BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036435
(372 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 164/302 (54%), Gaps = 36/302 (11%)
Query: 72 LKRYNFSDVKKLTNSFKDK--LGQGGFGGVYKGRLLD-------------------DFVN 110
LKR++ +++ +++F +K LG+GGFG VYKGRL D F
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
EV IS H N++ L GFC+ R L+Y +M NGS+ + S+P L W K
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP--LDWPKRQ 142
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
I +G A+GL YLH C KI+H D+K NILLDE+F + DFGLAKL K+ V
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX- 201
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLD-SGVDSSSEVYFPH 289
RG IG+IAPE S G+ S K+DV+ +G+M++EL+ + D + + + +V
Sbjct: 202 -AVRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 258
Query: 290 WIYRHVEQDREFKLPGVVT-----RKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
W+ + +E KL +V ++E +++I V L C Q+ P +RP M+EV+ ML+
Sbjct: 259 WVKGLL---KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
Query: 345 GS 346
G
Sbjct: 316 GD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 164/302 (54%), Gaps = 36/302 (11%)
Query: 72 LKRYNFSDVKKLTNSFKDK--LGQGGFGGVYKGRLLD-------------------DFVN 110
LKR++ +++ +++F +K LG+GGFG VYKGRL D F
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
EV IS H N++ L GFC+ R L+Y +M NGS+ + S+P L W K
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP--LDWPKRQ 134
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
I +G A+GL YLH C KI+H D+K NILLDE+F + DFGLAKL K+ V
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX- 193
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLD-SGVDSSSEVYFPH 289
RG IG+IAPE S G+ S K+DV+ +G+M++EL+ + D + + + +V
Sbjct: 194 -AVRGXIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 250
Query: 290 WIYRHVEQDREFKLPGVVT-----RKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
W+ + +E KL +V ++E +++I V L C Q+ P +RP M+EV+ ML+
Sbjct: 251 WVKGLL---KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
Query: 345 GS 346
G
Sbjct: 308 GD 309
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 153/303 (50%), Gaps = 41/303 (13%)
Query: 69 PLPLKRYNFSDVKKLTNSFKDK--LGQGGFGGVYKGRLLDDFVNEVASISRT-------- 118
P R D+++ TN+F K +G G FG VYKG L D +VA RT
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG--AKVALKRRTPESSQGIE 80
Query: 119 ------------SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRW 166
H ++V+L+GFC E N LIY++M NG+L++ +Y D P + W
Sbjct: 81 EFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDL--PTMSMSW 138
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
E+ EI IG A+GL YLH + I+H D+K NILLDE+F PKI+DFG++K T+ G
Sbjct: 139 EQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK-KGTELGQ 194
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVY 286
+G +GYI PE F + G ++ KSDVYSFG+++ E++ ++ + + V
Sbjct: 195 THLXXVVKGTLGYIDPEYFIK--GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM-VN 251
Query: 287 FPHWIYRHVEQDREFKL-----PGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
W VE +L P + + E +K + C+ DRP M +V+
Sbjct: 252 LAEWA---VESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLW 308
Query: 342 MLQ 344
L+
Sbjct: 309 KLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 153/303 (50%), Gaps = 41/303 (13%)
Query: 69 PLPLKRYNFSDVKKLTNSFKDK--LGQGGFGGVYKGRLLDDFVNEVASISRT-------- 118
P R D+++ TN+F K +G G FG VYKG L D +VA RT
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG--AKVALKRRTPESSQGIE 80
Query: 119 ------------SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRW 166
H ++V+L+GFC E N LIY++M NG+L++ +Y D P + W
Sbjct: 81 EFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDL--PTMSMSW 138
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
E+ EI IG A+GL YLH + I+H D+K NILLDE+F PKI+DFG++K T +
Sbjct: 139 EQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT 195
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVY 286
+ +G +GYI PE F + G ++ KSDVYSFG+++ E++ ++ + + V
Sbjct: 196 HLXXV-VKGTLGYIDPEYFIK--GRLTEKSDVYSFGVVLFEVLCARSAIVQSL-PREMVN 251
Query: 287 FPHWIYRHVEQDREFKL-----PGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
W VE +L P + + E +K + C+ DRP M +V+
Sbjct: 252 LAEWA---VESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLW 308
Query: 342 MLQ 344
L+
Sbjct: 309 KLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 153/310 (49%), Gaps = 56/310 (18%)
Query: 75 YNFSDVKKLTNSFKD--------KLGQGGFGGVYKG---------------------RLL 105
++F ++K +TN+F + K+G+GGFG VYKG L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 106 DDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLR 165
F E+ +++ H N+V LLGF +G++ L+Y +MPNGSL + D + P L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP---LS 131
Query: 166 WEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEG 225
W +I G A G+ +LH +H DIK NILLDE F KISDFGLA+ E
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR---ASEK 185
Query: 226 IVSSLLGAR--GIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSS 283
+++ +R G Y+APE GE++ KSD+YSFG++++E++ +G+ +
Sbjct: 186 FAQTVMXSRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEII-------TGLPAVD 235
Query: 284 EVYFPHWIYRHVEQDREFKLPGV--VTRKENEI----AKKMIIVGLWCIQARPSDRPPMN 337
E P + E+ + + + +K N+ + M V C+ + + RP +
Sbjct: 236 EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIK 295
Query: 338 EVIEMLQGST 347
+V ++LQ T
Sbjct: 296 KVQQLLQEMT 305
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 152/310 (49%), Gaps = 56/310 (18%)
Query: 75 YNFSDVKKLTNSFKD--------KLGQGGFGGVYKG---------------------RLL 105
++F ++K +TN+F + K+G+GGFG VYKG L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 106 DDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLR 165
F E+ +++ H N+V LLGF +G++ L+Y +MPNGSL + D + P L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP---LS 131
Query: 166 WEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEG 225
W +I G A G+ +LH +H DIK NILLDE F KISDFGLA+ E
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR---ASEK 185
Query: 226 IVSSLLGAR--GIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSS 283
+++ R G Y+APE GE++ KSD+YSFG++++E++ +G+ +
Sbjct: 186 FAQTVMXXRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEII-------TGLPAVD 235
Query: 284 EVYFPHWIYRHVEQDREFKLPGV--VTRKENEI----AKKMIIVGLWCIQARPSDRPPMN 337
E P + E+ + + + +K N+ + M V C+ + + RP +
Sbjct: 236 EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIK 295
Query: 338 EVIEMLQGST 347
+V ++LQ T
Sbjct: 296 KVQQLLQEMT 305
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 152/312 (48%), Gaps = 56/312 (17%)
Query: 75 YNFSDVKKLTNSFKD--------KLGQGGFGGVYKG---------------------RLL 105
++F ++K +TN+F + K+G+GGFG VYKG L
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 106 DDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLR 165
F E+ +++ H N+V LLGF +G++ L+Y +MPNGSL + D + P L
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP---LS 125
Query: 166 WEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEG 225
W +I G A G+ +LH +H DIK NILLDE F KISDFGLA+ E
Sbjct: 126 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR---ASEK 179
Query: 226 IVSSLLGAR--GIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSS 283
++ R G Y+APE GE++ KSD+YSFG++++E++ +G+ +
Sbjct: 180 FAQXVMXXRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEII-------TGLPAVD 229
Query: 284 EVYFPHWIYRHVEQDREFKLPGV--VTRKENEI----AKKMIIVGLWCIQARPSDRPPMN 337
E P + E+ + + + +K N+ + M V C+ + + RP +
Sbjct: 230 EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIK 289
Query: 338 EVIEMLQGSTEA 349
+V ++LQ T +
Sbjct: 290 KVQQLLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 146/310 (47%), Gaps = 56/310 (18%)
Query: 75 YNFSDVKKLTNSFKD--------KLGQGGFGGVYKG---------------------RLL 105
++F ++K +TN+F + K G+GGFG VYKG L
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 106 DDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLR 165
F E+ ++ H N+V LLGF +G++ L+Y + PNGSL + D + P L
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP---LS 122
Query: 166 WEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEG 225
W +I G A G+ +LH +H DIK NILLDE F KISDFGLA+ E
Sbjct: 123 WHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR---ASEK 176
Query: 226 IVSSLLGAR--GIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSS 283
+ +R G Y APE GE++ KSD+YSFG++++E++ +G+ +
Sbjct: 177 FAQXVXXSRIVGTTAYXAPEALR---GEITPKSDIYSFGVVLLEII-------TGLPAVD 226
Query: 284 EVYFPHWIYRHVEQDREFKLPGV--VTRKENEIAKKMI----IVGLWCIQARPSDRPPMN 337
E P + E+ + + + +K N+ + V C+ + + RP +
Sbjct: 227 EHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIK 286
Query: 338 EVIEMLQGST 347
+V ++LQ T
Sbjct: 287 KVQQLLQEXT 296
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 133/295 (45%), Gaps = 45/295 (15%)
Query: 68 GPLPLKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFV 109
GP P Y+ ++++ + K KLG G +G VY+G +++F+
Sbjct: 1 GPSP--NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 58
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 169
E A + H N+V LLG C +I EFM G+L ++ + + + +
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV----L 114
Query: 170 YEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSS 229
+ I+ +EYL +H D+ N L+ E+ K++DFGL++L T ++
Sbjct: 115 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TXTA 169
Query: 230 LLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPH 289
GA+ I + APE + N + S KSDV++FG+++ E+ + G+D S
Sbjct: 170 HAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------ 221
Query: 290 WIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+Y +E+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 222 -VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 268
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 43/292 (14%)
Query: 71 PLKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEV 112
P Y+ ++++ + K KLG G +G VY+G +++F+ E
Sbjct: 5 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 64
Query: 113 ASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEI 172
A + H N+V LLG C +I EFM G+L ++ + + + + +
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYM 120
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLG 232
I+ +EYL +H D+ N L+ E+ K++DFGL++L T ++ G
Sbjct: 121 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAG 175
Query: 233 ARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIY 292
A+ I + APE + N + S KSDV++FG+++ E+ + G+D S +Y
Sbjct: 176 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VY 226
Query: 293 RHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+E+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 227 ELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 271
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 126/279 (45%), Gaps = 43/279 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASISRTSH 120
++++ + K KLG G FG VY+G +++F+ E A + H
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 121 VNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGL 180
N+V LLG C +I EFM G+L ++ + + + + + I+ +
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYMATQISSAM 122
Query: 181 EYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYI 240
EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+ I +
Sbjct: 123 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TXTAHAGAKFPIKWT 177
Query: 241 APEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDRE 300
APE + N + S KSDV++FG+++ E+ + G+D P +Y +E+D
Sbjct: 178 APESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGID-------PSQVYELLEKDYR 228
Query: 301 FKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
+ P K E+ + C Q PSDRP E+
Sbjct: 229 MERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 260
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 75 YNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASIS 116
Y+ ++++ + K KLG G +G VY+G +++F+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
H N+V LLG C +I EFM G+L ++ + + + + + I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYMATQI 120
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+ +EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFP 175
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
I + APE + N + S KSDV++FG+++ E+ + G+D S +Y +E
Sbjct: 176 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLE 226
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 227 KDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 75 YNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASIS 116
Y+ ++++ + K KLG G +G VY+G +++F+ E A +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
H N+V LLG C +I EFM G+L ++ + + + + + I
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYMATQI 125
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+ +EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFP 180
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
I + APE + N + S KSDV++FG+++ E+ + G+D S +Y +E
Sbjct: 181 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLE 231
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 232 KDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 75 YNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASIS 116
Y+ ++++ + K KLG G +G VY+G +++F+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
H N+V LLG C +I EFM G+L ++ + + + + + I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV----LLYMATQI 120
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+ +EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFP 175
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
I + APE + N + S KSDV++FG+++ E+ + G+D S +Y +E
Sbjct: 176 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLE 226
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 227 KDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 75 YNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASIS 116
Y+ ++++ + K KLG G +G VY+G +++F+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
H N+V LLG C +I EFM G+L ++ + + + + + I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV----LLYMATQI 120
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+ +EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFP 175
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
I + APE + N + S KSDV++FG+++ E+ + G+D S +Y +E
Sbjct: 176 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLE 226
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 227 KDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 75 YNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASIS 116
Y+ ++++ + K KLG G +G VY+G +++F+ E A +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
H N+V LLG C +I EFM G+L ++ + + + + + I
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 125
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+ +EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP 180
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
I + APE + N + S KSDV++FG+++ E+ + G+D S +Y +E
Sbjct: 181 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLE 231
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 232 KDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 75 YNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASIS 116
Y+ ++++ + K KLG G +G VY+G +++F+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
H N+V LLG C +I EFM G+L ++ + + + + + I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYMATQI 120
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+ +EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFP 175
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
I + APE + N + S KSDV++FG+++ E+ + G+D S +Y +E
Sbjct: 176 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLE 226
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 227 KDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 75 YNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASIS 116
Y+ ++++ + K KLG G +G VY+G +++F+ E A +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
H N+V LLG C +I EFM G+L ++ + + + + + I
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 125
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+ +EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TXTAHAGAKFP 180
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
I + APE + N + S KSDV++FG+++ E+ + G+D S +Y +E
Sbjct: 181 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLE 231
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 232 KDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 75 YNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASIS 116
Y+ ++++ + K KLG G +G VY+G +++F+ E A +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
H N+V LLG C +I EFM G+L ++ + + + + + I
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 125
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+ +EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP 180
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
I + APE + N + S KSDV++FG+++ E+ + G+D S +Y +E
Sbjct: 181 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLE 231
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 232 KDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 43/284 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASISRTSH 120
++++ + K KLG G +G VY+G +++F+ E A + H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 121 VNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGL 180
N+V LLG C +I EFM G+L ++ + + + + + I+ +
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV----LLYMATQISSAM 122
Query: 181 EYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYI 240
EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+ I +
Sbjct: 123 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TXTAHAGAKFPIKWT 177
Query: 241 APEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDRE 300
APE + N + S KSDV++FG+++ E+ + G+D P +Y +E+D
Sbjct: 178 APESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGID-------PSQVYELLEKDYR 228
Query: 301 FKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+ P K E+ + C Q PSDRP E+ + +
Sbjct: 229 MERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 265
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 75 YNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASIS 116
Y+ ++++ + K KLG G +G VY+G +++F+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
H N+V LLG C +I EFM G+L ++ + + + + + I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 120
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+ +EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP 175
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
I + APE + N + S KSDV++FG+++ E+ + G+D S +Y +E
Sbjct: 176 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLE 226
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 227 KDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 75 YNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASIS 116
Y+ ++++ + K KLG G +G VY+G +++F+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
H N+V LLG C +I EFM G+L ++ + + + + + I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 120
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+ +EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP 175
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
I + APE + N + S KSDV++FG+++ E+ + G+D S +Y +E
Sbjct: 176 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLE 226
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 227 KDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 43/279 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASISRTSH 120
++++ + K KLG G +G VY+G +++F+ E A + H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 121 VNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGL 180
N+V LLG C +I EFM G+L ++ + + + + + I+ +
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYMATQISSAM 122
Query: 181 EYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYI 240
EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+ I +
Sbjct: 123 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TFTAHAGAKFPIKWT 177
Query: 241 APEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDRE 300
APE + N + S KSDV++FG+++ E+ + G+D P +Y +E+D
Sbjct: 178 APESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGID-------PSQVYELLEKDYR 228
Query: 301 FKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
+ P K E+ + C Q PSDRP E+
Sbjct: 229 MERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 260
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 43/283 (15%)
Query: 75 YNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASIS 116
Y+ ++++ + K KLG G +G VY+G +++F+ E A +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 65
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
H N+V LLG C +I EFM G+L ++ + + + + + I
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 121
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+ +EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+
Sbjct: 122 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAPAGAKFP 176
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
I + APE + N + S KSDV++FG+++ E+ + G+D S +Y +E
Sbjct: 177 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLE 227
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
+D + P K E+ + C Q PSDRP E+
Sbjct: 228 KDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEI 263
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 75 YNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASIS 116
Y+ ++++ + K KLG G +G VY+G +++F+ E A +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
H N+V LLG C +I EFM G+L ++ + + + + + I
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 122
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+ +EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+
Sbjct: 123 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFP 177
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
I + APE + N + S KSDV++FG+++ E+ + G+D S +Y +E
Sbjct: 178 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLE 228
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 229 KDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 269
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 75 YNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASIS 116
Y+ ++++ + K KLG G +G VY+G +++F+ E A +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
H N+V LLG C +I EFM G+L ++ + + + + + I
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 122
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+ +EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+
Sbjct: 123 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP 177
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
I + APE + N + S KSDV++FG+++ E+ + G+D S +Y +E
Sbjct: 178 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLE 228
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 229 KDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 75 YNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASIS 116
Y+ ++++ + K KLG G +G VY+G +++F+ E A +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
H N+V LLG C +I EFM G+L ++ + + + + + I
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 125
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+ +EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFP 180
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
I + APE + N + S KSDV++FG+++ E+ + G+D S +Y +E
Sbjct: 181 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLE 231
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 232 KDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 75 YNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASIS 116
Y+ ++++ + K KLG G +G VY+G +++F+ E A +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
H N+V LLG C +I EFM G+L ++ + + + + + I
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 122
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+ +EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+
Sbjct: 123 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAPAGAKFP 177
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
I + APE + N + S KSDV++FG+++ E+ + G+D S +Y +E
Sbjct: 178 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLE 228
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 229 KDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 269
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 75 YNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASIS 116
Y+ ++++ + K KLG G +G VY+G +++F+ E A +
Sbjct: 18 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 77
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
H N+V LLG C +I EFM G+L ++ + + + + + I
Sbjct: 78 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 133
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+ +EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+
Sbjct: 134 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP 188
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
I + APE + N + S KSDV++FG+++ E+ + G+D S +Y +E
Sbjct: 189 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLE 239
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 240 KDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 280
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 45/296 (15%)
Query: 67 YGPLPLKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDF 108
YG P Y+ ++++ + K KLG G +G VY+G +++F
Sbjct: 206 YGVSP--NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 263
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEK 168
+ E A + H N+V LLG C +I EFM G+L ++ + + +
Sbjct: 264 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---- 319
Query: 169 MYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVS 228
+ + I+ +EYL +H ++ N L+ E+ K++DFGL++L T +
Sbjct: 320 LLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD--TYT 374
Query: 229 SLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFP 288
+ GA+ I + APE + N + S KSDV++FG+++ E+ + G+D S
Sbjct: 375 AHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----- 427
Query: 289 HWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+Y +E+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 428 --VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 474
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 28/203 (13%)
Query: 86 SFKDKLGQGGFGGVYKGRL-------------------LDDFVNEVASISRTSHVNVVTL 126
+ K+K+G G FG V++ +++F+ EVA + R H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
+G + N +++ E++ GSL + ++ + L + + +AKG+ YLH+
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR---EQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
+ I+H ++K N+L+D+ + K+ DFGL++L K S A G ++APEV
Sbjct: 157 -NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL---KASTFLSSKSAAGTPEWMAPEVLR 212
Query: 247 RNFGEVSHKSDVYSFGMMIMELV 269
+ KSDVYSFG+++ EL
Sbjct: 213 DE--PSNEKSDVYSFGVILWELA 233
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 28/207 (13%)
Query: 86 SFKDKLGQGGFGGVYKGRL-------------------LDDFVNEVASISRTSHVNVVTL 126
+ K+K+G G FG V++ +++F+ EVA + R H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
+G + N +++ E++ GSL + ++ + L + + +AKG+ YLH+
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR---EQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
+ I+H D+K N+L+D+ + K+ DFGL++L K A G ++APEV
Sbjct: 157 -NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL---KASXFLXSKXAAGTPEWMAPEVLR 212
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKN 273
+ KSDVYSFG+++ EL +
Sbjct: 213 DE--PSNEKSDVYSFGVILWELATLQQ 237
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 43/281 (15%)
Query: 86 SFKDKLGQGGFGGVYKGRLL-----------------DDFVNEVASISRTSHVNVVTLLG 128
+F ++G G FG V+ G L DDF+ E + + SH +V L G
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCS 188
CLE L++EFM +G L ++ E + + + + +G+ YL C
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEAC- 143
Query: 189 TKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRN 248
++H D+ N L+ E+ K+SDFG+ + + +S G + + + +PEVFS
Sbjct: 144 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFS-- 197
Query: 249 FGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVT 308
F S KSDV+SFG+++ E V + + S+SEV + P + +
Sbjct: 198 FSRYSSKSDVWSFGVLMWE-VFSEGKIPYENRSNSEV------VEDISTGFRLYKPRLAS 250
Query: 309 RKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGSTEA 349
+I C + RP DRP + ++ L E+
Sbjct: 251 THVYQIMNH-------CWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 134/298 (44%), Gaps = 49/298 (16%)
Query: 67 YGPLPLKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDF 108
YG P Y+ ++++ + K KLG G +G VY+G +++F
Sbjct: 245 YGVSP--NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 302
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPC--QYLRW 166
+ E A + H N+V LLG C +I EFM G+L ++ + C Q +
Sbjct: 303 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL------RECNRQEVNA 356
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + I+ +EYL +H ++ N L+ E+ K++DFGL++L T
Sbjct: 357 VVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD--T 411
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVY 286
++ GA+ I + APE + N + S KSDV++FG+++ E+ + G+D S
Sbjct: 412 YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--- 466
Query: 287 FPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+Y +E+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 467 ----VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 513
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 134/298 (44%), Gaps = 49/298 (16%)
Query: 67 YGPLPLKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDF 108
YG P Y+ ++++ + K KLG G +G VY+G +++F
Sbjct: 203 YGVSP--NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 260
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPC--QYLRW 166
+ E A + H N+V LLG C +I EFM G+L ++ + C Q +
Sbjct: 261 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL------RECNRQEVNA 314
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + I+ +EYL +H ++ N L+ E+ K++DFGL++L T
Sbjct: 315 VVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD--T 369
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVY 286
++ GA+ I + APE + N + S KSDV++FG+++ E+ + G+D S
Sbjct: 370 YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--- 424
Query: 287 FPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+Y +E+D + P K E+ + C Q PSDRP E+ + +
Sbjct: 425 ----VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 471
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 29/199 (14%)
Query: 90 KLGQGGFGGVYKGRLLDD------------------FVNEVASISRTSHVNVVTLLGFCL 131
++G G FG VYKG+ D F NEVA + +T HVN++ +G+ +
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY-M 101
Query: 132 EGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
+N A++ ++ SL K ++ +T + ++ +I A+G++YLH + I
Sbjct: 102 TKDNLAIVTQWCEGSSLYKHLHVQETK-----FQMFQLIDIARQTAQGMDYLH---AKNI 153
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS-RNFG 250
+H D+K +NI L E KI DFGLA + + G + G + ++APEV ++
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG-SQQVEQPTGSVLWMAPEVIRMQDNN 212
Query: 251 EVSHKSDVYSFGMMIMELV 269
S +SDVYS+G+++ EL+
Sbjct: 213 PFSFQSDVYSYGIVLYELM 231
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 43/281 (15%)
Query: 86 SFKDKLGQGGFGGVYKGRLL-----------------DDFVNEVASISRTSHVNVVTLLG 128
+F ++G G FG V+ G L +DF+ E + + SH +V L G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCS 188
CLE L++EFM +G L ++ E + + + + +G+ YL C
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEAC- 123
Query: 189 TKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRN 248
++H D+ N L+ E+ K+SDFG+ + + +S G + + + +PEVFS
Sbjct: 124 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFS-- 177
Query: 249 FGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVT 308
F S KSDV+SFG+++ E+ + + S+SEV + P + +
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFS-EGKIPYENRSNSEV------VEDISTGFRLYKPRLAS 230
Query: 309 RKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGSTEA 349
+I C + RP DRP + ++ L E+
Sbjct: 231 THVYQIMNH-------CWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 43/281 (15%)
Query: 86 SFKDKLGQGGFGGVYKGRLL-----------------DDFVNEVASISRTSHVNVVTLLG 128
+F ++G G FG V+ G L +DF+ E + + SH +V L G
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCS 188
CLE L++EFM +G L ++ E + + + + +G+ YL C
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEAC- 121
Query: 189 TKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRN 248
++H D+ N L+ E+ K+SDFG+ + + +S G + + + +PEVFS
Sbjct: 122 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFS-- 175
Query: 249 FGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVT 308
F S KSDV+SFG+++ E+ + + S+SEV + P + +
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFS-EGKIPYENRSNSEV------VEDISTGFRLYKPRLAS 228
Query: 309 RKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGSTEA 349
+I C + RP DRP + ++ L E+
Sbjct: 229 THVYQIMNH-------CWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 35/212 (16%)
Query: 83 LTNSFKDKLGQGGFGGVYKGRLLDD-----------------------FVNEVASISRTS 119
L F + +G+G FG VY G LLD+ F+ E + S
Sbjct: 29 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 88
Query: 120 HVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H NV++LLG CL L+ +M +G L F+ N +T P + + + +AK
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAK 143
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI-VSSLLGARGII 237
G++YL S K +H D+ N +LDE F K++DFGLA+ KE V + GA+ +
Sbjct: 144 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPV 200
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
++A E S + + KSDV+SFG+++ EL+
Sbjct: 201 KWMALE--SLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 43/281 (15%)
Query: 86 SFKDKLGQGGFGGVYKGRLL-----------------DDFVNEVASISRTSHVNVVTLLG 128
+F ++G G FG V+ G L +DF+ E + + SH +V L G
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCS 188
CLE L++EFM +G L ++ E + + + + +G+ YL C
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEAC- 126
Query: 189 TKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRN 248
++H D+ N L+ E+ K+SDFG+ + + +S G + + + +PEVFS
Sbjct: 127 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFS-- 180
Query: 249 FGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVT 308
F S KSDV+SFG+++ E+ + + S+SEV + P + +
Sbjct: 181 FSRYSSKSDVWSFGVLMWEVFS-EGKIPYENRSNSEV------VEDISTGFRLYKPRLAS 233
Query: 309 RKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGSTEA 349
+I C + RP DRP + ++ L E+
Sbjct: 234 THVYQIMNH-------CWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 29/199 (14%)
Query: 90 KLGQGGFGGVYKGRL------------------LDDFVNEVASISRTSHVNVVTLLGFCL 131
++G G FG VYKG+ L F NEV + +T HVN++ +G+
Sbjct: 19 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 78
Query: 132 EGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
+ A++ ++ SL ++ +T +K+ +I A+G++YLH + I
Sbjct: 79 KPQ-LAIVTQWCEGSSLYHHLHASETK-----FEMKKLIDIARQTARGMDYLH---AKSI 129
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS-RNFG 250
+H D+K +NI L ED KI DFGLA + + G G I ++APEV ++
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 251 EVSHKSDVYSFGMMIMELV 269
S +SDVY+FG+++ EL+
Sbjct: 189 PYSFQSDVYAFGIVLYELM 207
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 35/212 (16%)
Query: 83 LTNSFKDKLGQGGFGGVYKGRLLDD-----------------------FVNEVASISRTS 119
L F + +G+G FG VY G LLD+ F+ E + S
Sbjct: 30 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 120 HVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H NV++LLG CL L+ +M +G L F+ N +T P + + + +AK
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAK 144
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI-VSSLLGARGII 237
G++YL S K +H D+ N +LDE F K++DFGLA+ KE V + GA+ +
Sbjct: 145 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
++A E S + + KSDV+SFG+++ EL+
Sbjct: 202 KWMALE--SLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 35/212 (16%)
Query: 83 LTNSFKDKLGQGGFGGVYKGRLLDD-----------------------FVNEVASISRTS 119
L F + +G+G FG VY G LLD+ F+ E + S
Sbjct: 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 84
Query: 120 HVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H NV++LLG CL L+ +M +G L F+ N +T P + + + +AK
Sbjct: 85 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAK 139
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI-VSSLLGARGII 237
G++YL S K +H D+ N +LDE F K++DFGLA+ KE V + GA+ +
Sbjct: 140 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 196
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
++A E S + + KSDV+SFG+++ EL+
Sbjct: 197 KWMALE--SLQTQKFTTKSDVWSFGVLLWELM 226
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 35/212 (16%)
Query: 83 LTNSFKDKLGQGGFGGVYKGRLLDD-----------------------FVNEVASISRTS 119
L F + +G+G FG VY G LLD+ F+ E + S
Sbjct: 29 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 88
Query: 120 HVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H NV++LLG CL L+ +M +G L F+ N +T P + + + +AK
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAK 143
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI-VSSLLGARGII 237
G++YL S K +H D+ N +LDE F K++DFGLA+ KE V + GA+ +
Sbjct: 144 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 200
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
++A E S + + KSDV+SFG+++ EL+
Sbjct: 201 KWMALE--SLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 35/212 (16%)
Query: 83 LTNSFKDKLGQGGFGGVYKGRLLDD-----------------------FVNEVASISRTS 119
L F + +G+G FG VY G LLD+ F+ E + S
Sbjct: 27 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 86
Query: 120 HVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H NV++LLG CL L+ +M +G L F+ N +T P + + + +AK
Sbjct: 87 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAK 141
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI-VSSLLGARGII 237
G++YL S K +H D+ N +LDE F K++DFGLA+ KE V + GA+ +
Sbjct: 142 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 198
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
++A E S + + KSDV+SFG+++ EL+
Sbjct: 199 KWMALE--SLQTQKFTTKSDVWSFGVLLWELM 228
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 35/212 (16%)
Query: 83 LTNSFKDKLGQGGFGGVYKGRLLDD-----------------------FVNEVASISRTS 119
L F + +G+G FG VY G LLD+ F+ E + S
Sbjct: 30 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 120 HVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H NV++LLG CL L+ +M +G L F+ N +T P + + + +AK
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAK 144
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI-VSSLLGARGII 237
G++YL S K +H D+ N +LDE F K++DFGLA+ KE V + GA+ +
Sbjct: 145 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
++A E S + + KSDV+SFG+++ EL+
Sbjct: 202 KWMALE--SLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 35/208 (16%)
Query: 87 FKDKLGQGGFGGVYKGRLLDD-----------------------FVNEVASISRTSHVNV 123
F + +G+G FG VY G LLD+ F+ E + SH NV
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 124 VTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 182
++LLG CL L+ +M +G L F+ N +T P + + + +AKG++Y
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAKGMKY 166
Query: 183 LHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI-VSSLLGARGIIGYIA 241
L S K +H D+ N +LDE F K++DFGLA+ KE V + GA+ + ++A
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELV 269
E S + + KSDV+SFG+++ EL+
Sbjct: 224 LE--SLQTQKFTTKSDVWSFGVLLWELM 249
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 35/212 (16%)
Query: 83 LTNSFKDKLGQGGFGGVYKGRLLDD-----------------------FVNEVASISRTS 119
L F + +G+G FG VY G LLD+ F+ E + S
Sbjct: 49 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 108
Query: 120 HVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H NV++LLG CL L+ +M +G L F+ N +T P + + + +AK
Sbjct: 109 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAK 163
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI-VSSLLGARGII 237
G++YL S K +H D+ N +LDE F K++DFGLA+ KE V + GA+ +
Sbjct: 164 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 220
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
++A E S + + KSDV+SFG+++ EL+
Sbjct: 221 KWMALE--SLQTQKFTTKSDVWSFGVLLWELM 250
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 35/212 (16%)
Query: 83 LTNSFKDKLGQGGFGGVYKGRLLDD-----------------------FVNEVASISRTS 119
L F + +G+G FG VY G LLD+ F+ E + S
Sbjct: 22 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 81
Query: 120 HVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H NV++LLG CL L+ +M +G L F+ N +T P + + + +AK
Sbjct: 82 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAK 136
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI-VSSLLGARGII 237
G++YL S K +H D+ N +LDE F K++DFGLA+ KE V + GA+ +
Sbjct: 137 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 193
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
++A E S + + KSDV+SFG+++ EL+
Sbjct: 194 KWMALE--SLQTQKFTTKSDVWSFGVLLWELM 223
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 35/212 (16%)
Query: 83 LTNSFKDKLGQGGFGGVYKGRLLDD-----------------------FVNEVASISRTS 119
L F + +G+G FG VY G LLD+ F+ E + S
Sbjct: 28 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 87
Query: 120 HVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H NV++LLG CL L+ +M +G L F+ N +T P + + + +AK
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAK 142
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI-VSSLLGARGII 237
G++YL S K +H D+ N +LDE F K++DFGLA+ KE V + GA+ +
Sbjct: 143 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 199
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
++A E S + + KSDV+SFG+++ EL+
Sbjct: 200 KWMALE--SLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 121/281 (43%), Gaps = 43/281 (15%)
Query: 86 SFKDKLGQGGFGGVYKGRLL-----------------DDFVNEVASISRTSHVNVVTLLG 128
+F ++G G FG V+ G L +DF+ E + + SH +V L G
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCS 188
CLE L+ EFM +G L ++ E + + + + +G+ YL C
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEAC- 124
Query: 189 TKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRN 248
++H D+ N L+ E+ K+SDFG+ + + +S G + + + +PEVFS
Sbjct: 125 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFS-- 178
Query: 249 FGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVT 308
F S KSDV+SFG+++ E+ + + S+SEV + P + +
Sbjct: 179 FSRYSSKSDVWSFGVLMWEVFS-EGKIPYENRSNSEV------VEDISTGFRLYKPRLAS 231
Query: 309 RKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGSTEA 349
+I C + RP DRP + ++ L E+
Sbjct: 232 THVYQIMNH-------CWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 29/199 (14%)
Query: 90 KLGQGGFGGVYKGRL------------------LDDFVNEVASISRTSHVNVVTLLGFCL 131
++G G FG VYKG+ L F NEV + +T HVN++ +G+
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 132 EGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
A++ ++ SL ++ +T +K+ +I A+G++YLH + I
Sbjct: 91 -APQLAIVTQWCEGSSLYHHLHASETK-----FEMKKLIDIARQTARGMDYLH---AKSI 141
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS-RNFG 250
+H D+K +NI L ED KI DFGLA + G G I ++APEV ++
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 251 EVSHKSDVYSFGMMIMELV 269
S +SDVY+FG+++ EL+
Sbjct: 201 PYSFQSDVYAFGIVLYELM 219
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 29/199 (14%)
Query: 90 KLGQGGFGGVYKGRL------------------LDDFVNEVASISRTSHVNVVTLLGFCL 131
++G G FG VYKG+ L F NEV + +T HVN++ +G+
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 132 EGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
+ A++ ++ SL ++ +T +K+ +I A+G++YLH + I
Sbjct: 91 K-PQLAIVTQWCEGSSLYHHLHASETK-----FEMKKLIDIARQTARGMDYLH---AKSI 141
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS-RNFG 250
+H D+K +NI L ED KI DFGLA + G G I ++APEV ++
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 251 EVSHKSDVYSFGMMIMELV 269
S +SDVY+FG+++ EL+
Sbjct: 201 PYSFQSDVYAFGIVLYELM 219
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 105/212 (49%), Gaps = 35/212 (16%)
Query: 83 LTNSFKDKLGQGGFGGVYKGRLLDD-----------------------FVNEVASISRTS 119
L F + +G+G FG VY G LLD+ F+ E + S
Sbjct: 28 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 87
Query: 120 HVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H NV++LLG CL L+ +M +G L F+ N +T P + + + +AK
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAK 142
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKE-GIVSSLLGARGII 237
G+++L S K +H D+ N +LDE F K++DFGLA+ KE V + GA+ +
Sbjct: 143 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 199
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
++A E S + + KSDV+SFG+++ EL+
Sbjct: 200 KWMALE--SLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 105/212 (49%), Gaps = 35/212 (16%)
Query: 83 LTNSFKDKLGQGGFGGVYKGRLLDD-----------------------FVNEVASISRTS 119
L F + +G+G FG VY G LLD+ F+ E + S
Sbjct: 30 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 120 HVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H NV++LLG CL L+ +M +G L F+ N +T P + + + +AK
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAK 144
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKE-GIVSSLLGARGII 237
G+++L S K +H D+ N +LDE F K++DFGLA+ KE V + GA+ +
Sbjct: 145 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
++A E S + + KSDV+SFG+++ EL+
Sbjct: 202 KWMALE--SLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 35/208 (16%)
Query: 87 FKDKLGQGGFGGVYKGRLLDD-----------------------FVNEVASISRTSHVNV 123
F + +G+G FG VY G LLD+ F+ E + SH NV
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 124 VTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 182
++LLG CL L+ +M +G L F+ N +T P + + + +AKG+++
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAKGMKF 149
Query: 183 LHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKE-GIVSSLLGARGIIGYIA 241
L S K +H D+ N +LDE F K++DFGLA+ KE V + GA+ + ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELV 269
E S + + KSDV+SFG+++ EL+
Sbjct: 207 LE--SLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 105/212 (49%), Gaps = 35/212 (16%)
Query: 83 LTNSFKDKLGQGGFGGVYKGRLLDD-----------------------FVNEVASISRTS 119
L F + +G+G FG VY G LLD+ F+ E + S
Sbjct: 35 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 94
Query: 120 HVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H NV++LLG CL L+ +M +G L F+ N +T P + + + +AK
Sbjct: 95 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAK 149
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKE-GIVSSLLGARGII 237
G+++L S K +H D+ N +LDE F K++DFGLA+ KE V + GA+ +
Sbjct: 150 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 206
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
++A E S + + KSDV+SFG+++ EL+
Sbjct: 207 KWMALE--SLQTQKFTTKSDVWSFGVLLWELM 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 105/212 (49%), Gaps = 35/212 (16%)
Query: 83 LTNSFKDKLGQGGFGGVYKGRLLDD-----------------------FVNEVASISRTS 119
L F + +G+G FG VY G LLD+ F+ E + S
Sbjct: 30 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 120 HVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H NV++LLG CL L+ +M +G L F+ N +T P + + + +AK
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAK 144
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKE-GIVSSLLGARGII 237
G+++L S K +H D+ N +LDE F K++DFGLA+ KE V + GA+ +
Sbjct: 145 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
++A E S + + KSDV+SFG+++ EL+
Sbjct: 202 KWMALE--SLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 105/212 (49%), Gaps = 35/212 (16%)
Query: 83 LTNSFKDKLGQGGFGGVYKGRLLDD-----------------------FVNEVASISRTS 119
L F + +G+G FG VY G LLD+ F+ E + S
Sbjct: 31 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 90
Query: 120 HVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H NV++LLG CL L+ +M +G L F+ N +T P + + + +AK
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAK 145
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKE-GIVSSLLGARGII 237
G+++L S K +H D+ N +LDE F K++DFGLA+ KE V + GA+ +
Sbjct: 146 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 202
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
++A E S + + KSDV+SFG+++ EL+
Sbjct: 203 KWMALE--SLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 35/208 (16%)
Query: 87 FKDKLGQGGFGGVYKGRLLDD-----------------------FVNEVASISRTSHVNV 123
F + +G+G FG VY G LLD+ F+ E + SH NV
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 124 VTLLGFCLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 182
++LLG CL L+ +M +G L F+ N +T P + + + +AKG+++
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAKGMKF 207
Query: 183 LHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKE-GIVSSLLGARGIIGYIA 241
L S K +H D+ N +LDE F K++DFGLA+ KE V + GA+ + ++A
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELV 269
E S + + KSDV+SFG+++ EL+
Sbjct: 265 LE--SLQTQKFTTKSDVWSFGVLLWELM 290
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 29/200 (14%)
Query: 89 DKLGQGGFGGVYKGRL------------------LDDFVNEVASISRTSHVNVVTLLGFC 130
++G G FG VYKG+ L F NEV + +T HVN++ +G+
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 131 LEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTK 190
+ A++ ++ SL ++ +T K+ +I A+G++YLH +
Sbjct: 76 TK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLH---AKS 126
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS-RNF 249
I+H D+K +NI L ED KI DFGLA + + G G I ++APEV ++
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDK 185
Query: 250 GEVSHKSDVYSFGMMIMELV 269
S +SDVY+FG+++ EL+
Sbjct: 186 NPYSFQSDVYAFGIVLYELM 205
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 29/200 (14%)
Query: 89 DKLGQGGFGGVYKGRL------------------LDDFVNEVASISRTSHVNVVTLLGFC 130
++G G FG VYKG+ L F NEV + +T HVN++ +G+
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 131 LEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTK 190
A++ ++ SL ++ +T K+ +I A+G++YLH +
Sbjct: 74 -TAPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLH---AKS 124
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS-RNF 249
I+H D+K +NI L ED KI DFGLA + + G G I ++APEV ++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDK 183
Query: 250 GEVSHKSDVYSFGMMIMELV 269
S +SDVY+FG+++ EL+
Sbjct: 184 NPYSFQSDVYAFGIVLYELM 203
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 29/199 (14%)
Query: 90 KLGQGGFGGVYKGRL------------------LDDFVNEVASISRTSHVNVVTLLGFCL 131
++G G FG VYKG+ L F NEV + +T HVN++ +G+
Sbjct: 20 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 132 EGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
+ A++ ++ SL ++ +T K+ +I A+G++YLH + I
Sbjct: 80 K-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLH---AKSI 130
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS-RNFG 250
+H D+K +NI L ED KI DFGLA + + G G I ++APEV ++
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 251 EVSHKSDVYSFGMMIMELV 269
S +SDVY+FG+++ EL+
Sbjct: 190 PYSFQSDVYAFGIVLYELM 208
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 29/199 (14%)
Query: 90 KLGQGGFGGVYKGRL------------------LDDFVNEVASISRTSHVNVVTLLGFCL 131
++G G FG VYKG+ L F NEV + +T HVN++ +G+
Sbjct: 42 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 101
Query: 132 EGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
+ A++ ++ SL ++ +T K+ +I A+G++YLH + I
Sbjct: 102 KPQ-LAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLH---AKSI 152
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS-RNFG 250
+H D+K +NI L ED KI DFGLA + + G G I ++APEV ++
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 251 EVSHKSDVYSFGMMIMELV 269
S +SDVY+FG+++ EL+
Sbjct: 212 PYSFQSDVYAFGIVLYELM 230
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 29/200 (14%)
Query: 89 DKLGQGGFGGVYKGRL------------------LDDFVNEVASISRTSHVNVVTLLGFC 130
++G G FG VYKG+ L F NEV + +T HVN++ +G+
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 131 LEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTK 190
+ A++ ++ SL ++ +T K+ +I A+G++YLH +
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLH---AKS 124
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS-RNF 249
I+H D+K +NI L ED KI DFGLA + + G G I ++APEV ++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDK 183
Query: 250 GEVSHKSDVYSFGMMIMELV 269
S +SDVY+FG+++ EL+
Sbjct: 184 NPYSFQSDVYAFGIVLYELM 203
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 29/199 (14%)
Query: 90 KLGQGGFGGVYKGRL------------------LDDFVNEVASISRTSHVNVVTLLGFCL 131
++G G FG VYKG+ L F NEV + +T HVN++ +G+
Sbjct: 20 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 132 EGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
+ A++ ++ SL ++ +T K+ +I A+G++YLH + I
Sbjct: 80 K-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLH---AKSI 130
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS-RNFG 250
+H D+K +NI L ED KI DFGLA + + G G I ++APEV ++
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 251 EVSHKSDVYSFGMMIMELV 269
S +SDVY+FG+++ EL+
Sbjct: 190 PYSFQSDVYAFGIVLYELM 208
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 29/199 (14%)
Query: 90 KLGQGGFGGVYKGRL------------------LDDFVNEVASISRTSHVNVVTLLGFCL 131
++G G FG VYKG+ L F NEV + +T HVN++ +G+
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 132 EGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
+ A++ ++ SL ++ +T K+ +I A+G++YLH + I
Sbjct: 103 K-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLH---AKSI 153
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS-RNFG 250
+H D+K +NI L ED KI DFGLA + + G G I ++APEV ++
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 251 EVSHKSDVYSFGMMIMELV 269
S +SDVY+FG+++ EL+
Sbjct: 213 PYSFQSDVYAFGIVLYELM 231
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 119/277 (42%), Gaps = 43/277 (15%)
Query: 86 SFKDKLGQGGFGGVYKGRLL-----------------DDFVNEVASISRTSHVNVVTLLG 128
+F ++G G FG V+ G L +DF+ E + + SH +V L G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCS 188
CLE L++EFM +G L ++ E + + + + +G+ YL
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEA-- 122
Query: 189 TKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRN 248
++H D+ N L+ E+ K+SDFG+ + + +S G + + + +PEVFS
Sbjct: 123 -SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFS-- 177
Query: 249 FGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVT 308
F S KSDV+SFG+++ E V + + S+SEV + P + +
Sbjct: 178 FSRYSSKSDVWSFGVLMWE-VFSEGKIPYENRSNSEV------VEDISTGFRLYKPRLAS 230
Query: 309 RKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQG 345
+I C + RP DRP + ++ L
Sbjct: 231 THVYQIMNH-------CWKERPEDRPAFSRLLRQLAA 260
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 33/200 (16%)
Query: 89 DKLGQGGFGGVYKGRLLDD--------------------FVNEVASISRTSHVNVVTLLG 128
+++G+G FG V+ GRL D F+ E + + SH N+V L+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCS 188
C + ++ E + G F+ LR + + ++V A G+EYL C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGAR-----LRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 189 TKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI-IGYIAPEVFSR 247
+H D+ N L+ E KISDFG+++ +G+ ++ G R + + + APE
Sbjct: 235 ---IHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVXAASGGLRQVPVKWTAPEAL-- 287
Query: 248 NFGEVSHKSDVYSFGMMIME 267
N+G S +SDV+SFG+++ E
Sbjct: 288 NYGRYSSESDVWSFGILLWE 307
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 33/200 (16%)
Query: 89 DKLGQGGFGGVYKGRLLDD--------------------FVNEVASISRTSHVNVVTLLG 128
+++G+G FG V+ GRL D F+ E + + SH N+V L+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCS 188
C + ++ E + G F+ LR + + ++V A G+EYL C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGAR-----LRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 189 TKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI-IGYIAPEVFSR 247
+H D+ N L+ E KISDFG+++ +G+ ++ G R + + + APE
Sbjct: 235 ---IHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPEAL-- 287
Query: 248 NFGEVSHKSDVYSFGMMIME 267
N+G S +SDV+SFG+++ E
Sbjct: 288 NYGRYSSESDVWSFGILLWE 307
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 29/199 (14%)
Query: 90 KLGQGGFGGVYKGRL------------------LDDFVNEVASISRTSHVNVVTLLGFCL 131
++G G FG VYKG+ L F NEV + +T HVN++ +G+
Sbjct: 35 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 94
Query: 132 EGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
+ A++ ++ SL ++ +T K+ +I A+G++YLH + I
Sbjct: 95 KPQ-LAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLH---AKSI 145
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS-RNFG 250
+H D+K +NI L ED KI DFGLA + G G I ++APEV ++
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 251 EVSHKSDVYSFGMMIMELV 269
S +SDVY+FG+++ EL+
Sbjct: 205 PYSFQSDVYAFGIVLYELM 223
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 111/234 (47%), Gaps = 42/234 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ G+T K YLR ++ ++ IA G+ Y+ +
Sbjct: 75 -EPIXIVTEYMSKGSLLDFL-KGETGK---YLRLPQLVDMAAQIASGMAYVER---MNYV 126
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNE--XTARQGAKFPIKWTAPE--AALYGRF 182
