred HcCCCCCCCCcCHHHHHHHHHHHHHHh
Confidence 45 6787665 4456799999999875
No 30
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=56.92 E-value=7.9 Score=23.21 Aligned_cols=26 Identities=27% Similarity=0.198 Sum_probs=20.3
Q ss_pred CCceecCCCCchhHHHHHHHHHHhhc
Q 036432 5 GSPVIRPADKETTALGAAFADGLAIG 30 (81)
Q Consensus 5 g~~v~~~~~~e~~alGAA~lA~~~~G 30 (81)
|.||-+....++.+.|||++|..=++
T Consensus 118 GvPVatV~I~~a~~~nAa~lAa~ILa 143 (174)
T 3kuu_A 118 GIPVGTLAIGKAGAANAALLAAQILA 143 (174)
T ss_dssp TSCCEECCSSHHHHHHHHHHHHHHHH
T ss_pred CCeeEEEEeCCccchHHHHHHHHHHc
Confidence 67777777778899999999875444
No 31
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=52.08 E-value=8.9 Score=26.81 Aligned_cols=31 Identities=29% Similarity=0.456 Sum_probs=22.6
Q ss_pred cCCCceecCC-CCchhHHHHHHHHHHhhccCC
Q 036432 3 LLGSPVIRPA-DKETTALGAAFADGLAIGVFK 33 (81)
Q Consensus 3 ilg~~v~~~~-~~e~~alGAA~lA~~~~G~~~ 33 (81)
.||.++.+.. ..++.|+|||+.|+.-.|..+
T Consensus 356 ~fg~~~~~~~nPdeaVA~GAai~a~~l~~~~~ 387 (605)
T 4b9q_A 356 FFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVK 387 (605)
T ss_dssp HHTSCCCSSSCTTTHHHHHHHHHHHHHHTSSC
T ss_pred HhccCcCCCcChhHHHHHhHHHHHHHhcCCCC
Confidence 5677776544 456899999999997666543
No 32
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=51.63 E-value=11 Score=22.37 Aligned_cols=26 Identities=23% Similarity=0.205 Sum_probs=19.4
Q ss_pred CCceecCCCCchhHHHHHHHHHHhhc
Q 036432 5 GSPVIRPADKETTALGAAFADGLAIG 30 (81)
Q Consensus 5 g~~v~~~~~~e~~alGAA~lA~~~~G 30 (81)
|.||-+....++.+.|||++|..=++
T Consensus 109 GvPVatV~I~~a~~~nAa~lAa~Il~ 134 (163)
T 3ors_A 109 GIPVATTAIGAAGAKNAGILAARMLS 134 (163)
T ss_dssp TSCCEECCSTHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCcccHHHHHHHHHHHh
Confidence 56777777777789999999875443
No 33
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=51.37 E-value=11 Score=22.44 Aligned_cols=26 Identities=23% Similarity=0.298 Sum_probs=19.0
Q ss_pred CCceecCCCCchhHHHHHHHHHHhhc
Q 036432 5 GSPVIRPADKETTALGAAFADGLAIG 30 (81)
Q Consensus 5 g~~v~~~~~~e~~alGAA~lA~~~~G 30 (81)
|.||-+....++.+.|||++|+.=++
T Consensus 117 GvpVatV~I~~a~~~nAallAaqIla 142 (170)
T 1xmp_A 117 GVPVATVAIGKAGSTNAGLLAAQILG 142 (170)
T ss_dssp TCCCEECCSSHHHHHHHHHHHHHHHH
T ss_pred CCeeEEEecCCcchHHHHHHHHHHHc
Confidence 56666666777799999999875443
No 34
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=51.13 E-value=14 Score=22.11 Aligned_cols=27 Identities=30% Similarity=0.149 Sum_probs=21.1
Q ss_pred CCceecCCCCchhHHHHHHHHHHhhcc
Q 036432 5 GSPVIRPADKETTALGAAFADGLAIGV 31 (81)
Q Consensus 5 g~~v~~~~~~e~~alGAA~lA~~~~G~ 31 (81)
|+||-+....+..+.+||++|..=++.