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLP 304
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 183 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMP 225
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 29/199 (14%)
Query: 90 KLGQGGFGGVYKGRL------------------LDDFVNEVASISRTSHVNVVTLLGFCL 131
++G G FG VYKG+ L F NEV + +T HVN++ +G+
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 132 EGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
+ A++ ++ SL ++ +T K+ +I A+G++YLH + I
Sbjct: 103 K-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLH---AKSI 153
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS-RNFG 250
+H D+K +NI L ED KI DFGLA + G G I ++APEV ++
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 251 EVSHKSDVYSFGMMIMELV 269
S +SDVY+FG+++ EL+
Sbjct: 213 PYSFQSDVYAFGIVLYELM 231
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 29/200 (14%)
Query: 89 DKLGQGGFGGVYKGRL------------------LDDFVNEVASISRTSHVNVVTLLGFC 130
++G G FG VYKG+ L F NEV + +T HVN++ +G+
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 131 LEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTK 190
+ A++ ++ SL ++ +T K+ +I A+G++YLH +
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLH---AKS 124
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS-RNF 249
I+H D+K +NI L ED KI DFGLA + G G I ++APEV ++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDK 183
Query: 250 GEVSHKSDVYSFGMMIMELV 269
S +SDVY+FG+++ EL+
Sbjct: 184 NPYSFQSDVYAFGIVLYELM 203
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 125/284 (44%), Gaps = 43/284 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL------------------LDDFVNEVASISRTSH 120
++++ + K KLG G +G VY G +++F+ E A + H
Sbjct: 28 EMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 87
Query: 121 VNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGL 180
N+V LLG C ++ E+MP G+L ++ + + + + + I+ +
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVV----LLYMATQISSAM 143
Query: 181 EYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYI 240
EYL +H D+ N L+ E+ K++DFGL++L T ++ GA+ I +
Sbjct: 144 EYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGD--TYTAHAGAKFPIKWT 198
Query: 241 APEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDRE 300
APE + N S KSDV++FG+++ E+ + G+D S +Y +E+
Sbjct: 199 APESLAYN--TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYDLLEKGYR 249
Query: 301 FKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
+ P K E+ + C + P+DRP E + +
Sbjct: 250 MEQPEGCPPKVYELMRA-------CWKWSPADRPSFAETHQAFE 286
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 47/264 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ G+T K YLR ++ ++ IA G+ Y+ +
Sbjct: 78 -EPIYIVTEYMSKGSLLDFL-KGETGK---YLRLPQLVDMAAQIASGMAYVER---MNYV 129
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRF 185
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLPGVVTRK 310
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 186 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMPC----- 229
Query: 311 ENEIAKKMIIVGLWCIQARPSDRP 334
E + + + C + P +RP
Sbjct: 230 PPECPESLHDLMCQCWRKEPEERP 253
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 47/264 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ G+T K YLR ++ ++ IA G+ Y+ +
Sbjct: 334 -EPIYIVTEYMSKGSLLDFL-KGETGK---YLRLPQLVDMAAQIASGMAYVER---MNYV 385
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRF 441
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLPGVVTRK 310
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 442 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMPC----- 485
Query: 311 ENEIAKKMIIVGLWCIQARPSDRP 334
E + + + C + P +RP
Sbjct: 486 PPECPESLHDLMCQCWRKEPEERP 509
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 47/264 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ G+T K YLR ++ ++ IA G+ Y+ +
Sbjct: 251 -EPIYIVTEYMSKGSLLDFL-KGETGK---YLRLPQLVDMAAQIASGMAYVER---MNYV 302
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRF 358
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLPGVVTRK 310
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 359 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMPC----- 402
Query: 311 ENEIAKKMIIVGLWCIQARPSDRP 334
E + + + C + P +RP
Sbjct: 403 PPECPESLHDLMCQCWRKEPEERP 426
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 125/278 (44%), Gaps = 51/278 (18%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ G+T K YLR ++ ++ IA G+ Y+ +
Sbjct: 251 -EPIYIVTEYMSKGSLLDFL-KGETGK---YLRLPQLVDMAAQIASGMAYVER---MNYV 302
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRF 358
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLPGVVTRK 310
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 359 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMPC----- 402
Query: 311 ENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGSTE 348
E + + + C + P +RP E LQ E
Sbjct: 403 PPECPESLHDLMCQCWRKEPEERP----TFEYLQAFLE 436
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 42/234 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ G+T K YLR ++ ++ IA G+ Y+ +
Sbjct: 82 -EPIYIVTEYMNKGSLLDFL-KGETGK---YLRLPQLVDMSAQIASGMAYVER---MNYV 133
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGLA+L E GA+ I + APE + +G
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQ--GAKFPIKWTAPE--AALYGRF 189
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLP 304
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 190 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMP 232
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 47/264 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ G+T K YLR ++ ++ IA G+ Y+ +
Sbjct: 82 -EPIYIVTEYMNKGSLLDFL-KGETGK---YLRLPQLVDMSAQIASGMAYVER---MNYV 133
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRF 189
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLPGVVTRK 310
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 190 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMPC----- 233
Query: 311 ENEIAKKMIIVGLWCIQARPSDRP 334
E + + + C + P +RP
Sbjct: 234 PPECPESLHDLMCQCWRKEPEERP 257
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 47/264 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ G+T K YLR ++ ++ IA G+ Y+ +
Sbjct: 251 -EPIYIVGEYMSKGSLLDFL-KGETGK---YLRLPQLVDMAAQIASGMAYVER---MNYV 302
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRF 358
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLPGVVTRK 310
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 359 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMPC----- 402
Query: 311 ENEIAKKMIIVGLWCIQARPSDRP 334
E + + + C + P +RP
Sbjct: 403 PPECPESLHDLMCQCWRKEPEERP 426
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 43/213 (20%)
Query: 86 SFKDKLGQGGFGGVYKGRLLDDFVNEVAS-------ISRT--------------SHVNVV 124
+ ++ +G GGFG VY+ + D V A+ IS+T H N++
Sbjct: 10 TLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 125 TLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 184
L G CL+ N L+ EF G L + V +G P + W + IA+G+ YLH
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPLNR-VLSGKRIPPDILVNW------AVQIARGMNYLH 122
Query: 185 HGCSTKILHFDIKPHNILLDEDF--------CPKISDFGLAKLCTTKEGIVSSLLGARGI 236
I+H D+K NIL+ + KI+DFGLA +E ++ + A G
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-----REWHRTTKMSAAGA 177
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
++APEV + S SDV+S+G+++ EL+
Sbjct: 178 YAWMAPEVIRASM--FSKGSDVWSYGVLLWELL 208
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 25/202 (12%)
Query: 70 LPLKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGF 129
LP KR F +K L + + +K + DF++E + + + H NV+ L G
Sbjct: 56 LPGKREIFVAIKTLKSGYTEKQRR-------------DFLSEASIMGQFDHPNVIHLEGV 102
Query: 130 CLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCST 189
+ +I EFM NGSL+ F+ D ++ ++ GIA G++YL
Sbjct: 103 VTKSTPVMIITEFMENGSLDSFLRQNDGQ-----FTVIQLVGMLRGIAAGMKYL---ADM 154
Query: 190 KILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSLLGARGIIGYIAPEVFSR 247
+H D+ NIL++ + K+SDFGL++ T + +S LG + I + APE
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI-- 212
Query: 248 NFGEVSHKSDVYSFGMMIMELV 269
+ + + SDV+S+G+++ E++
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVM 234
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 42/234 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ +
Sbjct: 74 -EPIYIVTEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYV 125
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRF 181
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLP 304
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 182 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMP 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 42/234 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ +
Sbjct: 85 -EPIYIVTEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRF 192
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLP 304
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 193 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMP 235
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 42/234 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ +
Sbjct: 85 -EPIYIVIEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNE--XTARQGAKFPIKWTAPE--AALYGRF 192
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLP 304
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 193 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMP 235
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 10/171 (5%)
Query: 100 YKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK 159
Y R DF++E + + + H N++ L G G ++ E+M NGSL+ F+ D
Sbjct: 89 YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQF 148
Query: 160 PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL 219
++ ++ G+ G+ YL +H D+ N+L+D + K+SDFGL+++
Sbjct: 149 TIM-----QLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200
Query: 220 CTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+ G + I + APE + F S SDV+SFG+++ E++
Sbjct: 201 LEDDPDAAXTTTGGKIPIRWTAPEAIA--FRTFSSASDVWSFGVVMWEVLA 249
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 42/234 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ +
Sbjct: 76 -EPIYIVTEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYV 127
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRF 183
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLP 304
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 184 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMP 226
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 125/290 (43%), Gaps = 51/290 (17%)
Query: 88 KDKLGQGGFGGVYKGRLLDD---------------FVNEVASISRTSHVNVVTLLGFCLE 132
++ +G+G FG V K + F+ E+ +SR +H N+V L G CL
Sbjct: 14 EEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL- 72
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
N L+ E+ GSL ++ + P Y + ++G+ YLH ++
Sbjct: 73 -NPVCLVMEYAEGGSLYNVLHGAE---PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 193 HFDIKPHNILL-DEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS-RNFG 250
H D+KP N+LL KI DFG A C I + + +G ++APEVF N+
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTA--CD----IQTHMTNNKGSAAWMAPEVFEGSNYS 182
Query: 251 EVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRK 310
E K DV+S+G+++ E++ + D E+ P +R + P ++
Sbjct: 183 E---KCDVFSWGIILWEVITRRKPFD-------EIGGP--AFRIMWAVHNGTRPPLIKNL 230
Query: 311 ENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ-------GSTEALQIP 353
I M C PS RP M E+++++ G+ E LQ P
Sbjct: 231 PKPIESLMTR----CWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYP 276
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 125/290 (43%), Gaps = 51/290 (17%)
Query: 88 KDKLGQGGFGGVYKGRLLDD---------------FVNEVASISRTSHVNVVTLLGFCLE 132
++ +G+G FG V K + F+ E+ +SR +H N+V L G CL
Sbjct: 13 EEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL- 71
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
N L+ E+ GSL ++ + P Y + ++G+ YLH ++
Sbjct: 72 -NPVCLVMEYAEGGSLYNVLHGAE---PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 193 HFDIKPHNILL-DEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS-RNFG 250
H D+KP N+LL KI DFG A C I + + +G ++APEVF N+
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTA--CD----IQTHMTNNKGSAAWMAPEVFEGSNYS 181
Query: 251 EVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRK 310
E K DV+S+G+++ E++ + D E+ P +R + P ++
Sbjct: 182 E---KCDVFSWGIILWEVITRRKPFD-------EIGGP--AFRIMWAVHNGTRPPLIKNL 229
Query: 311 ENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ-------GSTEALQIP 353
I M C PS RP M E+++++ G+ E LQ P
Sbjct: 230 PKPIESLMTR----CWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYP 275
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 42/234 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ +
Sbjct: 85 -EPIYIVIEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRF 192
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLP 304
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 193 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMP 235
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 42/234 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ +
Sbjct: 85 -EPIYIVTEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRF 192
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLP 304
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 193 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMP 235
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 42/234 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ +
Sbjct: 85 -EPIYIVCEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRF 192
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLP 304
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 193 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMP 235
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 10/171 (5%)
Query: 100 YKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK 159
Y R DF++E + + + H N++ L G G ++ E+M NGSL+ F+ D
Sbjct: 89 YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQF 148
Query: 160 PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL 219
++ ++ G+ G+ YL +H D+ N+L+D + K+SDFGL+++
Sbjct: 149 TIM-----QLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200
Query: 220 CTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+ G + I + APE + F S SDV+SFG+++ E++
Sbjct: 201 LEDDPDAAYTTTGGKIPIRWTAPEAIA--FRTFSSASDVWSFGVVMWEVLA 249
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 128/298 (42%), Gaps = 47/298 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHV 121
+V + T ++LG G FG V+ G D F+ E + + H
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 77
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L + +I E+M NGSL F+ K L K+ ++ IA+G+
Sbjct: 78 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMA 132
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
++ +H D++ NIL+ + KI+DFGLA+L E GA+ I + A
Sbjct: 133 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTA 187
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE N+G + KSDV+SFG+++ E+V + + +P V Q+ E
Sbjct: 188 PEAI--NYGTFTIKSDVWSFGILLTEIV-----------THGRIPYPGMTNPEVIQNLE- 233
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPP---MNEVIEMLQGSTEALQIPPTP 356
G + + +++ + C + RP DRP + V+E +TE Q P P
Sbjct: 234 --RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG-QFQPQP 288
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 124/259 (47%), Gaps = 45/259 (17%)
Query: 68 GPLPLKRYNFSDVKKLTNSFKDKLGQGGFG----GVYKGRL-------------LDDFVN 110
G + LKR + +K+L G G FG G +KG+ D+F
Sbjct: 1 GHMELKREEITLLKEL--------GSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQ 52
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-NGDTSKPCQYLRWEKM 169
E ++ + SH +V G C + ++ E++ NG L ++ +G +P Q L
Sbjct: 53 EAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL----- 107
Query: 170 YEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSS 229
E+ + +G+ +L S + +H D+ N L+D D C K+SDFG+ + + + S
Sbjct: 108 -EMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS- 162
Query: 230 LLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFP- 288
+G + + + APEVF ++ + S KSDV++FG+++ E+ + + ++SEV
Sbjct: 163 -VGTKFPVKWSAPEVF--HYFKYSSKSDVWAFGILMWEVFSL-GKMPYDLYTNSEVVLKV 218
Query: 289 ---HWIYR-HVEQDREFKL 303
H +YR H+ D +++
Sbjct: 219 SQGHRLYRPHLASDTIYQI 237
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 45/221 (20%)
Query: 87 FKDKLGQGGFGGVYKGRLLDD--------------------------FVNEVASISRTSH 120
++ ++G+GGFG V+KGRL+ D F EV +S +H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 121 VNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGL 180
N+V L G L N ++ EF+P G L + D + P ++W +++ IA G+
Sbjct: 83 PNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL--DKAHP---IKWSVKLRLMLDIALGI 135
Query: 181 EYLHHGCSTKILHFDIKPHNIL---LDED--FCPKISDFGLAKLCTTKEGIVSSLLGARG 235
EY+ + + I+H D++ NI LDE+ C K++DFGL++ V S+ G G
Sbjct: 136 EYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS------VHSVSGLLG 188
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLD 276
++APE + K+D YSF M++ ++ + D
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 128/298 (42%), Gaps = 47/298 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHV 121
+V + T ++LG G FG V+ G D F+ E + + H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L + +I E+M NGSL F+ K L K+ ++ IA+G+
Sbjct: 75 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMA 129
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
++ +H D++ NIL+ + KI+DFGLA+L E GA+ I + A
Sbjct: 130 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTA 184
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE N+G + KSDV+SFG+++ E+V + + +P V Q+ E
Sbjct: 185 PEAI--NYGTFTIKSDVWSFGILLTEIV-----------THGRIPYPGMTNPEVIQNLER 231
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPP---MNEVIEMLQGSTEALQIPPTP 356
G + + +++ + C + RP DRP + V+E +TE Q P P
Sbjct: 232 ---GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG-QYQPQP 285
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 128/298 (42%), Gaps = 47/298 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHV 121
+V + T ++LG G FG V+ G D F+ E + + H
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 76
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L + +I E+M NGSL F+ K L K+ ++ IA+G+
Sbjct: 77 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMA 131
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
++ +H D++ NIL+ + KI+DFGLA+L E GA+ I + A
Sbjct: 132 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTA 186
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE N+G + KSDV+SFG+++ E+V + + +P V Q+ E
Sbjct: 187 PEAI--NYGTFTIKSDVWSFGILLTEIV-----------THGRIPYPGMTNPEVIQNLER 233
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPP---MNEVIEMLQGSTEALQIPPTP 356
G + + +++ + C + RP DRP + V+E +TE Q P P
Sbjct: 234 ---GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG-QYQPQP 287
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 128/298 (42%), Gaps = 47/298 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHV 121
+V + T ++LG G FG V+ G D F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L + +I E+M NGSL F+ K L K+ ++ IA+G+
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMA 123
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
++ +H D++ NIL+ + KI+DFGLA+L E GA+ I + A
Sbjct: 124 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTA 178
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE N+G + KSDV+SFG+++ E+V + + +P V Q+ E
Sbjct: 179 PEAI--NYGTFTIKSDVWSFGILLTEIV-----------THGRIPYPGMTNPEVIQNLE- 224
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPP---MNEVIEMLQGSTEALQIPPTP 356
G + + +++ + C + RP DRP + V+E +TE Q P P
Sbjct: 225 --RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG-QYQPQP 279
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 42/234 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ +
Sbjct: 85 -EPIYIVTEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D+ NIL+ E+ K++DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRF 192
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLP 304
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 193 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMP 235
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 34/203 (16%)
Query: 91 LGQGGFGGVYKGRLLD------------------------DFVNEVASISRTSHVNVVTL 126
+G G FG VYKG L DF+ E + + SH N++ L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
G + +I E+M NG+L+KF+ D ++ ++ GIA G++YL
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL-----QLVGMLRGIAAGMKYL--- 163
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
+ +H D+ NIL++ + K+SDFGL+++ + G + I + APE S
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 247 RNFGEVSHKSDVYSFGMMIMELV 269
+ + + SDV+SFG+++ E++
Sbjct: 224 --YRKFTSASDVWSFGIVMWEVM 244
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 130/298 (43%), Gaps = 47/298 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHV 121
+V + T ++LG G FG V+ G D F+ E + + H
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 78
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L + +I E+M NGSL F+ K L K+ ++ IA+G+
Sbjct: 79 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMA 133
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
++ +H D++ NIL+ + KI+DFGLA+L E ++ GA+ I + A
Sbjct: 134 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--YTAREGAKFPIKWTA 188
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE N+G + KSDV+SFG+++ E+V + + +P V Q+ E
Sbjct: 189 PEAI--NYGTFTIKSDVWSFGILLTEIV-----------THGRIPYPGMTNPEVIQNLE- 234
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPP---MNEVIEMLQGSTEALQIPPTP 356
G + + +++ + C + RP DRP + V+E +TE Q P P
Sbjct: 235 --RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG-QYQPQP 289
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 45/221 (20%)
Query: 87 FKDKLGQGGFGGVYKGRLLDD--------------------------FVNEVASISRTSH 120
++ ++G+GGFG V+KGRL+ D F EV +S +H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 121 VNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGL 180
N+V L G L N ++ EF+P G L + D + P ++W +++ IA G+
Sbjct: 83 PNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL--DKAHP---IKWSVKLRLMLDIALGI 135
Query: 181 EYLHHGCSTKILHFDIKPHNIL---LDED--FCPKISDFGLAKLCTTKEGIVSSLLGARG 235
EY+ + + I+H D++ NI LDE+ C K++DFG T + V S+ G G
Sbjct: 136 EYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG------TSQQSVHSVSGLLG 188
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLD 276
++APE + K+D YSF M++ ++ + D
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 42/234 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M G L F+ G+ K YLR ++ ++ IA G+ Y+ +
Sbjct: 85 -EPIYIVMEYMSKGCLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRF 192
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLP 304
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 193 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMP 235
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 42/234 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M G L F+ G+ K YLR ++ ++ IA G+ Y+ +
Sbjct: 85 -EPIYIVTEYMSKGCLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYV 136
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPE--AALYGRF 192
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLP 304
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 193 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMP 235
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 122/251 (48%), Gaps = 33/251 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YN 154
L D V+E+ + H N++TLLG C + +I E+ G+L +++ Y+
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 155 GDTSK-PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISD 213
D ++ P + + ++ + +A+G+EYL S K +H D+ N+L+ E+ KI+D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
FGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 201 FGLARDINNIDYYKKTTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLG 256
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ G+ +++ +++ P T NE+ M C A PS
Sbjct: 257 GSPYPGIPVEE-------LFKLLKEGHRMDKPANCT---NELYMMMRD----CWHAVPSQ 302
Query: 333 RPPMNEVIEML 343
RP +++E L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 42/234 (17%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLGQG FG V+ G + F+ E + + H +V L E
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ G+ K YLR ++ ++ IA G+ Y+ +
Sbjct: 252 -EPIYIVTEYMSKGSLLDFL-KGEMGK---YLRLPQLVDMAAQIASGMAYVER---MNYV 303
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ E+ K++DFGL +L E ++ GA+ I + APE + +G
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNE--YTARQGAKFPIKWTAPE--AALYGRF 359
Query: 253 SHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV--EQDREFKLP 304
+ KSDV+SFG+++ EL + V +P + R V + +R +++P
Sbjct: 360 TIKSDVWSFGILLTELT-----------TKGRVPYPGMVNREVLDQVERGYRMP 402
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 25/202 (12%)
Query: 70 LPLKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGF 129
LP KR F +K L + + +K + DF++E + + + H NV+ L G
Sbjct: 30 LPGKREIFVAIKTLKSGYTEKQRR-------------DFLSEASIMGQFDHPNVIHLEGV 76
Query: 130 CLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCST 189
+ +I EFM NGSL+ F+ D ++ ++ GIA G++YL
Sbjct: 77 VTKSTPVMIITEFMENGSLDSFLRQNDGQ-----FTVIQLVGMLRGIAAGMKYL---ADM 128
Query: 190 KILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSLLGARGIIGYIAPEVFSR 247
+H + NIL++ + K+SDFGL++ T + +S LG + I + APE
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI-- 186
Query: 248 NFGEVSHKSDVYSFGMMIMELV 269
+ + + SDV+S+G+++ E++
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVM 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 43/283 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHV 121
+V + T ++LG G FG V+ G D F+ E + + H
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 70
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L + +I E+M NGSL F+ K L K+ ++ IA+G+
Sbjct: 71 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMA 125
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
++ +H D++ NIL+ + KI+DFGLA+L E GA+ I + A
Sbjct: 126 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTA 180
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE N+G + KSDV+SFG+++ E+V + + +P V Q+ E
Sbjct: 181 PEAI--NYGTFTIKSDVWSFGILLTEIV-----------THGRIPYPGMTNPEVIQNLE- 226
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
G + + +++ + C + RP DRP + + +L+
Sbjct: 227 --RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 43/283 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHV 121
+V + T ++LG G FG V+ G D F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L + +I E+M NGSL F+ K L K+ ++ IA+G+
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMA 123
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
++ +H D++ NIL+ + KI+DFGLA+L E GA+ I + A
Sbjct: 124 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTA 178
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE N+G + KSDV+SFG+++ E+V + + +P V Q+ E
Sbjct: 179 PEAI--NYGTFTIKSDVWSFGILLTEIV-----------THGRIPYPGMTNPEVIQNLE- 224
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
G + + +++ + C + RP DRP + + +L+
Sbjct: 225 --RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 43/283 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHV 121
+V + T ++LG G FG V+ G D F+ E + + H
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 69
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L + +I E+M NGSL F+ K L K+ ++ IA+G+
Sbjct: 70 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMA 124
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
++ +H D++ NIL+ + KI+DFGLA+L E GA+ I + A
Sbjct: 125 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPIKWTA 179
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE N+G + KSDV+SFG+++ E+V + + +P V Q+ E
Sbjct: 180 PEAI--NYGTFTIKSDVWSFGILLTEIV-----------THGRIPYPGMTNPEVIQNLE- 225
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
G + + +++ + C + RP DRP + + +L+
Sbjct: 226 --RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 43/283 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHV 121
+V + T ++LG G FG V+ G D F+ E + + H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L + +I E+M NGSL F+ K L K+ ++ IA+G+
Sbjct: 75 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMA 129
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
++ +H D++ NIL+ + KI+DFGLA+L E ++ GA+ I + A
Sbjct: 130 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--YTAREGAKFPIKWTA 184
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE N+G + KSDV+SFG+++ E+V + + +P V Q+ E
Sbjct: 185 PEAI--NYGTFTIKSDVWSFGILLTEIV-----------THGRIPYPGMTNPEVIQNLE- 230
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
G + + +++ + C + RP DRP + + +L+
Sbjct: 231 --RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 43/283 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHV 121
+V + T ++LG G FG V+ G D F+ E + + H
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 73
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L + +I E+M NGSL F+ K L K+ ++ IA+G+
Sbjct: 74 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMA 128
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
++ +H D++ NIL+ + KI+DFGLA+L E ++ GA+ I + A
Sbjct: 129 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--YTAREGAKFPIKWTA 183
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE N+G + KSDV+SFG+++ E+V + + +P V Q+ E
Sbjct: 184 PEAI--NYGTFTIKSDVWSFGILLTEIV-----------THGRIPYPGMTNPEVIQNLE- 229
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
G + + +++ + C + RP DRP + + +L+
Sbjct: 230 --RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 43/283 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHV 121
+V + T ++LG G FG V+ G D F+ E + + H
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 63
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L + +I E+M NGSL F+ K L K+ ++ IA+G+
Sbjct: 64 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMA 118
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
++ +H D++ NIL+ + KI+DFGLA+L E ++ GA+ I + A
Sbjct: 119 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--YTAREGAKFPIKWTA 173
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE N+G + KSDV+SFG+++ E+V + + +P V Q+ E
Sbjct: 174 PEAI--NYGTFTIKSDVWSFGILLTEIV-----------THGRIPYPGMTNPEVIQNLE- 219
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
G + + +++ + C + RP DRP + + +L+
Sbjct: 220 --RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 43/283 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHV 121
+V + T ++LG G FG V+ G D F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L + +I E+M NGSL F+ K L K+ ++ IA+G+
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMA 123
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
++ +H D++ NIL+ + KI+DFGLA+L E ++ GA+ I + A
Sbjct: 124 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--YTAREGAKFPIKWTA 178
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE N+G + KSDV+SFG+++ E+V + + +P V Q+ E
Sbjct: 179 PEAI--NYGTFTIKSDVWSFGILLTEIV-----------THGRIPYPGMTNPEVIQNLE- 224
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
G + + +++ + C + RP DRP + + +L+
Sbjct: 225 --RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 135
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 136 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 192
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 193 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 242
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 243 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 271
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 33/251 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YN 154
L D V+E+ + H N++ LLG C + +I E+ G+L +++ Y+
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 155 GDTSK-PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISD 213
D ++ P + + ++ + +A+G+EYL S K +H D+ N+L+ E+ KI+D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
FGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 201 FGLARDINNIDXXKKTTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLG 256
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ G+ +++ +++ P T NE+ M C A PS
Sbjct: 257 GSPYPGIPVEE-------LFKLLKEGHRMDKPANCT---NELYMMMRD----CWHAVPSQ 302
Query: 333 RPPMNEVIEML 343
RP +++E L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 45/221 (20%)
Query: 87 FKDKLGQGGFGGVYKGRLLDD--------------------------FVNEVASISRTSH 120
++ ++G+GGFG V+KGRL+ D F EV +S +H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 121 VNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGL 180
N+V L G L N ++ EF+P G L + D + P ++W +++ IA G+
Sbjct: 83 PNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL--DKAHP---IKWSVKLRLMLDIALGI 135
Query: 181 EYLHHGCSTKILHFDIKPHNIL---LDED--FCPKISDFGLAKLCTTKEGIVSSLLGARG 235
EY+ + + I+H D++ NI LDE+ C K++DF L++ V S+ G G
Sbjct: 136 EYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS------VHSVSGLLG 188
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLD 276
++APE + K+D YSF M++ ++ + D
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 52/274 (18%)
Query: 91 LGQGGFGGVYKG---------------RLLDD---------FVNEVASISRTSHVNVVTL 126
LG G FG VYKG ++L++ F++E ++ H ++V L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + L+ + MP+G L ++V+ + Q L W + IAKG+ YL
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLE- 157
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVF 245
+++H D+ N+L+ KI+DFGLA+L E ++ G + I ++A E
Sbjct: 158 --ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA-DGGKMPIKWMALECI 214
Query: 246 SRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPG 305
++ + +H+SDV+S+G+ I EL+ G+ + I +E+ P
Sbjct: 215 --HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE-------IPDLLEKGERLPQPP 265
Query: 306 VVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
+ T I M++V W I A RP E+
Sbjct: 266 ICT-----IDVYMVMVKCWMIDA--DSRPKFKEL 292
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 52/274 (18%)
Query: 91 LGQGGFGGVYKG---------------RLLDD---------FVNEVASISRTSHVNVVTL 126
LG G FG VYKG ++L++ F++E ++ H ++V L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + L+ + MP+G L ++V+ + Q L W + IAKG+ YL
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLE- 134
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVF 245
+++H D+ N+L+ KI+DFGLA+L E ++ G + I ++A E
Sbjct: 135 --ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA-DGGKMPIKWMALECI 191
Query: 246 SRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPG 305
++ + +H+SDV+S+G+ I EL+ G+ + I +E+ P
Sbjct: 192 --HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE-------IPDLLEKGERLPQPP 242
Query: 306 VVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
+ T I M++V W I A RP E+
Sbjct: 243 ICT-----IDVYMVMVKCWMIDA--DSRPKFKEL 269
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 135
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 136 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 192
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 193 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 242
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 243 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 271
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 134
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 191
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 192 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 241
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 242 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 270
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 117 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 168
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 169 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 225
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 226 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 275
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 276 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 304
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 83 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 134
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 191
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 192 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 241
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 242 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 270
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 138
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 139 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 195
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 196 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 245
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 246 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 274
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 86 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 137
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 194
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 195 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 244
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 245 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 273
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 136
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 193
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 194 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 243
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 244 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 272
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 136
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 193
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 194 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 243
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 244 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 272
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 134
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 191
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 192 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 241
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 242 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 270
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 43/273 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHV 121
++ + + + KLG G FG V+ ++ F+ E + H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 70
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L + +I EFM GSL F+ + + SK Q L K+ + IA+G+
Sbjct: 71 KLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSK--QPL--PKLIDFSAQIAEGMA 125
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
++ +H D++ NIL+ KI+DFGLA++ E ++ GA+ I + A
Sbjct: 126 FIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE--YTAREGAKFPIKWTA 180
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE NFG + KSDV+SFG+++ME+V G+ + + R +E R +
Sbjct: 181 PEAI--NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-------VIRALE--RGY 229
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRP 334
++P R EN +++ + + C + RP +RP
Sbjct: 230 RMP----RPEN-CPEELYNIMMRCWKNRPEERP 257
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 137
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 194
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 195 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 244
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 245 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 273
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 122/251 (48%), Gaps = 33/251 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YN 154
L D V+E+ + H N++ LLG C + +I E+ G+L +++ Y+
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 155 GDTSK-PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISD 213
D ++ P + + ++ + +A+G+EYL S K +H D+ N+L+ E+ KI+D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
FGLA+ + ++ G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 201 FGLARDINNIDYYKNTTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLG 256
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ G+ +++ +++ P T NE+ M C A PS
Sbjct: 257 GSPYPGIPVEE-------LFKLLKEGHRMDKPANCT---NELYMMMRD----CWHAVPSQ 302
Query: 333 RPPMNEVIEML 343
RP +++E L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 77 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 128
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 129 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 185
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 186 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 235
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 236 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 264
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 108 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 159
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 160 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 216
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 217 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 266
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 267 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 295
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 108/240 (45%), Gaps = 32/240 (13%)
Query: 120 HVNVVTLLGFCLE-GNNRALIYEFMPNGSL--------EKFVYNGDTSKPCQYLRWEKMY 170
H+NVV LLG C + G +I EF G+L +FV D K +L E +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK--DFLTLEHLI 147
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
+AKG+E+L S K +H D+ NILL E KI DFGLA+ V
Sbjct: 148 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK- 203
Query: 231 LGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPH 289
AR + ++APE +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 204 GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----- 255
Query: 290 WIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGSTEA 349
R +++ + P T +M L C PS RP +E++E L +A
Sbjct: 256 -FXRRLKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 307
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 36/250 (14%)
Query: 100 YKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK 159
Y + DF+ E + + + H N++ L G + ++ E+M NGSL+ F+ D
Sbjct: 62 YTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQF 121
Query: 160 PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL 219
++ ++ GI+ G++YL +H D+ NIL++ + K+SDFGL+++
Sbjct: 122 TVI-----QLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 173
Query: 220 CTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGV 279
+ G + I + APE + F + + SDV+S+G+++ E+V
Sbjct: 174 LEDDPEAAYTTRGGKIPIRWTAPEAIA--FRKFTSASDVWSYGIVMWEVVSYGER----- 226
Query: 280 DSSSEVYFPHW------IYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDR 333
P+W + + VE+ ++LP + + + + L C Q + R
Sbjct: 227 --------PYWEMTNQDVIKAVEEG--YRLPSPM-----DCPAALYQLMLDCWQKERNSR 271
Query: 334 PPMNEVIEML 343
P +E++ ML
Sbjct: 272 PKFDEIVNML 281
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 137
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 194
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 195 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 244
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 245 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 273
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 89 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 140
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 141 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 197
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 198 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 247
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 248 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 276
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 33/251 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YN 154
L D V+E+ + H N++ LLG C + +I E+ G+L +++ Y+
Sbjct: 71 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 130
Query: 155 GDTSK-PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISD 213
D ++ P + + ++ + +A+G+EYL S K +H D+ N+L+ E+ KI+D
Sbjct: 131 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIAD 187
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
FGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 188 FGLARDINNIDYYKKTTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLG 243
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ G+ +++ +++ P T NE+ M C A PS
Sbjct: 244 GSPYPGIPVEE-------LFKLLKEGHRMDKPANCT---NELYMMMRD----CWHAVPSQ 289
Query: 333 RPPMNEVIEML 343
RP +++E L
Sbjct: 290 RPTFKQLVEDL 300
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 33/251 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YN 154
L D V+E+ + H N++ LLG C + +I E+ G+L +++ Y+
Sbjct: 73 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 132
Query: 155 GDTSK-PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISD 213
D ++ P + + ++ + +A+G+EYL S K +H D+ N+L+ E+ KI+D
Sbjct: 133 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 189
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
FGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 190 FGLARDINNIDYYKKTTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLG 245
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ G+ +++ +++ P T NE+ M C A PS
Sbjct: 246 GSPYPGIPVEE-------LFKLLKEGHRMDKPANCT---NELYMMMRD----CWHAVPSQ 291
Query: 333 RPPMNEVIEML 343
RP +++E L
Sbjct: 292 RPTFKQLVEDL 302
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 141
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 142 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 198
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 199 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 248
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 249 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 277
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 33/251 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YN 154
L D V+E+ + H N++ LLG C + +I E+ G+L +++ Y+
Sbjct: 130 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 189
Query: 155 GDTSK-PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISD 213
D ++ P + + ++ + +A+G+EYL S K +H D+ N+L+ E+ KI+D
Sbjct: 190 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 246
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
FGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 247 FGLARDINNIDYYKKTTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLG 302
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ G+ +++ +++ P T NE+ M C A PS
Sbjct: 303 GSPYPGIPVEE-------LFKLLKEGHRMDKPANCT---NELYMMMRD----CWHAVPSQ 348
Query: 333 RPPMNEVIEML 343
RP +++E L
Sbjct: 349 RPTFKQLVEDL 359
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 33/251 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YN 154
L D V+E+ + H N++ LLG C + +I E+ G+L +++ Y+
Sbjct: 76 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 135
Query: 155 GDTSK-PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISD 213
D ++ P + + ++ + +A+G+EYL S K +H D+ N+L+ E+ KI+D
Sbjct: 136 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 192
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
FGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 193 FGLARDINNIDYYKKTTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLG 248
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ G+ +++ +++ P T NE+ M C A PS
Sbjct: 249 GSPYPGIPVEE-------LFKLLKEGHRMDKPANCT---NELYMMMRD----CWHAVPSQ 294
Query: 333 RPPMNEVIEML 343
RP +++E L
Sbjct: 295 RPTFKQLVEDL 305
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 33/251 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YN 154
L D V+E+ + H N++ LLG C + +I E+ G+L +++ Y+
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 155 GDTSK-PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISD 213
D ++ P + + ++ + +A+G+EYL S K +H D+ N+L+ E+ KI+D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
FGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 201 FGLARDINNIDYYKKTTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLG 256
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ G+ +++ +++ P T NE+ M C A PS
Sbjct: 257 GSPYPGIPVEE-------LFKLLKEGHRMDKPANCT---NELYMMMRD----CWHAVPSQ 302
Query: 333 RPPMNEVIEML 343
RP +++E L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 47/227 (20%)
Query: 76 NFSDVKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTS---------------- 119
+++D+K F+D +G+G FG V K R+ D + A+I R
Sbjct: 13 DWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE 67
Query: 120 -------HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGD----------TSKPCQ 162
H N++ LLG C L E+ P+G+L F+ +
Sbjct: 68 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 127
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTT 222
L +++ +A+G++YL + +H D+ NIL+ E++ KI+DFGL++
Sbjct: 128 TLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---G 181
Query: 223 KEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+E V +G R + ++A E S N+ + SDV+S+G+++ E+V
Sbjct: 182 QEVYVKKTMG-RLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIV 225
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 125/274 (45%), Gaps = 43/274 (15%)
Query: 87 FKDKLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGF 129
+ KLG G FG V+ ++ F+ E + H +V L
Sbjct: 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 130 CLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCST 189
+ +I EFM GSL F+ + + SK Q L K+ + IA+G+ ++
Sbjct: 252 VTK-EPIYIITEFMAKGSLLDFLKSDEGSK--QPL--PKLIDFSAQIAEGMAFIEQ---R 303
Query: 190 KILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNF 249
+H D++ NIL+ KI+DFGLA++ E ++ GA+ I + APE NF
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE--YTAREGAKFPIKWTAPEAI--NF 359
Query: 250 GEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTR 309
G + KSDV+SFG+++ME+V G+ + + R +E R +++P R
Sbjct: 360 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-------VIRALE--RGYRMP----R 406
Query: 310 KENEIAKKMIIVGLWCIQARPSDRPPMNEVIEML 343
EN +++ + + C + RP +RP + +L
Sbjct: 407 PEN-CPEELYNIMMRCWKNRPEERPTFEYIQSVL 439
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 47/227 (20%)
Query: 76 NFSDVKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTS---------------- 119
+++D+K F+D +G+G FG V K R+ D + A+I R
Sbjct: 23 DWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE 77
Query: 120 -------HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGD----------TSKPCQ 162
H N++ LLG C L E+ P+G+L F+ +
Sbjct: 78 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 137
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTT 222
L +++ +A+G++YL + +H D+ NIL+ E++ KI+DFGL++
Sbjct: 138 TLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---G 191
Query: 223 KEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+E V +G R + ++A E S N+ + SDV+S+G+++ E+V
Sbjct: 192 QEVYVKKTMG-RLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIV 235
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 47/298 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHV 121
+V + T ++LG G G V+ G D F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L + +I E+M NGSL F+ K L K+ ++ IA+G+
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMA 123
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
++ +H D++ NIL+ + KI+DFGLA+L E GA+ I + A
Sbjct: 124 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTARE--GAKFPIKWTA 178
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE N+G + KSDV+SFG+++ E+V + + +P V Q+ E
Sbjct: 179 PEAI--NYGTFTIKSDVWSFGILLTEIV-----------THGRIPYPGMTNPEVIQNLE- 224
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPP---MNEVIEMLQGSTEALQIPPTP 356
G + + +++ + C + RP DRP + V+E +TE Q P P
Sbjct: 225 --RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG-QYQPQP 279
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 125/283 (44%), Gaps = 43/283 (15%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHV 121
+V + T ++LG G FG V+ G D F+ E + + H
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 64
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L + +I E+M NGSL F+ K L K+ ++ IA+G+
Sbjct: 65 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMA 119
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
++ +H +++ NIL+ + KI+DFGLA+L E ++ GA+ I + A
Sbjct: 120 FIEE---RNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE--YTAREGAKFPIKWTA 174
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE N+G + KSDV+SFG+++ E+V + + +P V Q+ E
Sbjct: 175 PEAI--NYGTFTIKSDVWSFGILLTEIV-----------THGRIPYPGMTNPEVIQNLE- 220
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
G + + +++ + C + RP DRP + + +L+
Sbjct: 221 --RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 116/250 (46%), Gaps = 36/250 (14%)
Query: 100 YKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK 159
Y + DF++E + + + H N++ L G + +I E+M NGSL+ F+ D
Sbjct: 69 YTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR- 127
Query: 160 PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL 219
++ ++ GI G++YL +H D+ NIL++ + K+SDFG++++
Sbjct: 128 ----FTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRV 180
Query: 220 CTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGV 279
+ G + I + APE + + + + SDV+S+G+++ E++
Sbjct: 181 LEDDPEAAYTTRGGKIPIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVMSYGER----- 233
Query: 280 DSSSEVYFPHW------IYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDR 333
P+W + + +E+ ++LP + + IA +++ W Q SDR
Sbjct: 234 --------PYWDMSNQDVIKAIEEG--YRLPPPM---DCPIALHQLMLDCW--QKERSDR 278
Query: 334 PPMNEVIEML 343
P +++ ML
Sbjct: 279 PKFGQIVNML 288
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 108/240 (45%), Gaps = 30/240 (12%)
Query: 120 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNGDTS----KP----CQYLRWEKMY 170
H+NVV LLG C + G +I EF G+L ++ + KP +L E +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
+AKG+E+L S K +H D+ NILL E KI DFGLA+ V
Sbjct: 152 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK- 207
Query: 231 LGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPH 289
AR + ++APE +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 208 GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----- 259
Query: 290 WIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGSTEA 349
R +++ + P T +M L C PS RP +E++E L +A
Sbjct: 260 -FCRRLKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 33/251 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YN 154
L D V+E+ + H N++ LLG C + +I E+ G+L +++ Y+
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 155 GDTSK-PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISD 213
D ++ P + + ++ + +A+G+EYL S K +H D+ N+L+ E+ KI+D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
FGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 201 FGLARDINNIDYYKKTTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLG 256
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ G+ +++ +++ P T NE+ M C A PS
Sbjct: 257 GSPYPGIPVEE-------LFKLLKEGHRMDKPANCT---NELYMMMRD----CWHAVPSQ 302
Query: 333 RPPMNEVIEML 343
RP +++E L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 35/252 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV----------- 152
L D ++E+ + H N++ LLG C + +I E+ G+L +++
Sbjct: 66 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 125
Query: 153 YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKIS 212
YN + P + L + + +A+G+EYL S K +H D+ N+L+ ED KI+
Sbjct: 126 YNP-SHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIA 181
Query: 213 DFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGC 271
DFGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 182 DFGLARDIHHIDYYKKTTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTL 237
Query: 272 KNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPS 331
+ GV +++ +++ P T NE+ M C A PS
Sbjct: 238 GGSPYPGVPVEE-------LFKLLKEGHRMDKPSNCT---NELYMMMRD----CWHAVPS 283
Query: 332 DRPPMNEVIEML 343
RP +++E L
Sbjct: 284 QRPTFKQLVEDL 295
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 35/252 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV----------- 152
L D ++E+ + H N++ LLG C + +I E+ G+L +++
Sbjct: 77 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 136
Query: 153 YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKIS 212
YN + P + L + + +A+G+EYL S K +H D+ N+L+ ED KI+
Sbjct: 137 YN-PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIA 192
Query: 213 DFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGC 271
DFGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 193 DFGLARDIHHIDYYKKTTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTL 248
Query: 272 KNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPS 331
+ GV +++ +++ P T NE+ M C A PS
Sbjct: 249 GGSPYPGVPVEE-------LFKLLKEGHRMDKPSNCT---NELYMMMRD----CWHAVPS 294
Query: 332 DRPPMNEVIEML 343
RP +++E L
Sbjct: 295 QRPTFKQLVEDL 306
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 35/252 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV----------- 152
L D ++E+ + H N++ LLG C + +I E+ G+L +++
Sbjct: 62 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYC 121
Query: 153 YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKIS 212
YN + P + L + + +A+G+EYL S K +H D+ N+L+ ED KI+
Sbjct: 122 YNP-SHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIA 177
Query: 213 DFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGC 271
DFGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 178 DFGLARDIHHIDYYKKTTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTL 233
Query: 272 KNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPS 331
+ GV +++ +++ P T NE+ M C A PS
Sbjct: 234 GGSPYPGVPVEE-------LFKLLKEGHRMDKPSNCT---NELYMMMRD----CWHAVPS 279
Query: 332 DRPPMNEVIEML 343
RP +++E L
Sbjct: 280 QRPTFKQLVEDL 291
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 35/252 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV----------- 152
L D ++E+ + H N++ LLG C + +I E+ G+L +++
Sbjct: 77 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYC 136
Query: 153 YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKIS 212
YN + P + L + + +A+G+EYL S K +H D+ N+L+ ED KI+
Sbjct: 137 YNP-SHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIA 192
Query: 213 DFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGC 271
DFGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 193 DFGLARDIHHIDYYKKTTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTL 248
Query: 272 KNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPS 331
+ GV +++ +++ P T NE+ M C A PS
Sbjct: 249 GGSPYPGVPVEE-------LFKLLKEGHRMDKPSNCT---NELYMMMRD----CWHAVPS 294
Query: 332 DRPPMNEVIEML 343
RP +++E L
Sbjct: 295 QRPTFKQLVEDL 306
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 35/252 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV----------- 152
L D ++E+ + H N++ LLG C + +I E+ G+L +++
Sbjct: 77 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYS 136
Query: 153 YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKIS 212
YN + P + L + + +A+G+EYL S K +H D+ N+L+ ED KI+
Sbjct: 137 YN-PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIA 192
Query: 213 DFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGC 271
DFGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 193 DFGLARDIHHIDYYKKTTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTL 248
Query: 272 KNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPS 331
+ GV +++ +++ P T NE+ M C A PS
Sbjct: 249 GGSPYPGVPVEE-------LFKLLKEGHRMDKPSNCT---NELYMMMRD----CWHAVPS 294
Query: 332 DRPPMNEVIEML 343
RP +++E L
Sbjct: 295 QRPTFKQLVEDL 306
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 35/252 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV----------- 152
L D ++E+ + H N++ LLG C + +I E+ G+L +++
Sbjct: 69 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 128
Query: 153 YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKIS 212
YN + P + L + + +A+G+EYL S K +H D+ N+L+ ED KI+
Sbjct: 129 YN-PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIA 184
Query: 213 DFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGC 271
DFGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 185 DFGLARDIHHIDYYKKTTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTL 240
Query: 272 KNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPS 331
+ GV +++ +++ P T NE+ M C A PS
Sbjct: 241 GGSPYPGVPVEE-------LFKLLKEGHRMDKPSNCT---NELYMMMRD----CWHAVPS 286
Query: 332 DRPPMNEVIEML 343
RP +++E L
Sbjct: 287 QRPTFKQLVEDL 298
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 35/252 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV----------- 152
L D ++E+ + H N++ LLG C + +I E+ G+L +++
Sbjct: 70 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 129
Query: 153 YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKIS 212
YN + P + L + + +A+G+EYL S K +H D+ N+L+ ED KI+
Sbjct: 130 YN-PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIA 185
Query: 213 DFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGC 271
DFGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 186 DFGLARDIHHIDYYKKTTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTL 241
Query: 272 KNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPS 331
+ GV +++ +++ P T NE+ M C A PS
Sbjct: 242 GGSPYPGVPVEE-------LFKLLKEGHRMDKPSNCT---NELYMMMRD----CWHAVPS 287
Query: 332 DRPPMNEVIEML 343
RP +++E L
Sbjct: 288 QRPTFKQLVEDL 299
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 116/250 (46%), Gaps = 36/250 (14%)
Query: 100 YKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK 159
Y + DF++E + + + H N++ L G + +I E+M NGSL+ F+ D
Sbjct: 48 YTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR- 106
Query: 160 PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL 219
++ ++ GI G++YL +H D+ NIL++ + K+SDFG++++
Sbjct: 107 ----FTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRV 159
Query: 220 CTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGV 279
+ G + I + APE + + + + SDV+S+G+++ E++
Sbjct: 160 LEDDPEAAYTTRGGKIPIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVMSYGER----- 212
Query: 280 DSSSEVYFPHW------IYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDR 333
P+W + + +E+ ++LP + + IA +++ W Q SDR
Sbjct: 213 --------PYWDMSNQDVIKAIEEG--YRLPPPM---DCPIALHQLMLDCW--QKERSDR 257
Query: 334 PPMNEVIEML 343
P +++ ML
Sbjct: 258 PKFGQIVNML 267
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 33/251 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YN 154
L D V+E+ + H N++ LLG C + +I E+ G+L +++ Y+
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 155 GDTSK-PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISD 213
D ++ P + + ++ + +A+G+EYL S K +H D+ N+L+ E+ +I+D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIAD 200
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
FGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 201 FGLARDINNIDYYKKTTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLG 256
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ G+ +++ +++ P T NE+ M C A PS
Sbjct: 257 GSPYPGIPVEE-------LFKLLKEGHRMDKPANCT---NELYMMMRD----CWHAVPSQ 302
Query: 333 RPPMNEVIEML 343
RP +++E L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 35/252 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV----------- 152
L D ++E+ + H N++ LLG C + +I E+ G+L +++
Sbjct: 118 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 177
Query: 153 YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKIS 212
YN + P + L + + +A+G+EYL S K +H D+ N+L+ ED KI+
Sbjct: 178 YN-PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIA 233
Query: 213 DFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGC 271
DFGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 234 DFGLARDIHHIDYYKKTTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTL 289
Query: 272 KNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPS 331
+ GV +++ +++ P T NE+ M C A PS
Sbjct: 290 GGSPYPGVPVEE-------LFKLLKEGHRMDKPSNCT---NELYMMMRD----CWHAVPS 335
Query: 332 DRPPMNEVIEML 343
RP +++E L
Sbjct: 336 QRPTFKQLVEDL 347
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 33/251 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN--------- 154
L D ++E+ + H N++ LLG C + +I E+ G+L +++
Sbjct: 77 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFS 136
Query: 155 -GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISD 213
+ P + L + + +A+G+EYL S K +H D+ N+L+ ED KI+D
Sbjct: 137 FNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 193
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
FGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 194 FGLARDIHHIDXXKKTTNG-RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLG 249
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ GV +++ +++ P T NE+ M C A PS
Sbjct: 250 GSPYPGVPVEE-------LFKLLKEGHRMDKPSNCT---NELYMMMRD----CWHAVPSQ 295
Query: 333 RPPMNEVIEML 343
RP +++E L
Sbjct: 296 RPTFKQLVEDL 306
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 116/250 (46%), Gaps = 36/250 (14%)
Query: 100 YKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK 159
Y + DF++E + + + H N++ L G + +I E+M NGSL+ F+ D
Sbjct: 54 YTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR- 112
Query: 160 PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL 219
++ ++ GI G++YL +H D+ NIL++ + K+SDFG++++
Sbjct: 113 ----FTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRV 165
Query: 220 CTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGV 279
+ G + I + APE + + + + SDV+S+G+++ E++
Sbjct: 166 LEDDPEAAYTTRGGKIPIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVMSYGER----- 218
Query: 280 DSSSEVYFPHW------IYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDR 333
P+W + + +E+ ++LP + + IA +++ W Q SDR
Sbjct: 219 --------PYWDMSNQDVIKAIEEG--YRLPPPM---DCPIALHQLMLDCW--QKERSDR 263
Query: 334 PPMNEVIEML 343
P +++ ML
Sbjct: 264 PKFGQIVNML 273
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IA+G+ YL
Sbjct: 80 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGMNYLE- 131
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 132 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 188
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 189 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 238
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 239 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 267
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 112/242 (46%), Gaps = 36/242 (14%)
Query: 120 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG--- 175
H+NVV LLG C + G +I EF G+L ++ SK +++ ++ +Y+ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL----RSKRNEFVPYKDLYKDFLTLEH 145
Query: 176 -------IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVS 228
+AKG+E+L S K +H D+ NILL E KI DFGLA+ V
Sbjct: 146 LICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 202
Query: 229 SLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYF 287
AR + ++APE +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 203 K-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--- 255
Query: 288 PHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGST 347
R +++ + P T +M L C PS RP +E++E L
Sbjct: 256 ---FCRRLKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 305
Query: 348 EA 349
+A
Sbjct: 306 QA 307
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 100 YKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK 159
Y + DF+ E + + + H NVV L G G ++ EFM NG+L+ F+ D
Sbjct: 83 YTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQF 142
Query: 160 PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL 219
++ ++ GIA G+ YL +H D+ NIL++ + K+SDFGL+++
Sbjct: 143 TVI-----QLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV 194
Query: 220 CTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
V + G + + + APE + + + SDV+S+G+++ E++
Sbjct: 195 IEDDPEAVYTTTGGKIPVRWTAPEAI--QYRKFTSASDVWSYGIVMWEVM 242
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 126/295 (42%), Gaps = 62/295 (21%)
Query: 72 LKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRLL------------------------DD 107
LK F +K L++ G FG VYKG + +
Sbjct: 12 LKETEFKKIKVLSS--------GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 108 FVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RW 166
++E ++ + +V LLG CL + LI + MP G L +V + QYL W
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ IAKG+ YL +++H D+ N+L+ KI+DFGLAKL +E
Sbjct: 123 ------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
Query: 227 VSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
+ G + I ++A E + R + +H+SDV+S+G+ + EL+ + G+ +S
Sbjct: 174 YHA-EGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-- 227
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
I +E+ P + T I MI+V W I A RP E+I
Sbjct: 228 -----ISSILEKGERLPQPPICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 270
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 126/295 (42%), Gaps = 62/295 (21%)
Query: 72 LKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRLL------------------------DD 107
LK F +K L++ G FG VYKG + +
Sbjct: 19 LKETEFKKIKVLSS--------GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 108 FVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RW 166
++E ++ + +V LLG CL + LI + MP G L +V + QYL W
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW 129
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ IAKG+ YL +++H D+ N+L+ KI+DFGLAKL +E
Sbjct: 130 ------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
Query: 227 VSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
+ G + I ++A E + R + +H+SDV+S+G+ + EL+ + G+ +S
Sbjct: 181 YHA-EGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-- 234
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
I +E+ P + T I MI+V W I A RP E+I
Sbjct: 235 -----ISSILEKGERLPQPPICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 277
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 126/295 (42%), Gaps = 62/295 (21%)
Query: 72 LKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRLL------------------------DD 107
LK F +K L++ G FG VYKG + +
Sbjct: 19 LKETEFKKIKVLSS--------GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 108 FVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RW 166
++E ++ + +V LLG CL + LI + MP G L +V + QYL W
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 129
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ IAKG+ YL +++H D+ N+L+ KI+DFGLAKL +E
Sbjct: 130 ------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
Query: 227 VSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
+ G + I ++A E + R + +H+SDV+S+G+ + EL+ + G+ +S
Sbjct: 181 YHA-EGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-- 234
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
I +E+ P + T I MI+V W I A RP E+I
Sbjct: 235 -----ISSILEKGERLPQPPICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 277
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 119/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 138
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFG AKL +E + G + I ++A E +
Sbjct: 139 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWMALESI 195
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 196 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 245
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 246 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 274
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 119/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 136
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFG AKL +E + G + I ++A E +
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWMALESI 193
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 194 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 243
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 244 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 272
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 119/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 93 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 144
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 145 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 201
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 202 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 251
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+ W I A RP E+I
Sbjct: 252 PICT-----IDVYMIMRKCWMIDA--DSRPKFRELI 280
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 119/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 134
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFG AKL +E + G + I ++A E +
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWMALESI 191
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 192 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 241
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 242 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 270
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 119/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 141
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFG AKL +E + G + I ++A E +
Sbjct: 142 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWMALESI 198
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 199 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 248
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+V W I A RP E+I
Sbjct: 249 PICT-----IDVYMIMVKCWMIDA--DSRPKFRELI 277
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 33/251 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YN 154
L D V+E+ + H N++ LLG C + +I + G+L +++ Y+
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYS 143
Query: 155 GDTSK-PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISD 213
D ++ P + + ++ + +A+G+EYL S K +H D+ N+L+ E+ KI+D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
FGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 201 FGLARDINNIDYYKKTTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLG 256
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ G+ +++ +++ P T NE+ M C A PS
Sbjct: 257 GSPYPGIPVEE-------LFKLLKEGHRMDKPANCT---NELYMMMRD----CWHAVPSQ 302
Query: 333 RPPMNEVIEML 343
RP +++E L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 119/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 137
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 194
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 195 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 244
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+ W I A RP E+I
Sbjct: 245 PICT-----IDVYMIMRKCWMIDA--DSRPKFRELI 273
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 47/227 (20%)
Query: 76 NFSDVKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTS---------------- 119
+++D+K F+D +G+G FG V K R+ D + A+I R
Sbjct: 20 DWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE 74
Query: 120 -------HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGD----------TSKPCQ 162
H N++ LLG C L E+ P+G+L F+ +
Sbjct: 75 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 134
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTT 222
L +++ +A+G++YL + +H ++ NIL+ E++ KI+DFGL++
Sbjct: 135 TLSSQQLLHFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSR---G 188
Query: 223 KEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+E V +G R + ++A E S N+ + SDV+S+G+++ E+V
Sbjct: 189 QEVYVKKTMG-RLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIV 232
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 75 YNFSDVKKLTNSFKDKL-GQGGFGGVYKGRL-----------------------LDDFVN 110
+ F+ TN DK+ G G FG V GRL DF+
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
E + + + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QLV 150
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
++ GIA G++YL +H D+ NIL++ + K+SDFGLA++ +
Sbjct: 151 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT 207
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G + I + +PE + + + + SDV+S+G+++ E++
Sbjct: 208 RGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 126/288 (43%), Gaps = 57/288 (19%)
Query: 90 KLGQGGFGGVYKGRLLD-------------------------DFVNEVASISRTSHVNVV 124
+LGQG FG VY+G D +F+NE + + + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 125 TLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQYLRWEKMYEIVIGIAK 178
LLG +G ++ E M +G L+ ++ + + +P L ++M ++ IA
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIAD 141
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI-- 236
G+ YL+ + K +H D+ N ++ DF KI DFG+ + + G +G+
Sbjct: 142 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK---GGKGLLP 195
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
+ ++APE S G + SD++SFG+++ E+ G+ + E
Sbjct: 196 VRWMAPE--SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------------E 239
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
Q +F + G + + +++ + C Q P+ RP E++ +L+
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 119/276 (43%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 134
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLAKL +E + G + I ++A E +
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPIKWMALESI 191
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 192 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 241
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+ W I A RP E+I
Sbjct: 242 PICT-----IDVYMIMRKCWMIDA--DSRPKFRELI 270
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 33/251 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YN 154
L D V+E+ + H N++ LLG C + +I E+ G+L +++ +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXS 143
Query: 155 GDTSK-PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISD 213
D ++ P + + ++ + +A+G+EYL S K +H D+ N+L+ E+ KI+D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
FGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 201 FGLARDINNIDXXKKTTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLG 256
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ G+ +++ +++ P T NE+ M C A PS
Sbjct: 257 GSPYPGIPVEE-------LFKLLKEGHRMDKPANCT---NELYMMMRD----CWHAVPSQ 302
Query: 333 RPPMNEVIEML 343
RP +++E L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 106/241 (43%), Gaps = 31/241 (12%)
Query: 120 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFV---------YNGDTSKPCQYLRWEKM 169
H+NVV LLG C + G +I EF G+L ++ Y +L E +
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 170 YEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSS 229
+AKG+E+L S K +H D+ NILL E KI DFGLA+ V
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 230 LLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFP 288
AR + ++APE +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 208 -GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---- 259
Query: 289 HWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGSTE 348
R +++ + P T +M L C PS RP +E++E L +
Sbjct: 260 --FCRRLKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 349 A 349
A
Sbjct: 311 A 311
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 57/288 (19%)
Query: 90 KLGQGGFGGVYKGRLLD-------------------------DFVNEVASISRTSHVNVV 124
+LGQG FG VY+G D +F+NE + + + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 125 TLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQYLRWEKMYEIVIGIAK 178
LLG +G ++ E M +G L+ ++ + + +P L ++M ++ IA
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIAD 141
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI-- 236
G+ YL+ + K +H D+ N ++ DF KI DFG+ + + G +G+
Sbjct: 142 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK---GGKGLLP 195
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
+ ++APE S G + SD++SFG+++ E+ G+ + E
Sbjct: 196 VRWMAPE--SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------------E 239
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
Q +F + G + + +++ + C Q P RP E++ +L+
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 28/197 (14%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
KLG G FG V+ G + F+ E + H +V L +
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
+I EFM GSL F+ + + K + K+ + IA+G+ Y+ +
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGK----VLLPKLIDFSAQIAEGMAYIER---KNYI 131
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ N+L+ E KI+DFGLA++ E ++ GA+ I + APE NFG
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNE--YTAREGAKFPIKWTAPEAI--NFGCF 187
Query: 253 SHKSDVYSFGMMIMELV 269
+ KS+V+SFG+++ E+V
Sbjct: 188 TIKSNVWSFGILLYEIV 204
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 33/251 (13%)
Query: 105 LDDFVNEVASISRT-SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV---------YN 154
L D V+E+ + H N++ LLG C + +I + G+L +++ Y+
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYS 143
Query: 155 GDTSK-PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISD 213
D ++ P + + ++ + +A+G+EYL S K +H D+ N+L+ E+ KI+D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
FGLA+ + + G R + ++APE +F R + +H+SDV+SFG+++ E+
Sbjct: 201 FGLARDINNIDYYKKTTNG-RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLG 256
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ G+ +++ +++ P T NE+ M C A PS
Sbjct: 257 GSPYPGIPVEE-------LFKLLKEGHRMDKPANCT---NELYMMMRD----CWHAVPSQ 302
Query: 333 RPPMNEVIEML 343
RP +++E L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 57/288 (19%)
Query: 90 KLGQGGFGGVYKGRLLD-------------------------DFVNEVASISRTSHVNVV 124
+LGQG FG VY+G D +F+NE + + + +VV
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 125 TLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQYLRWEKMYEIVIGIAK 178
LLG +G ++ E M +G L+ ++ + + +P L ++M ++ IA
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIAD 138
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI-- 236
G+ YL+ + K +H D+ N ++ DF KI DFG+ + + G +G+
Sbjct: 139 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK---GGKGLLP 192
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
+ ++APE S G + SD++SFG+++ E+ G+ + E
Sbjct: 193 VRWMAPE--SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------------E 236
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
Q +F + G + + +++ + C Q P RP E++ +L+
Sbjct: 237 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
+LG G FG V+ G + F+ E + H +V L
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
+I E+M GSL F+ + + K + K+ + IA+G+ Y+ +
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGK----VLLPKLIDFSAQIAEGMAYIER---KNYI 132
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ N+L+ E KI+DFGLA++ E ++ GA+ I + APE NFG
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNE--YTAREGAKFPIKWTAPEAI--NFGCF 188
Query: 253 SHKSDVYSFGMMIMELV 269
+ KSDV+SFG+++ E+V
Sbjct: 189 TIKSDVWSFGILLYEIV 205
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 75 YNFSDVKKLTNSFKDKL-GQGGFGGVYKGRL-----------------------LDDFVN 110
+ F+ TN DK+ G G FG V GRL DF+
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
E + + + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QLV 150
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 151 GMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G + I + +PE + + + + SDV+S+G+++ E++
Sbjct: 208 RGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 88/174 (50%), Gaps = 12/174 (6%)
Query: 98 GVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDT 157
G Y R +F++E + + + H N++ L G ++ EFM NG+L+ F+ D
Sbjct: 52 GGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG 111
Query: 158 SKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLA 217
++ ++ GIA G+ YL +H D+ NIL++ + K+SDFGL+
Sbjct: 112 QFTVI-----QLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLS 163
Query: 218 KLC--TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + + +S LG + I + APE + F + + SD +S+G+++ E++
Sbjct: 164 RFLEENSSDPTYTSSLGGKIPIRWTAPEAIA--FRKFTSASDAWSYGIVMWEVM 215
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRLL-----------------DDFVNEVASISRTSHV 121
D K LT F +LG G FG V G+ D+F+ E + SH
Sbjct: 6 DPKDLT--FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 63
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L G C + +I E+M NG L ++ Q ++ E+ + + +E
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ-----QLLEMCKDVCEAME 118
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL S + LH D+ N L+++ K+SDFGL++ E +S +G++ + +
Sbjct: 119 YLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSP 173
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PEV + + S KSD+++FG+++ E+
Sbjct: 174 PEVLM--YSKFSSKSDIWAFGVLMWEI 198
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 75 YNFSDVKKLTNSFKDKL-GQGGFGGVYKGRL-----------------------LDDFVN 110
+ F+ TN DK+ G G FG V GRL DF+
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
E + + + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QLV 150
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 151 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G + I + +PE + + + + SDV+S+G+++ E++
Sbjct: 208 RGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRLL-----------------DDFVNEVASISRTSHV 121
D K LT F +LG G FG V G+ D+F+ E + SH
Sbjct: 2 DPKDLT--FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 59
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L G C + +I E+M NG L ++ Q ++ E+ + + +E
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ-----QLLEMCKDVCEAME 114
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL S + LH D+ N L+++ K+SDFGL++ E +S +G++ + +
Sbjct: 115 YLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSP 169
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PEV + + S KSD+++FG+++ E+
Sbjct: 170 PEVLM--YSKFSSKSDIWAFGVLMWEI 194
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 75 YNFSDVKKLTNSFKDKL-GQGGFGGVYKGRL-----------------------LDDFVN 110
+ F+ TN DK+ G G FG V GRL DF+
Sbjct: 24 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 83
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
E + + + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QLV 138
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 139 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 195
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G + I + +PE + + + + SDV+S+G+++ E++
Sbjct: 196 RGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 232
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 75 YNFSDVKKLTNSFKDKL-GQGGFGGVYKGRL-----------------------LDDFVN 110
+ F+ TN DK+ G G FG V GRL DF+
Sbjct: 34 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 93
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
E + + + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QLV 148
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 149 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 205
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G + I + +PE + + + + SDV+S+G+++ E++
Sbjct: 206 RGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 242
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRLL-----------------DDFVNEVASISRTSHV 121
D K LT F +LG G FG V G+ D+F+ E + SH
Sbjct: 7 DPKDLT--FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 64
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L G C + +I E+M NG L ++ Q ++ E+ + + +E
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ-----QLLEMCKDVCEAME 119
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL S + LH D+ N L+++ K+SDFGL++ E +S +G++ + +
Sbjct: 120 YLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSP 174
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PEV + + S KSD+++FG+++ E+
Sbjct: 175 PEVLM--YSKFSSKSDIWAFGVLMWEI 199
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 75 YNFSDVKKLTNSFKDKL-GQGGFGGVYKGRL-----------------------LDDFVN 110
+ F+ TN DK+ G G FG V GRL DF+
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
E + + + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QLV 150
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 151 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G + I + +PE + + + + SDV+S+G+++ E++
Sbjct: 208 RGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 75 YNFSDVKKLTNSFKDKL-GQGGFGGVYKGRL-----------------------LDDFVN 110
+ F+ TN DK+ G G FG V GRL DF+
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
E + + + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QLV 150
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 151 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G + I + +PE + + + + SDV+S+G+++ E++
Sbjct: 208 RGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 31/207 (14%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRLL-----------------DDFVNEVASISRTSHV 121
D K LT F +LG G FG V G+ D+F+ E + SH
Sbjct: 22 DPKDLT--FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 79
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L G C + +I E+M NG L ++ + + +++ E+ + + +E
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-----REMRHRFQTQQLLEMCKDVCEAME 134
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL S + LH D+ N L+++ K+SDFGL++ E +S +G++ + +
Sbjct: 135 YLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSP 189
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PEV + + S KSD+++FG+++ E+
Sbjct: 190 PEVLM--YSKFSSKSDIWAFGVLMWEI 214
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 75 YNFSDVKKLTNSFKDKL-GQGGFGGVYKGRL-----------------------LDDFVN 110
+ F+ TN DK+ G G FG V GRL DF+
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
E + + + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QLV 150
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 151 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G + I + +PE + + + + SDV+S+G+++ E++
Sbjct: 208 RGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 75 YNFSDVKKLTNSFKDKL-GQGGFGGVYKGRL-----------------------LDDFVN 110
+ F+ TN DK+ G G FG V GRL DF+
Sbjct: 7 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 66
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
E + + + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QLV 121
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 122 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G + I + +PE + + + + SDV+S+G+++ E++
Sbjct: 179 RGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 215
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 122/274 (44%), Gaps = 53/274 (19%)
Query: 87 FKDKLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGF 129
+ KLG G FG V+ ++ F+ E + H +V L
Sbjct: 186 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 130 CLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCST 189
+ +I EFM GSL F+ + + SK Q L K+ + IA+G+ ++
Sbjct: 246 VTK-EPIYIITEFMAKGSLLDFLKSDEGSK--QPL--PKLIDFSAQIAEGMAFIEQ---R 297
Query: 190 KILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNF 249
+H D++ NIL+ KI+DFGLA++ GA+ I + APE NF
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGLARV------------GAKFPIKWTAPEAI--NF 343
Query: 250 GEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTR 309
G + KSDV+SFG+++ME+V G+ + + R +E R +++P R
Sbjct: 344 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-------VIRALE--RGYRMP----R 390
Query: 310 KENEIAKKMIIVGLWCIQARPSDRPPMNEVIEML 343
EN +++ + + C + RP +RP + +L
Sbjct: 391 PEN-CPEELYNIMMRCWKNRPEERPTFEYIQSVL 423
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRLL-----------------DDFVNEVASISRTSHV 121
D K LT F +LG G FG V G+ D+F+ E + SH
Sbjct: 13 DPKDLT--FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 70
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L G C + +I E+M NG L ++ Q ++ E+ + + +E
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ-----QLLEMCKDVCEAME 125
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL S + LH D+ N L+++ K+SDFGL++ E +S +G++ + +
Sbjct: 126 YLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSP 180
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PEV + + S KSD+++FG+++ E+
Sbjct: 181 PEVLM--YSKFSSKSDIWAFGVLMWEI 205
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 31/207 (14%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRLL-----------------DDFVNEVASISRTSHV 121
D K LT F +LG G FG V G+ D+F+ E + SH
Sbjct: 22 DPKDLT--FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 79
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L G C + +I E+M NG L ++ + + +++ E+ + + +E
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-----REMRHRFQTQQLLEMCKDVCEAME 134
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL S + LH D+ N L+++ K+SDFGL++ E +S +G++ + +
Sbjct: 135 YLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE--TSSVGSKFPVRWSP 189
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PEV + + S KSD+++FG+++ E+
Sbjct: 190 PEVLM--YSKFSSKSDIWAFGVLMWEI 214
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 88/174 (50%), Gaps = 12/174 (6%)
Query: 98 GVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDT 157
G Y R +F++E + + + H N++ L G ++ EFM NG+L+ F+ D
Sbjct: 54 GGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG 113
Query: 158 SKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLA 217
++ ++ GIA G+ YL +H D+ NIL++ + K+SDFGL+
Sbjct: 114 QFTVI-----QLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLS 165
Query: 218 KLC--TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + + +S LG + I + APE + F + + SD +S+G+++ E++
Sbjct: 166 RFLEENSSDPTETSSLGGKIPIRWTAPEAIA--FRKFTSASDAWSYGIVMWEVM 217
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 57/288 (19%)
Query: 90 KLGQGGFGGVYKGRLLD-------------------------DFVNEVASISRTSHVNVV 124
+LGQG FG VY+G D +F+NE + + + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 125 TLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQYLRWEKMYEIVIGIAK 178
LLG +G ++ E M +G L+ ++ + + +P L ++M ++ IA
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIAD 141
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI-- 236
G+ YL+ + K +H D+ N ++ DF KI DFG+ + + G +G+
Sbjct: 142 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK---GGKGLLP 195
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
+ ++APE S G + SD++SFG+++ E+ G+ + E
Sbjct: 196 VRWMAPE--SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------------E 239
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
Q +F + G + + +++ + C Q P RP E++ +L+
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 34/219 (15%)
Query: 75 YNFSDVKKLTNSFKDKL-GQGGFGGVYKGRL-----------------------LDDFVN 110
+ F+ TN DK+ G G FG V GRL DF+
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
E + + + H N++ L G + ++ E+M NGSL+ F+ D ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-----QLV 150
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
++ GIA G++YL +H D+ NIL++ + K+SDFGL ++ +
Sbjct: 151 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT 207
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G + I + +PE + + + + SDV+S+G+++ E++
Sbjct: 208 RGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 97/226 (42%), Gaps = 35/226 (15%)
Query: 68 GPLPLKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRL----------------------- 104
G +P +N + ++ F +LG+G FG V R
Sbjct: 13 GLVPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 72
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQ 162
L DF E+ + H N+V G C R LI E++P GSL ++ K +
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKE 127
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTT 222
+ K+ + I KG+EYL + + +H D+ NIL++ + KI DFGL K+
Sbjct: 128 RIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
Query: 223 KEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMEL 268
+ I + APE + + + S SDV+SFG+++ EL
Sbjct: 185 DKEXXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 228
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 97/226 (42%), Gaps = 35/226 (15%)
Query: 68 GPLPLKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRL----------------------- 104
G +P +N + ++ F +LG+G FG V R
Sbjct: 13 GLVPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 72
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQ 162
L DF E+ + H N+V G C R LI E++P GSL ++ K +
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKE 127
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTT 222
+ K+ + I KG+EYL + + +H D+ NIL++ + KI DFGL K+
Sbjct: 128 RIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
Query: 223 KEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMEL 268
+ I + APE + + + S SDV+SFG+++ EL
Sbjct: 185 DKEXXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 228
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 120 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNG------------DTSKPCQYLRW 166
H+NVV LLG C + G +I EF G+L ++ + D K +L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DFLTL 138
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
E + +AKG+E+L S K +H D+ NILL E KI DFGLA+
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 227 VSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
V AR + ++APE +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 196 VRK-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE- 250
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQG 345
R +++ + P T +M L C PS RP +E++E L
Sbjct: 251 -----FCRRLKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLGN 298
Query: 346 STEA 349
+A
Sbjct: 299 LLQA 302
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 125/304 (41%), Gaps = 59/304 (19%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKG------------RLLDDFVNEVASI-SRTSHVN--- 122
+V + + +LGQG FG VY+G R+ VNE AS+ R +N
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 123 ---------VVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRW 166
VV LLG +G +I E M G L+ ++ N P
Sbjct: 66 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL--- 122
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
KM ++ IA G+ YL+ + K +H D+ N ++ EDF KI DFG+ + +
Sbjct: 123 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 227 VSSLLGARGI--IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
G +G+ + +++PE S G + SDV+SFG+++ E+ G+ +
Sbjct: 180 RK---GGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--- 231
Query: 285 VYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
EQ F + G + K + ++ + C Q P RP E+I ++
Sbjct: 232 -----------EQVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 280
Query: 345 GSTE 348
E
Sbjct: 281 EEME 284
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 120 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNG------------DTSKPCQYLRW 166
H+NVV LLG C + G +I EF G+L ++ + D K +L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DFLTL 138
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
E + +AKG+E+L S K +H D+ NILL E KI DFGLA+
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 227 VSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
V AR + ++APE +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 196 VRK-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE- 250
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQG 345
R +++ + P T +M L C PS RP +E++E L
Sbjct: 251 -----FCRRLKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLGN 298
Query: 346 STEA 349
+A
Sbjct: 299 LLQA 302
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 120 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNG------------DTSKPCQYLRW 166
H+NVV LLG C + G +I EF G+L ++ + D K +L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DFLTL 147
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
E + +AKG+E+L S K +H D+ NILL E KI DFGLA+
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 227 VSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
V AR + ++APE +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 205 VRK-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE- 259
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQG 345
R +++ + P T +M L C PS RP +E++E L
Sbjct: 260 -----FCRRLKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307
Query: 346 STEA 349
+A
Sbjct: 308 LLQA 311
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 23/178 (12%)
Query: 108 FVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWE 167
F+ EV + H NV+ +G + I E++ G+L + + D+ P W
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP-----WS 108
Query: 168 KMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC----TTK 223
+ IA G+ YLH S I+H D+ HN L+ E+ ++DFGLA+L T
Sbjct: 109 QRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165
Query: 224 EGIVSSLLGAR----GIIG---YIAPEVFS-RNFGEVSHKSDVYSFGMMIMELVGCKN 273
EG+ S R ++G ++APE+ + R++ E K DV+SFG+++ E++G N
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDE---KVDVFSFGIVLCEIIGRVN 220
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 118/276 (42%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 136
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFG AKL +E + G + I ++A E +
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWMALESI 193
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 194 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 243
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+ W I A RP E+I
Sbjct: 244 PICT-----IDVYMIMRKCWMIDA--DSRPKFRELI 272
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 49/289 (16%)
Query: 91 LGQGGFGGVYKGRL------------------------LDDFVNEVASISRTSHVNVVTL 126
LG+G FG V +G L +++F++E A + SH NV+ L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 127 LGFCLEGNNRAL-----IYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
LG C+E +++ + I FM G L ++ +++ + + + ++ IA G+E
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL + LH D+ N +L +D ++DFGL+K + + + A+ + +IA
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRI-AKMPVKWIA 217
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
E + + KSDV++FG+ + E+ GV + H +Y ++
Sbjct: 218 IESLADRV--YTSKSDVWAFGVTMWEIATRGMTPYPGVQN-------HEMYDYLLHGHRL 268
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGSTEAL 350
K P + EI C + P DRP + + L+ E+L
Sbjct: 269 KQPEDCLDELYEIMYS-------CWRTDPLDRPTFSVLRLQLEKLLESL 310
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRLL-----------------DDFVNEVASISRTSHV 121
D K LT F +LG G FG V G+ D+F+ E + SH
Sbjct: 7 DPKDLT--FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 64
Query: 122 NVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+V L G C + +I E+M NG L ++ Q ++ E+ + + +E
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ-----QLLEMCKDVCEAME 119
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL S + LH D+ N L+++ K+SDFGL++ E +S G++ + +
Sbjct: 120 YLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSRGSKFPVRWSP 174
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PEV + + S KSD+++FG+++ E+
Sbjct: 175 PEVLM--YSKFSSKSDIWAFGVLMWEI 199
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 118/276 (42%), Gaps = 54/276 (19%)
Query: 91 LGQGGFGGVYKGRLL------------------------DDFVNEVASISRTSHVNVVTL 126
LG G FG VYKG + + ++E ++ + +V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL-RWEKMYEIVIGIAKGLEYLHH 185
LG CL + LI + MP G L +V + QYL W + IAKG+ YL
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 136
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFG AKL +E + G + I ++A E +
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWMALESI 193
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R + +H+SDV+S+G+ + EL+ + G+ +S I +E+ P
Sbjct: 194 LHRIY---THQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERLPQP 243
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+ T I MI+ W I A RP E+I
Sbjct: 244 PICT-----IDVYMIMRKCWMIDA--DSRPKFRELI 272
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 124/288 (43%), Gaps = 57/288 (19%)
Query: 90 KLGQGGFGGVYKGRLLD-------------------------DFVNEVASISRTSHVNVV 124
+LGQG FG VY+G D +F+NE + + + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 125 TLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQYLRWEKMYEIVIGIAK 178
LLG +G ++ E M +G L+ ++ + + +P L ++M ++ IA
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIAD 141
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI-- 236
G+ YL+ + K +H D+ N ++ DF KI DFG+ + G +G+
Sbjct: 142 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE---TAYYRKGGKGLLP 195
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
+ ++APE S G + SD++SFG+++ E+ G+ + E
Sbjct: 196 VRWMAPE--SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------------E 239
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
Q +F + G + + +++ + C Q P RP E++ +L+
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 57/288 (19%)
Query: 90 KLGQGGFGGVYKGRLLD-------------------------DFVNEVASISRTSHVNVV 124
+LGQG FG VY+G D +F+NE + + + +VV
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 125 TLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQYLRWEKMYEIVIGIAK 178
LLG +G ++ E M +G L+ ++ + + +P L ++M ++ IA
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIAD 140
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI-- 236
G+ YL+ + K +H D+ N ++ DF KI DFG+ + + G +G+
Sbjct: 141 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK---GGKGLLP 194
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
+ ++APE S G + SD++SFG+++ E+ G+ + E
Sbjct: 195 VRWMAPE--SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------------E 238
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
Q +F + G + + +++ + C Q P RP E++ +L+
Sbjct: 239 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 120 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNG------------DTSKPCQYLRW 166
H+NVV LLG C + G +I EF G+L ++ + D K +L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DFLTL 147
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
E + +AKG+E+L S K +H D+ NILL E KI DFGLA+
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDX 204
Query: 227 VSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
V AR + ++APE +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 205 VRK-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE- 259
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQG 345
R +++ + P T +M L C PS RP +E++E L
Sbjct: 260 -----FCRRLKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307
Query: 346 STEA 349
+A
Sbjct: 308 LLQA 311
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 120 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNG------------DTSKPCQYLRW 166
H+NVV LLG C + G +I EF G+L ++ + D K +L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DFLTL 147
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
E + +AKG+E+L S K +H D+ NILL E KI DFGLA+
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 204
Query: 227 VSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
V AR + ++APE +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 205 VRK-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE- 259
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQG 345
R +++ + P T +M L C PS RP +E++E L
Sbjct: 260 -----FCRRLKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307
Query: 346 STEA 349
+A
Sbjct: 308 LLQA 311
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 120 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNG------------DTSKPCQYLRW 166
H+NVV LLG C + G +I EF G+L ++ + D K +L
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYK--DFLTL 149
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
E + +AKG+E+L S K +H D+ NILL E KI DFGLA+
Sbjct: 150 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 206
Query: 227 VSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
V AR + ++APE +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 207 VRK-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE- 261
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQG 345
R +++ + P T +M L C PS RP +E++E L
Sbjct: 262 -----FCRRLKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLGN 309
Query: 346 STEA 349
+A
Sbjct: 310 LLQA 313
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 120 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNG------------DTSKPCQYLRW 166
H+NVV LLG C + G +I EF G+L ++ + D K +L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DFLTL 138
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
E + +AKG+E+L S K +H D+ NILL E KI DFGLA+
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 227 VSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
V AR + ++APE +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 196 VRK-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE- 250
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQG 345
R +++ + P T +M L C PS RP +E++E L
Sbjct: 251 -----FCRRLKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLGN 298
Query: 346 STEA 349
+A
Sbjct: 299 LLQA 302
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 120 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNG------------DTSKPCQYLRW 166
H+NVV LLG C + G +I EF G+L ++ + D K +L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DFLTL 138
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
E + +AKG+E+L S K +H D+ NILL E KI DFGLA+
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 227 VSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
V AR + ++APE +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 196 VRK-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE- 250
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQG 345
R +++ + P T +M L C PS RP +E++E L
Sbjct: 251 -----FCRRLKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLGN 298
Query: 346 STEA 349
+A
Sbjct: 299 LLQA 302
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 120 HVNVVTLLGFCLE-GNNRALIYEFMPNGSLEKFVYNG------------DTSKPCQYLRW 166
H+NVV LLG C + G +I EF G+L ++ + D K +L
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DFLTL 184
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
E + +AKG+E+L S K +H D+ NILL E KI DFGLA+
Sbjct: 185 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 241
Query: 227 VSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
V AR + ++APE +F R + + +SDV+SFG+++ E+ + GV E
Sbjct: 242 VRK-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE- 296
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQG 345
R +++ + P T +M L C PS RP +E++E L
Sbjct: 297 -----FCRRLKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLGN 344
Query: 346 STEA 349
+A
Sbjct: 345 LLQA 348
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 34/219 (15%)
Query: 75 YNFSDVKKLTNSFKDKL-GQGGFGGVYKGRL-----------------------LDDFVN 110
+ F+ TN DK+ G G FG V GRL DF+
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
E + + + H N++ L G + ++ E M NGSL+ F+ D ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI-----QLV 150
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 151 GMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G + I + +PE + + + + SDV+S+G+++ E++
Sbjct: 208 RGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 59/304 (19%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKG------------RLLDDFVNEVASI-SRTSHVN--- 122
+V + + +LGQG FG VY+G R+ VNE AS+ R +N
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 123 ---------VVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRW 166
VV LLG +G +I E M G L+ ++ N P
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL--- 131
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
KM ++ IA G+ YL+ + K +H D+ N ++ EDF KI DFG+ + +
Sbjct: 132 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 188
Query: 227 VSSLLGARGI--IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
G +G+ + +++PE S G + SDV+SFG+++ E+ G+ +
Sbjct: 189 RK---GGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--- 240
Query: 285 VYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
EQ F + G + K + + + C Q P RP E+I ++
Sbjct: 241 -----------EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
Query: 345 GSTE 348
E
Sbjct: 290 EEME 293
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 34/219 (15%)
Query: 75 YNFSDVKKLTNSFKDKL-GQGGFGGVYKGRL-----------------------LDDFVN 110
+ F+ TN DK+ G G FG V GRL DF+
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
E + + + H N++ L G + ++ E M NGSL+ F+ D ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI-----QLV 150
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 151 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G + I + +PE + + + + SDV+S+G+++ E++
Sbjct: 208 RGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 34/219 (15%)
Query: 75 YNFSDVKKLTNSFKDKL-GQGGFGGVYKGRL-----------------------LDDFVN 110
+ F+ TN DK+ G G FG V GRL DF+
Sbjct: 7 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 66
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
E + + + H N++ L G + ++ E M NGSL+ F+ D ++
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI-----QLV 121
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
++ GIA G++YL +H D+ NIL++ + K+SDFGL+++ +
Sbjct: 122 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G + I + +PE + + + + SDV+S+G+++ E++
Sbjct: 179 RGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 215
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 126/288 (43%), Gaps = 57/288 (19%)
Query: 90 KLGQGGFGGVYKGRLLD-------------------------DFVNEVASISRTSHVNVV 124