T Consensus 118 Gvpvatv~i~~~~a~NAallA~~ILa~ 144 (173)
T 4grd_A 118 GVPVATFAIGEAGAANAALFAVSILSG 144 (173)
T ss_dssp TSCCEECCSSHHHHHHHHHHHHHHHTT
T ss_pred CCCceEEecCCcchHHHHHHHHHHHcC
Confidence 677777777788999999999865554
No 35
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=49.57 E-value=6.3 Score=26.73 Aligned_cols=23 Identities=13% Similarity=0.081 Sum_probs=17.6
Q ss_pred CceecCCCCchhHHHHHHHHHHh
Q 036432 6 SPVIRPADKETTALGAAFADGLA 28 (81)
Q Consensus 6 ~~v~~~~~~e~~alGAA~lA~~~ 28 (81)
.+|......+++.+|||++|+.+
T Consensus 425 ~~i~~~l~~dgs~iGAAllA~~~ 447 (451)
T 1bdg_A 425 TRFCLRLSEDGSGKGAAAIAASC 447 (451)
T ss_dssp CEEEEEECTTHHHHHHHHHHTTC
T ss_pred CcEEEEECCCccHHHHHHHHHHH
Confidence 45555567789999999998764
No 36
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=48.57 E-value=7.7 Score=28.71 Aligned_cols=24 Identities=17% Similarity=0.206 Sum_probs=18.5
Q ss_pred ceecCCCCchhHHHHHHHHHHhhc
Q 036432 7 PVIRPADKETTALGAAFADGLAIG 30 (81)
Q Consensus 7 ~v~~~~~~e~~alGAA~lA~~~~G 30 (81)
+|......+++..|||++|+++..
T Consensus 887 ~v~~~~~~dgsg~GAAl~aa~~~~ 910 (917)
T 1cza_N 887 NVSFLLSEDGSGKGAALITAVGVR 910 (917)
T ss_dssp EEEEEECSSCSHHHHHHHHHHHHH
T ss_pred ceEEEEecCChHHHHHHHHHHHHH
Confidence 454455778999999999998743
No 37
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=48.06 E-value=12 Score=24.77 Aligned_cols=21 Identities=14% Similarity=0.021 Sum_probs=16.4
Q ss_pred CCceecCCCCc-hhHHHHHHHH
Q 036432 5 GSPVIRPADKE-TTALGAAFAD 25 (81)
Q Consensus 5 g~~v~~~~~~e-~~alGAA~lA 25 (81)
++++..++..+ .+|+|||+.+
T Consensus 337 ~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 337 QLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp SCCEEEETTTTCHHHHHHHHHH
T ss_pred CeeEEEcCCccHHHHHHHHHHh
Confidence 56777787766 5999999864
No 38
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=44.72 E-value=20 Score=21.27 Aligned_cols=26 Identities=27% Similarity=0.134 Sum_probs=18.5
Q ss_pred CCceecCCCCchhHHHHHHHHHHhhc
Q 036432 5 GSPVIRPADKETTALGAAFADGLAIG 30 (81)
Q Consensus 5 g~~v~~~~~~e~~alGAA~lA~~~~G 30 (81)
|.||-+....+.++.|||++|..=++
T Consensus 111 gvpVatV~I~~ag~~nAa~lAa~Il~ 136 (166)
T 3oow_A 111 GIPVATFAIGMAGAKNAALFAASILQ 136 (166)
T ss_dssp TSCCEECCSTHHHHHHHHHHHHHHHG
T ss_pred CCceEEEecCCccchHHHHHHHHHHc
Confidence 45666666677788999998875444
No 39
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=44.45 E-value=24 Score=21.26 Aligned_cols=27 Identities=22% Similarity=0.275 Sum_probs=20.7
Q ss_pred CCceecCCCCchhHHHHHHHHHHhhcc
Q 036432 5 GSPVIRPADKETTALGAAFADGLAIGV 31 (81)
Q Consensus 5 g~~v~~~~~~e~~alGAA~lA~~~~G~ 31 (81)
|+||.......+++..||++|..=++.
T Consensus 128 GvpVaTvaig~~ga~NAallA~qILa~ 154 (181)
T 4b4k_A 128 GVPVATVAIGKAGSTNAGLLAAQILGS 154 (181)
T ss_dssp TCCCEECCSSHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEecCCccHHHHHHHHHHHHcc
Confidence 678877777788889999988765443
No 40
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=42.35 E-value=13 Score=27.58 Aligned_cols=24 Identities=21% Similarity=0.181 Sum_probs=18.1
Q ss_pred eecCCCCchhHHHHHHHHHHhhcc
Q 036432 8 VIRPADKETTALGAAFADGLAIGV 31 (81)
Q Consensus 8 v~~~~~~e~~alGAA~lA~~~~G~ 31 (81)
+......+++.+|||++|+++...