+LGQG FG VY+G D +F+NE + + + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 125 TLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQYLRWEKMYEIVIGIAK 178
LLG +G ++ E M +G L+ ++ + + +P L ++M ++ IA
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIAD 141
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI-- 236
G+ YL+ + K +H ++ N ++ DF KI DFG+ + + G +G+
Sbjct: 142 GMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK---GGKGLLP 195
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
+ ++APE S G + SD++SFG+++ E+ G+ + E
Sbjct: 196 VRWMAPE--SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------------E 239
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
Q +F + G + + +++ + C Q P+ RP E++ +L+
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 29/197 (14%)
Query: 90 KLGQGGFGGVYKGRL-----------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
+LG G FG V+ G + F+ E + + H +V L E
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
++ E+M GSL F+ +G+ + L+ + ++ +A G+ Y+ +
Sbjct: 76 -EPIYIVTEYMNKGSLLDFLKDGEG----RALKLPNLVDMAAQVAAGMAYIER---MNYI 127
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D++ NIL+ KI+DFGLA+L E ++ GA+ I + APE + +G
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNE--XTARQGAKFPIKWTAPE--AALYGRF 183
Query: 253 SHKSDVYSFGMMIMELV 269
+ KSDV+SFG+++ ELV
Sbjct: 184 TIKSDVWSFGILLTELV 200
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 59/304 (19%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKG------------RLLDDFVNEVASI-SRTSHVN--- 122
+V + + +LGQG FG VY+G R+ VNE AS+ R +N
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 123 ---------VVTLLGFCLEGNNRALIYEFMPNGSLEKFV-------YNGDTSKPCQYLRW 166
VV LLG +G +I E M G L+ ++ N P
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL--- 137
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
KM ++ IA G+ YL+ + K +H D+ N ++ EDF KI DFG+ + +
Sbjct: 138 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 227 VSSLLGARGI--IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
G +G+ + +++PE S G + SDV+SFG+++ E+ G+ +
Sbjct: 195 RK---GGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--- 246
Query: 285 VYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
EQ F + G + K + + + C Q P RP E+I ++
Sbjct: 247 -----------EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
Query: 345 GSTE 348
E
Sbjct: 296 EEME 299
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 126/288 (43%), Gaps = 57/288 (19%)
Query: 90 KLGQGGFGGVYKGRLLD-------------------------DFVNEVASISRTSHVNVV 124
+LGQG FG VY+G D +F+NE + + + +VV
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 125 TLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQYLRWEKMYEIVIGIAK 178
LLG +G ++ E M +G L+ ++ + + +P L ++M ++ IA
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIAD 142
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI-- 236
G+ YL+ + K +H ++ N ++ DF KI DFG+ + + G +G+
Sbjct: 143 GMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK---GGKGLLP 196
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
+ ++APE S G + SD++SFG+++ E+ G+ + E
Sbjct: 197 VRWMAPE--SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------------E 240
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
Q +F + G + + +++ + C Q P+ RP E++ +L+
Sbjct: 241 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 12/170 (7%)
Query: 102 GRLLDDFVNEVASISRTSHVNVVTLLGFCLE--GNNRALIYEFMPNGSLEKFVYNGDTSK 159
G + D E+ + H N+V G C E GN LI EF+P+GSL++++ K
Sbjct: 64 GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-----PK 118
Query: 160 PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL 219
+ ++ + + I KG++YL S + +H D+ N+L++ + KI DFGL K
Sbjct: 119 NKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 175
Query: 220 CTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
T + + + + APE ++ ++ SDV+SFG+ + EL+
Sbjct: 176 IETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIA--SDVWSFGVTLHELL 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 12/170 (7%)
Query: 102 GRLLDDFVNEVASISRTSHVNVVTLLGFCLE--GNNRALIYEFMPNGSLEKFVYNGDTSK 159
G + D E+ + H N+V G C E GN LI EF+P+GSL++++ K
Sbjct: 52 GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-----PK 106
Query: 160 PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL 219
+ ++ + + I KG++YL S + +H D+ N+L++ + KI DFGL K
Sbjct: 107 NKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 163
Query: 220 CTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
T + + + + APE ++ ++ SDV+SFG+ + EL+
Sbjct: 164 IETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIA--SDVWSFGVTLHELL 211
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 59/304 (19%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKG------------RLLDDFVNEVASI-SRTSHVN--- 122
+V + + +LGQG FG VY+G R+ VNE AS+ R +N
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 123 ---------VVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRW 166
VV LLG +G +I E M G L+ ++ N P
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL--- 137
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
KM ++ IA G+ YL+ + K +H D+ N ++ EDF KI DFG+ + +
Sbjct: 138 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 227 VSSLLGARGI--IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
G +G+ + +++PE S G + SDV+SFG+++ E+ G+ +
Sbjct: 195 RK---GGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--- 246
Query: 285 VYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
EQ F + G + K + + + C Q P RP E+I ++
Sbjct: 247 -----------EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
Query: 345 GSTE 348
E
Sbjct: 296 EEME 299
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 35/207 (16%)
Query: 87 FKDKLGQGGFGGVYKGRL-----------------------LDDFVNEVASISRTSHVNV 123
F +LG+G FG V R L DF E+ + H N+
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 124 VTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
V G C R LI EF+P GSL +++ K + + K+ + I KG+E
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYL-----QKHKERIDHIKLLQYTSQICKGME 131
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL + + +H D+ NIL++ + KI DFGL K+ + I + A
Sbjct: 132 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PE + + + S SDV+SFG+++ EL
Sbjct: 189 PESLTES--KFSVASDVWSFGVVLYEL 213
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 59/304 (19%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKG------------RLLDDFVNEVASI-SRTSHVN--- 122
+V + + +LGQG FG VY+G R+ VNE AS+ R +N
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 70
Query: 123 ---------VVTLLGFCLEGNNRALIYEFMPNGSLEKFV-------YNGDTSKPCQYLRW 166
VV LLG +G +I E M G L+ ++ N P
Sbjct: 71 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL--- 127
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
KM ++ IA G+ YL+ + K +H D+ N ++ EDF KI DFG+ + +
Sbjct: 128 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 184
Query: 227 VSSLLGARGI--IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
G +G+ + +++PE S G + SDV+SFG+++ E+ G+ +
Sbjct: 185 RK---GGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--- 236
Query: 285 VYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
EQ F + G + K + + + C Q P RP E+I ++
Sbjct: 237 -----------EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 285
Query: 345 GSTE 348
E
Sbjct: 286 EEME 289
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 59/304 (19%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKG------------RLLDDFVNEVASI-SRTSHVN--- 122
+V + + +LGQG FG VY+G R+ VNE AS+ R +N
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 102
Query: 123 ---------VVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRW 166
VV LLG +G +I E M G L+ ++ N P
Sbjct: 103 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL--- 159
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
KM ++ IA G+ YL+ + K +H D+ N ++ EDF KI DFG+ + +
Sbjct: 160 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 216
Query: 227 VSSLLGARGI--IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
G +G+ + +++PE S G + SDV+SFG+++ E+ G+ +
Sbjct: 217 RK---GGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--- 268
Query: 285 VYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
EQ F + G + K + + + C Q P RP E+I ++
Sbjct: 269 -----------EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 317
Query: 345 GSTE 348
E
Sbjct: 318 EEME 321
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 59/304 (19%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKG------------RLLDDFVNEVASI-SRTSHVN--- 122
+V + + +LGQG FG VY+G R+ VNE AS+ R +N
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 123 ---------VVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRW 166
VV LLG +G +I E M G L+ ++ N P
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL--- 130
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
KM ++ IA G+ YL+ + K +H D+ N ++ EDF KI DFG+ + +
Sbjct: 131 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 227 VSSLLGARGI--IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
G +G+ + +++PE S G + SDV+SFG+++ E+ G+ +
Sbjct: 188 RK---GGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--- 239
Query: 285 VYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
EQ F + G + K + + + C Q P RP E+I ++
Sbjct: 240 -----------EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
Query: 345 GSTE 348
E
Sbjct: 289 EEME 292
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 59/304 (19%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKG------------RLLDDFVNEVASI-SRTSHVN--- 122
+V + + +LGQG FG VY+G R+ VNE AS+ R +N
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 123 ---------VVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRW 166
VV LLG +G +I E M G L+ ++ N P
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL--- 130
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
KM ++ IA G+ YL+ + K +H D+ N ++ EDF KI DFG+ + +
Sbjct: 131 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 227 VSSLLGARGI--IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
G +G+ + +++PE S G + SDV+SFG+++ E+ G+ +
Sbjct: 188 RK---GGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--- 239
Query: 285 VYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
EQ F + G + K + + + C Q P RP E+I ++
Sbjct: 240 -----------EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
Query: 345 GSTE 348
E
Sbjct: 289 EEME 292
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 59/304 (19%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKG------------RLLDDFVNEVASI-SRTSHVN--- 122
+V + + +LGQG FG VY+G R+ VNE AS+ R +N
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 71
Query: 123 ---------VVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRW 166
VV LLG +G +I E M G L+ ++ N P
Sbjct: 72 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL--- 128
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
KM ++ IA G+ YL+ + K +H D+ N ++ EDF KI DFG+ + +
Sbjct: 129 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 185
Query: 227 VSSLLGARGI--IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
G +G+ + +++PE S G + SDV+SFG+++ E+ G+ +
Sbjct: 186 RK---GGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--- 237
Query: 285 VYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
EQ F + G + K + + + C Q P RP E+I ++
Sbjct: 238 -----------EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 286
Query: 345 GSTE 348
E
Sbjct: 287 EEME 290
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 59/304 (19%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKG------------RLLDDFVNEVASI-SRTSHVN--- 122
+V + + +LGQG FG VY+G R+ VNE AS+ R +N
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 123 ---------VVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRW 166
VV LLG +G +I E M G L+ ++ N P
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL--- 131
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
KM ++ IA G+ YL+ + K +H D+ N ++ EDF KI DFG+ + +
Sbjct: 132 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 188
Query: 227 VSSLLGARGI--IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
G +G+ + +++PE S G + SDV+SFG+++ E+ G+ +
Sbjct: 189 RK---GGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--- 240
Query: 285 VYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
EQ F + G + K + + + C Q P RP E+I ++
Sbjct: 241 -----------EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
Query: 345 GSTE 348
E
Sbjct: 290 EEME 293
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 59/304 (19%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKG------------RLLDDFVNEVASI-SRTSHVN--- 122
+V + + +LGQG FG VY+G R+ VNE AS+ R +N
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 123 ---------VVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRW 166
VV LLG +G +I E M G L+ ++ N P
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL--- 124
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
KM ++ IA G+ YL+ + K +H D+ N ++ EDF KI DFG+ + +
Sbjct: 125 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 227 VSSLLGARGI--IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
G +G+ + +++PE S G + SDV+SFG+++ E+ G+ +
Sbjct: 182 RK---GGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--- 233
Query: 285 VYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
EQ F + G + K + + + C Q P RP E+I ++
Sbjct: 234 -----------EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 282
Query: 345 GSTE 348
E
Sbjct: 283 EEME 286
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 37/205 (18%)
Query: 91 LGQGGFGGVYKGRLLDDFVNEVA----SISRTS-------------------HVNVVTLL 127
+G+G FG VY G +D N + S+SR + H NV+ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 128 GFCL--EGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
G L EG L+ +M +G L +F+ + + + + + +A+G+EYL
Sbjct: 89 GIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVK-----DLISFGLQVARGMEYL-- 140
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI-VSSLLGARGIIGYIAPEV 244
K +H D+ N +LDE F K++DFGLA+ +E V AR + + A E
Sbjct: 141 -AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE- 198
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELV 269
S + KSDV+SFG+++ EL+
Sbjct: 199 -SLQTYRFTTKSDVWSFGVLLWELL 222
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 59/304 (19%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKG------------RLLDDFVNEVASI-SRTSHVN--- 122
+V + + +LGQG FG VY+G R+ VNE AS+ R +N
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 123 ---------VVTLLGFCLEGNNRALIYEFMPNGSLEKFVY-------NGDTSKPCQYLRW 166
VV LLG +G +I E M G L+ ++ N P
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL--- 124
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
KM ++ IA G+ YL+ + K +H D+ N + EDF KI DFG+ + +
Sbjct: 125 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 227 VSSLLGARGI--IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
G +G+ + +++PE S G + SDV+SFG+++ E+ G+ +
Sbjct: 182 RK---GGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--- 233
Query: 285 VYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
EQ F + G + K + ++ + C Q P RP E+I ++
Sbjct: 234 -----------EQVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 282
Query: 345 GSTE 348
E
Sbjct: 283 EEME 286
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 87 FKDKLGQGGFGGVYKGRL-----------------------LDDFVNEVASISRTSHVNV 123
F +LG+G FG V R L DF E+ + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 124 VTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
V G C R LI E++P GSL ++ K + + K+ + I KG+E
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGME 128
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL + + +H D+ NIL++ + KI DFGL K+ + I + A
Sbjct: 129 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA 185
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PE + + + S SDV+SFG+++ EL
Sbjct: 186 PESLTES--KFSVASDVWSFGVVLYEL 210
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 81 KKLTNSFKDKLGQGGFGGVYKG-----------------------RLLDDFVNEVASISR 117
+KL +LG G FG V KG L D+ + E + +
Sbjct: 25 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 84
Query: 118 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 177
+ +V ++G C E + L+ E G L K++ + ++++ + + E+V ++
Sbjct: 85 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 137
Query: 178 KGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
G++YL + +H D+ N+LL KISDFGL+K E + + +
Sbjct: 138 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIME 267
+ APE N+ + S KSDV+SFG+++ E
Sbjct: 195 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 81 KKLTNSFKDKLGQGGFGGVYKG-----------------------RLLDDFVNEVASISR 117
+KL +LG G FG V KG L D+ + E + +
Sbjct: 25 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 84
Query: 118 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 177
+ +V ++G C E + L+ E G L K++ + ++++ + + E+V ++
Sbjct: 85 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 137
Query: 178 KGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
G++YL + +H D+ N+LL KISDFGL+K E + + +
Sbjct: 138 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIME 267
+ APE N+ + S KSDV+SFG+++ E
Sbjct: 195 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 81 KKLTNSFKDKLGQGGFGGVYKG-----------------------RLLDDFVNEVASISR 117
+KL +LG G FG V KG L D+ + E + +
Sbjct: 23 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 82
Query: 118 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 177
+ +V ++G C E + L+ E G L K++ + ++++ + + E+V ++
Sbjct: 83 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 135
Query: 178 KGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
G++YL + +H D+ N+LL KISDFGL+K E + + +
Sbjct: 136 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 192
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIME 267
+ APE N+ + S KSDV+SFG+++ E
Sbjct: 193 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 220
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 81 KKLTNSFKDKLGQGGFGGVYKG-----------------------RLLDDFVNEVASISR 117
+KL +LG G FG V KG L D+ + E + +
Sbjct: 367 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 426
Query: 118 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 177
+ +V ++G C E + L+ E G L K++ + ++++ + + E+V ++
Sbjct: 427 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 479
Query: 178 KGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
G++YL + +H D+ N+LL KISDFGL+K E + + +
Sbjct: 480 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 536
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIME 267
+ APE N+ + S KSDV+SFG+++ E
Sbjct: 537 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 564
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 87 FKDKLGQGGFGGVYKGRL-----------------------LDDFVNEVASISRTSHVNV 123
F +LG+G FG V R L DF E+ + H N+
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 124 VTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
V G C R LI E++P GSL ++ K + + K+ + I KG+E
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGME 132
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL + + +H D+ NIL++ + KI DFGL K+ + I + A
Sbjct: 133 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 189
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PE + + + S SDV+SFG+++ EL
Sbjct: 190 PESLTES--KFSVASDVWSFGVVLYEL 214
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 87 FKDKLGQGGFGGVYKGRL-----------------------LDDFVNEVASISRTSHVNV 123
F +LG+G FG V R L DF E+ + H N+
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 124 VTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
V G C R LI E++P GSL ++ K + + K+ + I KG+E
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGME 127
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL + + +H D+ NIL++ + KI DFGL K+ + I + A
Sbjct: 128 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 184
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PE + + + S SDV+SFG+++ EL
Sbjct: 185 PESLTES--KFSVASDVWSFGVVLYEL 209
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 87 FKDKLGQGGFGGVYKGRL-----------------------LDDFVNEVASISRTSHVNV 123
F +LG+G FG V R L DF E+ + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 124 VTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
V G C R LI E++P GSL ++ K + + K+ + I KG+E
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGME 128
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL + + +H D+ NIL++ + KI DFGL K+ + I + A
Sbjct: 129 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PE + + + S SDV+SFG+++ EL
Sbjct: 186 PESLTES--KFSVASDVWSFGVVLYEL 210
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 81 KKLTNSFKDKLGQGGFGGVYKG-----------------------RLLDDFVNEVASISR 117
+KL +LG G FG V KG L D+ + E + +
Sbjct: 368 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 427
Query: 118 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 177
+ +V ++G C E + L+ E G L K++ + ++++ + + E+V ++
Sbjct: 428 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 480
Query: 178 KGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
G++YL + +H D+ N+LL KISDFGL+K E + + +
Sbjct: 481 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 537
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIME 267
+ APE N+ + S KSDV+SFG+++ E
Sbjct: 538 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 565
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 87 FKDKLGQGGFGGVYKGRL-----------------------LDDFVNEVASISRTSHVNV 123
F +LG+G FG V R L DF E+ + H N+
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 124 VTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
V G C R LI E++P GSL ++ K + + K+ + I KG+E
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGME 126
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL + + +H D+ NIL++ + KI DFGL K+ + I + A
Sbjct: 127 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 183
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PE + + + S SDV+SFG+++ EL
Sbjct: 184 PESLTES--KFSVASDVWSFGVVLYEL 208
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 87 FKDKLGQGGFGGVYKGRL-----------------------LDDFVNEVASISRTSHVNV 123
F +LG+G FG V R L DF E+ + H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 124 VTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
V G C R LI E++P GSL ++ K + + K+ + I KG+E
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGME 131
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL + + +H D+ NIL++ + KI DFGL K+ + I + A
Sbjct: 132 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PE + + + S SDV+SFG+++ EL
Sbjct: 189 PESLTES--KFSVASDVWSFGVVLYEL 213
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 81 KKLTNSFKDKLGQGGFGGVYKG-----------------------RLLDDFVNEVASISR 117
+KL +LG G FG V KG L D+ + E + +
Sbjct: 9 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 68
Query: 118 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 177
+ +V ++G C E + L+ E G L K++ + ++++ + + E+V ++
Sbjct: 69 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 121
Query: 178 KGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
G++YL + +H D+ N+LL KISDFGL+K E + + +
Sbjct: 122 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPV 178
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIME 267
+ APE N+ + S KSDV+SFG+++ E
Sbjct: 179 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 206
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 81 KKLTNSFKDKLGQGGFGGVYKG-----------------------RLLDDFVNEVASISR 117
+KL +LG G FG V KG L D+ + E + +
Sbjct: 3 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 62
Query: 118 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 177
+ +V ++G C E + L+ E G L K++ + ++++ + + E+V ++
Sbjct: 63 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 115
Query: 178 KGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
G++YL + +H D+ N+LL KISDFGL+K E + + +
Sbjct: 116 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 172
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIME 267
+ APE N+ + S KSDV+SFG+++ E
Sbjct: 173 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 200
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 87 FKDKLGQGGFGGVYKGRL-----------------------LDDFVNEVASISRTSHVNV 123
F +LG+G FG V R L DF E+ + H N+
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 124 VTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
V G C R LI E++P GSL ++ K + + K+ + I KG+E
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGME 133
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL + + +H D+ NIL++ + KI DFGL K+ + I + A
Sbjct: 134 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 190
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PE + + + S SDV+SFG+++ EL
Sbjct: 191 PESLTES--KFSVASDVWSFGVVLYEL 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 87 FKDKLGQGGFGGVYKGRL-----------------------LDDFVNEVASISRTSHVNV 123
F +LG+G FG V R L DF E+ + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 124 VTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
V G C R LI E++P GSL ++ K + + K+ + I KG+E
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGME 128
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL + + +H D+ NIL++ + KI DFGL K+ + I + A
Sbjct: 129 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PE + + + S SDV+SFG+++ EL
Sbjct: 186 PESLTES--KFSVASDVWSFGVVLYEL 210
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 81 KKLTNSFKDKLGQGGFGGVYKG-----------------------RLLDDFVNEVASISR 117
+KL +LG G FG V KG L D+ + E + +
Sbjct: 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 74
Query: 118 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 177
+ +V ++G C E + L+ E G L K++ + ++++ + + E+V ++
Sbjct: 75 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 127
Query: 178 KGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
G++YL + +H D+ N+LL KISDFGL+K E + + +
Sbjct: 128 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 184
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIME 267
+ APE N+ + S KSDV+SFG+++ E
Sbjct: 185 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 87 FKDKLGQGGFGGVYKGRL-----------------------LDDFVNEVASISRTSHVNV 123
F +LG+G FG V R L DF E+ + H N+
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 124 VTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
V G C R LI E++P GSL ++ K + + K+ + I KG+E
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGME 134
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL + + +H D+ NIL++ + KI DFGL K+ + I + A
Sbjct: 135 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 191
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PE + + + S SDV+SFG+++ EL
Sbjct: 192 PESLTES--KFSVASDVWSFGVVLYEL 216
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 81 KKLTNSFKDKLGQGGFGGVYKG-----------------------RLLDDFVNEVASISR 117
+KL +LG G FG V KG L D+ + E + +
Sbjct: 5 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 64
Query: 118 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 177
+ +V ++G C E + L+ E G L K++ + ++++ + + E+V ++
Sbjct: 65 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 117
Query: 178 KGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
G++YL + +H D+ N+LL KISDFGL+K E + + +
Sbjct: 118 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 174
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIME 267
+ APE N+ + S KSDV+SFG+++ E
Sbjct: 175 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 202
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 87 FKDKLGQGGFGGVYKGRL-----------------------LDDFVNEVASISRTSHVNV 123
F +LG+G FG V R L DF E+ + H N+
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 124 VTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
V G C R LI E++P GSL ++ K + + K+ + I KG+E
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGME 159
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL + + +H D+ NIL++ + KI DFGL K+ + I + A
Sbjct: 160 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 216
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PE + + + S SDV+SFG+++ EL
Sbjct: 217 PESLTES--KFSVASDVWSFGVVLYEL 241
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 87 FKDKLGQGGFGGVYKGRL-----------------------LDDFVNEVASISRTSHVNV 123
F +LG+G FG V R L DF E+ + H N+
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 124 VTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
V G C R LI E++P GSL ++ K + + K+ + I KG+E
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGME 135
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL + + +H D+ NIL++ + KI DFGL K+ + I + A
Sbjct: 136 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 192
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PE + + + S SDV+SFG+++ EL
Sbjct: 193 PESLTES--KFSVASDVWSFGVVLYEL 217
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 81 KKLTNSFKDKLGQGGFGGVYKG-----------------------RLLDDFVNEVASISR 117
+KL +LG G FG V KG L D+ + E + +
Sbjct: 9 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 68
Query: 118 TSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA 177
+ +V ++G C E + L+ E G L K++ + ++++ + + E+V ++
Sbjct: 69 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 121
Query: 178 KGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
G++YL + +H D+ N+LL KISDFGL+K E + + +
Sbjct: 122 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 178
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIME 267
+ APE N+ + S KSDV+SFG+++ E
Sbjct: 179 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 206
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 88/207 (42%), Gaps = 35/207 (16%)
Query: 87 FKDKLGQGGFGGVYKGRL-----------------------LDDFVNEVASISRTSHVNV 123
F +LG+G FG V R L DF E+ + H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 124 VTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
V G C R LI E++P GSL ++ + + K+ + I KG+E
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QAHAERIDHIKLLQYTSQICKGME 131
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL + + +H D+ NIL++ + KI DFGL K+ + I + A
Sbjct: 132 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PE + + + S SDV+SFG+++ EL
Sbjct: 189 PESLTES--KFSVASDVWSFGVVLYEL 213
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 103/242 (42%), Gaps = 48/242 (19%)
Query: 63 FIRNYGPLPLKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRLL----------------- 105
I + LK + S V+ F ++LG+ FG VYKG L
Sbjct: 11 LINQHKQAKLKEISLSAVR-----FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK 65
Query: 106 --------DDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY---- 153
++F +E +R H NVV LLG + ++I+ + +G L +F+
Sbjct: 66 DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSP 125
Query: 154 ------NGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDF 207
D L +V IA G+EYL S ++H D+ N+L+ +
Sbjct: 126 HSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKL 182
Query: 208 CPKISDFGLAKLCTTKEGIVSSLLGARGI-IGYIAPEVFSRNFGEVSHKSDVYSFGMMIM 266
KISD GL + + LLG + I ++APE +G+ S SD++S+G+++
Sbjct: 183 NVKISDLGLFREVYAAD--YYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLW 238
Query: 267 EL 268
E+
Sbjct: 239 EV 240
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 127/282 (45%), Gaps = 58/282 (20%)
Query: 91 LGQGGFGGVYKG---------------RLLDD---------FVNEVASISRTSHVNVVTL 126
LG G FG V+KG ++++D + + +I H ++V L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTS-KPCQYLRWEKMYEIVIGIAKGLEYLH- 184
LG C G++ L+ +++P GSL V + P L W + IAKG+ YL
Sbjct: 81 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG------VQIAKGMYYLEE 133
Query: 185 HGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC--TTKEGIVSSLLGARGIIGYIAP 242
HG ++H ++ N+LL +++DFG+A L K+ + S A+ I ++A
Sbjct: 134 HG----MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE---AKTPIKWMAL 186
Query: 243 EVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFK 302
E S +FG+ +H+SDV+S+G+ + EL+ +G+ + + +E+
Sbjct: 187 E--SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE-------VPDLLEKGERLA 237
Query: 303 LPGVVTRKENEIAKKMIIVGLWCIQA--RPSDRPPMNEVIEM 342
P + T I M++V W I RP+ + NE M
Sbjct: 238 QPQICT-----IDVYMVMVKCWMIDENIRPTFKELANEFTRM 274
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 127/282 (45%), Gaps = 58/282 (20%)
Query: 91 LGQGGFGGVYKG---------------RLLDD---------FVNEVASISRTSHVNVVTL 126
LG G FG V+KG ++++D + + +I H ++V L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTS-KPCQYLRWEKMYEIVIGIAKGLEYLH- 184
LG C G++ L+ +++P GSL V + P L W + IAKG+ YL
Sbjct: 99 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG------VQIAKGMYYLEE 151
Query: 185 HGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC--TTKEGIVSSLLGARGIIGYIAP 242
HG ++H ++ N+LL +++DFG+A L K+ + S A+ I ++A
Sbjct: 152 HG----MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE---AKTPIKWMAL 204
Query: 243 EVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFK 302
E S +FG+ +H+SDV+S+G+ + EL+ +G+ + + +E+
Sbjct: 205 E--SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE-------VPDLLEKGERLA 255
Query: 303 LPGVVTRKENEIAKKMIIVGLWCIQA--RPSDRPPMNEVIEM 342
P + T I M++V W I RP+ + NE M
Sbjct: 256 QPQICT-----IDVYMVMVKCWMIDENIRPTFKELANEFTRM 292
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 87 FKDKLGQGGFGGVYKGRL-----------------------LDDFVNEVASISRTSHVNV 123
F +LG+G FG V R L DF E+ + H N+
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 124 VTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
V G C R LI E++P GSL ++ K + + K+ + I KG+E
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGME 129
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
YL + + +H ++ NIL++ + KI DFGL K+ + I + A
Sbjct: 130 YL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA 186
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMEL 268
PE + + + S SDV+SFG+++ EL
Sbjct: 187 PESLTES--KFSVASDVWSFGVVLYEL 211
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 37/204 (18%)
Query: 89 DKLGQGGFGGVY----------------------KGRLLDDFVNEVASISRTSHVNVVTL 126
DKLG GG VY K L F EV + S+ SH N+V++
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
+ E + L+ E++ +L +++ ++ P L + I G+++ H
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGP---LSVDTAINFTNQILDGIKHAH-- 128
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
+I+H DIKP NIL+D + KI DFG+AK + E ++ G + Y +PE
Sbjct: 129 -DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS--ETSLTQTNHVLGTVQYFSPE--- 182
Query: 247 RNFGEVSHK-SDVYSFGMMIMELV 269
+ GE + + +D+YS G+++ E++
Sbjct: 183 QAKGEATDECTDIYSIGIVLYEML 206
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 135/292 (46%), Gaps = 80/292 (27%)
Query: 91 LGQGGFGGVYKGRLLDD---FV------------NEVASISRTSHVNVVTLLGFCLEG-- 133
+G GGFG V+K + D +V EV ++++ HVN+V G C +G
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNG-CWDGFD 77
Query: 134 ---------NNRA------LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
++R+ + EF G+LE+++ K + L E+ I K
Sbjct: 78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL----ALELFEQITK 133
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLG------ 232
G++Y+H S K+++ D+KP NI L + KI DFGL V+SL
Sbjct: 134 GVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGL----------VTSLKNDGKRXR 180
Query: 233 ARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWI 291
++G + Y++PE + S+++G+ + D+Y+ G+++ EL+ D+ ++S +F
Sbjct: 181 SKGTLRYMSPEQISSQDYGK---EVDLYALGLILAELLHV---CDTAFETSK--FFTDL- 231
Query: 292 YRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEML 343
R+ + + +KE + +K+ + +P DRP +E++ L
Sbjct: 232 -------RDGIISDIFDKKEKTLLQKL-------LSKKPEDRPNTSEILRTL 269
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 93/220 (42%), Gaps = 40/220 (18%)
Query: 92 GQGGFGGVYKGRLLDDFVN----------------EVASISRTSHVNVVTLLGFCLEGN- 134
+G FG V+K +LL+++V EV S+ H N++ +G G
Sbjct: 33 ARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTS 92
Query: 135 ---NRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH------ 185
+ LI F GSL F+ + W ++ I +A+GL YLH
Sbjct: 93 VDVDLWLITAFHEKGSLSDFL-------KANVVSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 186 -GCSTKILHFDIKPHNILLDEDFCPKISDFGLA-KLCTTKEGIVSSLLGARGIIGYIAPE 243
G I H DIK N+LL + I+DFGLA K K G G Y+APE
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA--GDTHGQVGTRRYMAPE 203
Query: 244 VF--SRNFGEVSH-KSDVYSFGMMIMELVGCKNNLDSGVD 280
V + NF + + D+Y+ G+++ EL D VD
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD 243
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 48/233 (20%)
Query: 72 LKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRLL-------------------------D 106
LK + S V+ F ++LG+ FG VYKG L +
Sbjct: 3 LKEISLSAVR-----FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE 57
Query: 107 DFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVY----------NGD 156
+F +E +R H NVV LLG + ++I+ + +G L +F+ D
Sbjct: 58 EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 117
Query: 157 TSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGL 216
L +V IA G+EYL S ++H D+ N+L+ + KISD GL
Sbjct: 118 DRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
Query: 217 AKLCTTKEGIVSSLLGARGI-IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMEL 268
+ + LLG + I ++APE +G+ S SD++S+G+++ E+
Sbjct: 175 FREVYAAD--YYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEV 223
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 125/312 (40%), Gaps = 60/312 (19%)
Query: 73 KRYNFSDVKKLTN---SFKDKLGQGGFGGVYKGRLLD----------------------- 106
K + SD+K++ + LG G FG VY+G++
Sbjct: 35 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 94
Query: 107 --DFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ-- 162
DF+ E IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q
Sbjct: 95 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPS 153
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP------KISDFGL 216
L + + IA G +YL +H DI N LL CP KI DFG+
Sbjct: 154 SLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGM 207
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLD 276
A+ + G A + ++ PE F G + K+D +SFG+++ E+ +
Sbjct: 208 ARD-IYRAGYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL-GYMP 263
Query: 277 SGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPM 336
S+ EV ++ D PG V R + C Q +P DRP
Sbjct: 264 YPSKSNQEVL--EFVTSGGRMDPPKNCPGPVYR-----------IMTQCWQHQPEDRPNF 310
Query: 337 NEVIEMLQGSTE 348
++E ++ T+
Sbjct: 311 AIILERIEYCTQ 322
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 45/224 (20%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLD------------------------DFVNEVASI 115
+K+ K +LG+G FG V+ + DF E +
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 69
Query: 116 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--------VYNGDTSKPCQYLRWE 167
+ H ++V G C+EG+ +++E+M +G L KF V + + P + L
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE-LTQS 128
Query: 168 KMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV 227
+M I IA G+ YL S +H D+ N L+ E+ KI DFG+++ + +
Sbjct: 129 QMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD--- 182
Query: 228 SSLLGARGI--IGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMEL 268
+G + I ++ PE + R F + +SDV+S G+++ E+
Sbjct: 183 YYRVGGHTMLPIRWMPPESIMYRKF---TTESDVWSLGVVLWEI 223
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 125/312 (40%), Gaps = 60/312 (19%)
Query: 73 KRYNFSDVKKLTN---SFKDKLGQGGFGGVYKGRLLD----------------------- 106
K + SD+K++ + LG G FG VY+G++
Sbjct: 58 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 117
Query: 107 --DFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ-- 162
DF+ E IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q
Sbjct: 118 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPS 176
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP------KISDFGL 216
L + + IA G +YL +H DI N LL CP KI DFG+
Sbjct: 177 SLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGM 230
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLD 276
A+ + G A + ++ PE F G + K+D +SFG+++ E+ +
Sbjct: 231 ARD-IYRAGYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL-GYMP 286
Query: 277 SGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPM 336
S+ EV ++ D PG V R + C Q +P DRP
Sbjct: 287 YPSKSNQEVL--EFVTSGGRMDPPKNCPGPVYR-----------IMTQCWQHQPEDRPNF 333
Query: 337 NEVIEMLQGSTE 348
++E ++ T+
Sbjct: 334 AIILERIEYCTQ 345
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 37/211 (17%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRLL-------------------DDFVNEVASISRTS 119
D KK F +K+GQG G VY + + +NE+ +
Sbjct: 17 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 75
Query: 120 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
+ N+V L L G+ ++ E++ GSL V ++ C + ++ + +
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETC--MDEGQIAAVCRECLQA 128
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
LE+LH S +++H DIK NILL D K++DFG T ++ S+++G +
Sbjct: 129 LEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP---YW 182
Query: 240 IAPEVFSRN-FGEVSHKSDVYSFGMMIMELV 269
+APEV +R +G K D++S G+M +E++
Sbjct: 183 MAPEVVTRKAYGP---KVDIWSLGIMAIEMI 210
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 134/301 (44%), Gaps = 85/301 (28%)
Query: 91 LGQGGFGGVYKGRLLDD---FV------------NEVASISRTSHVNVVTLLGFCLEGNN 135
+G GGFG V+K + D +V EV ++++ HVN+V G C +G
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNG-CWDG-- 76
Query: 136 RALIYEFMP---NGSLEKFVYNGDTSK-------PCQYL-----------------RWEK 168
+++ P + SLE Y+ + SK C ++ R EK
Sbjct: 77 ----FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 132
Query: 169 M-----YEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTK 223
+ E+ I KG++Y+H S K++H D+KP NI L + KI DFGL
Sbjct: 133 LDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 189
Query: 224 EGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSS 282
S +G + Y++PE + S+++G+ + D+Y+ G+++ EL+ D+ ++S
Sbjct: 190 GKRTRS----KGTLRYMSPEQISSQDYGK---EVDLYALGLILAELLHV---CDTAFETS 239
Query: 283 SEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEM 342
+F R+ + + +KE + +K+ + +P DRP +E++
Sbjct: 240 K--FFTDL--------RDGIISDIFDKKEKTLLQKL-------LSKKPEDRPNTSEILRT 282
Query: 343 L 343
L
Sbjct: 283 L 283
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 32/206 (15%)
Query: 90 KLGQGGFGGVYKGR-LLD---------------------DFVNEVASISRTSHVNVVTLL 127
K+G+G F VY+ LLD D + E+ + + +H NV+
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY 98
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+E N ++ E G L + + + K + + +++ + + LE++H
Sbjct: 99 ASFIEDNELNIVLELADAGDLSRMIKHFKKQK--RLIPERTVWKYFVQLCSALEHMH--- 153
Query: 188 STKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSR 247
S +++H DIKP N+ + K+ D GL + ++K SL+G Y++PE
Sbjct: 154 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTP---YYMSPERIHE 210
Query: 248 NFGEVSHKSDVYSFGMMIMELVGCKN 273
N + KSD++S G ++ E+ ++
Sbjct: 211 N--GYNFKSDIWSLGCLLYEMAALQS 234
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 37/211 (17%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRLL-------------------DDFVNEVASISRTS 119
D KK F +K+GQG G VY + + +NE+ +
Sbjct: 17 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 75
Query: 120 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
+ N+V L L G+ ++ E++ GSL V ++ C + ++ + +
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETC--MDEGQIAAVCRECLQA 128
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
LE+LH S +++H DIK NILL D K++DFG T ++ S ++G +
Sbjct: 129 LEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTP---YW 182
Query: 240 IAPEVFSRN-FGEVSHKSDVYSFGMMIMELV 269
+APEV +R +G K D++S G+M +E++
Sbjct: 183 MAPEVVTRKAYGP---KVDIWSLGIMAIEMI 210
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 31/194 (15%)
Query: 91 LGQGGFGGV----YKGRLL-----------DDFVNEVASISRTSHVNVVTLLGFCLEGNN 135
+G+G FG V Y+G + F+ E + +++ H N+V LLG +E
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 88
Query: 136 RA-LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHF 194
++ E+M GSL ++ S+ L + + + + + + +EYL +H
Sbjct: 89 GLYIVTEYMAKGSLVDYL----RSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHR 141
Query: 195 DIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSH 254
D+ N+L+ ED K+SDFGL K ++ + + + + APE + S
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDT------GKLPVKWTAPEALREK--KFST 193
Query: 255 KSDVYSFGMMIMEL 268
KSDV+SFG+++ E+
Sbjct: 194 KSDVWSFGILLWEI 207
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 106 DDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF---VYNGDTSKPCQ 162
DDF NE+ I+ + +T G + +IYE+M N S+ KF + D + C
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC- 146
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTT 222
++ + + I+ + Y+H+ I H D+KP NIL+D++ K+SDFG ++
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD 204
Query: 223 KEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGM 263
K+ + G+RG ++ PE FS K D++S G+
Sbjct: 205 KK-----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGI 240
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 128/311 (41%), Gaps = 60/311 (19%)
Query: 76 NFSDVKKLTNSFKDKLGQGGFGGVY----------KGRLL--------------DDFVNE 111
+ +K+ K +LG+G FG V+ K ++L DF E
Sbjct: 8 HVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQRE 67
Query: 112 VASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF----------VYNGDTSKPC 161
++ H ++V G C +G+ +++E+M +G L KF + +G +
Sbjct: 68 AELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAK 127
Query: 162 QYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT 221
L +M I IA G+ YL S +H D+ N L+ + KI DFG+++
Sbjct: 128 GELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVY 184
Query: 222 TKEGIVSSLLGARGI--IGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSG 278
+ + +G + I ++ PE + R F + +SDV+SFG+++ E+
Sbjct: 185 STD---YYRVGGHTMLPIRWMPPESIMYRKF---TTESDVWSFGVILWEIFTYGKQPWFQ 238
Query: 279 VDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ ++ + + Q R + P V K++ V L C Q P R + E
Sbjct: 239 LSNTE-------VIECITQGRVLERPRVC-------PKEVYDVMLGCWQREPQQRLNIKE 284
Query: 339 VIEMLQGSTEA 349
+ ++L +A
Sbjct: 285 IYKILHALGKA 295
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 31/194 (15%)
Query: 91 LGQGGFGGV----YKGRLL-----------DDFVNEVASISRTSHVNVVTLLGFCLE-GN 134
+G+G FG V Y+G + F+ E + +++ H N+V LLG +E
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 73
Query: 135 NRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHF 194
++ E+M GSL ++ S+ L + + + + + + +EYL +H
Sbjct: 74 GLYIVTEYMAKGSLVDYL----RSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHR 126
Query: 195 DIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSH 254
D+ N+L+ ED K+SDFGL K ++ + + + + APE + S
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDT------GKLPVKWTAPEALREK--KFST 178
Query: 255 KSDVYSFGMMIMEL 268
KSDV+SFG+++ E+
Sbjct: 179 KSDVWSFGILLWEI 192
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 31/194 (15%)
Query: 91 LGQGGFGGV----YKGRLL-----------DDFVNEVASISRTSHVNVVTLLGFCLE-GN 134
+G+G FG V Y+G + F+ E + +++ H N+V LLG +E
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 260
Query: 135 NRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHF 194
++ E+M GSL ++ S+ L + + + + + + +EYL +H
Sbjct: 261 GLYIVTEYMAKGSLVDYL----RSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHR 313
Query: 195 DIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSH 254
D+ N+L+ ED K+SDFGL K ++ + + + + APE + S
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDT------GKLPVKWTAPEALREK--KFST 365
Query: 255 KSDVYSFGMMIMEL 268
KSDV+SFG+++ E+
Sbjct: 366 KSDVWSFGILLWEI 379
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 127/316 (40%), Gaps = 68/316 (21%)
Query: 73 KRYNFSDVKKLTN---SFKDKLGQGGFGGVYKGRLLD----------------------- 106
K + SD+K++ + LG G FG VY+G++
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 107 --DFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ-- 162
DF+ E IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q
Sbjct: 78 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPS 136
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP------KISDFGL 216
L + + IA G +YL +H DI N LL CP KI DFG+
Sbjct: 137 SLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGM 190
Query: 217 A----KLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
A + ++G + L + ++ PE F G + K+D +SFG+++ E+
Sbjct: 191 ARDIYRASYYRKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL- 242
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ S+ EV ++ D PG V R + C Q +P D
Sbjct: 243 GYMPYPSKSNQEVL--EFVTSGGRMDPPKNCPGPVYR-----------IMTQCWQHQPED 289
Query: 333 RPPMNEVIEMLQGSTE 348
RP ++E ++ T+
Sbjct: 290 RPNFAIILERIEYCTQ 305
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 127/316 (40%), Gaps = 68/316 (21%)
Query: 73 KRYNFSDVKKLTN---SFKDKLGQGGFGGVYKGRLLD----------------------- 106
K + SD+K++ + LG G FG VY+G++
Sbjct: 9 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 68
Query: 107 --DFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ-- 162
DF+ E IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q
Sbjct: 69 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPS 127
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP------KISDFGL 216
L + + IA G +YL +H DI N LL CP KI DFG+
Sbjct: 128 SLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGM 181
Query: 217 A----KLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
A + ++G + L + ++ PE F G + K+D +SFG+++ E+
Sbjct: 182 ARDIYRASYYRKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL- 233
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ S+ EV ++ D PG V R + C Q +P D
Sbjct: 234 GYMPYPSKSNQEVL--EFVTSGGRMDPPKNCPGPVYRIMTQ-----------CWQHQPED 280
Query: 333 RPPMNEVIEMLQGSTE 348
RP ++E ++ T+
Sbjct: 281 RPNFAIILERIEYCTQ 296
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 127/316 (40%), Gaps = 68/316 (21%)
Query: 73 KRYNFSDVKKLTN---SFKDKLGQGGFGGVYKGRLLD----------------------- 106
K + SD+K++ + LG G FG VY+G++
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 91
Query: 107 --DFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ-- 162
DF+ E IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q
Sbjct: 92 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPS 150
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP------KISDFGL 216
L + + IA G +YL +H DI N LL CP KI DFG+
Sbjct: 151 SLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGM 204
Query: 217 A----KLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
A + ++G + L + ++ PE F G + K+D +SFG+++ E+
Sbjct: 205 ARDIYRASYYRKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL- 256
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ S+ EV ++ D PG V R + C Q +P D
Sbjct: 257 GYMPYPSKSNQEVL--EFVTSGGRMDPPKNCPGPVYR-----------IMTQCWQHQPED 303
Query: 333 RPPMNEVIEMLQGSTE 348
RP ++E ++ T+
Sbjct: 304 RPNFAIILERIEYCTQ 319
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 37/211 (17%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRLL-------------------DDFVNEVASISRTS 119
D KK F +K+GQG G VY + + +NE+ +
Sbjct: 17 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 75
Query: 120 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
+ N+V L L G+ ++ E++ GSL V ++ C + ++ + +
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETC--MDEGQIAAVCRECLQA 128
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
LE+LH S +++H DIK NILL D K++DFG T ++ S ++G +
Sbjct: 129 LEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTP---YW 182
Query: 240 IAPEVFSRN-FGEVSHKSDVYSFGMMIMELV 269
+APEV +R +G K D++S G+M +E++
Sbjct: 183 MAPEVVTRKAYGP---KVDIWSLGIMAIEMI 210
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 37/211 (17%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRLL-------------------DDFVNEVASISRTS 119
D KK F +K+GQG G VY + + +NE+ +
Sbjct: 18 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 76
Query: 120 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
+ N+V L L G+ ++ E++ GSL V ++ C + ++ + +
Sbjct: 77 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETC--MDEGQIAAVCRECLQA 129
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
LE+LH S +++H DIK NILL D K++DFG T ++ S ++G +
Sbjct: 130 LEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTP---YW 183
Query: 240 IAPEVFSRN-FGEVSHKSDVYSFGMMIMELV 269
+APEV +R +G K D++S G+M +E++
Sbjct: 184 MAPEVVTRKAYGP---KVDIWSLGIMAIEMI 211
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 127/316 (40%), Gaps = 68/316 (21%)
Query: 73 KRYNFSDVKKLTN---SFKDKLGQGGFGGVYKGRLLD----------------------- 106
K + SD+K++ + LG G FG VY+G++
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 76
Query: 107 --DFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ-- 162
DF+ E IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRE-TRPRPSQPS 135
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP------KISDFGL 216
L + + IA G +YL +H DI N LL CP KI DFG+
Sbjct: 136 SLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGM 189
Query: 217 A----KLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
A + ++G + L + ++ PE F G + K+D +SFG+++ E+
Sbjct: 190 ARDIYRASYYRKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL- 241
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ S+ EV ++ D PG V R + C Q +P D
Sbjct: 242 GYMPYPSKSNQEVL--EFVTSGGRMDPPKNCPGPVYR-----------IMTQCWQHQPED 288
Query: 333 RPPMNEVIEMLQGSTE 348
RP ++E ++ T+
Sbjct: 289 RPNFAIILERIEYCTQ 304
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 127/316 (40%), Gaps = 68/316 (21%)
Query: 73 KRYNFSDVKKLTN---SFKDKLGQGGFGGVYKGRLLD----------------------- 106
K + SD+K++ + LG G FG VY+G++
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 76
Query: 107 --DFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ-- 162
DF+ E IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPS 135
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP------KISDFGL 216
L + + IA G +YL +H DI N LL CP KI DFG+
Sbjct: 136 SLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGM 189
Query: 217 A----KLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
A + ++G + L + ++ PE F G + K+D +SFG+++ E+
Sbjct: 190 ARDIYRASYYRKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL- 241
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ S+ EV ++ D PG V R + C Q +P D
Sbjct: 242 GYMPYPSKSNQEVL--EFVTSGGRMDPPKNCPGPVYR-----------IMTQCWQHQPED 288
Query: 333 RPPMNEVIEMLQGSTE 348
RP ++E ++ T+
Sbjct: 289 RPNFAIILERIEYCTQ 304
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 127/316 (40%), Gaps = 68/316 (21%)
Query: 73 KRYNFSDVKKLTN---SFKDKLGQGGFGGVYKGRLLD----------------------- 106
K + SD+K++ + LG G FG VY+G++
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 107 --DFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ-- 162
DF+ E IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPS 136
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP------KISDFGL 216
L + + IA G +YL +H DI N LL CP KI DFG+
Sbjct: 137 SLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGM 190
Query: 217 A----KLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
A + ++G + L + ++ PE F G + K+D +SFG+++ E+
Sbjct: 191 ARDIYRASYYRKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL- 242
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ S+ EV ++ D PG V R + C Q +P D
Sbjct: 243 GYMPYPSKSNQEVL--EFVTSGGRMDPPKNCPGPVYR-----------IMTQCWQHQPED 289
Query: 333 RPPMNEVIEMLQGSTE 348
RP ++E ++ T+
Sbjct: 290 RPNFAIILERIEYCTQ 305
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 127/316 (40%), Gaps = 68/316 (21%)
Query: 73 KRYNFSDVKKLTN---SFKDKLGQGGFGGVYKGRLLD----------------------- 106
K + SD+K++ + LG G FG VY+G++
Sbjct: 34 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 93
Query: 107 --DFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ-- 162
DF+ E IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q
Sbjct: 94 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPS 152
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP------KISDFGL 216
L + + IA G +YL +H DI N LL CP KI DFG+
Sbjct: 153 SLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGM 206
Query: 217 A----KLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
A + ++G + L + ++ PE F G + K+D +SFG+++ E+
Sbjct: 207 ARDIYRASYYRKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL- 258
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ S+ EV ++ D PG V R + C Q +P D
Sbjct: 259 GYMPYPSKSNQEVL--EFVTSGGRMDPPKNCPGPVYR-----------IMTQCWQHQPED 305
Query: 333 RPPMNEVIEMLQGSTE 348
RP ++E ++ T+
Sbjct: 306 RPNFAIILERIEYCTQ 321
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 31/194 (15%)
Query: 91 LGQGGFGGV----YKGRLL-----------DDFVNEVASISRTSHVNVVTLLGFCLEGNN 135
+G+G FG V Y+G + F+ E + +++ H N+V LLG +E
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 79
Query: 136 RA-LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHF 194
++ E+M GSL ++ S+ L + + + + + + +EYL +H
Sbjct: 80 GLYIVTEYMAKGSLVDYL----RSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHR 132
Query: 195 DIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSH 254
D+ N+L+ ED K+SDFGL K ++ + + + + APE S
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDT------GKLPVKWTAPEALRE--AAFST 184
Query: 255 KSDVYSFGMMIMEL 268
KSDV+SFG+++ E+
Sbjct: 185 KSDVWSFGILLWEI 198
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 127/316 (40%), Gaps = 68/316 (21%)
Query: 73 KRYNFSDVKKLTN---SFKDKLGQGGFGGVYKGRLLD----------------------- 106
K + SD+K++ + LG G FG VY+G++
Sbjct: 24 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 83
Query: 107 --DFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ-- 162
DF+ E IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q
Sbjct: 84 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPS 142
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP------KISDFGL 216
L + + IA G +YL +H DI N LL CP KI DFG+
Sbjct: 143 SLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGM 196
Query: 217 A----KLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
A + ++G + L + ++ PE F G + K+D +SFG+++ E+
Sbjct: 197 ARDIYRASYYRKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL- 248
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ S+ EV ++ D PG V R + C Q +P D
Sbjct: 249 GYMPYPSKSNQEVL--EFVTSGGRMDPPKNCPGPVYR-----------IMTQCWQHQPED 295
Query: 333 RPPMNEVIEMLQGSTE 348
RP ++E ++ T+
Sbjct: 296 RPNFAIILERIEYCTQ 311
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 127/316 (40%), Gaps = 68/316 (21%)
Query: 73 KRYNFSDVKKLTN---SFKDKLGQGGFGGVYKGRLLD----------------------- 106
K + SD+K++ + LG G FG VY+G++
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 107 --DFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ-- 162
DF+ E IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPS 136
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP------KISDFGL 216
L + + IA G +YL +H DI N LL CP KI DFG+
Sbjct: 137 SLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGM 190
Query: 217 A----KLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
A + ++G + L + ++ PE F G + K+D +SFG+++ E+
Sbjct: 191 AQDIYRASYYRKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL- 242
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ S+ EV ++ D PG V R + C Q +P D
Sbjct: 243 GYMPYPSKSNQEVL--EFVTSGGRMDPPKNCPGPVYR-----------IMTQCWQHQPED 289
Query: 333 RPPMNEVIEMLQGSTE 348
RP ++E ++ T+
Sbjct: 290 RPNFAIILERIEYCTQ 305
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 127/316 (40%), Gaps = 68/316 (21%)
Query: 73 KRYNFSDVKKLTN---SFKDKLGQGGFGGVYKGRLLD----------------------- 106
K + SD+K++ + LG G FG VY+G++
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 91
Query: 107 --DFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ-- 162
DF+ E IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRE-TRPRPSQPS 150
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP------KISDFGL 216
L + + IA G +YL +H DI N LL CP KI DFG+
Sbjct: 151 SLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGM 204
Query: 217 A----KLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
A + ++G + L + ++ PE F G + K+D +SFG+++ E+
Sbjct: 205 ARDIYRASYYRKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL- 256
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ S+ EV ++ D PG V R + C Q +P D
Sbjct: 257 GYMPYPSKSNQEVL--EFVTSGGRMDPPKNCPGPVYR-----------IMTQCWQHQPED 303
Query: 333 RPPMNEVIEMLQGSTE 348
RP ++E ++ T+
Sbjct: 304 RPNFAIILERIEYCTQ 319
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 123/306 (40%), Gaps = 57/306 (18%)
Query: 91 LGQGGFGGVYKGRLLDD------------------------FVNEVASISRTSHVNVVTL 126
LG G FG VYKG + D ++E ++ V L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ-YLRWEKMYEIVIGIAKGLEYLHH 185
LG CL + L+ + MP G L V Q L W + IAKG+ YL
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSYLE- 136
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
+++H D+ N+L+ KI+DFGLA+L E + G + I ++A E +
Sbjct: 137 --DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA-DGGKVPIKWMALESI 193
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
R F +H+SDV+S+G+ + EL+ G+ + I +E+ P
Sbjct: 194 LRRRF---THQSDVWSYGVTVWELMTFGAKPYDGIPARE-------IPDLLEKGERLPQP 243
Query: 305 GVVTRKENEIAKKMIIVGLWCI--QARPSDRPPMNEVIEMLQGSTEALQIPPTPFLSSPP 362
+ T I MI+V W I + RP R ++E M + + I P
Sbjct: 244 PICT-----IDVYMIMVKCWMIDSECRPRFRELVSEFSRMARDPQRFVVIQNEDL---GP 295
Query: 363 RAPIDS 368
+P+DS
Sbjct: 296 ASPLDS 301
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 110/280 (39%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 123
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + C ++L G + Y+
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTL---SGTLDYLP 175
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 176 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 224
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 225 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 127/316 (40%), Gaps = 68/316 (21%)
Query: 73 KRYNFSDVKKLTN---SFKDKLGQGGFGGVYKGRLLD----------------------- 106
K + SD+K++ + LG G FG VY+G++
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQD 91
Query: 107 --DFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ-- 162
DF+ E IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPS 150
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP------KISDFGL 216
L + + IA G +YL +H DI N LL CP KI DFG+
Sbjct: 151 SLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGM 204
Query: 217 A----KLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
A + ++G + L + ++ PE F G + K+D +SFG+++ E+
Sbjct: 205 ARDIYRASYYRKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL- 256
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ S+ EV ++ D PG V R + C Q +P D
Sbjct: 257 GYMPYPSKSNQEVL--EFVTSGGRMDPPKNCPGPVYR-----------IMTQCWQHQPED 303
Query: 333 RPPMNEVIEMLQGSTE 348
RP ++E ++ T+
Sbjct: 304 RPNFAIILERIEYCTQ 319
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 127/316 (40%), Gaps = 68/316 (21%)
Query: 73 KRYNFSDVKKLTN---SFKDKLGQGGFGGVYKGRLLD----------------------- 106
K + SD+K++ + LG G FG VY+G++
Sbjct: 44 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 103
Query: 107 --DFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQ-- 162
DF+ E IS+ +H N+V +G L+ R ++ E M G L+ F+ +P Q
Sbjct: 104 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPS 162
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP------KISDFGL 216
L + + IA G +YL +H DI N LL CP KI DFG+
Sbjct: 163 SLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGM 216
Query: 217 A----KLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
A + ++G + L + ++ PE F G + K+D +SFG+++ E+
Sbjct: 217 ARDIYRASYYRKGGCAML-----PVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL- 268
Query: 273 NNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSD 332
+ S+ EV ++ D PG V R + C Q +P D
Sbjct: 269 GYMPYPSKSNQEVL--EFVTSGGRMDPPKNCPGPVYR-----------IMTQCWQHQPED 315
Query: 333 RPPMNEVIEMLQGSTE 348
RP ++E ++ T+
Sbjct: 316 RPNFAIILERIEYCTQ 331
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 37/211 (17%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRLL-------------------DDFVNEVASISRTS 119
D KK F +K+GQG G VY + + +NE+ +
Sbjct: 18 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 76
Query: 120 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
+ N+V L L G+ ++ E++ GSL V ++ C + ++ + +
Sbjct: 77 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETC--MDEGQIAAVCRECLQA 129
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
LE+LH S +++H +IK NILL D K++DFG T ++ S+++G +
Sbjct: 130 LEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP---YW 183
Query: 240 IAPEVFSRN-FGEVSHKSDVYSFGMMIMELV 269
+APEV +R +G K D++S G+M +E++
Sbjct: 184 MAPEVVTRKAYGP---KVDIWSLGIMAIEMI 211
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 116/279 (41%), Gaps = 54/279 (19%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRLL----------------------DDFVNEVASIS 116
D +KL + ++ +G G FG VY R + D + EV +
Sbjct: 51 DPEKLFSDLRE-IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
+ H N + G L + L+ E+ + + + KP Q + ++ + G
Sbjct: 110 KLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH---KKPLQEV---EIAAVTHGA 163
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+GL YLH S ++H D+K NILL E K+ DFG A + V G
Sbjct: 164 LQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-------GT 213
Query: 237 IGYIAPEV-FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV 295
++APEV + + G+ K DV+S G+ +EL K L +++ S +Y H+
Sbjct: 214 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL-FNMNAMSALY-------HI 265
Query: 296 EQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRP 334
Q+ P + + +E + + C+Q P DRP
Sbjct: 266 AQNES---PALQSGHWSEYFRNFVDS---CLQKIPQDRP 298
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 51/221 (23%)
Query: 91 LGQGGFGGVYKGR------------------LLDDFVNEVASISRTSHVNVVTLLGFCLE 132
LGQG FG V K R L ++EV ++ +H VV LE
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 133 GNN----------RALIY---EFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N ++ ++ E+ NG+L +++ + ++ + ++ + + I +
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQ-----QRDEYWRLFRQILEA 128
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV-----------S 228
L Y+H S I+H D+KP NI +DE KI DFGLAK I+
Sbjct: 129 LSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 229 SLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+L A G Y+A EV G + K D+YS G++ E++
Sbjct: 186 NLTSAIGTAMYVATEVLD-GTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 107/276 (38%), Gaps = 60/276 (21%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYN---GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
+ + LI E+ P G + K + D + Y + +A L Y H
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY---------ITELANALSYCH- 130
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVF 245
S +++H DIKP N+LL KI+DFG + + S G + Y+ PE+
Sbjct: 131 --SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRXXLXGTLDYLPPEMI 183
Query: 246 SRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPG 305
+ K D++S G++ E + K ++ + Y+ + + EF P
Sbjct: 184 EGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EFTFPD 232
Query: 306 VVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
VT ++ ++ ++ PS RP + EV+E
Sbjct: 233 FVTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 116/279 (41%), Gaps = 54/279 (19%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVYKGRLL----------------------DDFVNEVASIS 116
D +KL + ++ +G G FG VY R + D + EV +
Sbjct: 12 DPEKLFSDLRE-IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 117 RTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGI 176
+ H N + G L + L+ E+ + + + KP Q + ++ + G
Sbjct: 71 KLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH---KKPLQEV---EIAAVTHGA 124
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
+GL YLH S ++H D+K NILL E K+ DFG A + V G
Sbjct: 125 LQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-------GT 174
Query: 237 IGYIAPEV-FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV 295
++APEV + + G+ K DV+S G+ +EL K L +++ S +Y H+
Sbjct: 175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL-FNMNAMSALY-------HI 226
Query: 296 EQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRP 334
Q+ P + + +E + + C+Q P DRP
Sbjct: 227 AQNES---PALQSGHWSEYFRNFVDS---CLQKIPQDRP 259
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 36/220 (16%)
Query: 70 LPLKRYNFSDVKKLTNSFKDKLGQGGFGGVYKG-----------RLLD---------DFV 109
+P + N +D ++L +++G+G FG V+KG +++D D
Sbjct: 11 VPGMQNNIADPEELFTKL-ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ 69
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 169
E+ +S+ V G L+G+ +I E++ GS + G P + M
Sbjct: 70 QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG----PFDEFQIATM 125
Query: 170 YEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSS 229
+ ++ KGL+YLH S K +H DIK N+LL E K++DFG+A T + ++
Sbjct: 126 LKEIL---KGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 179
Query: 230 LLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+G ++APEV ++ K+D++S G+ +EL
Sbjct: 180 FVGTP---FWMAPEVIQQS--AYDSKADIWSLGITAIELA 214
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 47/221 (21%)
Query: 79 DVKKLTNSFK--DKLGQGGFGGVYKGRLLDDFVNEVASISRT------------------ 118
DVK ++ D LG+G F VYK R D N++ +I +
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKAR--DKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 119 --------SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
SH N++ LL +N +L+++FM LE + + ++ K Y
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHI---KAY 117
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
++ +GLEYLH ILH D+KP+N+LLDE+ K++DFGLAK +
Sbjct: 118 MLMT--LQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQ 172
Query: 231 LGARGIIGYIAPEVF--SRNFGEVSHKSDVYSFGMMIMELV 269
+ R Y APE+ +R +G D+++ G ++ EL+
Sbjct: 173 VVTR---WYRAPELLFGARMYGV---GVDMWAVGCILAELL 207
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 43/222 (19%)
Query: 92 GQGGFGGVYKGRLLDDFV----------------NEVASISRTSHVNVVTLLGFCLEGNN 135
+G FG V+K +L++DFV E+ S H N++ + G+N
Sbjct: 24 ARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSN 83
Query: 136 RA----LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH------ 185
LI F GSL ++ + W ++ + +++GL YLH
Sbjct: 84 LEVELWLITAFHDKGSLTDYLKG-------NIITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 186 --GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKE--GIVSSLLGARGIIGYIA 241
G I H D K N+LL D ++DFGLA + G +G R Y+A
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTR---RYMA 193
Query: 242 PEVF--SRNFGEVSH-KSDVYSFGMMIMELVGCKNNLDSGVD 280
PEV + NF + + D+Y+ G+++ ELV D VD
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVD 235
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 94/198 (47%), Gaps = 28/198 (14%)
Query: 91 LGQGGFGGVY---------KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI-- 139
LGQG FG V+ G L V + A++ V + N+ ++
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 140 -YEFMPNGSLE---KFVYNGDT----SKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
Y F G L F+ GD SK + E + + +A GL++LH S I
Sbjct: 96 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE-EDVKFYLAELALGLDHLH---SLGI 151
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGE 251
++ D+KP NILLDE+ K++DFGL+K E S G + Y+APEV +R G
Sbjct: 152 IYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGT---VEYMAPEVVNRQ-GH 207
Query: 252 VSHKSDVYSFGMMIMELV 269
SH +D +S+G+++ E++
Sbjct: 208 -SHSADWWSYGVLMFEML 224
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 169
NEV + H NVV + L G+ ++ EF+ G+L V + ++ E++
Sbjct: 91 NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-------EQI 143
Query: 170 YEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSS 229
+ + + + L YLH + ++H DIK +ILL D K+SDFG C V
Sbjct: 144 ATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFG---FCAQVSKEVPK 197
Query: 230 LLGARGIIGYIAPEVFSR-NFGEVSHKSDVYSFGMMIMELV 269
G ++APEV SR +G + D++S G+M++E++
Sbjct: 198 RKXLVGTPYWMAPEVISRLPYGT---EVDIWSLGIMVIEMI 235
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 108/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 122
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S K++H DIKP N+LL KI+DFG + + S G + Y+
Sbjct: 123 YCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRAALCGTLDYLP 174
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 175 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQDT--------YKRISRV-EF 223
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 224 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 38/210 (18%)
Query: 87 FKDKLGQGGFGGVY-----------------KGRL---LDDFVNEVASISRTSHVNVVTL 126
FK KLG G FG V+ K R ++ E+ + H N++ +
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
+ +N ++ E G L + + + L + E++ + L Y H
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKA--LSEGYVAELMKQMMNALAYFH-- 141
Query: 187 CSTKILHFDIKPHNILLDEDFCP----KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAP 242
S ++H D+KP NIL +D P KI DFGLA+L + E + A G Y+AP
Sbjct: 142 -SQHVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTN----AAGTALYMAP 195
Query: 243 EVFSRNFGEVSHKSDVYSFG-MMIMELVGC 271
EVF R+ V+ K D++S G +M L GC
Sbjct: 196 EVFKRD---VTFKCDIWSAGVVMYFLLTGC 222
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 106/276 (38%), Gaps = 60/276 (21%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYN---GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
+ + LI E+ P G + K + D + Y + +A L Y H
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY---------ITELANALSYCH- 130
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVF 245
S +++H DIKP N+LL KI+DFG + + G + Y+ PE+
Sbjct: 131 --SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC-----GTLDYLPPEMI 183
Query: 246 SRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPG 305
+ K D++S G++ E + K ++ + Y+ + + EF P
Sbjct: 184 EGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EFTFPD 232
Query: 306 VVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
VT ++ ++ ++ PS RP + EV+E
Sbjct: 233 FVTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 122
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + S G + Y+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRAALCGTLDYLP 174
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 175 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 223
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 224 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 169
NEV + H NVV + L G ++ EF+ G+L V L E++
Sbjct: 91 NEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-------RLNEEQI 143
Query: 170 YEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSS 229
+ + + L YLH + ++H DIK +ILL D K+SDFG C V
Sbjct: 144 ATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFG---FCAQISKDVPK 197
Query: 230 LLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G ++APEV SR+ + + D++S G+M++E+V
Sbjct: 198 RKXLVGTPYWMAPEVISRSL--YATEVDIWSLGIMVIEMV 235
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 28/247 (11%)
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS----LEKFVYNGDTSKP 160
+D+ + E+ ++S+ H N+V+ + + L+ + + GS ++ V G+
Sbjct: 52 MDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG 111
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
L + I+ + +GLEYLH +H D+K NILL ED +I+DFG++
Sbjct: 112 V--LDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFL 166
Query: 221 TTKEGIVSSLLGAR--GIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSG 278
T I + + G ++APEV + G K+D++SFG+ +EL +G
Sbjct: 167 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELA-------TG 218
Query: 279 VDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKE-----NEIAKKMIIVGLWCIQARPSDR 333
+ Y P + Q+ L V KE + +KMI + C+Q P R
Sbjct: 219 A-APYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISL---CLQKDPEKR 274
Query: 334 PPMNEVI 340
P E++
Sbjct: 275 PTAAELL 281
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS----LEKFVYNGDTSKP 160
+D+ + E+ ++S+ H N+V+ + + L+ + + GS ++ V G+
Sbjct: 57 MDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG 116
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
L + I+ + +GLEYLH +H D+K NILL ED +I+DFG++
Sbjct: 117 V--LDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFL 171
Query: 221 TTKEGIVSSLLGAR--GIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
T I + + G ++APEV + G K+D++SFG+ +EL
Sbjct: 172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELA 221
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 125
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + S G + Y+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRAALCGTLDYLP 177
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 178 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 226
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 227 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 107/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 119
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + G + Y+
Sbjct: 120 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC-----GTLDYLP 171
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 172 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 220
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 221 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 253
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 107/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 121
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + G + Y+
Sbjct: 122 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC-----GTLDYLP 173
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 174 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 222
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 223 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 255
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 107/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 125
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + G + Y+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC-----GTLDYLP 177
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 178 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 226
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 227 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 107/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 126
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + G + Y+
Sbjct: 127 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC-----GTLDYLP 178
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 179 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 227
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 228 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 260
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 122
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + S G + Y+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRTXLCGTLDYLP 174
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 175 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 223
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 224 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 122
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + S G + Y+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRTDLCGTLDYLP 174
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 175 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 223
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 224 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 122
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + S G + Y+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRXXLCGTLDYLP 174
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 175 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 223
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 224 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 125
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + S G + Y+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRXXLCGTLDYLP 177
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 178 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 226
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 227 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 107/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 125
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + G + Y+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC-----GTLDYLP 177
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 178 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 226
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 227 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 107/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 122
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + G + Y+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC-----GTLDYLP 174
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 175 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 223
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 224 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 123
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + S G + Y+
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRTDLCGTLDYLP 175
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 176 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 224
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 225 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 122
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + S G + Y+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRTDLCGTLDYLP 174
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 175 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 223
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 224 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 21/175 (12%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
+AKG+E+L S K +H D+ NILL E KI DFGLA+ V AR
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK-GDARL 257
Query: 236 IIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRH 294
+ ++APE +F R + + +SDV+SFG+++ E+ + GV E R
Sbjct: 258 PLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRR 308
Query: 295 VEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGSTEA 349
+++ + P T +M L C PS RP +E++E L +A
Sbjct: 309 LKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 124
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + S G + Y+
Sbjct: 125 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRXXLCGTLDYLP 176
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 177 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 225
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 226 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 258
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 116/303 (38%), Gaps = 73/303 (24%)
Query: 68 GPLPLKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGR----------------------LL 105
GPL +++ D + LG+G FG VY R +
Sbjct: 1 GPLGSRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE 55
Query: 106 DDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS-------LEKFVYNGDTS 158
EV S H N++ L G+ + LI E+ P G+ L KF D
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQ 111
Query: 159 KPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAK 218
+ Y + +A L Y H S +++H DIKP N+LL KI+DFG +
Sbjct: 112 RTATY---------ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
Query: 219 LCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSG 278
+ S G + Y+ PE+ + K D++S G++ E + K ++
Sbjct: 160 HAPS-----SRRDDLCGTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 279 VDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ Y+ + + EF P VT ++ ++ ++ PS RP + E
Sbjct: 213 TYQET--------YKRISR-VEFTFPDFVTEGARDLISRL-------LKHNPSQRPMLRE 256
Query: 339 VIE 341
V+E
Sbjct: 257 VLE 259
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 108 FVNEVASISRTSHVNVVTLLGFCLEGNNRAL--IYEFMPNGSLEKFVYNGDTSKPCQYLR 165
V+EV + H N+V ++ N L + E+ G L + G +K QYL
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKG--TKERQYLD 109
Query: 166 WEKMYEIVIGIAKGLEYLHHGCS--TKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTK 223
E + ++ + L+ H +LH D+KP N+ LD K+ DFGLA++
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
Query: 224 EGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMEL 268
E +G Y++PE +R + KSD++S G ++ EL
Sbjct: 170 EDFAKEFVGT---PYYMSPEQMNRM--SYNEKSDIWSLGCLLYEL 209
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 127
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + S G + Y+
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRTDLCGTLDYLP 179
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 180 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 228
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 229 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 107/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 127
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + G + Y+
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC-----GTLDYLP 179
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 180 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 228
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 229 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 21/175 (12%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
+AKG+E+L S K +H D+ NILL E KI DFGLA+ V AR
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK-GDARL 255
Query: 236 IIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRH 294
+ ++APE +F R + + +SDV+SFG+++ E+ + GV E R
Sbjct: 256 PLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRR 306
Query: 295 VEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGSTEA 349
+++ + P T +M L C PS RP +E++E L +A
Sbjct: 307 LKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 354
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 21/188 (11%)
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTT 222
+L E + +AKG+E+L S K +H D+ NILL E KI DFGLA+
Sbjct: 194 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 250
Query: 223 KEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDS 281
V AR + ++APE +F R + + +SDV+SFG+++ E+ + GV
Sbjct: 251 DPDYVRK-GDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKI 306
Query: 282 SSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
E R +++ + P T +M L C PS RP +E++E
Sbjct: 307 DEE------FCRRLKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVE 353
Query: 342 MLQGSTEA 349
L +A
Sbjct: 354 HLGNLLQA 361
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 124/311 (39%), Gaps = 61/311 (19%)
Query: 91 LGQGGFGGVYKGRL------------------------LDDFVNEVASISRTSHVNVVTL 126
LG+G FG V + +L +++F+ E A + H +V L
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 127 LGFCLEGNNRA------LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGL 180
+G L + +I FM +G L F+ + L + + ++ IA G+
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 181 EYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTT----KEGIVSSLLGARGI 236
EYL S +H D+ N +L ED ++DFGL++ + ++G S L
Sbjct: 151 EYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL-----P 202
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVE 296
+ ++A E + N V SDV++FG+ + E++ +G++++ IY ++
Sbjct: 203 VKWLALESLADNLYTV--HSDVWAFGVTMWEIMTRGQTPYAGIENAE-------IYNYLI 253
Query: 297 QDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPP---MNEVIEMLQGSTEALQIP 353
K P E +++ + C A P RP + +E + G L
Sbjct: 254 GGNRLKQP-------PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS 306
Query: 354 PTPFLSSPPRA 364
P + RA
Sbjct: 307 QDPLYINIERA 317
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 76 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 127
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 128 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAPEIL- 182
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 238
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 239 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 265
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 21/175 (12%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
+AKG+E+L S K +H D+ NILL E KI DFGLA+ V AR
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK-GDARL 264
Query: 236 IIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRH 294
+ ++APE +F R + + +SDV+SFG+++ E+ + GV E R
Sbjct: 265 PLKWMAPETIFDRVY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRR 315
Query: 295 VEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGSTEA 349
+++ + P T +M L C PS RP +E++E L +A
Sbjct: 316 LKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 363
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 120
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAPEIL- 175
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 231
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 232 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 258
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 122
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + S G + Y+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRTELCGTLDYLP 174
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 175 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 223
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 224 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 39/203 (19%)
Query: 89 DKLGQGGFGGVYKGRLLDDFVNEVASIS----------RTSHVNVVTLLGFC-------- 130
D++G+G FG VYKG +D+ EV +I +T+L C
Sbjct: 25 DRIGKGSFGEVYKG--IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRY 82
Query: 131 ----LEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
L+ +I E++ GS + G L + I+ I KGL+YLH
Sbjct: 83 FGSYLKSTKLWIIMEYLGGGSALDLLKPGP-------LEETYIATILREILKGLDYLH-- 133
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S + +H DIK N+LL E K++DFG+A T + + +G ++APEV
Sbjct: 134 -SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTP---FWMAPEVIK 189
Query: 247 RNFGEVSHKSDVYSFGMMIMELV 269
++ K+D++S G+ +EL
Sbjct: 190 QS--AYDFKADIWSLGITAIELA 210
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 148
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + S G + Y+
Sbjct: 149 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRTTLCGTLDYLP 200
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 201 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 249
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 250 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 282
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 33/242 (13%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-----------YNGDTSKPCQYLRWE 167
H N+V LLG C G +I E+ G L F+ YN + P + L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYN-PSHNPEEQLSSR 166
Query: 168 KMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAK-LCTTKEGI 226
+ +A+G+ +L S +H D+ N+LL KI DFGLA+ + I
Sbjct: 167 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 223
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVY 286
V AR + ++APE V +SDV+S+G+++ E+ N G+ +S+
Sbjct: 224 VKG--NARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEIFSLGLNPYPGILVNSK-- 277
Query: 287 FPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGS 346
Y+ V+ + P + I + C P+ RP ++ LQ
Sbjct: 278 ----FYKLVKDGYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQEQ 326
Query: 347 TE 348
+
Sbjct: 327 AQ 328
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 88/209 (42%), Gaps = 43/209 (20%)
Query: 91 LGQGGFGGVYKGRLLDDFV-------------------NEVASISRTSHVNVVTLLGFCL 131
LG+G +G VY GR L + V E+A H N+V LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 132 EGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWE--KMYEIVIG-----IAKGLEYLH 184
E + E +P GSL + + +W K E IG I +GL+YLH
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRS----------KWGPLKDNEQTIGFYTKQILEGLKYLH 139
Query: 185 HGCSTKILHFDIKPHNILLDE-DFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
+I+H DIK N+L++ KISDFG +K GI G + Y+APE
Sbjct: 140 ---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA---GINPCTETFTGTLQYMAPE 193
Query: 244 VFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
+ + +D++S G I+E+ K
Sbjct: 194 IIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 36/214 (16%)
Query: 66 NYGPLPLKRYN--------FSDVKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISR 117
N+G + L RY+ VK+L +S D+ DF E+ I +
Sbjct: 19 NFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--------------RDFQREI-QILK 63
Query: 118 TSHVNVVTLLGFCLEGNNRA---LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 174
H + + G R L+ E++P+G L F+ L ++
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR-----LDASRLLLYSS 118
Query: 175 GIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR 234
I KG+EYL S + +H D+ NIL++ + KI+DFGLAKL + +
Sbjct: 119 QICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQ 175
Query: 235 GIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMEL 268
I + APE S N S +SDV+SFG+++ EL
Sbjct: 176 SPIFWYAPESLSDNI--FSRQSDVWSFGVVLYEL 207
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 169
NEV + H NVV + L G+ ++ EF+ G+L V + ++ E++
Sbjct: 197 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-------EQI 249
Query: 170 YEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSS 229
+ + + + L LH + ++H DIK +ILL D K+SDFG C V
Sbjct: 250 AAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPR 303
Query: 230 LLGARGIIGYIAPEVFSR-NFGEVSHKSDVYSFGMMIMELV 269
G ++APE+ SR +G + D++S G+M++E+V
Sbjct: 304 RKXLVGTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMV 341
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 51/221 (23%)
Query: 91 LGQGGFGGVYKGR------------------LLDDFVNEVASISRTSHVNVVTLLGFCLE 132
LGQG FG V K R L ++EV ++ +H VV LE
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 133 GNN----------RALIY---EFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N ++ ++ E+ N +L +++ + ++ + ++ + + I +
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQ-----QRDEYWRLFRQILEA 128
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV-----------S 228
L Y+H S I+H D+KP NI +DE KI DFGLAK I+
Sbjct: 129 LSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 229 SLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+L A G Y+A EV G + K D+YS G++ E++
Sbjct: 186 NLTSAIGTAMYVATEVLD-GTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT--- 169
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSXQE 216
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 139
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + S G + Y+
Sbjct: 140 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRTTLCGTLDYLP 191
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 192 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 240
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 241 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 273
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 169
NEV + H NVV + L G+ ++ EF+ G+L V + ++ E++
Sbjct: 77 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-------EQI 129
Query: 170 YEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSS 229
+ + + + L LH + ++H DIK +ILL D K+SDFG C V
Sbjct: 130 AAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPR 183
Query: 230 LLGARGIIGYIAPEVFSR-NFGEVSHKSDVYSFGMMIMELV 269
G ++APE+ SR +G + D++S G+M++E+V
Sbjct: 184 RKXLVGTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMV 221
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 169
NEV + H NVV + L G+ ++ EF+ G+L V + ++ E++
Sbjct: 75 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-------EQI 127
Query: 170 YEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSS 229
+ + + + L LH + ++H DIK +ILL D K+SDFG C V
Sbjct: 128 AAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPR 181
Query: 230 LLGARGIIGYIAPEVFSR-NFGEVSHKSDVYSFGMMIMELV 269
G ++APE+ SR +G + D++S G+M++E+V
Sbjct: 182 RKXLVGTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMV 219
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 36/214 (16%)
Query: 66 NYGPLPLKRYN--------FSDVKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISR 117
N+G + L RY+ VK+L +S D+ DF E+ I +
Sbjct: 23 NFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--------------RDFQREI-QILK 67
Query: 118 TSHVNVVTLLGFCLEGNNRA---LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 174
H + + G R L+ E++P+G L F+ L ++
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-----LDASRLLLYSS 122
Query: 175 GIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR 234
I KG+EYL S + +H D+ NIL++ + KI+DFGLAKL + +
Sbjct: 123 QICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 179
Query: 235 GIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMEL 268
I + APE S N S +SDV+SFG+++ EL
Sbjct: 180 SPIFWYAPESLSDNI--FSRQSDVWSFGVVLYEL 211
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 38/258 (14%)
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPC--- 161
L D ++E + + +H +V+ L G C + LI E+ GSL F+ P
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLG 129
Query: 162 ---------------QYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDED 206
+ L + I++G++YL K++H D+ NIL+ E
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEG 186
Query: 207 FCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIM 266
KISDFGL++ ++ V G R + ++A E + + +SDV+SFG+++
Sbjct: 187 RKMKISDFGLSRDVYEEDSXVKRSQG-RIPVKWMAIESLFDHI--YTTQSDVWSFGVLLW 243
Query: 267 ELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCI 326
E+V N G+ P ++ ++ + P + +++M + L C
Sbjct: 244 EIVTLGGNPYPGIP-------PERLFNLLKTGHRMERP-------DNCSEEMYRLMLQCW 289
Query: 327 QARPSDRPPMNEVIEMLQ 344
+ P RP ++ + L+
Sbjct: 290 KQEPDKRPVFADISKDLE 307
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 38/258 (14%)
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPC--- 161
L D ++E + + +H +V+ L G C + LI E+ GSL F+ P
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLG 129
Query: 162 ---------------QYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDED 206
+ L + I++G++YL K++H D+ NIL+ E
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEG 186
Query: 207 FCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIM 266
KISDFGL++ ++ V G R + ++A E + + +SDV+SFG+++
Sbjct: 187 RKMKISDFGLSRDVYEEDSYVKRSQG-RIPVKWMAIESLFDHI--YTTQSDVWSFGVLLW 243
Query: 267 ELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCI 326
E+V N G+ P ++ ++ + P + +++M + L C
Sbjct: 244 EIVTLGGNPYPGIP-------PERLFNLLKTGHRMERP-------DNCSEEMYRLMLQCW 289
Query: 327 QARPSDRPPMNEVIEMLQ 344
+ P RP ++ + L+
Sbjct: 290 KQEPDKRPVFADISKDLE 307
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 120
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 175
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 231
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 232 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 258
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 120
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 175
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 231
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 232 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 258
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 108/281 (38%), Gaps = 70/281 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 127
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + G + Y+
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC-----GTLDYLP 179
Query: 242 PE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDRE 300
PE + R E K D++S G++ E + K ++ + Y+ + + E
Sbjct: 180 PEXIEGRXHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-E 227
Query: 301 FKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
F P VT ++ ++ ++ PS RP + EV+E
Sbjct: 228 FTFPDFVTEGARDLISRL-------LKHNPSQRPXLREVLE 261
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 119
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 174
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 230
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 231 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 257
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 119
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 174
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 230
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 231 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 257
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 126/313 (40%), Gaps = 64/313 (20%)
Query: 80 VKKLTNSFKDKLGQGGFGGVY----------KGRLL--------------DDFVNEVASI 115
+K+ K +LG+G FG V+ + ++L DF E +
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 74
Query: 116 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN----------GDTSKPCQYLR 165
+ H ++V G C EG +++E+M +G L +F+ + G+ P L
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP-LG 133
Query: 166 WEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEG 225
++ + +A G+ YL +H D+ N L+ + KI DFG+++ + +
Sbjct: 134 LGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD- 189
Query: 226 IVSSLLGARGI--IGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSS 282
+G R + I ++ PE + R F + +SDV+SFG+++ E+ + ++
Sbjct: 190 --YYRVGGRTMLPIRWMPPESILYRKF---TTESDVWSFGVVLWEIFTYGKQPWYQLSNT 244
Query: 283 SEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEM 342
+ + Q RE + P + I + C Q P R + +V
Sbjct: 245 EAIDC-------ITQGRELERPRACPPEVYAIMRG-------CWQREPQQRHSIKDVHAR 290
Query: 343 LQGSTEALQIPPT 355
LQ +A PP
Sbjct: 291 LQALAQA---PPV 300
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 169
NEV + H NVV + L G+ ++ EF+ G+L V + ++ E++
Sbjct: 66 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-------EQI 118
Query: 170 YEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSS 229
+ + + + L LH + ++H DIK +ILL D K+SDFG C V
Sbjct: 119 AAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPR 172
Query: 230 LLGARGIIGYIAPEVFSR-NFGEVSHKSDVYSFGMMIMELV 269
G ++APE+ SR +G + D++S G+M++E+V
Sbjct: 173 RKXLVGTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMV 210
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT--- 170
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 171 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 36/214 (16%)
Query: 66 NYGPLPLKRYN--------FSDVKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISR 117
N+G + L RY+ VK+L +S D+ DF E+ I +
Sbjct: 35 NFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--------------RDFQREI-QILK 79
Query: 118 TSHVNVVTLLGFCLEGNNRA---LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 174
H + + G R L+ E++P+G L F+ L ++
Sbjct: 80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-----LDASRLLLYSS 134
Query: 175 GIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR 234
I KG+EYL S + +H D+ NIL++ + KI+DFGLAKL + +
Sbjct: 135 QICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 191
Query: 235 GIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMEL 268
I + APE S N S +SDV+SFG+++ EL
Sbjct: 192 SPIFWYAPESLSDNI--FSRQSDVWSFGVVLYEL 223
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 73 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 124
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 125 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 179
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 235
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 236 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 262
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 169
NEV + H NVV + L G+ ++ EF+ G+L V + ++ E++
Sbjct: 120 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-------EQI 172
Query: 170 YEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSS 229
+ + + + L LH + ++H DIK +ILL D K+SDFG C V
Sbjct: 173 AAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPR 226
Query: 230 LLGARGIIGYIAPEVFSR-NFGEVSHKSDVYSFGMMIMELV 269
G ++APE+ SR +G + D++S G+M++E+V
Sbjct: 227 RKXLVGTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMV 264
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT--- 169
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLSFCH-- 120
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAPEIL- 175
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 231
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 232 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 258
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT--- 169
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 120
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 175
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 231
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 232 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 258
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT--- 169
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 71 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 122
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 123 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 177
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 233
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 234 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 260
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 72 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 123
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 124 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 178
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 234
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 235 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 261
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 71 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 122
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 123 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 177
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 233
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 234 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 260
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 107/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 123
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + G + Y+
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC-----GTLDYLP 175
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 176 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 224
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 225 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 76 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 127
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 128 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAPEIL- 182
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLF--RIFRTLGTPDEVVWPGV 238
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 239 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 265
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNRAL--IYEFMPNGSLEKFVYNGDTSKPCQ 162
++ E+A + + H NVV L+ + N L ++E + G V T KP
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP----VMEVPTLKPLS 135
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTT 222
+ ++ +I KG+EYLH+ KI+H DIKP N+L+ ED KI+DFG++
Sbjct: 136 EDQARFYFQDLI---KGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 223 KEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKS-DVYSFGMMI 265
+ ++S+ +G ++APE S S K+ DV++ G+ +
Sbjct: 190 SDALLSNTVGTP---AFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 121
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 122 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAPEIL- 176
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 232
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 233 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 259
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 119
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAPEIL- 174
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 230
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 231 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 257
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 36/214 (16%)
Query: 66 NYGPLPLKRYN--------FSDVKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISR 117
N+G + L RY+ VK+L +S D+ DF E+ I +
Sbjct: 22 NFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--------------RDFQREI-QILK 66
Query: 118 TSHVNVVTLLGFCLEGNNRA---LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI 174
H + + G R L+ E++P+G L F+ L ++
Sbjct: 67 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-----LDASRLLLYSS 121
Query: 175 GIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR 234
I KG+EYL S + +H D+ NIL++ + KI+DFGLAKL + +
Sbjct: 122 QICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 178
Query: 235 GIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMEL 268
I + APE S N S +SDV+SFG+++ EL
Sbjct: 179 SPIFWYAPESLSDNI--FSRQSDVWSFGVVLYEL 210
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 120
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAPEIL- 175
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 231
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 232 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 258
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 119
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAPEIL- 174
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 230
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 231 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 257
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 169
NEV + H NVV + L G+ ++ EF+ G+L V + ++ E++
Sbjct: 70 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-------EQI 122
Query: 170 YEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSS 229
+ + + + L LH + ++H DIK +ILL D K+SDFG C V
Sbjct: 123 AAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPR 176
Query: 230 LLGARGIIGYIAPEVFSR-NFGEVSHKSDVYSFGMMIMELV 269
G ++APE+ SR +G + D++S G+M++E+V
Sbjct: 177 RKXLVGTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMV 214
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 120
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAPEIL- 175
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 231
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 232 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 258
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 119
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAPEIL- 174
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 230
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 231 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 257
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 121
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 122 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 176
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 232
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 233 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 259
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 126/313 (40%), Gaps = 64/313 (20%)
Query: 80 VKKLTNSFKDKLGQGGFGGVY----------KGRLL--------------DDFVNEVASI 115
+K+ K +LG+G FG V+ + ++L DF E +
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 68
Query: 116 SRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN----------GDTSKPCQYLR 165
+ H ++V G C EG +++E+M +G L +F+ + G+ P L
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP-LG 127
Query: 166 WEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEG 225
++ + +A G+ YL +H D+ N L+ + KI DFG+++ + +
Sbjct: 128 LGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD- 183
Query: 226 IVSSLLGARGI--IGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSS 282
+G R + I ++ PE + R F + +SDV+SFG+++ E+ + ++
Sbjct: 184 --YYRVGGRTMLPIRWMPPESILYRKF---TTESDVWSFGVVLWEIFTYGKQPWYQLSNT 238
Query: 283 SEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEM 342
+ + Q RE + P + I + C Q P R + +V
Sbjct: 239 EAIDC-------ITQGRELERPRACPPEVYAIMRG-------CWQREPQQRHSIKDVHAR 284
Query: 343 LQGSTEALQIPPT 355
LQ +A PP
Sbjct: 285 LQALAQA---PPV 294
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 121
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 122 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 176
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 232
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 233 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 259
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 120
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAPEIL- 175
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 231
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 232 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 258
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT--- 169
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT--- 169
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT--- 169
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 114
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 115 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT--- 168
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 169 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 215
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 82/181 (45%), Gaps = 15/181 (8%)
Query: 106 DDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLR 165
++ E+ + +H NVV G EGN + L E+ G L D +P +
Sbjct: 50 ENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMP 103
Query: 166 WEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTK 223