T Consensus 440 ~~i~~a~dgs~~GAA~laa~~~~l 463 (917)
T 1cza_N 440 VRFLLSESGSGKGAAMVTAVAYRL 463 (917)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHH
T ss_pred eEEEEeccchHHHHHHHHHhHhhh
Confidence 333334789999999999998663
No 41
>4dzo_A Mitotic spindle assembly checkpoint protein MAD1; homodimer, kinetochore, mitosis, spindle checkpoint protein, nucleus, cell cycle; HET: MSE; 1.76A {Homo sapiens}
Probab=40.78 E-value=21 Score=19.99 Aligned_cols=22 Identities=14% Similarity=0.083 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHhchhhcc
Q 036432 58 GRKKKAESWCRAVERTFNLADIS 80 (81)
Q Consensus 58 ~y~~~y~~~~~~~~~~~~~~~~~ 80 (81)
.+.+.-..|++++..+++| ++|
T Consensus 26 vF~~ks~eFReav~~LlGy-kId 47 (123)
T 4dzo_A 26 VFQTKIQEFRKACYTLTGY-QID 47 (123)
T ss_dssp HHHHHHHHHHHHHHHHHSE-EEE
T ss_pred HHHHHHHHHHHHHHHHhCe-EEE
Confidence 3566677899999999999 554
No 42
>2jy0_A Protease NS2-3; membrane segment, HCV NS2 protein, membrane protein, viral protein; NMR {Synthetic}
Probab=40.37 E-value=3.5 Score=17.15 Aligned_cols=15 Identities=27% Similarity=0.344 Sum_probs=10.8
Q ss_pred CchhHHHHHHHHHHh
Q 036432 14 KETTALGAAFADGLA 28 (81)
Q Consensus 14 ~e~~alGAA~lA~~~ 28 (81)
++++++|++++.++.
T Consensus 4 e~aas~G~~vlv~lt 18 (27)
T 2jy0_A 4 EMAASAGGAVFVGLV 18 (27)
T ss_dssp HHHHTTSSHHHHHHH
T ss_pred HHHhhhhhHHHHHHH
Confidence 456778888887764
No 43
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=37.46 E-value=30 Score=20.81 Aligned_cols=26 Identities=27% Similarity=0.187 Sum_probs=18.5
Q ss_pred CCceecCCCCchhHHHHHHHHHHhhc
Q 036432 5 GSPVIRPADKETTALGAAFADGLAIG 30 (81)
Q Consensus 5 g~~v~~~~~~e~~alGAA~lA~~~~G 30 (81)
|.||-+....++.+.|||++|+.=++
T Consensus 127 GvpVatV~I~~a~~~nAallAaqIla 152 (182)
T 1u11_A 127 GVPVGTLAIGASGAKNAALLAASILA 152 (182)
T ss_dssp TSCCEECCSSHHHHHHHHHHHHHHHG
T ss_pred CCceEEEecCCccchHHHHHHHHHHc
Confidence 55666666667789999998875443
No 44
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=33.32 E-value=21 Score=23.17 Aligned_cols=18 Identities=33% Similarity=0.294 Sum_probs=13.6
Q ss_pred CCCCchhHHHHHHHHHHh
Q 036432 11 PADKETTALGAAFADGLA 28 (81)
Q Consensus 11 ~~~~e~~alGAA~lA~~~ 28 (81)
....++.|+|||+.|+.-
T Consensus 384 ~~p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 384 LNPSELQARGAALQASLI 401 (409)
T ss_dssp CCTTTHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhhhh
Confidence 345678999999988753
No 45
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=30.48 E-value=18 Score=23.29 Aligned_cols=24 Identities=29% Similarity=0.491 Sum_probs=17.0
Q ss_pred cCCCceecCC-CCchhHHHHHHHHH
Q 036432 3 LLGSPVIRPA-DKETTALGAAFADG 26 (81)
Q Consensus 3 ilg~~v~~~~-~~e~~alGAA~lA~ 26 (81)
.|+.++..+. ..++.|+|||+.|+
T Consensus 356 ~~~~~v~~~~~p~~ava~Gaa~~a~ 380 (383)
T 1dkg_D 356 FFGKEPRKDVNPDEAVAIGAAVQGG 380 (383)
T ss_dssp HHSSCCBCSSCTTTHHHHHHHHHTT