+ G+ YLH I H DIKP N+LLDE KISDFGLA + +
Sbjct: 104 EPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 224 EGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSS 283
E +++ + G + Y+APE+ R + DV+S G+++ ++ + D DS
Sbjct: 161 ERLLNKMCGT---LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216
Query: 284 E 284
E
Sbjct: 217 E 217
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT--- 170
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 171 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 72 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 123
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 124 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 178
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 234
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 235 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 261
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT--- 170
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 171 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 120
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 175
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 231
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 232 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 258
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT--- 170
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 171 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 129/321 (40%), Gaps = 69/321 (21%)
Query: 77 FSD-----VKKLTNSFKDKLGQGGFGGVY----------KGRLL--------------DD 107
FSD +K+ K +LG+G FG V+ + ++L D
Sbjct: 30 FSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD 89
Query: 108 FVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN----------GDT 157
F E ++ H ++V G C EG +++E+M +G L +F+ + G+
Sbjct: 90 FQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 149
Query: 158 SKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLA 217
P L ++ + +A G+ YL +H D+ N L+ + KI DFG++
Sbjct: 150 VAPGP-LGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 205
Query: 218 KLCTTKEGIVSSLLGARGI--IGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNN 274
+ + + +G R + I ++ PE + R F + +SDV+SFG+++ E+
Sbjct: 206 RDIYSTD---YYRVGGRTMLPIRWMPPESILYRKF---TTESDVWSFGVVLWEIFTYGKQ 259
Query: 275 LDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRP 334
+ ++ + + Q RE + P + I + C Q P R
Sbjct: 260 PWYQLSNTEAIDC-------ITQGRELERPRACPPEVYAIMRG-------CWQREPQQRH 305
Query: 335 PMNEVIEMLQGSTEALQIPPT 355
+ +V LQ +A PP
Sbjct: 306 SIKDVHARLQALAQA---PPV 323
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 73 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 124
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 125 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAPEILL 180
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 181 -GCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLF--RIFRTLGTPDEVVWPGV 235
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 236 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 262
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 119/275 (43%), Gaps = 54/275 (19%)
Query: 89 DKLGQGGFGGVYKG-----------RLLD---------DFVNEVASISRTSHVNVVTLLG 128
+K+G+G FG V+KG +++D D E+ +S+ V G
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNG--DTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
L+ +I E++ GS + G D ++ LR I KGL+YLH
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---------EILKGLDYLH-- 141
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S K +H DIK N+LL E K++DFG+A T + ++ +G ++APEV
Sbjct: 142 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTP---FWMAPEVIK 197
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
++ K+D++S G+ +EL G SE++ P + + ++ L G
Sbjct: 198 QS--AYDSKADIWSLGITAIELA-------RGEPPHSELH-PMKVLFLIPKNNPPTLEGN 247
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
++ E + C+ PS RP E+++
Sbjct: 248 YSKPLKEFVEA-------CLNKEPSFRPTAKELLK 275
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 119/275 (43%), Gaps = 54/275 (19%)
Query: 89 DKLGQGGFGGVYKG-----------RLLD---------DFVNEVASISRTSHVNVVTLLG 128
+K+G+G FG V+KG +++D D E+ +S+ V G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNG--DTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
L+ +I E++ GS + G D ++ LR I KGL+YLH
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---------EILKGLDYLH-- 121
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S K +H DIK N+LL E K++DFG+A T + ++ +G ++APEV
Sbjct: 122 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTP---FWMAPEVIK 177
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
++ K+D++S G+ +EL G SE++ P + + ++ L G
Sbjct: 178 QS--AYDSKADIWSLGITAIELA-------RGEPPHSELH-PMKVLFLIPKNNPPTLEGN 227
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
++ E + C+ PS RP E+++
Sbjct: 228 YSKPLKEFVEA-------CLNKEPSFRPTAKELLK 255
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT--- 170
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 171 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT--- 170
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 171 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEK 168
NE+A + + H N+V L G + LI + + G L ++ V G +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-------FYTERD 117
Query: 169 MYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNIL---LDEDFCPKISDFGLAKLCTTKEG 225
++ + ++YLH I+H D+KP N+L LDED ISDFGL+K+ E
Sbjct: 118 ASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----ED 170
Query: 226 IVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
S L A G GY+APEV ++ S D +S G++
Sbjct: 171 PGSVLSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT--- 169
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 71 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 122
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 123 -SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 177
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 233
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 234 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 260
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT--- 169
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT--- 169
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT--- 169
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 121
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 122 -SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 176
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 232
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 233 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 259
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 107/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 125
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI++FG + + G + Y+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC-----GTLDYLP 177
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 178 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 226
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 227 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 88/209 (42%), Gaps = 43/209 (20%)
Query: 91 LGQGGFGGVYKGRLLDDFV-------------------NEVASISRTSHVNVVTLLGFCL 131
LG+G +G VY GR L + V E+A H N+V LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 132 EGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWE--KMYEIVIG-----IAKGLEYLH 184
E + E +P GSL + + +W K E IG I +GL+YLH
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRS----------KWGPLKDNEQTIGFYTKQILEGLKYLH 125
Query: 185 HGCSTKILHFDIKPHNILLDE-DFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
+I+H DIK N+L++ KISDFG +K GI G + Y+APE
Sbjct: 126 ---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA---GINPCTETFTGTLQYMAPE 179
Query: 244 VFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
+ + +D++S G I+E+ K
Sbjct: 180 IIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT--- 170
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 171 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 48/214 (22%)
Query: 89 DKLGQGGFGGVYKGR-------------LLDD-------FVNEVASISRTSHVNVVTLLG 128
+KLG G + VYKG LD + E++ + H N+V L
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYN---GDTSKPCQ-----YLRWEKMYEIVIGIAKGL 180
N L++EFM N L+K++ + G+T + + Y +W+ + +GL
Sbjct: 71 VIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQ--------LLQGL 121
Query: 181 EYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYI 240
+ H KILH D+KP N+L+++ K+ DFGLA+ SS + + Y
Sbjct: 122 AFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVT---LWYR 175
Query: 241 APEVF--SRNFGEVSHKSDVYSFGMMIMELVGCK 272
AP+V SR + S D++S G ++ E++ K
Sbjct: 176 APDVLMGSRTY---STSIDIWSCGCILAEMITGK 206
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query: 106 DDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLR 165
++ + E + + + +V L+G C + L+ E G L KF+ P
Sbjct: 55 EEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVS--- 110
Query: 166 WEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEG 225
+ E++ ++ G++YL +H D+ N+LL KISDFGL+K +
Sbjct: 111 --NVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165
Query: 226 IVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIME 267
++ + + + APE NF + S +SDV+S+G+ + E
Sbjct: 166 YYTARSAGKWPLKWYAPECI--NFRKFSSRSDVWSYGVTMWE 205
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 33/239 (13%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-------YNGDTSKPCQYLRWEKMYE 171
H N+V LLG C G +I E+ G L F+ + + +P L +
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP---LELRDLLH 156
Query: 172 IVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAK-LCTTKEGIVSSL 230
+A+G+ +L S +H D+ N+LL KI DFGLA+ + IV
Sbjct: 157 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG- 212
Query: 231 LGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPH 289
AR + ++APE +F + + +SDV+S+G+++ E+ N G+ +S+
Sbjct: 213 -NARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWEIFSLGLNPYPGILVNSK----- 263
Query: 290 WIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGSTE 348
Y+ V+ + P + I + C P+ RP ++ LQ +
Sbjct: 264 -FYKLVKDGYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQEQAQ 314
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
+H NVV G EGN + L E+ G L D +P + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL------FDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL--CTTKEGIVSSLLGARGI 236
G+ YLH I H DIKP N+LLDE KISDFGLA + +E +++ + G
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT--- 169
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
+ Y+APE+ R + DV+S G+++ ++ + D DS E
Sbjct: 170 LPYVAPELLKRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 72 DVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 123
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 124 -SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 178
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 234
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 235 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 261
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEK 168
NE+A + + H N+V L G + LI + + G L ++ V G +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-------FYTERD 117
Query: 169 MYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNIL---LDEDFCPKISDFGLAKLCTTKEG 225
++ + ++YLH I+H D+KP N+L LDED ISDFGL+K+ E
Sbjct: 118 ASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----ED 170
Query: 226 IVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
S L A G GY+APEV ++ S D +S G++
Sbjct: 171 PGSVLSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEK 168
NE+A + + H N+V L G + LI + + G L ++ V G +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-------FYTERD 117
Query: 169 MYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNIL---LDEDFCPKISDFGLAKLCTTKEG 225
++ + ++YLH I+H D+KP N+L LDED ISDFGL+K+ E
Sbjct: 118 ASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----ED 170
Query: 226 IVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
S L A G GY+APEV ++ S D +S G++
Sbjct: 171 PGSVLSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 148
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI+DFG + + S G + Y+
Sbjct: 149 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRDDLCGTLDYLP 200
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 201 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISR-VEF 249
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 250 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 282
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+KF+ + T P ++ + + +GL + H
Sbjct: 70 DVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 121
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 122 -SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 176
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 232
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 233 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 259
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEK 168
NE+A + + H N+V L G + LI + + G L ++ V G +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-------FYTERD 117
Query: 169 MYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNIL---LDEDFCPKISDFGLAKLCTTKEG 225
++ + ++YLH I+H D+KP N+L LDED ISDFGL+K+ E
Sbjct: 118 ASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----ED 170
Query: 226 IVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
S L A G GY+APEV ++ S D +S G++
Sbjct: 171 PGSVLSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 108 FVNEVASISRTSHVNVVTLLGFCLEGNNRAL--IYEFMPNGSLEKFVYNGDTSKPCQYLR 165
V+EV + H N+V ++ N L + E+ G L + G +K QYL
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKG--TKERQYLD 109
Query: 166 WEKMYEIVIGIAKGLEYLHHGCS--TKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTK 223
E + ++ + L+ H +LH D+KP N+ LD K+ DFGLA++
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
Query: 224 EGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMEL 268
+ +G Y++PE +R + KSD++S G ++ EL
Sbjct: 170 TSFAKTFVGT---PYYMSPEQMNRM--SYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 108 FVNEVASISRTSHVNVVTLLGFCLEGNNRAL--IYEFMPNGSLEKFVYNGDTSKPCQYLR 165
V+EV + H N+V ++ N L + E+ G L + G +K QYL
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKG--TKERQYLD 109
Query: 166 WEKMYEIVIGIAKGLEYLHHGCS--TKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTK 223
E + ++ + L+ H +LH D+KP N+ LD K+ DFGLA++
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
Query: 224 EGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMEL 268
+ +G Y++PE +R + KSD++S G ++ EL
Sbjct: 170 TSFAKAFVGT---PYYMSPEQMNRM--SYNEKSDIWSLGCLLYEL 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 107/280 (38%), Gaps = 68/280 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 129 FCLEGNNRALIYEFMPNGS-------LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLE 181
+ + LI E+ P G+ L KF D + Y + +A L
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKF----DEQRTATY---------ITELANALS 124
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIA 241
Y H S +++H DIKP N+LL KI++FG + + G + Y+
Sbjct: 125 YCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC-----GTLDYLP 176
Query: 242 PEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREF 301
PE+ + K D++S G++ E + K ++ + Y+ + + EF
Sbjct: 177 PEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRV-EF 225
Query: 302 KLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
P VT ++ ++ ++ PS RP + EV+E
Sbjct: 226 TFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 258
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 51/222 (22%)
Query: 91 LGQGGFGGVYKGR-------------------------LLDDFVNEVASISRTSHVNVVT 125
+G+G FG V++ R + DF E A ++ + N+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 126 LLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQY------------------LRWE 167
LLG C G L++E+M G L +F+ + C L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 168 KMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV 227
+ I +A G+ YL K +H D+ N L+ E+ KI+DFGL++ + +
Sbjct: 175 EQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 228 SSLLGARGI-IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMEL 268
+ G I I ++ PE S + + +SDV+++G+++ E+
Sbjct: 232 AD--GNDAIPIRWMPPE--SIFYNRYTTESDVWAYGVVLWEI 269
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 42/207 (20%)
Query: 89 DKLGQGGFGGVYK------GRL-----------LDDFVNEVASISRTSHVNVVTLLGFCL 131
+KLG+G +G VYK G++ L + + E++ + + +VV G
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 132 EGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
+ + ++ E+ GS+ + + + L +++ I+ KGLEYLH +
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKT-----LTEDEIATILQSTLKGLEYLHF---MRK 146
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG-IIG---YIAPEVFSR 247
+H DIK NILL+ + K++DFG+A G ++ + R +IG ++APEV
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVA-------GQLTDXMAKRNXVIGTPFWMAPEVIQ- 198
Query: 248 NFGEVSHK--SDVYSFGMMIMELVGCK 272
E+ + +D++S G+ +E+ K
Sbjct: 199 ---EIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 33/239 (13%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-------YNGDTSKPCQYLRWEKMYE 171
H N+V LLG C G +I E+ G L F+ + + +P L +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP---LELRDLLH 164
Query: 172 IVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAK-LCTTKEGIVSSL 230
+A+G+ +L S +H D+ N+LL KI DFGLA+ + IV
Sbjct: 165 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG- 220
Query: 231 LGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPH 289
AR + ++APE +F + + +SDV+S+G+++ E+ N G+ +S+
Sbjct: 221 -NARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWEIFSLGLNPYPGILVNSK----- 271
Query: 290 WIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGSTE 348
Y+ V+ + P + I + C P+ RP ++ LQ +
Sbjct: 272 -FYKLVKDGYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQEQAQ 322
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 10/97 (10%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSLLGA 233
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +S +G
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 234 RGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
Y++PE+ + S SD+++ G +I +LV
Sbjct: 198 ---AQYVSPELLTEK--SASKSSDLWALGCIIYQLVA 229
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 54/275 (19%)
Query: 89 DKLGQGGFGGVYKG-----------RLLD---------DFVNEVASISRTSHVNVVTLLG 128
+K+G+G FG V+KG +++D D E+ +S+ V G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNG--DTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
L+ +I E++ GS + G D ++ LR I KGL+YLH
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---------EILKGLDYLH-- 121
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S K +H DIK N+LL E K++DFG+A T + + +G ++APEV
Sbjct: 122 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTP---FWMAPEVIK 177
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
++ K+D++S G+ +EL G SE++ P + + ++ L G
Sbjct: 178 QS--AYDSKADIWSLGITAIELA-------RGEPPHSELH-PMKVLFLIPKNNPPTLEGN 227
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
++ E + C+ PS RP E+++
Sbjct: 228 YSKPLKEFVEA-------CLNKEPSFRPTAKELLK 255
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L FC + + + + NG L K++ G + C + Y
Sbjct: 91 MSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 142
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +
Sbjct: 143 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 199
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 200 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 234
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 50/273 (18%)
Query: 89 DKLGQGGFGGVYKG-----------RLLD---------DFVNEVASISRTSHVNVVTLLG 128
+K+G+G FG V+KG +++D D E+ +S+ V G
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCS 188
L+ +I E++ GS + G L ++ I+ I KGL+YLH S
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPGP-------LDETQIATILREILKGLDYLH---S 137
Query: 189 TKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRN 248
K +H DIK N+LL E K++DFG+A T + + +G ++APEV ++
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTP---FWMAPEVIKQS 194
Query: 249 FGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVT 308
K+D++S G+ +EL G SE++ P + + ++ L G +
Sbjct: 195 --AYDSKADIWSLGITAIELA-------RGEPPHSELH-PMKVLFLIPKNNPPTLEGNYS 244
Query: 309 RKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
+ E + C+ PS RP E+++
Sbjct: 245 KPLKEFVEA-------CLNKEPSFRPTAKELLK 270
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G +D EV+ + H NV+TL + LI E + G L F+ ++
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--- 110
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ E + I G+ YLH S +I HFD+KP NI+L + P KI DFGL
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A K + G ++APE+ N+ + ++D++S G++
Sbjct: 165 AH----KIDFGNEFKNIFGTPAFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 33/202 (16%)
Query: 90 KLGQGGFGGVYKGR-------------------LLDDFVNEVASISRTSHVNVVTLLGFC 130
+LG G FG VYK + L+D++ E+ ++ H N+V LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 131 LEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTK 190
NN ++ EF G+++ + + +P L ++ + L YLH K
Sbjct: 104 YYENNLWILIEFCAGGAVDAVML--ELERP---LTESQIQVVCKQTLDALNYLH---DNK 155
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVF---SR 247
I+H D+K NIL D K++DFG++ T S +G ++APEV +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTP---YWMAPEVVMCETS 212
Query: 248 NFGEVSHKSDVYSFGMMIMELV 269
+K+DV+S G+ ++E+
Sbjct: 213 KDRPYDYKADVWSLGITLIEMA 234
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 33/202 (16%)
Query: 90 KLGQGGFGGVYKGR-------------------LLDDFVNEVASISRTSHVNVVTLLGFC 130
+LG G FG VYK + L+D++ E+ ++ H N+V LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 131 LEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTK 190
NN ++ EF G+++ + + +P L ++ + L YLH K
Sbjct: 104 YYENNLWILIEFCAGGAVDAVML--ELERP---LTESQIQVVCKQTLDALNYLH---DNK 155
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVF---SR 247
I+H D+K NIL D K++DFG++ T S +G ++APEV +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTP---YWMAPEVVMCETS 212
Query: 248 NFGEVSHKSDVYSFGMMIMELV 269
+K+DV+S G+ ++E+
Sbjct: 213 KDRPYDYKADVWSLGITLIEMA 234
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 108/272 (39%), Gaps = 51/272 (18%)
Query: 89 DKLGQGGFGGVYKGRL-------------------------LDDFVNEVASISRTSHVNV 123
+KLG G FG V +G +DDF+ EV ++ H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 124 VTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYL 183
+ L G L + ++ E P GSL + K + + + +A+G+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRL-----RKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 184 HHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
S + +H D+ N+LL KI DFGL + + + + APE
Sbjct: 128 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
Query: 244 VF-SRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFK 302
+R F SH SD + FG+ + E+ G++ S I ++++ E +
Sbjct: 185 SLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-------ILHKIDKEGE-R 233
Query: 303 LPGVVTRKENEIAKKMIIVGLWCIQARPSDRP 334
LP + + + + V + C +P DRP
Sbjct: 234 LP-----RPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 108/272 (39%), Gaps = 51/272 (18%)
Query: 89 DKLGQGGFGGVYKGRL-------------------------LDDFVNEVASISRTSHVNV 123
+KLG G FG V +G +DDF+ EV ++ H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 124 VTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYL 183
+ L G L + ++ E P GSL + K + + + +A+G+ YL
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRL-----RKHQGHFLLGTLSRYAVQVAEGMGYL 137
Query: 184 HHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
S + +H D+ N+LL KI DFGL + + + + APE
Sbjct: 138 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
Query: 244 VF-SRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFK 302
+R F SH SD + FG+ + E+ G++ S I ++++ E +
Sbjct: 195 SLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-------ILHKIDKEGE-R 243
Query: 303 LPGVVTRKENEIAKKMIIVGLWCIQARPSDRP 334
LP + + + + V + C +P DRP
Sbjct: 244 LP-----RPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 56/221 (25%)
Query: 91 LGQGGFGGVYKGRLLD--------------DFVNE--VASISRTSHVNVVTLLGFCLEGN 134
+G+G +G VYKG L + +F+NE + + H N+ + G+
Sbjct: 21 IGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIV----GD 76
Query: 135 NRA---------LIYEFMPNGSLEKFV--YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYL 183
R L+ E+ PNGSL K++ + D C+ + + +GL YL
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCR---------LAHSVTRGLAYL 127
Query: 184 H----HGCSTK--ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV-----SSLLG 232
H G K I H D+ N+L+ D ISDFGL+ T + ++ +
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAIS 187
Query: 233 ARGIIGYIAPEVFS-----RNFGEVSHKSDVYSFGMMIMEL 268
G I Y+APEV R+ + D+Y+ G++ E+
Sbjct: 188 EVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 108/272 (39%), Gaps = 51/272 (18%)
Query: 89 DKLGQGGFGGVYKGRL-------------------------LDDFVNEVASISRTSHVNV 123
+KLG G FG V +G +DDF+ EV ++ H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 124 VTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYL 183
+ L G L + ++ E P GSL + K + + + +A+G+ YL
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRL-----RKHQGHFLLGTLSRYAVQVAEGMGYL 137
Query: 184 HHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
S + +H D+ N+LL KI DFGL + + + + APE
Sbjct: 138 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
Query: 244 VF-SRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFK 302
+R F SH SD + FG+ + E+ G++ S I ++++ E +
Sbjct: 195 SLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-------ILHKIDKEGE-R 243
Query: 303 LPGVVTRKENEIAKKMIIVGLWCIQARPSDRP 334
LP + + + + V + C +P DRP
Sbjct: 244 LP-----RPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 43/217 (19%)
Query: 87 FKDKLGQGGFG------GVYKG------RLLDDFVNEVASISRTS-------HVNVVTLL 127
F KLG+GGF G++ G R+L + R + H N++ L+
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 128 GFCLE----GNNRALIYEFMPNGSL----EKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
+CL + L+ F G+L E+ G+ +L +++ +++GI +G
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGN------FLTEDQILWLLLGICRG 146
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFG-LAKLCTTKEGIVSSLL-----GA 233
LE +H + H D+KP NILL ++ P + D G + + C EG +L
Sbjct: 147 LEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203
Query: 234 RGIIGYIAPEVFS-RNFGEVSHKSDVYSFGMMIMELV 269
R I Y APE+FS ++ + ++DV+S G ++ ++
Sbjct: 204 RCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM 240
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 108/272 (39%), Gaps = 51/272 (18%)
Query: 89 DKLGQGGFGGVYKGRL-------------------------LDDFVNEVASISRTSHVNV 123
+KLG G FG V +G +DDF+ EV ++ H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 124 VTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYL 183
+ L G L + ++ E P GSL + K + + + +A+G+ YL
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRL-----RKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 184 HHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
S + +H D+ N+LL KI DFGL + + + + APE
Sbjct: 132 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 244 VF-SRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFK 302
+R F SH SD + FG+ + E+ G++ S I ++++ E +
Sbjct: 189 SLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-------ILHKIDKEGE-R 237
Query: 303 LPGVVTRKENEIAKKMIIVGLWCIQARPSDRP 334
LP + + + + V + C +P DRP
Sbjct: 238 LP-----RPEDCPQDIYNVMVQCWAHKPEDRP 264
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 109/258 (42%), Gaps = 38/258 (14%)
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPC--- 161
L D ++E + + +H +V+ L G C + LI E+ GSL F+ P
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLG 129
Query: 162 ---------------QYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDED 206
+ L + I++G++YL ++H D+ NIL+ E
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEG 186
Query: 207 FCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIM 266
KISDFGL++ ++ V G R + ++A E + + +SDV+SFG+++
Sbjct: 187 RKMKISDFGLSRDVYEEDSXVKRSQG-RIPVKWMAIESLFDHI--YTTQSDVWSFGVLLW 243
Query: 267 ELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCI 326
E+V N G+ P ++ ++ + P + +++M + L C
Sbjct: 244 EIVTLGGNPYPGIP-------PERLFNLLKTGHRMERP-------DNCSEEMYRLMLQCW 289
Query: 327 QARPSDRPPMNEVIEMLQ 344
+ P RP ++ + L+
Sbjct: 290 KQEPDKRPVFADISKDLE 307
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 88 KKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 139
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----YRAPELI- 194
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 195 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 108/272 (39%), Gaps = 51/272 (18%)
Query: 89 DKLGQGGFGGVYKGRL-------------------------LDDFVNEVASISRTSHVNV 123
+KLG G FG V +G +DDF+ EV ++ H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 124 VTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYL 183
+ L G L + ++ E P GSL + K + + + +A+G+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRL-----RKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 184 HHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
S + +H D+ N+LL KI DFGL + + + + APE
Sbjct: 128 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 244 VF-SRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFK 302
+R F SH SD + FG+ + E+ G++ S I ++++ E +
Sbjct: 185 SLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-------ILHKIDKEGE-R 233
Query: 303 LPGVVTRKENEIAKKMIIVGLWCIQARPSDRP 334
LP + + + + V + C +P DRP
Sbjct: 234 LP-----RPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 139
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----YRAPELI- 194
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 195 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 139
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----YRAPELI- 194
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 195 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 95
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 96 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 147
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 148 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----YRAPELI- 202
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 203 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 243
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 106
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 107 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 158
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 159 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----YRAPELI- 213
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 214 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 254
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 88
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 89 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 140
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 141 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----YRAPELI- 195
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 196 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 236
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 108/272 (39%), Gaps = 51/272 (18%)
Query: 89 DKLGQGGFGGVYKGRL-------------------------LDDFVNEVASISRTSHVNV 123
+KLG G FG V +G +DDF+ EV ++ H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 124 VTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYL 183
+ L G L + ++ E P GSL + K + + + +A+G+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRL-----RKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 184 HHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
S + +H D+ N+LL KI DFGL + + + + APE
Sbjct: 128 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 244 VF-SRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFK 302
+R F SH SD + FG+ + E+ G++ S I ++++ E +
Sbjct: 185 SLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-------ILHKIDKEGE-R 233
Query: 303 LPGVVTRKENEIAKKMIIVGLWCIQARPSDRP 334
LP + + + + V + C +P DRP
Sbjct: 234 LP-----RPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 108/272 (39%), Gaps = 51/272 (18%)
Query: 89 DKLGQGGFGGVYKGRL-------------------------LDDFVNEVASISRTSHVNV 123
+KLG G FG V +G +DDF+ EV ++ H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 124 VTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYL 183
+ L G L + ++ E P GSL + K + + + +A+G+ YL
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRL-----RKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 184 HHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
S + +H D+ N+LL KI DFGL + + + + APE
Sbjct: 132 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 244 VF-SRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFK 302
+R F SH SD + FG+ + E+ G++ S I ++++ E +
Sbjct: 189 SLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-------ILHKIDKEGE-R 237
Query: 303 LPGVVTRKENEIAKKMIIVGLWCIQARPSDRP 334
LP + + + + V + C +P DRP
Sbjct: 238 LP-----RPEDCPQDIYNVMVQCWAHKPEDRP 264
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 121
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 122 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 173
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 174 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----YRAPELI- 228
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 229 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 269
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 99
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 100 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 151
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 152 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----YRAPELI- 206
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 207 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 247
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 91
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 92 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 143
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 144 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----YRAPELI- 198
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 199 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 239
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 136 RA------LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCST 189
+ L+ +++P ++ + + +K + + K+Y + + + L Y+H S
Sbjct: 88 KKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAYIH---SF 141
Query: 190 KILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRN 248
I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----YRAPELI--- 194
Query: 249 FGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 99
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 100 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 151
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 152 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----YRAPELI- 206
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 207 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 247
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 35/205 (17%)
Query: 89 DKLGQGGFGGVYK-----GRLL---------------DDFVNEVASISRTSHVNVVTLLG 128
+K+G+G +G VYK GR++ + E++ + H N+V+L+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCS 188
L++EFM L+K + T ++ +Y+++ G+A H
Sbjct: 87 VIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKI-YLYQLLRGVA-------HCHQ 137
Query: 189 TKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI-VSSLLGARGIIGYIAPEVFSR 247
+ILH D+KP N+L++ D K++DFGLA+ GI V S + Y AP+V
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAF----GIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 248 NFGEVSHKSDVYSFGMMIMELVGCK 272
+ + S D++S G + E++ K
Sbjct: 194 S-KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 103/236 (43%), Gaps = 37/236 (15%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV--YNGDTSKPCQYLRWEK 168
EVA ++ H N+V E + ++ ++ G L K + G + Q L W
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW-- 130
Query: 169 MYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVS 228
+ I L+++H KILH DIK NI L +D ++ DFG+A++ S
Sbjct: 131 ----FVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN------S 177
Query: 229 SLLGARGIIG---YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
++ AR IG Y++PE+ ++KSD+++ G ++ EL K+ ++G + +
Sbjct: 178 TVELARACIGTPYYLSPEICENK--PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVL 235
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
+ V + L +V++ + P DRP +N ++E
Sbjct: 236 KIISGSFPPVSLHYSYDLRSLVSQ---------------LFKRNPRDRPSVNSILE 276
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++EF+ + L+ F+ + T P ++ + + +GL + H
Sbjct: 72 DVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 123
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 124 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 178
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 234
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 235 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 261
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G +D EV+ + H NV+TL + LI E + G L F+ ++
Sbjct: 53 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--- 109
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ E + I G+ YLH S +I HFD+KP NI+L + P KI DFGL
Sbjct: 110 ---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A K + G ++APE+ N+ + ++D++S G++
Sbjct: 164 AH----KIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 205
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 139
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----YRAPELI- 194
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 195 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G +D EV+ + H NV+TL + LI E + G L F+ ++
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--- 110
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ E + I G+ YLH S +I HFD+KP NI+L + P KI DFGL
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A K + G ++APE+ N+ + ++D++S G++
Sbjct: 165 AH----KIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 35/205 (17%)
Query: 89 DKLGQGGFGGVYK-----GRLL---------------DDFVNEVASISRTSHVNVVTLLG 128
+K+G+G +G VYK GR++ + E++ + H N+V+L+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCS 188
L++EFM L+K + T ++ +Y+++ G+A H
Sbjct: 87 VIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKI-YLYQLLRGVA-------HCHQ 137
Query: 189 TKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI-VSSLLGARGIIGYIAPEVFSR 247
+ILH D+KP N+L++ D K++DFGLA+ GI V S + Y AP+V
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAF----GIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 248 NFGEVSHKSDVYSFGMMIMELVGCK 272
+ + S D++S G + E++ K
Sbjct: 194 S-KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G +D EV+ + H NV+TL + LI E + G L F+ ++
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--- 110
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ E + I G+ YLH S +I HFD+KP NI+L + P KI DFGL
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A K + G ++APE+ N+ + ++D++S G++
Sbjct: 165 AH----KIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G +D EV+ + H NV+TL + LI E + G L F+ ++
Sbjct: 53 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--- 109
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ E + I G+ YLH S +I HFD+KP NI+L + P KI DFGL
Sbjct: 110 ---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A K + G ++APE+ N+ + ++D++S G++
Sbjct: 164 AH----KIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 205
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G +D EV+ + H NV+TL + LI E + G L F+ ++
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--- 110
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ E + I G+ YLH S +I HFD+KP NI+L + P KI DFGL
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A K + G ++APE+ N+ + ++D++S G++
Sbjct: 165 AH----KIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 106 DDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLR 165
++ + E + + + +V L+G C + L+ E G L KF+ P
Sbjct: 381 EEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVS--- 436
Query: 166 WEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEG 225
+ E++ ++ G++YL +H ++ N+LL KISDFGL+K +
Sbjct: 437 --NVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491
Query: 226 IVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
++ + + + APE NF + S +SDV+S+G+ + E +
Sbjct: 492 YYTARSAGKWPLKWYAPECI--NFRKFSSRSDVWSYGVTMWEAL 533
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 139
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----YRAPELI- 194
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 195 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 100
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 101 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 152
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 153 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----YRAPELI- 207
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 208 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 248
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G +D EV+ + H NV+TL + LI E + G L F+ ++
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--- 110
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ E + I G+ YLH S +I HFD+KP NI+L + P KI DFGL
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A K + G ++APE+ N+ + ++D++S G++
Sbjct: 165 AH----KIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G +D EV+ + H NV+TL + LI E + G L F+ ++
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--- 110
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ E + I G+ YLH S +I HFD+KP NI+L + P KI DFGL
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A K + G ++APE+ N+ + ++D++S G++
Sbjct: 165 AH----KIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 42/271 (15%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
N L++EF+ + + T P ++ + + +GL + H
Sbjct: 72 DVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH--- 123
Query: 188 STKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSR 247
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL-L 179
Query: 248 NFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVV 307
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGVT 235
Query: 308 TRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 236 SMPDYKPS-----FPKWARQDFSKVVPPLDE 261
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 115
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 116 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 167
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 168 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----YRAPELI- 222
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 223 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 263
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G +D EV+ + H NV+TL + LI E + G L F+ ++
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--- 110
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ E + I G+ YLH S +I HFD+KP NI+L + P KI DFGL
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A K + G ++APE+ N+ + ++D++S G++
Sbjct: 165 AH----KIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 97/242 (40%), Gaps = 35/242 (14%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H N+V LLG C G +I E+ G L F+ + + L + + I A
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL-----RRKSRVLETDPAFAIANSTAS 162
Query: 179 GLEYLHHG----------CSTKILHFDIKPHNILLDEDFCPKISDFGLAK-LCTTKEGIV 227
+ LH S +H D+ N+LL KI DFGLA+ + IV
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 228 SSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVY 286
AR + ++APE +F + + +SDV+S+G+++ E+ N G+ +S+
Sbjct: 223 KG--NARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-- 275
Query: 287 FPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGS 346
Y+ V+ + P + I + C P+ RP ++ LQ
Sbjct: 276 ----FYKLVKDGYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQEQ 324
Query: 347 TE 348
+
Sbjct: 325 AQ 326
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 42/271 (15%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
N L++EF+ + + T P ++ + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH--- 120
Query: 188 STKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSR 247
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 121 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL-L 176
Query: 248 NFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVV 307
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGVT 232
Query: 308 TRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 233 SMPDYKPS-----FPKWARQDFSKVVPPLDE 258
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 92
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 93 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 144
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 145 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----YRAPELI- 199
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 200 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 240
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 139
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----YRAPELI- 194
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 195 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 121
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 122 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 173
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 174 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----YRAPELI- 228
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 229 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 269
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 42/271 (15%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
N L++EF+ + + T P ++ + + +GL + H
Sbjct: 71 DVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH--- 122
Query: 188 STKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSR 247
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL-L 178
Query: 248 NFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVV 307
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGVT 234
Query: 308 TRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 235 SMPDYKPS-----FPKWARQDFSKVVPPLDE 260
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 28/198 (14%)
Query: 91 LGQGGFGGVY---------KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI-- 139
LGQG FG V+ +L V + A++ V +E N+ ++
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 140 -YEFMPNGSLE---KFVYNGDT----SKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
Y F G L F+ GD SK + E + + +A L++LH S I
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE-EDVKFYLAELALALDHLH---SLGI 147
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGE 251
++ D+KP NILLDE+ K++DFGL+K E S G + Y+APEV +R G
Sbjct: 148 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGT---VEYMAPEVVNRR-GH 203
Query: 252 VSHKSDVYSFGMMIMELV 269
+ +D +SFG+++ E++
Sbjct: 204 -TQSADWWSFGVLMFEML 220
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G +D EV+ + H NV+TL + LI E + G L F+ ++
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--- 110
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ E + I G+ YLH S +I HFD+KP NI+L + P KI DFGL
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A K + G ++APE+ N+ + ++D++S G++
Sbjct: 165 AH----KIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 51/221 (23%)
Query: 91 LGQGGFGGVYKGR------------------LLDDFVNEVASISRTSHVNVVTLLGFCLE 132
LGQG FG V K R L ++EV ++ +H VV LE
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 133 GNN----------RALIY---EFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N ++ ++ E+ N +L +++ + ++ + ++ + + I +
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQ-----QRDEYWRLFRQILEA 128
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV-----------S 228
L Y+H S I+H ++KP NI +DE KI DFGLAK I+
Sbjct: 129 LSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 229 SLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+L A G Y+A EV G + K D YS G++ E +
Sbjct: 186 NLTSAIGTAXYVATEVLD-GTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G +D EV+ + H NV+TL + LI E + G L F+ ++
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--- 110
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ E + I G+ YLH S +I HFD+KP NI+L + P KI DFGL
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A K + G ++APE+ N+ + ++D++S G++
Sbjct: 165 AH----KIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 125
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 126 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 177
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 178 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----YRAPELI- 232
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 233 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 273
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 120 HVNVVTLLGFCLEG-NNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H + L + E + L+ M G + +YN D P + + I
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIVS 300
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIG 238
GLE+LH I++ D+KP N+LLD+D +ISD GLA K G + G G G
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKT-KGYAGTPG 354
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 273
++APE+ E D ++ G+ + E++ +
Sbjct: 355 FMAPELLLGE--EYDFSVDYFALGVTLYEMIAARG 387
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G +D EV+ + H NV+TL + LI E + G L F+ ++
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--- 110
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ E + I G+ YLH S +I HFD+KP NI+L + P KI DFGL
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A K + G ++APE+ N+ + ++D++S G++
Sbjct: 165 AH----KIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 87 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 138
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +S
Sbjct: 139 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 195
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 196 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 230
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 120 HVNVVTLLGFCLEG-NNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H + L + E + L+ M G + +YN D P + + I
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIVS 300
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIG 238
GLE+LH I++ D+KP N+LLD+D +ISD GLA K G + G G G
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKT-KGYAGTPG 354
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 273
++APE+ E D ++ G+ + E++ +
Sbjct: 355 FMAPELLLGE--EYDFSVDYFALGVTLYEMIAARG 387
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 123
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 124 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 175
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 176 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----YRAPELI- 230
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 231 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 271
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 120 HVNVVTLLGFCLEG-NNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H + L + E + L+ M G + +YN D P + + I
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIVS 300
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIG 238
GLE+LH I++ D+KP N+LLD+D +ISD GLA K G + G G G
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKT-KGYAGTPG 354
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 273
++APE+ E D ++ G+ + E++ +
Sbjct: 355 FMAPELLLGE--EYDFSVDYFALGVTLYEMIAARG 387
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 42/209 (20%)
Query: 91 LGQGGFGGVYKGR-----------LLDDFVNEVASISR--------TSHVNVVTLLGFCL 131
+G G +G VYKGR ++D +E I + + H N+ T G +
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 132 EGN------NRALIYEFMPNGSLEKFVYN--GDTSKPCQYLRWEKMYEIVIGIAKGLEYL 183
+ N L+ EF GS+ + N G+T L+ E + I I +GL +L
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT------LKEEWIAYICREILRGLSHL 145
Query: 184 HHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
H K++H DIK N+LL E+ K+ DFG++ G ++ +G ++APE
Sbjct: 146 HQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGT---PYWMAPE 199
Query: 244 VFSRNF---GEVSHKSDVYSFGMMIMELV 269
V + + KSD++S G+ +E+
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMA 228
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 91 LGQGGFGGVYKGRLLDD--------------FVN-EVASISRTSHVNVVTLLGFCLEGNN 135
+G G FG VY+ +L D F N E+ + + H N+V L F
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 166
Query: 136 RA------LIYEFMPNG--SLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
+ L+ +++P + + + P Y++ MY++ + L Y+H
Sbjct: 167 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF----RSLAYIH--- 218
Query: 188 STKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S I H DIKP N+LLD D K+ DFG AK E VS + Y APE+
Sbjct: 219 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----YRAPELI- 273
Query: 247 RNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG + S DV+S G ++ EL+ + DSGVD E+
Sbjct: 274 --FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 314
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 120 HVNVVTLLGFCLEG-NNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H + L + E + L+ M G + +YN D P + + I
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIVS 300
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIG 238
GLE+LH I++ D+KP N+LLD+D +ISD GLA K G + G G G
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKT-KGYAGTPG 354
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 273
++APE+ E D ++ G+ + E++ +
Sbjct: 355 FMAPELLLGE--EYDFSVDYFALGVTLYEMIAARG 387
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G +D EV+ + H NV+TL + LI E + G L F+ ++
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--- 110
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ E + I G+ YLH S +I HFD+KP NI+L + P KI DFGL
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A K + G ++APE+ N+ + ++D++S G++
Sbjct: 165 AH----KIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 83 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 134
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +S
Sbjct: 135 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 191
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 192 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 226
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 33/202 (16%)
Query: 90 KLGQGGFGGVYKGR-------------------LLDDFVNEVASISRTSHVNVVTLLGFC 130
+LG G FG VYK + L+D++ E+ ++ H N+V LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 131 LEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTK 190
NN ++ EF G+++ + + +P L ++ + L YLH K
Sbjct: 104 YYENNLWILIEFCAGGAVDAVML--ELERP---LTESQIQVVCKQTLDALNYLH---DNK 155
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVF---SR 247
I+H D+K NIL D K++DFG++ T +G ++APEV +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTP---YWMAPEVVMCETS 212
Query: 248 NFGEVSHKSDVYSFGMMIMELV 269
+K+DV+S G+ ++E+
Sbjct: 213 KDRPYDYKADVWSLGITLIEMA 234
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 33/239 (13%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY-------- 170
+H+N+V LLG C G +I E+ G L F+ S C M
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 171 ----EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+AKG+ +L S +H D+ NILL KI DFGLA+
Sbjct: 168 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNY 224
Query: 227 VSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
V AR + ++APE +F+ + + +SDV+S+G+ + EL ++ G+ S+
Sbjct: 225 VVK-GNARLPVKWMAPESIFNCVY---TFESDVWSYGIFLWELFSLGSSPYPGMPVDSK- 279
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
Y+ +++ P + +I K C A P RP +++++++
Sbjct: 280 -----FYKMIKEGFRMLSPEHAPAEMYDIMKT-------CWDADPLKRPTFKQIVQLIE 326
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 28/198 (14%)
Query: 91 LGQGGFGGVY---------KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI-- 139
LGQG FG V+ +L V + A++ V +E N+ ++
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 140 -YEFMPNGSLE---KFVYNGDT----SKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
Y F G L F+ GD SK + E + + +A L++LH S I
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE-EDVKFYLAELALALDHLH---SLGI 147
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGE 251
++ D+KP NILLDE+ K++DFGL+K E S G + Y+APEV +R G
Sbjct: 148 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGT---VEYMAPEVVNRR-GH 203
Query: 252 VSHKSDVYSFGMMIMELV 269
+ +D +SFG+++ E++
Sbjct: 204 -TQSADWWSFGVLMFEML 220
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 33/239 (13%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY-------- 170
+H+N+V LLG C G +I E+ G L F+ S C M
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 171 ----EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+AKG+ +L S +H D+ NILL KI DFGLA+
Sbjct: 145 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201
Query: 227 VSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
V AR + ++APE +F+ + + +SDV+S+G+ + EL ++ G+ S+
Sbjct: 202 VVK-GNARLPVKWMAPESIFNCVY---TFESDVWSYGIFLWELFSLGSSPYPGMPVDSK- 256
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
Y+ +++ P + +I K C A P RP +++++++
Sbjct: 257 -----FYKMIKEGFRMLSPEHAPAEMYDIMKT-------CWDADPLKRPTFKQIVQLIE 303
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 28/198 (14%)
Query: 91 LGQGGFGGVY---------KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI-- 139
LGQG FG V+ +L V + A++ V +E N+ ++
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 140 -YEFMPNGSLE---KFVYNGDT----SKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
Y F G L F+ GD SK + E + + +A L++LH S I
Sbjct: 93 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE-EDVKFYLAELALALDHLH---SLGI 148
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGE 251
++ D+KP NILLDE+ K++DFGL+K E S G + Y+APEV +R G
Sbjct: 149 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGT---VEYMAPEVVNRR-GH 204
Query: 252 VSHKSDVYSFGMMIMELV 269
+ +D +SFG+++ E++
Sbjct: 205 -TQSADWWSFGVLMFEML 221
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 98/240 (40%), Gaps = 31/240 (12%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGD---TSKPC-----QYLRWEKMY 170
H N+V LLG C G +I E+ G L F+ + P L +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAK-LCTTKEGIVSS 229
+A+G+ +L S +H D+ N+LL KI DFGLA+ + IV
Sbjct: 168 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 230 LLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFP 288
AR + ++APE +F + + +SDV+S+G+++ E+ N G+ +S+
Sbjct: 225 --NARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWEIFSLGLNPYPGILVNSK---- 275
Query: 289 HWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQGSTE 348
Y+ V+ + P + I + C P+ RP ++ LQ +
Sbjct: 276 --FYKLVKDGYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQEQAQ 326
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G +D EV+ + H NV+TL + LI E + G L F+ ++
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES--- 110
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ E + I G+ YLH S +I HFD+KP NI+L + P KI DFGL
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A K + G ++APE+ N+ + ++D++S G++
Sbjct: 165 AH----KIDFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 33/239 (13%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY-------- 170
+H+N+V LLG C G +I E+ G L F+ S C M
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 171 ----EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+AKG+ +L S +H D+ NILL KI DFGLA+
Sbjct: 168 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 224
Query: 227 VSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
V AR + ++APE +F+ + + +SDV+S+G+ + EL ++ G+ S+
Sbjct: 225 VVK-GNARLPVKWMAPESIFNCVY---TFESDVWSYGIFLWELFSLGSSPYPGMPVDSK- 279
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
Y+ +++ P + +I K C A P RP +++++++
Sbjct: 280 -----FYKMIKEGFRMLSPEHAPAEMYDIMKT-------CWDADPLKRPTFKQIVQLIE 326
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++E + + L+KF+ + T P ++ + + +GL + H
Sbjct: 72 DVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 123
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 124 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYXHEVVTLWYRAPEIL- 178
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 234
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 235 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 261
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 33/239 (13%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY-------- 170
+H+N+V LLG C G +I E+ G L F+ S C M
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 171 ----EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+AKG+ +L S +H D+ NILL KI DFGLA+
Sbjct: 163 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 219
Query: 227 VSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
V AR + ++APE +F+ + + +SDV+S+G+ + EL ++ G+ S+
Sbjct: 220 VVK-GNARLPVKWMAPESIFNCVY---TFESDVWSYGIFLWELFSLGSSPYPGMPVDSK- 274
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
Y+ +++ P + +I K C A P RP +++++++
Sbjct: 275 -----FYKMIKEGFRMLSPEHAPAEMYDIMKT-------CWDADPLKRPTFKQIVQLIE 321
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 100/249 (40%), Gaps = 40/249 (16%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN------GDTSKPCQY--------- 163
H N+V LLG C G +I E+ G L F+ G + P Q
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 164 --LRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAK-LC 220
L + +A+G+ +L S +H D+ N+LL KI DFGLA+ +
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 221 TTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGV 279
IV AR + ++APE +F + + +SDV+S+G+++ E+ N G+
Sbjct: 210 NDSNYIVKG--NARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWEIFSLGLNPYPGI 264
Query: 280 DSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
+S+ Y+ V+ + P + I + C P+ RP ++
Sbjct: 265 LVNSK------FYKLVKDGYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQI 311
Query: 340 IEMLQGSTE 348
LQ +
Sbjct: 312 CSFLQEQAQ 320
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 102/257 (39%), Gaps = 26/257 (10%)
Query: 103 RLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRA--LIYEFMPNGSLEKFVYNGDTSKP 160
+L + E+ + H ++V G C + ++ L+ E++P GSL ++ P
Sbjct: 53 QLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-------P 105
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
+ ++ I +G+ YLH + +H + N+LLD D KI DFGLAK
Sbjct: 106 RHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV 162
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG-CKNNLDSGV 279
+ + APE + + SDV+SFG+ + EL+ C +N
Sbjct: 163 PEGHEYYRVREDGDSPVFWYAPECLKEC--KFYYASDVWSFGVTLYELLTYCDSN----- 215
Query: 280 DSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLW-----CIQARPSDRP 334
S F I Q +L ++ R E ++ C + S RP
Sbjct: 216 -QSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRP 274
Query: 335 PMNEVIEMLQGSTEALQ 351
++ +LQ + E Q
Sbjct: 275 TFQNLVPILQTAQEKYQ 291
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 95/206 (46%), Gaps = 24/206 (11%)
Query: 72 LKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRLLDDF-VNEVASISRTSHVNVVTLLGFC 130
L R +F +V ++ KDK Q GF K L+ F V E+ + + S +V L G
Sbjct: 80 LGRGSFGEVHRM----KDK--QTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAV 133
Query: 131 LEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTK 190
EG + E + GSL + + K L ++ + +GLEYLH + +
Sbjct: 134 REGPWVNIFMELLEGGSLGQLI------KQMGCLPEDRALYYLGQALEGLEYLH---TRR 184
Query: 191 ILHFDIKPHNILLDEDFC-PKISDFGLAKLCTTKEGIVSSLLGARGIIG---YIAPEVFS 246
ILH D+K N+LL D + DFG A LC +G+ SLL I G ++APEV
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 243
Query: 247 RNFGEVSHKSDVY-SFGMMIMELVGC 271
K D++ S MM+ L GC
Sbjct: 244 GK--PCDAKVDIWSSCCMMLHMLNGC 267
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 102/257 (39%), Gaps = 26/257 (10%)
Query: 103 RLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRA--LIYEFMPNGSLEKFVYNGDTSKP 160
+L + E+ + H ++V G C + ++ L+ E++P GSL ++ P
Sbjct: 52 QLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-------P 104
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
+ ++ I +G+ YLH + +H + N+LLD D KI DFGLAK
Sbjct: 105 RHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV 161
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG-CKNNLDSGV 279
+ + APE + + SDV+SFG+ + EL+ C +N
Sbjct: 162 PEGHEYYRVREDGDSPVFWYAPECLKEC--KFYYASDVWSFGVTLYELLTYCDSN----- 214
Query: 280 DSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLW-----CIQARPSDRP 334
S F I Q +L ++ R E ++ C + S RP
Sbjct: 215 -QSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRP 273
Query: 335 PMNEVIEMLQGSTEALQ 351
++ +LQ + E Q
Sbjct: 274 TFQNLVPILQTAQEKYQ 290
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 33/239 (13%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY-------- 170
+H+N+V LLG C G +I E+ G L F+ S C M
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 171 ----EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+AKG+ +L S +H D+ NILL KI DFGLA+
Sbjct: 161 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 217
Query: 227 VSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
V AR + ++APE +F+ + + +SDV+S+G+ + EL ++ G+ S+
Sbjct: 218 VVK-GNARLPVKWMAPESIFNCVY---TFESDVWSYGIFLWELFSLGSSPYPGMPVDSK- 272
Query: 286 YFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQ 344
Y+ +++ P + +I K C A P RP +++++++
Sbjct: 273 -----FYKMIKEGFRMLSPEHAPAEMYDIMKT-------CWDADPLKRPTFKQIVQLIE 319
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 84 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 135
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ ++
Sbjct: 136 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF 192
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 193 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 227
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 91 LGQGGFGGV---YKGRLLDDFVNEVASISRTSHVNV------VTLLGFCLEGNNRALIYE 141
+G G +G V Y RL + S S ++ + LL N L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 142 FMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
F P S+E F VY D + CQ L E + +V + +GL+Y+H S I
Sbjct: 88 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---SAGI 144
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGE 251
+H D+KP N+ ++ED +I DFGLA+ + + G Y APE+ N+
Sbjct: 145 IHRDLKPSNVAVNEDCELRILDFGLARQADEE------MTGYVATRWYRAPEIM-LNWMH 197
Query: 252 VSHKSDVYSFGMMIMELVGCK 272
+ D++S G ++ EL+ K
Sbjct: 198 YNQTVDIWSVGCIMAELLQGK 218
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 108 FVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWE 167
+ EVA + H N++ L F + N L+ E G L + +++
Sbjct: 83 LLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL--------FDEIIHRMKFN 134
Query: 168 KMYEIVI--GIAKGLEYLHHGCSTKILHFDIKPHNILL---DEDFCPKISDFGLAKLCTT 222
++ VI + G+ YLH I+H D+KP N+LL ++D KI DFGL+ +
Sbjct: 135 EVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191
Query: 223 KEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
++ + L G YIAPEV + + E K DV+S G+++ L+
Sbjct: 192 QKKMKERL----GTAYYIAPEVLRKKYDE---KCDVWSIGVILFILLA 232
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 137
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +
Sbjct: 138 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + S SD+++ G +I +LV
Sbjct: 195 VGT---AQYVSPELLTEKSAXKS--SDLWALGCIIYQLVA 229
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 91 LGQGGFGGV---YKGRLLDDFVNEVASISRTSHVNV------VTLLGFCLEGNNRALIYE 141
+G G +G V Y RL + S S ++ + LL N L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 142 FMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
F P S+E F VY D + CQ L E + +V + +GL+Y+H S I
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---SAGI 152
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGE 251
+H D+KP N+ ++ED +I DFGLA+ + + G Y APE+ N+
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLARQADEE------MTGYVATRWYRAPEIM-LNWMH 205
Query: 252 VSHKSDVYSFGMMIMELVGCK 272
+ D++S G ++ EL+ K
Sbjct: 206 YNQTVDIWSVGCIMAELLQGK 226
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 29/211 (13%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 89 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 140
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +
Sbjct: 141 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 197
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHW 290
+G Y++PE+ + SD+++ G +I +LV +G + +
Sbjct: 198 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVAGLPPFRAGNE--------YL 244
Query: 291 IYRHVEQDREFKLPGVVTRKENEIAKKMIIV 321
I++ + + E+ P K ++ +K++++
Sbjct: 245 IFQKIIK-LEYDFPAAFFPKARDLVEKLLVL 274
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 37/243 (15%)
Query: 89 DKLGQGGFGGVYKGR--LLDDFV------------------NEVASISRTSHVNVVTLLG 128
DKLG+G + VYKG+ L D+ V EV+ + H N+VTL
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCS 188
+ L++E++ + L++++ D + K++ + + +GL Y H
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYL---DDCGNIINMHNVKLF--LFQLLRGLAYCHR--- 118
Query: 189 TKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRN 248
K+LH D+KP N+L++E K++DFGLA+ + I + + + P
Sbjct: 119 QKVLHRDLKPQNLLINERGELKLADFGLAR----AKSIPTKTYDNEVVTLWYRPPDILLG 174
Query: 249 FGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVT 308
+ S + D++ G + E+ + L G ++ H+I+R + E PG+++
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGR-PLFPGSTVEEQL---HFIFRILGTPTEETWPGILS 230
Query: 309 RKE 311
+E
Sbjct: 231 NEE 233
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 78 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 125
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 126 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 180
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ G Y APE+ N+ + D++S G ++ EL+
Sbjct: 181 ----HTADEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 224
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 78 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 125
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 126 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 180
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ G Y APE+ N+ + D++S G ++ EL+
Sbjct: 181 ----HTADEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 224
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 78 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 125
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 126 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 180
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ G Y APE+ N+ + D++S G ++ EL+
Sbjct: 181 ----HTADEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 224
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 78/184 (42%), Gaps = 30/184 (16%)
Query: 101 KGRLLDD----------FVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEK 150
KGR DD NE++ + H N++ L + L+ EF G L +
Sbjct: 76 KGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFE 135
Query: 151 FVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDED---F 207
+ N C I+ I G+ YLH I+H DIKP NILL+
Sbjct: 136 QIINRHKFDECD------AANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLL 186
Query: 208 CPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIME 267
KI DFGL+ + + L G YIAPEV + + E K DV+S G +IM
Sbjct: 187 NIKIVDFGLSSFFSKDYKLRDRL----GTAYYIAPEVLKKKYNE---KCDVWSCG-VIMY 238
Query: 268 LVGC 271
++ C
Sbjct: 239 ILLC 242
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 39/203 (19%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G F GVY+ ++ NEV + H +++ L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP-CQYLRWEKMYEIVIGIAKGLEYLH-HG 186
+ + N L+ E NG + +++ N KP + M++I+ G+ YLH HG
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYLKN--RVKPFSENEARHFMHQIITGML----YLHSHG 132
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
ILH D+ N+LL + KI+DFGLA +L G YI+PE+ +
Sbjct: 133 ----ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTP---NYISPEIAT 185
Query: 247 RNFGEVSHKSDVYSFGMMIMELV 269
R+ + +SDV+S G M L+
Sbjct: 186 RSAHGL--ESDVWSLGCMFYTLL 206
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 33/203 (16%)
Query: 90 KLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTS---HVNVVT 125
++G G +G VYK R L V EVA + R H NVV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 126 LLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
L+ C I + +++ + P L E + +++ +GL++LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVF 245
C I+H D+KP NIL+ K++DFGLA++ + + + ++ + Y APEV
Sbjct: 131 NC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV----TLWYRAPEVL 183
Query: 246 SRNFGEVSHKSDVYSFGMMIMEL 268
++ + D++S G + E+
Sbjct: 184 LQS--TYATPVDMWSVGCIFAEM 204
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 76 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 123
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 124 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHT 180
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 181 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 222
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 63 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 114
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +
Sbjct: 115 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 172 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 206
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 82 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 129
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 130 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHT 186
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ G Y APE+ N+ + D++S G ++ EL+
Sbjct: 187 D------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 228
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 76 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 123
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 124 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHT 180
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 181 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 222
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 61 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 112
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +
Sbjct: 113 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 170 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 204
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 74 RYNFSDVKKLTNSFKDKLGQGGFGGVYKGRLLDDF-VNEVASISRTSHVNVVTLLGFCLE 132
R +F +V ++ KDK Q GF K L+ F V E+ + + S +V L G E
Sbjct: 68 RGSFGEVHRM----KDK--QTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVRE 121
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
G + E + GSL + + K L ++ + +GLEYLH + +IL
Sbjct: 122 GPWVNIFMELLEGGSLGQLI------KQMGCLPEDRALYYLGQALEGLEYLH---TRRIL 172
Query: 193 HFDIKPHNILLDEDFC-PKISDFGLAKLCTTKEGIVSSLLGARGIIG---YIAPEVFSRN 248
H D+K N+LL D + DFG A LC +G+ SLL I G ++APEV
Sbjct: 173 HGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231
Query: 249 FGEVSHKSDVY-SFGMMIMELVGC 271
K D++ S MM+ L GC
Sbjct: 232 --PCDAKVDIWSSCCMMLHMLNGC 253
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 62 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 113
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +
Sbjct: 114 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 170
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 171 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 205
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 64 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 115
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +
Sbjct: 116 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 173 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 207
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 91/211 (43%), Gaps = 43/211 (20%)
Query: 79 DVKKLTNSFKDKLGQGGFGGVY------KGRLL--------------DDFVNEVASISRT 118
D+KK+ FK+ LG G F V G+L NE+A + +
Sbjct: 19 DIKKIFE-FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI 77
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNG-DTSKPCQYLRWEKMYEIVIGI 176
H N+V L N+ L+ + + G L ++ V G T K L + +
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTL--------IRQV 129
Query: 177 AKGLEYLHHGCSTKILHFDIKPHNILL---DEDFCPKISDFGLAKLCTTKEGIVSSLLGA 233
+ YLH I+H D+KP N+L DE+ ISDFGL+K+ EG + A
Sbjct: 130 LDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM----EGKGDVMSTA 182
Query: 234 RGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
G GY+APEV ++ S D +S G++
Sbjct: 183 CGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 211
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 74 RYNFSDVKKLTNSFKDKLGQGGFGGVYKGRLLDDF-VNEVASISRTSHVNVVTLLGFCLE 132
R +F +V ++ KDK Q GF K L+ F V E+ + + S +V L G E
Sbjct: 84 RGSFGEVHRM----KDK--QTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVRE 137
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
G + E + GSL + + K L ++ + +GLEYLH + +IL
Sbjct: 138 GPWVNIFMELLEGGSLGQLI------KQMGCLPEDRALYYLGQALEGLEYLH---TRRIL 188
Query: 193 HFDIKPHNILLDEDFC-PKISDFGLAKLCTTKEGIVSSLLGARGIIG---YIAPEVFSRN 248
H D+K N+LL D + DFG A LC +G+ SLL I G ++APEV
Sbjct: 189 HGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 247
Query: 249 FGEVSHKSDVY-SFGMMIMELVGC 271
K D++ S MM+ L GC
Sbjct: 248 --PCDAKVDIWSSCCMMLHMLNGC 269
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 83/205 (40%), Gaps = 36/205 (17%)
Query: 91 LGQGGFGGVYKGRL------------------LDDFVNEVASISRTSHVNVVTLLGFCLE 132
+G+G FG VY GR L F EV + +T H NVV +G C+
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKIL 192
+ A+I +L V + L K +I I KG+ YLH + IL
Sbjct: 101 PPHLAIITSLCKGRTLYSVVRDAKI-----VLDVNKTRQIAQEIVKGMGYLH---AKGIL 152
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEG--IVSSLLGARGIIGYIAPEVFSRNFG 250
H D+K N+ D I+DFGL + + L G + ++APE+ +
Sbjct: 153 HKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSP 211
Query: 251 EV-------SHKSDVYSFGMMIMEL 268
+ S SDV++ G + EL
Sbjct: 212 DTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 137
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +
Sbjct: 138 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 195 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 229
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 D------DEMTGXVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 137
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +
Sbjct: 138 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 195 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 229
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 87 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 138
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +
Sbjct: 139 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 195
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 196 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 84 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 135
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +
Sbjct: 136 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 193 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 227
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 91 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 138
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 139 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 195
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 196 DDE------MXGXVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 237
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 84 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 135
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +
Sbjct: 136 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 193 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 227
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 84 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 135
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +
Sbjct: 136 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 193 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 227
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 31/179 (17%)
Query: 172 IVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL- 230
I I IA+ +E+LH S ++H D+KP NI D K+ DFGL E + L
Sbjct: 169 IFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 231 --------LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSS 282
G G Y++PE N SHK D++S G+++ EL+ + V
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGN--NYSHKVDIFSLGLILFELLYSFSTQMERVRII 283
Query: 283 SEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
++V R K P + T+K + + M++ + + P++RP ++IE
Sbjct: 284 TDV-------------RNLKFPLLFTQKYPQ--EHMMVQDM--LSPSPTERPEATDIIE 325
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 137
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +
Sbjct: 138 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 195 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 229
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 83 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 134
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +
Sbjct: 135 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 191
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 192 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 226
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 68 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 119
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +
Sbjct: 120 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 176
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 177 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 211
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G ++ EV+ + + H N++TL + LI E + G L F+ ++
Sbjct: 55 RGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES--- 111
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ + I G+ YLH + KI HFD+KP NI+L + P K+ DFGL
Sbjct: 112 ---LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A ++G+ G ++APE+ N+ + ++D++S G++
Sbjct: 166 AH--EIEDGV--EFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 115 ISRTSHVNVVTLLGFCLEGNNRALI-YEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEI 172
+SR H V L F + + + + NG L K++ G + C + Y
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFY-- 137
Query: 173 VIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT--TKEGIVSSL 230
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +K+ +
Sbjct: 138 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+G Y++PE+ + SD+++ G +I +LV
Sbjct: 195 VGT---AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 229
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 33/203 (16%)
Query: 90 KLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTS---HVNVVT 125
++G G +G VYK R L V EVA + R H NVV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 126 LLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
L+ C I + +++ + P L E + +++ +GL++LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVF 245
C I+H D+KP NIL+ K++DFGLA++ + + + ++ + Y APEV
Sbjct: 131 NC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV----TLWYRAPEVL 183
Query: 246 SRNFGEVSHKSDVYSFGMMIMEL 268
++ + D++S G + E+
Sbjct: 184 LQS--TYATPVDMWSVGCIFAEM 204
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G ++ EV+ + + H NV+TL + LI E + G L F+ ++
Sbjct: 55 RGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--- 111
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ + I G+ YLH + KI HFD+KP NI+L + P K+ DFGL
Sbjct: 112 ---LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A ++G+ G ++APE+ N+ + ++D++S G++
Sbjct: 166 AH--EIEDGV--EFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 77 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 124
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 125 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHT 181
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 182 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 223
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 81 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 128
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 129 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 185
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 186 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 227
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 73 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 120
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 121 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHT 177
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 178 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 219
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G ++ EV+ + + H NV+TL + LI E + G L F+ ++
Sbjct: 55 RGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--- 111
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ + I G+ YLH + KI HFD+KP NI+L + P K+ DFGL
Sbjct: 112 ---LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A ++G+ G ++APE+ N+ + ++D++S G++
Sbjct: 166 AH--EIEDGV--EFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 76 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 123
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 124 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 180
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 181 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 D------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 70 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 117
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 118 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 174
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 175 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 216
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 36/203 (17%)
Query: 91 LGQGGFGGVYKGRL--------------------LDD---FVNEVASISRTSHVNVVTLL 127
LG+G FG VY+G LD+ F++E + H ++V L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
G +E +I E P G L ++ S L+ + + I K + YL
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYLERNKNS-----LKVLTLVLYSLQICKAMAYLE--- 126
Query: 188 STKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSR 247
S +H DI NIL+ C K+ DFGL++ ++ +S+ R I +++PE S
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV--TRLPIKWMSPE--SI 182
Query: 248 NFGEVSHKSDVYSFGMMIMELVG 270
NF + SDV+ F + + E++
Sbjct: 183 NFRRFTTASDVWMFAVCMWEILS 205
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 39/205 (19%)
Query: 90 KLGQGGFGGVYKGR-------------------LLDDFVNEVASISRTSHVNVVTLLGFC 130
+LG G FG VYK + L+D++ E+ ++ H +V LLG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 131 LEGNNRALIYEFMPNGSLEKFVYNGDT--SKPCQYLRWEKMYEIVIGIAKGLEYLHHGCS 188
++ EF P G+++ + D ++P + +M E L +LH S
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE-------ALNFLH---S 135
Query: 189 TKILHFDIKPHNILLDEDFCPKISDFGL-AKLCTTKEGIVSSLLGARGIIGYIAPEVF-- 245
+I+H D+K N+L+ + +++DFG+ AK T + S + G ++APEV
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI----GTPYWMAPEVVMC 191
Query: 246 -SRNFGEVSHKSDVYSFGMMIMELV 269
+ +K+D++S G+ ++E+
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEMA 216
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 83 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 130
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 131 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 187
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 188 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 229
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 83 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 130
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 131 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 187
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 188 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 229
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 73 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 120
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 121 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 177
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 178 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 219
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 73 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 120
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 121 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 177
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 178 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 219
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G ++ EV+ + + H NV+TL + LI E + G L F+ ++
Sbjct: 55 RGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--- 111
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ + I G+ YLH + KI HFD+KP NI+L + P K+ DFGL
Sbjct: 112 ---LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A ++G+ G ++APE+ N+ + ++D++S G++
Sbjct: 166 AH--EIEDGV--EFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G ++ EV+ + + H NV+TL + LI E + G L F+ ++
Sbjct: 55 RGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--- 111
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ + I G+ YLH + KI HFD+KP NI+L + P K+ DFGL
Sbjct: 112 ---LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A ++G+ G ++APE+ N+ + ++D++S G++
Sbjct: 166 AH--EIEDGV--EFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 83 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 130
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 131 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 187
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 188 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 229
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 73 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 120
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 121 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 177
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 178 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 78 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 125
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 126 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 182
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ G Y APE+ N+ + D++S G ++ EL+
Sbjct: 183 D------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 224
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
+G ++ EV+ + + H NV+TL + LI E + G L F+ ++
Sbjct: 55 RGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--- 111
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGL 216
L E+ + I G+ YLH + KI HFD+KP NI+L + P K+ DFGL
Sbjct: 112 ---LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
A ++G+ G ++APE+ N+ + ++D++S G++
Sbjct: 166 AH--EIEDGV--EFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 76 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 123
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 124 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 180
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 181 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 94 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 141
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 142 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 198
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 199 DDE------MXGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 240
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 39/205 (19%)
Query: 90 KLGQGGFGGVYKGR-------------------LLDDFVNEVASISRTSHVNVVTLLGFC 130
+LG G FG VYK + L+D++ E+ ++ H +V LLG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 131 LEGNNRALIYEFMPNGSLEKFVYNGDT--SKPCQYLRWEKMYEIVIGIAKGLEYLHHGCS 188
++ EF P G+++ + D ++P + +M E L +LH S
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE-------ALNFLH---S 127
Query: 189 TKILHFDIKPHNILLDEDFCPKISDFGL-AKLCTTKEGIVSSLLGARGIIGYIAPEVF-- 245
+I+H D+K N+L+ + +++DFG+ AK T + S + G ++APEV
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI----GTPYWMAPEVVMC 183
Query: 246 -SRNFGEVSHKSDVYSFGMMIMELV 269
+ +K+D++S G+ ++E+
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEMA 208
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 68 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 115
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 116 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 172
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ G Y APE+ N+ + D++S G ++ EL+
Sbjct: 173 D------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 214
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 82 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 129
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 130 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 186
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ G Y APE+ N+ + D++S G ++ EL+
Sbjct: 187 D------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 228
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 D------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 77 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 124
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 125 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 181
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 182 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 223
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 69 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 116
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 117 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 173
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 174 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 215
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 90 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 137
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 138 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 194
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 195 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 236
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 36/203 (17%)
Query: 91 LGQGGFGGVYKGRL--------------------LDD---FVNEVASISRTSHVNVVTLL 127
LG+G FG VY+G LD+ F++E + H ++V L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
G +E +I E P G L ++ S L+ + + I K + YL
Sbjct: 92 GI-IEEEPTWIIMELYPYGELGHYLERNKNS-----LKVLTLVLYSLQICKAMAYLE--- 142
Query: 188 STKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSR 247
S +H DI NIL+ C K+ DFGL++ ++ +S+ R I +++PE S
Sbjct: 143 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV--TRLPIKWMSPE--SI 198
Query: 248 NFGEVSHKSDVYSFGMMIMELVG 270
NF + SDV+ F + + E++
Sbjct: 199 NFRRFTTASDVWMFAVCMWEILS 221
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 67 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 114
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 115 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 171
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ G Y APE+ N+ + D++S G ++ EL+
Sbjct: 172 D------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 213
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 90 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 137
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 138 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 194
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 195 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 236
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 67 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 114
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 115 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 171
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ G Y APE+ N+ + D++S G ++ EL+
Sbjct: 172 D------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 14/162 (8%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRAL--IYEFMPNGSLEKFVYNGDTSKPCQYLRWE 167
E+ + H +++ G C + ++L + E++P GSL ++ P +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-------PRHSIGLA 117
Query: 168 KMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV 227
++ I +G+ YLH S +H ++ N+LLD D KI DFGLAK
Sbjct: 118 QLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + APE + + SDV+SFG+ + EL+
Sbjct: 175 RVREDGDSPVFWYAPECLKEY--KFYYASDVWSFGVTLYELL 214
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 68 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 115
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 116 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 172
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ G Y APE+ N+ + D++S G ++ EL+
Sbjct: 173 D------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 214
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 91 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 138
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 139 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 195
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 196 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 237
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 94 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 141
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 142 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 198
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 199 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 240
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 91 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 138
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 139 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 195
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 196 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 237
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 77 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 124
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 125 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 181
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 182 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 223
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 36/206 (17%)
Query: 90 KLGQGGFGGVYKGR------------------------LLDDFVNEVASISRTS---HVN 122
++G G +G VYK R L V EVA + R H N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 123 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 182
VV L+ C I + +++ + P L E + +++ +GL++
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 135
Query: 183 LHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAP 242
LH C I+H D+KP NIL+ K++DFGLA++ + + + ++ + Y AP
Sbjct: 136 LHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV----TLWYRAP 188
Query: 243 EVFSRNFGEVSHKSDVYSFGMMIMEL 268
EV ++ + D++S G + E+
Sbjct: 189 EVLLQS--TYATPVDMWSVGCIFAEM 212
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 44/215 (20%)
Query: 91 LGQGGFGGVYKG-----------------------RLLDDFVNEVASISRTSHVNVVTLL 127
+G+G FG V++G + + F+ E ++ + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
G E N +I E G L F+ S L + ++ L YL
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKFS-----LDLASLILYAYQLSTALAYLE--- 128
Query: 188 STKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSR 247
S + +H DI N+L+ + C K+ DFGL++ +S + I ++APE S
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKAS--KGKLPIKWMAPE--SI 184
Query: 248 NFGEVSHKSDVYSFGMMIMELV--------GCKNN 274
NF + SDV+ FG+ + E++ G KNN
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRAL--IYEFMPNGSLEKFVYNGDTSKPCQYLRWE 167
E+ + H +++ G C + +L + E++P GSL ++ P +
Sbjct: 82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-------PRHSIGLA 134
Query: 168 KMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV 227
++ I +G+ YLH + +H D+ N+LLD D KI DFGLAK
Sbjct: 135 QLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXY 191
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + APE + + SDV+SFG+ + EL+
Sbjct: 192 RVREDGDSPVFWYAPECLKEY--KFYYASDVWSFGVTLYELL 231
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 36/203 (17%)
Query: 91 LGQGGFGGVYKGRL--------------------LDD---FVNEVASISRTSHVNVVTLL 127
LG+G FG VY+G LD+ F++E + H ++V L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
G +E +I E P G L ++ S L+ + + I K + YL
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYLERNKNS-----LKVLTLVLYSLQICKAMAYLE--- 130
Query: 188 STKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSR 247
S +H DI NIL+ C K+ DFGL++ ++ +S+ R I +++PE S
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV--TRLPIKWMSPE--SI 186
Query: 248 NFGEVSHKSDVYSFGMMIMELVG 270
NF + SDV+ F + + E++
Sbjct: 187 NFRRFTTASDVWMFAVCMWEILS 209
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 67 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 114
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 115 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 171
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 172 DDE------MAGFVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 213
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 77 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 124
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 125 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 181
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 182 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 223
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 DDE------MAGFVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 DDE------MAGFVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 52/219 (23%)
Query: 91 LGQGGFGGVYKG-----------------------RLLDDFVNEVASISRTSHVNVVTLL 127
+G+G FG V++G + + F+ E ++ + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV----YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYL 183
G E N +I E G L F+ Y+ D + Y ++ L YL
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILY---------AYQLSTALAYL 127
Query: 184 HHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
S + +H DI N+L+ + C K+ DFGL++ +S + I ++APE
Sbjct: 128 E---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS--KGKLPIKWMAPE 182
Query: 244 VFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNN 274
S NF + SDV+ FG+ + E++ G KNN
Sbjct: 183 --SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 52/219 (23%)
Query: 91 LGQGGFGGVYKG-----------------------RLLDDFVNEVASISRTSHVNVVTLL 127
+G+G FG V++G + + F+ E ++ + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV----YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYL 183
G E N +I E G L F+ Y+ D + Y ++ L YL
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILY---------AYQLSTALAYL 127
Query: 184 HHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
S + +H DI N+L+ + C K+ DFGL++ +S + I ++APE
Sbjct: 128 E---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS--KGKLPIKWMAPE 182
Query: 244 VFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNN 274
S NF + SDV+ FG+ + E++ G KNN
Sbjct: 183 --SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 70 LPLKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRLLDDF-VNEVASISRTSHVNVVTLLG 128
L L R +F +V ++ +DK Q GF K L+ F E+ + + + +V L G
Sbjct: 99 LRLGRGSFGEVHRM----EDK--QTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYG 152
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA-KGLEYLHHGC 187
EG + E + GSL + V Q E +G A +GLEYLH
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVKE-------QGCLPEDRALYYLGQALEGLEYLH--- 202
Query: 188 STKILHFDIKPHNILLDEDFC-PKISDFGLAKLCTTKEGIVSSLLGARGIIG---YIAPE 243
S +ILH D+K N+LL D + DFG A +C +G+ SLL I G ++APE
Sbjct: 203 SRRILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLGKSLLTGDYIPGTETHMAPE 261
Query: 244 -VFSRNFGEVSHKSDVY-SFGMMIMELVGC 271
V R+ K DV+ S MM+ L GC
Sbjct: 262 VVLGRS---CDAKVDVWSSCCMMLHMLNGC 288
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 33/203 (16%)
Query: 90 KLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTS---HVNVVT 125
++G G +G VYK R L V EVA + R H NVV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 126 LLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
L+ C I + +++ + P L E + +++ +GL++LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVF 245
C I+H D+KP NIL+ K++DFGLA++ + + + ++ + Y APEV
Sbjct: 131 NC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV----TLWYRAPEVL 183
Query: 246 SRNFGEVSHKSDVYSFGMMIMEL 268
++ + D++S G + E+
Sbjct: 184 LQS--TYATPVDMWSVGCIFAEM 204
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 52/219 (23%)
Query: 91 LGQGGFGGVYKG-----------------------RLLDDFVNEVASISRTSHVNVVTLL 127
+G+G FG V++G + + F+ E ++ + H ++V L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV----YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYL 183
G E N +I E G L F+ Y+ D + Y ++ L YL
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILY---------AYQLSTALAYL 124
Query: 184 HHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
S + +H DI N+L+ + C K+ DFGL++ +S + I ++APE
Sbjct: 125 E---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS--KGKLPIKWMAPE 179
Query: 244 VFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNN 274
S NF + SDV+ FG+ + E++ G KNN
Sbjct: 180 --SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 216
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 116/272 (42%), Gaps = 44/272 (16%)
Query: 89 DKLGQGGFGGVYKGR---------------------LLDDFVNEVASISRTSHVNVVTLL 127
+K+G+G +G VYK R + + E++ + +H N+V LL
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
N L++E + + L+ F+ + T P ++ + + +GL + H
Sbjct: 68 DVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIK-----SYLFQLLQGLAFCH-- 119
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++LH D+KP N+L++ + K++DFGLA+ V + + Y APE+
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAPEIL- 174
Query: 247 RNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGV 306
S D++S G + E+V + L G DS + F I+R + E PGV
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMV-TRRALFPG-DSEIDQLFR--IFRTLGTPDEVVWPGV 230
Query: 307 VTRKENEIAKKMIIVGLWCIQARPSDRPPMNE 338
+ + + + W Q PP++E
Sbjct: 231 TSMPDYKPS-----FPKWARQDFSKVVPPLDE 257
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 43/217 (19%)
Query: 91 LGQGGFGGVYKGR-LLDD-------------------FVNEVASISRTSHVNVVTLLGFC 130
LG+GGFG V++ + +DD + EV ++++ H +V
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 131 LEGN-------NRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM--YEIVIGIAKGLE 181
LE N + +Y ++ K + C E+ I + IA+ +E
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 182 YLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL---------LG 232
+LH S ++H D+KP NI D K+ DFGL E + L G
Sbjct: 133 FLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 233 ARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G Y++PE N SHK D++S G+++ EL+
Sbjct: 190 QVGTKLYMSPEQIHGN--SYSHKVDIFSLGLILFELL 224
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 106/277 (38%), Gaps = 62/277 (22%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVY---NGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
+ + LI E+ P G++ + + D + Y + +A L Y H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY---------ITELANALSYCH- 129
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVF 245
S +++H DIKP N+LL + KI+DFG + + G + Y+ PE+
Sbjct: 130 --SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLC-----GTLDYLPPEMI 182
Query: 246 SRNFGEVSHKSDVYSFGMMIME-LVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
+ K D++S G++ E LVG E + YR + + EF P
Sbjct: 183 EGRMHD--EKVDLWSLGVLCYEFLVGM---------PPFEAHTYQETYRRISRV-EFTFP 230
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
VT ++ ++ ++ S R + EV+E
Sbjct: 231 DFVTEGARDLISRL-------LKHNASQRLTLAEVLE 260
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 52/219 (23%)
Query: 91 LGQGGFGGVYKG-----------------------RLLDDFVNEVASISRTSHVNVVTLL 127
+G+G FG V++G + + F+ E ++ + H ++V L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV----YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYL 183
G E N +I E G L F+ Y+ D + Y ++ L YL
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILY---------AYQLSTALAYL 129
Query: 184 HHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
S + +H DI N+L+ + C K+ DFGL++ +S + I ++APE
Sbjct: 130 E---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS--KGKLPIKWMAPE 184
Query: 244 VFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNN 274
S NF + SDV+ FG+ + E++ G KNN
Sbjct: 185 --SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 221
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 91/206 (44%), Gaps = 50/206 (24%)
Query: 87 FKDKLGQGGFGGVY--KGRLL-----------------DDFVNEVASISRTSHVNVVTLL 127
F + LG G F V+ K RL NE+A + + H N+VTL
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 128 GFCLEGNNRALIYEFMPNGS-----LEKFVYNGDTSKPCQYLRWEKMYEIVI-GIAKGLE 181
+ L+ + + G LE+ VY EK +VI + ++
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVYT------------EKDASLVIQQVLSAVK 120
Query: 182 YLHHGCSTKILHFDIKPHNILL---DEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIG 238
YLH I+H D+KP N+L +E+ I+DFGL+K+ + GI+S+ A G G
Sbjct: 121 YLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMST---ACGTPG 172
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMM 264
Y+APEV ++ S D +S G++
Sbjct: 173 YVAPEVLAQK--PYSKAVDCWSIGVI 196
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 138 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIK 197
++ E+MP G L + N D + +W + Y + +A L+ +H S +H D+K
Sbjct: 146 MVMEYMPGGDLVNLMSNYDVPE-----KWARFYTAEVVLA--LDAIH---SMGFIHRDVK 195
Query: 198 PHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGE--VSHK 255
P N+LLD+ K++DFG + KEG+V A G YI+PEV G+ +
Sbjct: 196 PDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGYYGRE 253
Query: 256 SDVYSFGMMIMELV 269
D +S G+ + E++
Sbjct: 254 CDWWSVGVFLYEML 267
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 138 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIK 197
++ E+MP G L + N D + +W + Y + +A L+ +H S +H D+K
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPE-----KWARFYTAEVVLA--LDAIH---SMGFIHRDVK 200
Query: 198 PHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGE--VSHK 255
P N+LLD+ K++DFG + KEG+V A G YI+PEV G+ +
Sbjct: 201 PDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGYYGRE 258
Query: 256 SDVYSFGMMIMELV 269
D +S G+ + E++
Sbjct: 259 CDWWSVGVFLYEML 272
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 52/219 (23%)
Query: 91 LGQGGFGGVYKG-----------------------RLLDDFVNEVASISRTSHVNVVTLL 127
+G+G FG V++G + + F+ E ++ + H ++V L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV----YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYL 183
G E N +I E G L F+ Y+ D + Y ++ L YL
Sbjct: 83 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILY---------AYQLSTALAYL 132
Query: 184 HHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
S + +H DI N+L+ + C K+ DFGL++ +S + I ++APE
Sbjct: 133 E---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS--KGKLPIKWMAPE 187
Query: 244 VFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNN 274
S NF + SDV+ FG+ + E++ G KNN
Sbjct: 188 --SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 224
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 52/219 (23%)
Query: 91 LGQGGFGGVYKG-----------------------RLLDDFVNEVASISRTSHVNVVTLL 127
+G+G FG V++G + + F+ E ++ + H ++V L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV----YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYL 183
G E N +I E G L F+ Y+ D + Y ++ L YL
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILY---------AYQLSTALAYL 155
Query: 184 HHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
S + +H DI N+L+ + C K+ DFGL++ +S + I ++APE
Sbjct: 156 E---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS--KGKLPIKWMAPE 210
Query: 244 VFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNN 274
S NF + SDV+ FG+ + E++ G KNN
Sbjct: 211 --SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 247
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 100 ELRLLKHMKHENVIGLLDV------------FTPATSLEEFNDVYLVTHLMGADLNNIVK 147
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 148 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 204
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 205 DDE------MTGYVATRWYRAPEIM-LNWMHYNMTVDIWSVGCIMAELL 246
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 52/219 (23%)
Query: 91 LGQGGFGGVYKG-----------------------RLLDDFVNEVASISRTSHVNVVTLL 127
+G+G FG V++G + + F+ E ++ + H ++V L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV----YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYL 183
G E N +I E G L F+ Y+ D + Y ++ L YL
Sbjct: 81 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILY---------AYQLSTALAYL 130