T ss_pred HhCCCCCCCcChHHHHHHHHHHHHH
Confidence 3566776554 45679999999875
No 46
>3clq_A Uncharacterized protein; APC29596.3, conserved protein of unknown function, enterococ faecalis V583, structural genomics, PSI-2; 2.50A {Enterococcus faecalis}
Probab=30.48 E-value=50 Score=22.49 Aligned_cols=40 Identities=18% Similarity=0.040 Sum_probs=28.0
Q ss_pred chhHHHHHHHHHHhhccCCCHHHHHhccccccCceeecCCC
Q 036432 15 ETTALGAAFADGLAIGVFKEEEIFASGEWAKTSTTFKPVLN 55 (81)
Q Consensus 15 e~~alGAA~lA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~ 55 (81)
.++-.||++.|.+--|+-++.+++ .++....+-+|.|..+
T Consensus 59 ~gPm~gA~igA~lfEGwA~d~eeA-~~l~~sG~I~~~Pch~ 98 (421)
T 3clq_A 59 CGPMKGAVQGALVFEGLAKDLADA-DRVARSGAITFSPCHE 98 (421)
T ss_dssp CHHHHHHHHHHHHHHTSCSSHHHH-HHHHTTTCSEEEEGGG
T ss_pred CHHHHHHHHHHHHHHhhcCCHHHH-HHHHHCCCeEEecccc
Confidence 357789999888888887888877 5555433446777543
No 47
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=27.59 E-value=26 Score=22.13 Aligned_cols=24 Identities=29% Similarity=0.264 Sum_probs=17.6
Q ss_pred cCCCceecCC-CCchhHHHHHHHHH
Q 036432 3 LLGSPVIRPA-DKETTALGAAFADG 26 (81)
Q Consensus 3 ilg~~v~~~~-~~e~~alGAA~lA~ 26 (81)
.|+.+|.++. ..++.++|+++++.
T Consensus 300 ~~~~~v~~~~~p~~ava~Gaa~~a~ 324 (344)
T 1jce_A 300 ETGISVIRSEEPLTAVAKGAGMVLD 324 (344)
T ss_dssp HHSSCEEECSSTTTHHHHHHHHGGG
T ss_pred HHCCCccccCChHHHHHHHHHHHHh
Confidence 4677887664 45679999998775
No 48
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=26.21 E-value=34 Score=24.39 Aligned_cols=28 Identities=29% Similarity=0.389 Sum_probs=20.5
Q ss_pred cCCCceecCC-CCchhHHHHHHHHHHhhc
Q 036432 3 LLGSPVIRPA-DKETTALGAAFADGLAIG 30 (81)
Q Consensus 3 ilg~~v~~~~-~~e~~alGAA~lA~~~~G 30 (81)
.||.++.... ..++.|+|||+.|+.-.|
T Consensus 357 ~fg~~~~~~~nPdeaVA~GAa~~a~~ls~ 385 (675)
T 3d2f_A 357 AFGKPLSTTLNQDEAIAKGAAFICAIHSP 385 (675)
T ss_dssp HHTSCEECCSCTTTHHHHHHHHHHHHTCS
T ss_pred hcCCCccccCCcchHHHHHHHHHHHHhCC
Confidence 4677775544 466899999999986544
No 49
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=25.54 E-value=57 Score=20.63 Aligned_cols=23 Identities=22% Similarity=0.004 Sum_probs=16.3
Q ss_pred CCceecCCCCchhHHHHHHHHHH
Q 036432 5 GSPVIRPADKETTALGAAFADGL 27 (81)
Q Consensus 5 g~~v~~~~~~e~~alGAA~lA~~ 27 (81)
..+|......+.+++|||.++.-
T Consensus 316 ~~~i~~s~~~~~~~~GAa~l~~~ 338 (343)
T 2yhw_A 316 DVDVVVSDLVDPALLGAASMVLD 338 (343)
T ss_dssp TCEEEECCCSCHHHHHHHHHHHH
T ss_pred CcEEEEccCCCchHHHHHHHHHH
Confidence 45666666566788999988753
No 50
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.50 E-value=56 Score=16.56 Aligned_cols=40 Identities=15% Similarity=0.102 Sum_probs=21.7
Q ss_pred CHHHHHhccccccCceeecCCCH-HHHHHHHHHHHHHHHHHh
Q 036432 34 EEEIFASGEWAKTSTTFKPVLNE-EGRKKKAESWCRAVERTF 74 (81)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~P~~~~-~~y~~~y~~~~~~~~~~~ 74 (81)
+.+++...... ..+.++|+... ....+.|..-.++|+.+.
T Consensus 20 s~~eIk~ayr~-l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~ 60 (88)
T 2ctr_A 20 SERQIKKAFHK-LAMKYHPDKNKSPDAEAKFREIAEAYETLS 60 (88)
T ss_dssp CHHHHHHHHHH-HHHHTCTTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHH-HHHHHCcCCCCChHHHHHHHHHHHHHHHHC
Confidence 45555233333 24568888643 234556666666666654
No 51
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=22.18 E-value=69 Score=19.11 Aligned_cols=25 Identities=24% Similarity=0.189 Sum_probs=15.1
Q ss_pred CCceecCCCCchhHHHHHHHHHHhhcc
Q 036432 5 GSPVIRPADKETTALGAAFADGLAIGV 31 (81)
Q Consensus 5 g~~v~~~~~~e~~alGAA~lA~~~~G~ 31 (81)
|.||-+.... .+.|||++|..=++.
T Consensus 113 GvpVatV~I~--~~~nAa~lAa~Il~~ 137 (174)
T 3lp6_A 113 GVPVATVSIG--GAGNAGLLAVRMLGA 137 (174)
T ss_dssp TCCCEECCTT--CHHHHHHHHHHHHHT
T ss_pred CCeeEEEEcC--cchHHHHHHHHHHhC
Confidence 3445444333 788999988754443
No 52
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=21.92 E-value=63 Score=21.89 Aligned_cols=28 Identities=32% Similarity=0.464 Sum_probs=19.4
Q ss_pred cCCCceecCC-CCchhHHHHHHHHHHhhc
Q 036432 3 LLGSPVIRPA-DKETTALGAAFADGLAIG 30 (81)
Q Consensus 3 ilg~~v~~~~-~~e~~alGAA~lA~~~~G 30 (81)
.||.++..+. ..++.|+|||+.|+.-.|
T Consensus 325 ~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~ 353 (509)
T 2v7y_A 325 ELGKEPHKGVNPDEVVAIGAAIQGGVIAG 353 (509)
T ss_dssp HHSSCCBCCSCTTTHHHHHHHHHHHHHHT
T ss_pred HhCCCcCcCCCchhhhHhhHHHHHHHhcC
Confidence 3566665444 456799999999986444
No 53
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=21.69 E-value=88 Score=19.71 Aligned_cols=23 Identities=17% Similarity=0.089 Sum_probs=16.2
Q ss_pred CCceecCCCCchhHHHHHHHHHH
Q 036432 5 GSPVIRPADKETTALGAAFADGL 27 (81)
Q Consensus 5 g~~v~~~~~~e~~alGAA~lA~~ 27 (81)
..||......+++.+|||.++..
T Consensus 304 ~~~i~~~~~~~a~l~GAa~l~~~ 326 (332)
T 1sz2_A 304 DIPVYLIVHDNPGLLGSGAHLRQ 326 (332)
T ss_dssp TCCEEEECCSCHHHHHHHHHHHH
T ss_pred CceEEEEECCchhHHHHHHHHHH
Confidence 34565555667899999988754
No 54
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=20.65 E-value=77 Score=19.07 Aligned_cols=25 Identities=28% Similarity=0.360 Sum_probs=15.4
Q ss_pred CCceecCCCCchhHHHHHHHHHHhhcc
Q 036432 5 GSPVIRPADKETTALGAAFADGLAIGV 31 (81)
Q Consensus 5 g~~v~~~~~~e~~alGAA~lA~~~~G~ 31 (81)
|.||-+.... .+.|||++|+.=++.
T Consensus 119 GvpVatV~Id--~~~nAa~lAaqIla~ 143 (183)
T 1o4v_A 119 GVPVATVAIN--NAKNAGILAASILGI 143 (183)
T ss_dssp TCCCEECCTT--CHHHHHHHHHHHHHT
T ss_pred CCeeEEEecC--CchHHHHHHHHHHhc
Confidence 4555444333 788999888754443
No 55
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=20.01 E-value=48 Score=24.20 Aligned_cols=22 Identities=27% Similarity=0.543 Sum_probs=16.3
Q ss_pred CCCCchhHHHHHHHHHHhhccC
Q 036432 11 PADKETTALGAAFADGLAIGVF 32 (81)
Q Consensus 11 ~~~~e~~alGAA~lA~~~~G~~ 32 (81)
|.++.+-|+|.|+.|+..+..+
T Consensus 743 P~nDgGiALGQA~iA~~~L~~~ 764 (772)
T 4g9i_A 743 PRGDNGVNVGQAFLGGLYLEGY 764 (772)
T ss_dssp CSSGGGHHHHHHHHHHHHHHTS
T ss_pred CCCcchHHHHHHHHHHHHHhcc
Confidence 3456678999999998876444
Done!