Query: 184 HHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
S + +H DI N+L+ + C K+ DFGL++ +S + I ++APE
Sbjct: 131 E---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS--KGKLPIKWMAPE 185
Query: 244 VFSRNFGEVSHKSDVYSFGMMIMELV--------GCKNN 274
S NF + SDV+ FG+ + E++ G KNN
Sbjct: 186 --SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 222
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 138 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIK 197
++ E+MP G L + N D + +W + Y + +A L+ +H S +H D+K
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPE-----KWARFYTAEVVLA--LDAIH---SMGFIHRDVK 200
Query: 198 PHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGE--VSHK 255
P N+LLD+ K++DFG + KEG+V A G YI+PEV G+ +
Sbjct: 201 PDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGYYGRE 258
Query: 256 SDVYSFGMMIMELV 269
D +S G+ + E++
Sbjct: 259 CDWWSVGVFLYEML 272
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 14/162 (8%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRAL--IYEFMPNGSLEKFVYNGDTSKPCQYLRWE 167
E+ + H +++ G C + ++L + E++P GSL ++ P +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-------PRHSIGLA 117
Query: 168 KMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV 227
++ I +G+ YLH + +H ++ N+LLD D KI DFGLAK
Sbjct: 118 QLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + APE + + SDV+SFG+ + EL+
Sbjct: 175 RVREDGDSPVFWYAPECLKEY--KFYYASDVWSFGVTLYELL 214
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI D+GLA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K CQ+L
Sbjct: 73 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSN 127
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 128 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
L Y APE+ + G + D++S G ++ E++
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLS 227
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 76 NFSDVKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNN 135
+F V K N L L+D++ E+ ++ H N+V LL NN
Sbjct: 22 DFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENN 81
Query: 136 RALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFD 195
++ EF G+++ + + +P L ++ + L YLH KI+H D
Sbjct: 82 LWILIEFCAGGAVDAVML--ELERP---LTESQIQVVCKQTLDALNYLH---DNKIIHRD 133
Query: 196 IKPHNILLDEDFCPKISDFGL-AKLCTTKEGIVSSLLGARGIIGYIAPEVF---SRNFGE 251
+K NIL D K++DFG+ AK T S +G ++APEV +
Sbjct: 134 LKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTP---YWMAPEVVMCETSKDRP 190
Query: 252 VSHKSDVYSFGMMIMELV 269
+K+DV+S G+ ++E+
Sbjct: 191 YDYKADVWSLGITLIEMA 208
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 18/170 (10%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H N++TL +G ++ E M G L + ++ + ++ I K
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ------KFFSEREASAVLFTITK 127
Query: 179 GLEYLHHGCSTKILHFDIKPHNIL-LDEDFCP---KISDFGLAKLCTTKEGIVSSLLGAR 234
+EYLH + ++H D+KP NIL +DE P +I DFG AK + G+ L+
Sbjct: 128 TVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL---LMTPC 181
Query: 235 GIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
++APEV R + + D++S G+++ ++ +G D + E
Sbjct: 182 YTANFVAPEVLERQGYDAA--CDIWSLGVLLYTMLTGYTPFANGPDDTPE 229
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N + D++S G ++ EL+
Sbjct: 176 DDE------MTGYVATRWYRAPEIM-LNAMHYNQTVDIWSVGCIMAELL 217
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 36/251 (14%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLE--KFVYNGDTSKPCQYLRW 166
+ E+ + + H N+V LL C + L++EF+ + L+ + NG L +
Sbjct: 72 MREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG--------LDY 123
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + + I G+ + H S I+H DIKP NIL+ + K+ DFG A+ +
Sbjct: 124 QVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSS 282
+ R Y APE+ G+V + DV++ G ++ E+ + DS +D
Sbjct: 181 YDDEVATR---WYRAPELL---VGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQL 234
Query: 283 SEVY--FPHWIYRHVEQDRE------FKLPGV-----VTRKENEIAKKMIIVGLWCIQAR 329
+ + I RH E + +LP + + R+ ++++ +I + C+
Sbjct: 235 YHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHID 294
Query: 330 PSDRPPMNEVI 340
P RP E++
Sbjct: 295 PDKRPFCAELL 305
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 44/215 (20%)
Query: 91 LGQGGFGGVYKG-----------------------RLLDDFVNEVASISRTSHVNVVTLL 127
+G+G FG V++G + + F+ E ++ + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
G E N +I E G L F+ S L + ++ L YL
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRKFS-----LDLASLILYAYQLSTALAYLE--- 508
Query: 188 STKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSR 247
S + +H DI N+L+ + C K+ DFGL++ +S + I ++APE S
Sbjct: 509 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS--KGKLPIKWMAPE--SI 564
Query: 248 NFGEVSHKSDVYSFGMMIMELV--------GCKNN 274
NF + SDV+ FG+ + E++ G KNN
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 599
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 27/193 (13%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I G +YLH +++H D+K N+ L+ED KI DFGLA +L G
Sbjct: 126 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP- 181
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV 295
YIAPEV S+ S + DV+S G ++ L+ K ++ + Y +
Sbjct: 182 --NYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKET--------YLRI 229
Query: 296 EQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI--EMLQGSTEALQIP 353
+++ E+ +P + + +KM +Q P+ RP +NE++ E ++P
Sbjct: 230 KKN-EYSIPKHINPVAASLIQKM-------LQTDPTARPTINELLNDEFFTSGYIPARLP 281
Query: 354 PTPFLSSPPRAPI 366
T L+ PPR I
Sbjct: 282 IT-CLTIPPRFSI 293
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 106/277 (38%), Gaps = 62/277 (22%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + EV S H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVY---NGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
+ + LI E+ P G++ + + D + Y + +A L Y H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY---------ITELANALSYCH- 129
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVF 245
S +++H DIKP N+LL + KI+DFG + + G + Y+ PE+
Sbjct: 130 --SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC-----GTLDYLPPEMI 182
Query: 246 SRNFGEVSHKSDVYSFGMMIME-LVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
+ K D++S G++ E LVG E + YR + + EF P
Sbjct: 183 EGRMHD--EKVDLWSLGVLCYEFLVGM---------PPFEAHTYQETYRRISRV-EFTFP 230
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
VT ++ ++ ++ S R + EV+E
Sbjct: 231 DFVTEGARDLISRL-------LKHNASQRLTLAEVLE 260
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 95/223 (42%), Gaps = 44/223 (19%)
Query: 89 DKLGQGGFGGVYKG--------------RLLDD-------FVNEVASISRTSHVNVVTLL 127
+K+G+G +G V+K RL DD + E+ + H N+V L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV--YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
L++EF + L+K+ NGD L E + + + KGL + H
Sbjct: 68 DVLHSDKKLTLVFEFC-DQDLKKYFDSCNGD-------LDPEIVKSFLFQLLKGLGFCH- 118
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI-IGYIAPEV 244
S +LH D+KP N+L++ + K++DFGLA+ GI A + + Y P+V
Sbjct: 119 --SRNVLHRDLKPQNLLINRNGELKLADFGLARAF----GIPVRCYSAEVVTLWYRPPDV 172
Query: 245 FSRNFGE--VSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
FG S D++S G + EL L G D ++
Sbjct: 173 L---FGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQL 212
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 44/215 (20%)
Query: 91 LGQGGFGGVYKG-----------------------RLLDDFVNEVASISRTSHVNVVTLL 127
+G+G FG V++G + + F+ E ++ + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
G E N +I E G L F+ S L + ++ L YL
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKFS-----LDLASLILYAYQLSTALAYLE--- 128
Query: 188 STKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSR 247
S + +H DI N+L+ C K+ DFGL++ +S + I ++APE S
Sbjct: 129 SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKAS--KGKLPIKWMAPE--SI 184
Query: 248 NFGEVSHKSDVYSFGMMIMELV--------GCKNN 274
NF + SDV+ FG+ + E++ G KNN
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 16/145 (11%)
Query: 129 FCLEGNNRAL--IYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
FC +++ L + E+MP G L + N D + +W K Y + +A L+ +H
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE-----KWAKFYTAEVVLA--LDAIH-- 191
Query: 187 CSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFS 246
S ++H D+KP N+LLD+ K++DFG + + G+V A G YI+PEV
Sbjct: 192 -SMGLIHRDVKPDNMLLDKHGHLKLADFGTC-MKMDETGMVHCDT-AVGTPDYISPEVLK 248
Query: 247 RNFGE--VSHKSDVYSFGMMIMELV 269
G+ + D +S G+ + E++
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEML 273
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 27/193 (13%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I G +YLH +++H D+K N+ L+ED KI DFGLA +G +L G
Sbjct: 124 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATK-VEYDGERKKVLC--G 177
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV 295
YIAPEV S+ S + DV+S G ++ L+ K ++ + Y +
Sbjct: 178 TPNYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKET--------YLRI 227
Query: 296 EQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI--EMLQGSTEALQIP 353
+++ E+ +P + + +KM +Q P+ RP +NE++ E ++P
Sbjct: 228 KKN-EYSIPKHINPVAASLIQKM-------LQTDPTARPTINELLNDEFFTSGYIPARLP 279
Query: 354 PTPFLSSPPRAPI 366
T L+ PPR I
Sbjct: 280 IT-CLTIPPRFSI 291
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 27/193 (13%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I G +YLH +++H D+K N+ L+ED KI DFGLA +L G
Sbjct: 130 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP- 185
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV 295
YIAPEV S+ S + DV+S G ++ L+ K ++ + Y +
Sbjct: 186 --NYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKET--------YLRI 233
Query: 296 EQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI--EMLQGSTEALQIP 353
+++ E+ +P + + +KM +Q P+ RP +NE++ E ++P
Sbjct: 234 KKN-EYSIPKHINPVAASLIQKM-------LQTDPTARPTINELLNDEFFTSGYIPARLP 285
Query: 354 PTPFLSSPPRAPI 366
T L+ PPR I
Sbjct: 286 IT-CLTIPPRFSI 297
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 23/185 (12%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSL--------EKFVYNG---------DTSKPC 161
SH N+V LLG C LI+E+ G L EKF + + +
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 162 QYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT 221
L +E + +AKG+E+L +H D+ N+L+ KI DFGLA+
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 222 TKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDS 281
+ V AR + ++APE G + KSDV+S+G+++ E+ N G+
Sbjct: 224 SDSNYVVR-GNARLPVKWMAPESLFE--GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280
Query: 282 SSEVY 286
+ Y
Sbjct: 281 DANFY 285
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDT-SKPCQYLRWEK 168
+E +S +H ++ + G + +I +++ G L + P K
Sbjct: 55 DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA-----K 109
Query: 169 MYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVS 228
Y + +A LEYLH S I++ D+KP NILLD++ KI+DFG AK +
Sbjct: 110 FYAAEVCLA--LEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP---DVTY 161
Query: 229 SLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
L G YIAPEV S + D +SFG++I E++
Sbjct: 162 XLCGTP---DYIAPEVVSTK--PYNKSIDWWSFGILIYEMLA 198
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 70 LPLKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRLLDDF-VNEVASISRTSHVNVVTLLG 128
L L R +F +V ++ + Q GF K L+ F E+ + + + +V L G
Sbjct: 80 LRLGRGSFGEVHRMEDK------QTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYG 133
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIA-KGLEYLHHGC 187
EG + E + GSL + V Q E +G A +GLEYLH
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVKE-------QGCLPEDRALYYLGQALEGLEYLH--- 183
Query: 188 STKILHFDIKPHNILLDEDFC-PKISDFGLAKLCTTKEGIVSSLLGARGIIG---YIAPE 243
S +ILH D+K N+LL D + DFG A +C +G+ LL I G ++APE
Sbjct: 184 SRRILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLGKDLLTGDYIPGTETHMAPE 242
Query: 244 -VFSRNFGEVSHKSDVY-SFGMMIMELVGC 271
V R+ K DV+ S MM+ L GC
Sbjct: 243 VVLGRS---CDAKVDVWSSCCMMLHMLNGC 269
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 29/201 (14%)
Query: 91 LGQGGFGGV---YKGRLLDDFVNEVASISRTSHVNV------VTLLGFCLEGNNRALIYE 141
+G G +G V Y RL + S S ++ + LL N L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 142 FMPNGSLEKF--VY------NGDTSK--PCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKI 191
F P S+E F VY D + Q L E + +V + +GL+Y+H S I
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH---SAGI 152
Query: 192 LHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGE 251
+H D+KP N+ ++ED +I DFGLA+ + + G Y APE+ N+
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLARQADEE------MTGYVATRWYRAPEIM-LNWMH 205
Query: 252 VSHKSDVYSFGMMIMELVGCK 272
+ D++S G ++ EL+ K
Sbjct: 206 YNQTVDIWSVGCIMAELLQGK 226
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 26/181 (14%)
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
E + +I + K L +L + KI+H DIKP NILLD K+ DFG++ +
Sbjct: 125 EILGKITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISG------QL 176
Query: 227 VSSLLGAR--GIIGYIAPEVFSRNFGEVSH--KSDVYSFGMMIMELVGCKNNLDSGVDSS 282
V S+ R G Y+APE + + +SDV+S G+ + EL ++
Sbjct: 177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYEL------------AT 224
Query: 283 SEVYFPHW--IYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+P W ++ + Q + P + +E E + I C+ S RP E++
Sbjct: 225 GRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
Query: 341 E 341
+
Sbjct: 285 K 285
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 67 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 114
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
C L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 115 CAKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 171
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ G Y APE+ N+ + D++S G ++ EL+
Sbjct: 172 D------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 213
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 32/234 (13%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFV---YNGDTSKPCQYLR 165
NE++ +++ H N++ L N+ L+ E++ G L ++ + YN +++
Sbjct: 135 NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK 194
Query: 166 WEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNIL-LDEDFCP-KISDFGLAKLCTTK 223
I +G+ ++H ILH D+KP NIL ++ D KI DFGLA+ +
Sbjct: 195 ---------QICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR 242
Query: 224 EGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMI-MELVGCKNNL-DSGVDS 281
E + + G ++APEV + +F VS +D++S G++ M L G L D+ ++
Sbjct: 243 EKLKVNF----GTPEFLAPEVVNYDF--VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET 296
Query: 282 SSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPP 335
+ + W +D EF+ + + I+K +I W I A + + P
Sbjct: 297 LNNILACRWDL----EDEEFQ--DISEEAKEFISKLLIKEKSWRISASEALKHP 344
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 44/215 (20%)
Query: 91 LGQGGFGGVYKG-----------------------RLLDDFVNEVASISRTSHVNVVTLL 127
+G+G FG V++G + + F+ E ++ + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC 187
G E N +I E G L F+ S L + ++ L YL
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRKFS-----LDLASLILYAYQLSTALAYLE--- 508
Query: 188 STKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSR 247
S + +H DI N+L+ C K+ DFGL++ +S + I ++APE S
Sbjct: 509 SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKAS--KGKLPIKWMAPE--SI 564
Query: 248 NFGEVSHKSDVYSFGMMIMELV--------GCKNN 274
NF + SDV+ FG+ + E++ G KNN
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 599
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 27/190 (14%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I G +YLH +++H D+K N+ L+ED KI DFGLA +G +L G
Sbjct: 150 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLC--G 203
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV 295
YIAPEV S+ S + DV+S G ++ L+ K ++ + Y +
Sbjct: 204 TPNYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKET--------YLRI 253
Query: 296 EQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI--EMLQGSTEALQIP 353
+++ E+ +P + + +KM +Q P+ RP +NE++ E ++P
Sbjct: 254 KKN-EYSIPKHINPVAASLIQKM-------LQTDPTARPTINELLNDEFFTSGYIPARLP 305
Query: 354 PTPFLSSPPR 363
T L+ PPR
Sbjct: 306 IT-CLTIPPR 314
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 27/193 (13%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I G +YLH +++H D+K N+ L+ED KI DFGLA +G +L G
Sbjct: 148 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLC--G 201
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV 295
YIAPEV S+ S + DV+S G ++ L+ K ++ + Y +
Sbjct: 202 TPNYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKET--------YLRI 251
Query: 296 EQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI--EMLQGSTEALQIP 353
+++ E+ +P + + +KM +Q P+ RP +NE++ E ++P
Sbjct: 252 KKN-EYSIPKHINPVAASLIQKM-------LQTDPTARPTINELLNDEFFTSGYIPARLP 303
Query: 354 PTPFLSSPPRAPI 366
T L+ PPR I
Sbjct: 304 IT-CLTIPPRFSI 315
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 47/225 (20%)
Query: 72 LKRYNFSDVKKLTNSFKDKLGQGGFGGVYKGRLL-------------------DDFVNEV 112
+ +++ D K+L +F KL + G ++KGR DF E
Sbjct: 1 MNKHSGIDFKQL--NFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEEC 58
Query: 113 ASISRTSHVNVVTLLGFCLE--GNNRALIYEFMPNGSLEKFVYNG-----DTSKPCQYLR 165
+ SH NV+ +LG C + LI +MP GSL ++ G D S+ ++
Sbjct: 59 PRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKF-- 116
Query: 166 WEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEG 225
+ +A+G+ +L H I + ++++DED +IS + K
Sbjct: 117 -------ALDMARGMAFL-HTLEPLIPRHALNSRSVMIDEDMTARIS------MADVKFS 162
Query: 226 IVSSLLGARGIIGYIAPEVFSRNFGEVSHKS-DVYSFGMMIMELV 269
S G ++APE + + + +S D++SF +++ ELV
Sbjct: 163 FQSP--GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 205
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H N++TL +G + L+ E M G L + ++ + ++ I K
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ------KFFSEREASFVLHTIGK 132
Query: 179 GLEYLHHGCSTKILHFDIKPHNIL-LDED---FCPKISDFGLAKLCTTKEGIVSSLLGAR 234
+EYLH S ++H D+KP NIL +DE C +I DFG AK + G+ L+
Sbjct: 133 TVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL---LMTPC 186
Query: 235 GIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
++APEV R D++S G+++ ++ +G + E
Sbjct: 187 YTANFVAPEVLKRQ--GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE 234
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 80 VKKLTNSFKDKLGQGGFGG-VYKG----------RLLDD---FVNEVASISRTS--HVNV 123
V K++ KD LG G G VY+G R+L + F + + R S H NV
Sbjct: 21 VGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNV 80
Query: 124 VTLLGFCLEGNNR-ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 182
+ FC E + + I + +L+++V D + +L E + ++ GL +
Sbjct: 81 IRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFA----HLGLEPI-TLLQQTTSGLAH 133
Query: 183 LHHGCSTKILHFDIKPHNILLDE-----DFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
LH S I+H D+KPHNIL+ ISDFGL K S G G
Sbjct: 134 LH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 238 GYIAPEVFSRNFGE-VSHKSDVYSFG 262
G+IAPE+ S + E ++ D++S G
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAG 216
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + L + D K Q+L
Sbjct: 89 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSN 143
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 144 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 200
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 245
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI D GLA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI FGLA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 40/221 (18%)
Query: 91 LGQGGFGGVYKGRLLDD-------------FVNEVASISR-TSHVNVVTLLGFCLEGNNR 136
+G G FG V++ +L++ F N I R H NVV L F ++
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDK 107
Query: 137 A------LIYEFMPNGSLEKFVYNGDTSKPCQYLRWE-KMYEIVIGIAKGLEYLHHGCST 189
L+ E++P + + L + MY+++ + L Y+H S
Sbjct: 108 KDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLL----RSLAYIH---SI 160
Query: 190 KILHFDIKPHNILLD-EDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRN 248
I H DIKP N+LLD K+ DFG AK+ E VS + Y APE+
Sbjct: 161 GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY----YRAPELI--- 213
Query: 249 FGEVSHKS--DVYSFGMMIMELVGCKNNL--DSGVDSSSEV 285
FG ++ + D++S G ++ EL+ + +SG+D E+
Sbjct: 214 FGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEI 254
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI D GLA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DF LA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 24/165 (14%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I G +YLH +++H D+K N+ L+ED KI DFGLA +L G
Sbjct: 126 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP- 181
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHV 295
YIAPEV S+ S + DV+S G ++ L+ K ++ + Y +
Sbjct: 182 --NYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKET--------YLRI 229
Query: 296 EQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
+++ E+ +P + + +KM +Q P+ RP +NE++
Sbjct: 230 KKN-EYSIPKHINPVAASLIQKM-------LQTDPTARPTINELL 266
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 18/169 (10%)
Query: 120 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
H N++TL +G + L+ E M G L + ++ + ++ I K
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ------KFFSEREASFVLHTIGKT 133
Query: 180 LEYLHHGCSTKILHFDIKPHNIL-LDEDF---CPKISDFGLAKLCTTKEGIVSSLLGARG 235
+EYLH S ++H D+KP NIL +DE C +I DFG AK + G+ L+
Sbjct: 134 VEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL---LMTPCY 187
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
++APEV R D++S G+++ ++ +G + E
Sbjct: 188 TANFVAPEVLKRQ--GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE 234
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 32/173 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
Q L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 119 XQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 273
+ G Y APE+ N+ + D++S G ++ EL+ +
Sbjct: 176 D------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 25/172 (14%)
Query: 102 GRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKP 160
G LLD EVA + + H N++ L F + N L+ E G L ++ + S+
Sbjct: 66 GALLD----EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV 121
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLD---EDFCPKISDFGLA 217
+ I+ + G YLH I+H D+KP N+LL+ D KI DFGL+
Sbjct: 122 DAAV-------IMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
Query: 218 KLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ L G YIAPEV + + E K DV+S G+++ L+
Sbjct: 172 AHFEVGGKMKERL----GTAYYIAPEVLRKKYDE---KCDVWSCGVILYILL 216
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
K + + + E+ + + +V G ++ E M GSL++ + K
Sbjct: 54 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL------KE 107
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
+ + E + ++ I + +GL YL +I+H D+KP NIL++ K+ DFG++
Sbjct: 108 AKRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 165
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + +S +G R Y+APE V +SD++S G+ ++EL
Sbjct: 166 I--DSMANSFVGTR---SYMAPERLQGTHYSV--QSDIWSMGLSLVELA 207
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
+A+G+E+L S K +H D+ NILL E+ KI DFGLA+ V R
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK-GDTRL 263
Query: 236 IIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRH 294
+ ++APE +F + + S KSDV+S+G+++ E+ + GV +
Sbjct: 264 PLKWMAPESIFDKIY---STKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDF--------- 311
Query: 295 VEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEML 343
+ RE G+ R ++ + L C P +RP E++E L
Sbjct: 312 CSRLRE----GMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 123 VVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 182
VT G + + E M + SL+KF Y K Q + + + +I + I K LE+
Sbjct: 112 TVTFYGALFREGDVWICMELM-DTSLDKF-YKQVIDK-GQTIPEDILGKIAVSIVKALEH 168
Query: 183 LHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAP 242
LH S ++H D+KP N+L++ K+ DFG++ V+ + A G Y+AP
Sbjct: 169 LHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDS---VAKTIDA-GCKPYMAP 222
Query: 243 EVFSRNFGE--VSHKSDVYSFGMMIMELVGCKNNLDS 277
E + + S KSD++S G+ ++EL + DS
Sbjct: 223 ERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 259
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 25/168 (14%)
Query: 102 GRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKP 160
G LLD EVA + + H N++ L F + N L+ E G L ++ + S+
Sbjct: 49 GALLD----EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV 104
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLD---EDFCPKISDFGLA 217
+ I+ + G YLH I+H D+KP N+LL+ D KI DFGL+
Sbjct: 105 DAAV-------IMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
Query: 218 KLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMI 265
+ L G YIAPEV + + E K DV+S G+++
Sbjct: 155 AHFEVGGKMKERL----GTAYYIAPEVLRKKYDE---KCDVWSCGVIL 195
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
CQ L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI D GLA+
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 DDE------MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEF---MP--NGSLEKFVYNGDTSKPCQYL 164
E+ + H NV+ LL ++ Y+F MP L+K + + + QYL
Sbjct: 90 RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYL 149
Query: 165 RWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKE 224
V + KGL+Y+H S ++H D+KP N+ ++ED KI DFGLA+
Sbjct: 150 --------VYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD--- 195
Query: 225 GIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 273
+ + G Y APEV ++ + D++S G ++ E++ K
Sbjct: 196 ---AEMTGYVVTRWYRAPEVI-LSWMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV--------YNGDTSKPC 161
E+ + H NV+ LL F P+ +L+ F D K
Sbjct: 73 RELRLLKHMRHENVIGLLDV------------FTPDETLDDFTDFYLVMPFMGTDLGKLM 120
Query: 162 QY--LRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKL 219
++ L +++ +V + KGL Y+H + I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 121 KHEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177
Query: 220 CTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 273
S + G Y APEV N+ + D++S G ++ E++ K
Sbjct: 178 AD------SEMXGXVVTRWYRAPEVIL-NWMRYTQTVDIWSVGCIMAEMITGKT 224
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 66/293 (22%)
Query: 87 FKDKLGQGGFGGVYKG------------------RLLD--------DFVNEVASISRTSH 120
F + LGQG F ++KG ++LD F + +S+ SH
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 121 VNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGL 180
++V G C+ G+ L+ EF+ GSL+ ++ +K C + W+ E+ +A +
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYL---KKNKNCINILWK--LEVAKQLAAAM 126
Query: 181 EYLHHGCSTKILHFDIKPHNILL--DEDFCP------KISDFGLAKLCTTKEGIVSSLLG 232
+L ++H ++ NILL +ED K+SD G++ K+ +L
Sbjct: 127 HFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD-----ILQ 178
Query: 233 ARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIY 292
R I ++ PE N ++ +D +SFG + E+ + S +DS ++ F
Sbjct: 179 ER--IPWVPPECIE-NPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQF----- 230
Query: 293 RHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQG 345
+DR +LP K E+A +I C+ P RP +I L
Sbjct: 231 ---YEDRH-QLPA---PKAAELAN--LINN--CMDYEPDHRPSFRAIIRDLNS 272
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 44/209 (21%)
Query: 90 KLGQGGFGGVYKGRLLDD----------------------FVNEVASISRTS---HVNVV 124
++G+G +G V+K R L + + EVA + H NVV
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 125 TLLGFC-LEGNNR----ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
L C + +R L++E + + Y +P + E + +++ + +G
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPEPG--VPTETIKDMMFQLLRG 132
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
L++LH S +++H D+KP NIL+ K++DFGLA++ + + + S ++ + Y
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV----TLWY 185
Query: 240 IAPEVFSRNFGEVSHKSDVYSFGMMIMEL 268
APEV ++ + D++S G + E+
Sbjct: 186 RAPEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 44/209 (21%)
Query: 90 KLGQGGFGGVYKGRLLDD----------------------FVNEVASISRTS---HVNVV 124
++G+G +G V+K R L + + EVA + H NVV
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 125 TLLGFC-LEGNNR----ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
L C + +R L++E + + Y +P + E + +++ + +G
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPEPG--VPTETIKDMMFQLLRG 132
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
L++LH S +++H D+KP NIL+ K++DFGLA++ + + + S ++ + Y
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV----TLWY 185
Query: 240 IAPEVFSRNFGEVSHKSDVYSFGMMIMEL 268
APEV ++ + D++S G + E+
Sbjct: 186 RAPEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 69 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 123
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 124 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDH 180
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
Q L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFGLA+
Sbjct: 119 XQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ G Y APE+ N+ + D++S G ++ EL+
Sbjct: 176 D------DEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF--VY--------NGDTSKP 160
E+ + H NV+ LL F P SLE+F VY + +
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
Q L + + ++ I +GL+Y+H S I+H D+KP N+ ++ED KI DFG LC
Sbjct: 119 SQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFG---LC 172
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ ++ + R Y APE+ N+ + D++S G ++ EL+
Sbjct: 173 RHTDDEMTGYVATR---WYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 25/171 (14%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDT--- 157
+G ++ EV + H N++TL + LI E + G L F+ ++
Sbjct: 48 RGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE 107
Query: 158 SKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISD 213
+ Q+L+ I G+ YLH S +I HFD+KP NI+L + P K+ D
Sbjct: 108 DEATQFLKQ---------ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLID 155
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
FG+A + G ++APE+ N+ + ++D++S G++
Sbjct: 156 FGIAHKIEAG----NEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 200
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 138 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIK 197
++ E++ +L V+ P ++ E++ + L + H I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTP------KRAIEVIADACQALNFSHQ---NGIIHRDVK 143
Query: 198 PHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSD 257
P NI++ K+ DFG+A+ V+ G Y++PE + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 258 VYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQD 298
VYS G ++ E++ + DS V Y+HV +D
Sbjct: 202 VYSLGCVLYEVLTGEPPFTG--DSPDSV-----AYQHVRED 235
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 25/171 (14%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDT--- 157
+G ++ EV + H N++TL + LI E + G L F+ ++
Sbjct: 55 RGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE 114
Query: 158 SKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISD 213
+ Q+L+ I G+ YLH S +I HFD+KP NI+L + P K+ D
Sbjct: 115 DEATQFLKQ---------ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLID 162
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
FG+A + G ++APE+ N+ + ++D++S G++
Sbjct: 163 FGIAHKIEAG----NEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEF---MP--NGSLEKFVYNGDTSKPCQYL 164
E+ + H NV+ LL ++ Y+F MP L+K + + + QYL
Sbjct: 72 RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYL 131
Query: 165 RWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKE 224
V + KGL+Y+H S ++H D+KP N+ ++ED KI DFGLA+
Sbjct: 132 --------VYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD--- 177
Query: 225 GIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 273
+ + G Y APEV ++ + D++S G ++ E++ K
Sbjct: 178 ---AEMTGYVVTRWYRAPEVI-LSWMHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 44/209 (21%)
Query: 90 KLGQGGFGGVYKGRLLDD----------------------FVNEVASISRTS---HVNVV 124
++G+G +G V+K R L + + EVA + H NVV
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 125 TLLGFC-LEGNNR----ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
L C + +R L++E + + Y +P + E + +++ + +G
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPEPG--VPTETIKDMMFQLLRG 132
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
L++LH S +++H D+KP NIL+ K++DFGLA++ + + + S ++ + Y
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV----TLWY 185
Query: 240 IAPEVFSRNFGEVSHKSDVYSFGMMIMEL 268
APEV ++ + D++S G + E+
Sbjct: 186 RAPEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 7/164 (4%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEK 168
+ E+ + R H NV+ + A+ ++ +E +Y S Q L +
Sbjct: 89 LREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKS---QQLSNDH 145
Query: 169 MYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVS 228
+ + I +GL+Y+H S +LH D+KP N+L++ KI DFGLA++ +
Sbjct: 146 ICYFLYQILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTG 202
Query: 229 SLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 203 FLTEXVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 245
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 55/243 (22%)
Query: 52 KITKSDKDLEAFIRNYGPLPLKR-----YNFSDVKKLTNSFKDKLGQGGFGGVYK----- 101
KI DK E + Y P P++ Y++ D+ ++LG G FG V++
Sbjct: 22 KINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDIL-------EELGSGAFGVVHRCVEKA 74
Query: 102 -GRL-----------LDDFV--NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGS 147
GR+ LD + NE++ +++ H ++ L + LI EF+ G
Sbjct: 75 TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGE 134
Query: 148 LEKFV----YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILL 203
L + Y ++ Y+R +GL+++H I+H DIKP NI+
Sbjct: 135 LFDRIAAEDYKMSEAEVINYMR---------QACEGLKHMHEHS---IVHLDIKPENIMC 182
Query: 204 DEDFCP--KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSF 261
+ KI DFGLA E + + A + APE+ R V +D+++
Sbjct: 183 ETKKASSVKIIDFGLATKLNPDEIVKVTTATAE----FAAPEIVDRE--PVGFYTDMWAI 236
Query: 262 GMM 264
G++
Sbjct: 237 GVL 239
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 73 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 128 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 25/171 (14%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDT--- 157
+G ++ EV + H N++TL + LI E + G L F+ ++
Sbjct: 69 RGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE 128
Query: 158 SKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISD 213
+ Q+L+ I G+ YLH S +I HFD+KP NI+L + P K+ D
Sbjct: 129 DEATQFLKQ---------ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLID 176
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
FG+A + G ++APE+ N+ + ++D++S G++
Sbjct: 177 FGIAHKIEAG----NEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVI 221
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 73 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 128 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 185 TGFLXEXVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 74 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 128
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 129 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 186 TGFLXEXVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 230
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 73 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 128 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 69 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 123
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 124 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 69 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 123
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 124 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 44/223 (19%)
Query: 89 DKLGQGGFGGVYKG--------------RLLDD-------FVNEVASISRTSHVNVVTLL 127
+K+G+G +G V+K RL DD + E+ + H N+V L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 128 GFCLEGNNRALIYEFMPNGSLEKFV--YNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
L++EF + L+K+ NGD L E + + + KGL + H
Sbjct: 68 DVLHSDKKLTLVFEFC-DQDLKKYFDSCNGD-------LDPEIVKSFLFQLLKGLGFCH- 118
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI-IGYIAPEV 244
S +LH D+KP N+L++ + K+++FGLA+ GI A + + Y P+V
Sbjct: 119 --SRNVLHRDLKPQNLLINRNGELKLANFGLARAF----GIPVRCYSAEVVTLWYRPPDV 172
Query: 245 FSRNFGE--VSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
FG S D++S G + EL L G D ++
Sbjct: 173 L---FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 212
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 138 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIK 197
++ E++ +L V+ P ++ E++ + L + H I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTP------KRAIEVIADACQALNFSHQ---NGIIHRDVK 143
Query: 198 PHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSD 257
P NI++ K+ DFG+A+ V+ G Y++PE + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 258 VYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQD 298
VYS G ++ E++ + DS V Y+HV +D
Sbjct: 202 VYSLGCVLYEVLTGEPPFTG--DSPVSV-----AYQHVRED 235
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I GLE LH +I++ D+KP NILLD+ +ISD GLA EG ++ G G
Sbjct: 295 ICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEG--QTIKGRVG 347
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+GY+APEV + D ++ G ++ E++
Sbjct: 348 TVGYMAPEVVKNE--RYTFSPDWWALGCLLYEMIA 380
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 138 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIK 197
++ E++ +L V+ P ++ E++ + L + H I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTP------KRAIEVIADACQALNFSHQ---NGIIHRDVK 143
Query: 198 PHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSD 257
P NI++ K+ DFG+A+ V+ G Y++PE + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 258 VYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQD 298
VYS G ++ E++ + DS V Y+HV +D
Sbjct: 202 VYSLGCVLYEVLTGEPPFTG--DSPVSV-----AYQHVRED 235
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 18/161 (11%)
Query: 138 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIK 197
++ E++ +L V+ P ++ E++ + L + H I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTP------KRAIEVIADACQALNFSHQ---NGIIHRDVK 143
Query: 198 PHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSD 257
P NIL+ K+ DFG+A+ V G Y++PE + V +SD
Sbjct: 144 PANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 258 VYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQD 298
VYS G ++ E++ + DS V Y+HV +D
Sbjct: 202 VYSLGCVLYEVLTGEPPFTG--DSPVSV-----AYQHVRED 235
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I GLE LH +I++ D+KP NILLD+ +ISD GLA EG ++ G G
Sbjct: 295 ICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEG--QTIKGRVG 347
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVG 270
+GY+APEV + D ++ G ++ E++
Sbjct: 348 TVGYMAPEVVKNE--RYTFSPDWWALGCLLYEMIA 380
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 35/153 (22%)
Query: 90 KLGQGGFGGVYKG------------RLLDDFVN---------EVASISRTS-HVNVVTLL 127
KLG+G +G V+K ++ D F N E+ ++ S H N+V LL
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 128 GFCLEGNNRA--LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
N+R L++++M V + +P K Y +V + K ++YLH
Sbjct: 76 NVLRADNDRDVYLVFDYMETDL--HAVIRANILEPVH-----KQY-VVYQLIKVIKYLHS 127
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAK 218
G +LH D+KP NILL+ + K++DFGL++
Sbjct: 128 GG---LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 122/293 (41%), Gaps = 66/293 (22%)
Query: 87 FKDKLGQGGFGGVYKG------------------RLLD--------DFVNEVASISRTSH 120
F + LGQG F ++KG ++LD F + +S+ SH
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 121 VNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGL 180
++V G C G+ L+ EF+ GSL+ ++ +K C + W+ E+ +A +
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYL---KKNKNCINILWK--LEVAKQLAWAM 126
Query: 181 EYLHHGCSTKILHFDIKPHNILL--DEDFCP------KISDFGLAKLCTTKEGIVSSLLG 232
+L ++H ++ NILL +ED K+SD G++ K+ +L
Sbjct: 127 HFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD-----ILQ 178
Query: 233 ARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIY 292
R I ++ PE N ++ +D +SFG + E+ + S +DS ++ F
Sbjct: 179 ER--IPWVPPECIE-NPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQF----- 230
Query: 293 RHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIEMLQG 345
+DR +LP K E+A +I C+ P RP +I L
Sbjct: 231 ---YEDRH-QLPAP---KAAELAN--LINN--CMDYEPDHRPSFRAIIRDLNS 272
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 107/236 (45%), Gaps = 27/236 (11%)
Query: 106 DDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLR 165
+ + E+ + + +V G ++ E M GSL++ + K +
Sbjct: 68 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL------KKAGRIP 121
Query: 166 WEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEG 225
+ + ++ I + KGL YL KI+H D+KP NIL++ K+ DFG++ +
Sbjct: 122 EQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DS 177
Query: 226 IVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
+ +S +G R Y++PE V +SD++S G+ ++E+ + + SG S S
Sbjct: 178 MANSFVGTR---SYMSPERLQGTHYSV--QSDIWSMGLSLVEMAVGRYPIGSG--SGSMA 230
Query: 286 YFPHWIYRHVEQDREFKLP-GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI 340
F + ++ + KLP GV + + + K C+ P++R + +++
Sbjct: 231 IFE--LLDYIVNEPPPKLPSGVFSLEFQDFVNK-------CLIKNPAERADLKQLM 277
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 73 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 128 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 138 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIK 197
++ E++ +L V+ P ++ E++ + L + H I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTP------KRAIEVIADACQALNFSHQ---NGIIHRDVK 143
Query: 198 PHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSD 257
P NI++ K+ DFG+A+ V+ G Y++PE + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 258 VYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQD 298
VYS G ++ E++ + DS V Y+HV +D
Sbjct: 202 VYSLGCVLYEVLTGEPPFTG--DSPVSV-----AYQHVRED 235
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 74 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 128
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 129 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 186 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 75 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 129
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 130 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 186
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 187 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 66 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 120
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 121 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 177
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 178 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 222
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 138 LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIK 197
++ E++ +L V+ P ++ E++ + L + H I+H D+K
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTP------KRAIEVIADACQALNFSHQ---NGIIHRDVK 160
Query: 198 PHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSD 257
P NI++ K+ DFG+A+ V+ G Y++PE + V +SD
Sbjct: 161 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 218
Query: 258 VYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQD 298
VYS G ++ E++ + DS V Y+HV +D
Sbjct: 219 VYSLGCVLYEVLTGEPPFTG--DSPVSV-----AYQHVRED 252
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 73 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 128 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 67 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 121
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 122 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 179 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 77 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 131
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 132 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 188
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 189 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 69 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 123
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 124 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 67 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 121
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 122 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 179 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 223
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 17/155 (10%)
Query: 120 HVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
H +++TL+ + L+++ M G L ++ T K L ++ I+ + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVA--LSEKETRSIMRSLLEA 212
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
+ +LH + I+H D+KP NILLD++ ++SDFG + C + G L G GY
Sbjct: 213 VSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFS--CHLEPG--EKLRELCGTPGY 265
Query: 240 IAPEVFSRNFGEV----SHKSDVYSFGMMIMELVG 270
+APE+ + E + D+++ G+++ L+
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA 300
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 43/202 (21%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
VKKL+ F++ Q Y+ +L VN H N+++LL
Sbjct: 54 VKKLSRPFQN---QTHAKRAYRELVLLKCVN---------HKNIISLLNV---------- 91
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQY----LRWEKMYEIVIGIAKGLEYLHHGCSTK 190
F P +LE+F V + CQ L E+M ++ + G+++LH S
Sbjct: 92 --FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFG 250
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV G
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRY----YRAPEVI-LGMG 201
Query: 251 EVSHKSDVYSFGMMIMELV-GC 271
++ D++S G ++ ELV GC
Sbjct: 202 YAAN-VDIWSVGCIMGELVKGC 222
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 69 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 123
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 124 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 71 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 125
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 126 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 227
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 11/156 (7%)
Query: 124 VTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYL 183
VT G + + E M + SL+KF Y K Q + + + +I + I K LE+L
Sbjct: 69 VTFYGALFREGDVWICMELM-DTSLDKF-YKQVIDK-GQTIPEDILGKIAVSIVKALEHL 125
Query: 184 HHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
H S ++H D+KP N+L++ K+ DFG++ V+ + A G Y+APE
Sbjct: 126 HSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKDIDA-GCKPYMAPE 179
Query: 244 VFSRNFGE--VSHKSDVYSFGMMIMELVGCKNNLDS 277
+ + S KSD++S G+ ++EL + DS
Sbjct: 180 RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
K + + + E+ + + +V G ++ E M GSL++ + K
Sbjct: 106 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL------KK 159
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
+ + + ++ I + KGL YL KI+H D+KP NIL++ K+ DFG++
Sbjct: 160 AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 217
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + +S +G R Y++PE V +SD++S G+ ++E+
Sbjct: 218 I--DSMANSFVGTR---SYMSPERLQGTHYSV--QSDIWSMGLSLVEMA 259
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 109 VNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSK--PCQYLRW 166
+ E+ + R H N++ + RA E M + + + + D K Q+L
Sbjct: 89 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 143
Query: 167 EKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI 226
+ + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 144 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 200
Query: 227 VSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 245
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 31/231 (13%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
E++ + H +++ L + ++ E+ N L ++ D + R+ +
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQ- 115
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
I +EY H KI+H D+KP N+LLDE KI+DFGL+ + T + +S
Sbjct: 116 -----IISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 167
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHW 290
G Y APEV S + DV+S G+++ ++ + D D S V F +
Sbjct: 168 ----GSPNYAAPEVISGKL-YAGPEVDVWSCGVILYVMLCRRLPFD---DESIPVLFKNI 219
Query: 291 IYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
+ + LP ++ + K+M+IV P +R ++E+++
Sbjct: 220 ------SNGVYTLPKFLSPGAAGLIKRMLIVN-------PLNRISIHEIMQ 257
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 31/231 (13%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
E++ + H +++ L + ++ E+ N L ++ D + R+ +
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQ- 120
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
I +EY H KI+H D+KP N+LLDE KI+DFGL+ + T + +S
Sbjct: 121 -----IISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 172
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHW 290
G Y APEV S + DV+S G+++ ++ + D D S V F +
Sbjct: 173 ----GSPNYAAPEVISGKL-YAGPEVDVWSCGVILYVMLCRRLPFD---DESIPVLFKNI 224
Query: 291 IYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
+ + LP ++ + K+M+IV P +R ++E+++
Sbjct: 225 ------SNGVYTLPKFLSPGAAGLIKRMLIVN-------PLNRISIHEIMQ 262
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 31/231 (13%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
E++ + H +++ L + ++ E+ N L ++ D + R+ +
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQ- 121
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
I +EY H KI+H D+KP N+LLDE KI+DFGL+ + T + +S
Sbjct: 122 -----IISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 173
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHW 290
G Y APEV S + DV+S G+++ ++ + D D S V F +
Sbjct: 174 ----GSPNYAAPEVISGKL-YAGPEVDVWSCGVILYVMLCRRLPFD---DESIPVLFKNI 225
Query: 291 IYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
+ + LP ++ + K+M+IV P +R ++E+++
Sbjct: 226 ------SNGVYTLPKFLSPGAAGLIKRMLIVN-------PLNRISIHEIMQ 263
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 44/200 (22%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N++ LL
Sbjct: 54 IKKLSRPFQN---QTHAKRAYRELVLMKVVN---------HKNIIGLLNV---------- 91
Query: 140 YEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEKMYEIVIGIAKGLEYLHHGCSTK 190
F P SLE+F VY + + S+ Q L E+M ++ + G+++LH S
Sbjct: 92 --FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 202
Query: 250 GEVSHKSDVYSFGMMIMELV 269
E D++S G+++ E++
Sbjct: 203 KE---NVDIWSVGVIMGEMI 219
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 31/231 (13%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMY 170
E++ + H +++ L + ++ E+ N L ++ D + R+ +
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQ- 111
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSL 230
I +EY H KI+H D+KP N+LLDE KI+DFGL+ + T + +S
Sbjct: 112 -----IISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 163
Query: 231 LGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHW 290
G Y APEV S + DV+S G+++ ++ + D D S V F +
Sbjct: 164 ----GSPNYAAPEVISGKL-YAGPEVDVWSCGVILYVMLCRRLPFD---DESIPVLFKNI 215
Query: 291 IYRHVEQDREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVIE 341
+ + LP ++ + K+M+IV P +R ++E+++
Sbjct: 216 ------SNGVYTLPKFLSPGAAGLIKRMLIVN-------PLNRISIHEIMQ 253
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 162 QYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT 221
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 121 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVAD 177
Query: 222 TKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 178 PDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 227
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 44/200 (22%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N++ LL
Sbjct: 54 IKKLSRPFQN---QTHAKRAYRELVLMKVVN---------HKNIIGLLNV---------- 91
Query: 140 YEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEKMYEIVIGIAKGLEYLHHGCSTK 190
F P SLE+F VY + + S+ Q L E+M ++ + G+++LH S
Sbjct: 92 --FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 202
Query: 250 GEVSHKSDVYSFGMMIMELV 269
E D++S G+++ E++
Sbjct: 203 KE---NVDIWSVGVIMGEMI 219
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 38/225 (16%)
Query: 68 GPLPLKRYNFSDVKKLTNSFKDKLGQGGFGGVYKG-------------------RLLD-- 106
GP+ K+ + VK D LG G FG V G R LD
Sbjct: 1 GPMAEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVV 60
Query: 107 -DFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFV-YNGDTSKPCQYL 164
E+ ++ H +++ L ++ ++ E++ G L ++ NG L
Sbjct: 61 GKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG-------RL 113
Query: 165 RWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKE 224
++ + I G++Y H ++H D+KP N+LLD KI+DFGL+ + + E
Sbjct: 114 DEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170
Query: 225 GIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ S G Y APEV S + D++S G+++ L+
Sbjct: 171 FLRXSC----GSPNYAAPEVISGRL-YAGPEVDIWSSGVILYALL 210
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 37/200 (18%)
Query: 93 QGGFGG--VYKGRLLDDFVN----EVASISRTS-HVNVVTLLGFCLEGNNRALIYEF-MP 144
QG F G V R+L DF + E+ ++ + H NV+ +C E +R L +
Sbjct: 34 QGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRY--YCSETTDRFLYIALELC 91
Query: 145 NGSLEKFVYNGDTSKPCQYLRWEKMYE---IVIGIAKGLEYLHHGCSTKILHFDIKPHNI 201
N +L+ V + + S + L+ +K Y ++ IA G+ +LH S KI+H D+KP NI
Sbjct: 92 NLNLQDLVESKNVSD--ENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNI 146
Query: 202 LLD-------------EDFCPKISDFGL-AKLCTTKEGIVSSLLGARGIIGYIAPEVF-- 245
L+ E+ ISDFGL KL + + ++L G G+ APE+
Sbjct: 147 LVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEE 206
Query: 246 SRNFG---EVSHKSDVYSFG 262
S N ++ D++S G
Sbjct: 207 SNNLQTKRRLTRSIDIFSMG 226
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 163 YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTT 222
+ + E + + + L+YL + +I+H D+KP NILLDE I+DF +A +
Sbjct: 111 HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAML-P 166
Query: 223 KEGIVSSLLGARGIIGYIAPEVFSRNFGE-VSHKSDVYSFGMMIMELV 269
+E ++++ G + Y+APE+FS G S D +S G+ EL+
Sbjct: 167 RETQITTMAGTK---PYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELL 211
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 162 QYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAK-LC 220
Q L E + + + +GL+Y+H S +++H D+KP N+L++E+ KI DFG+A+ LC
Sbjct: 154 QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC 210
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 273
T+ + Y APE+ + E + D++S G + E++ +
Sbjct: 211 TSPAEHQYFMTEYVATRWYRAPELML-SLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
K + + + E+ + + +V G ++ E M GSL++ + K
Sbjct: 44 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL------KK 97
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
+ + + ++ I + KGL YL KI+H D+KP NIL++ K+ DFG++
Sbjct: 98 AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + +S +G R Y++PE V +SD++S G+ ++E+
Sbjct: 156 I--DSMANSFVGTR---SYMSPERLQGTHYSV--QSDIWSMGLSLVEMA 197
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 162 QYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCT 221
Q+L + + + I +GL+Y+H S +LH D+KP N+LL+ KI DFGLA++
Sbjct: 121 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 177
Query: 222 TKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCK 272
L Y APE+ + G + D++S G ++ E++ +
Sbjct: 178 PDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 227
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 11/117 (9%)
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAK-L 219
Q L E + + + +GL+Y+H S +++H D+KP N+L++E+ KI DFG+A+ L
Sbjct: 152 SQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208
Query: 220 CTT---KEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKN 273
CT+ + ++ + R Y APE+ + E + D++S G + E++ +
Sbjct: 209 CTSPAEHQYFMTEYVATR---WYRAPELML-SLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 44/200 (22%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
VKKL+ F++ Q Y+ +L VN H N+++LL
Sbjct: 52 VKKLSRPFQN---QTHAKRAYRELVLLKCVN---------HKNIISLLNV---------- 89
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQY----LRWEKMYEIVIGIAKGLEYLHHGCSTK 190
F P +LE+F V + CQ L E+M ++ + G+++LH S
Sbjct: 90 --FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH---SAG 144
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ +T + ++ Y APEV +
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRY----YRAPEVILGMGY 200
Query: 250 GEVSHKSDVYSFGMMIMELV 269
E D++S G ++ ELV
Sbjct: 201 KE---NVDIWSVGCIMGELV 217
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 93 QGGFGG--VYKGRLLDDFVN----EVASISRTS-HVNVVTLLGFCLEGNNRALIYEF-MP 144
QG F G V R+L DF + E+ ++ + H NV+ +C E +R L +
Sbjct: 52 QGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRY--YCSETTDRFLYIALELC 109
Query: 145 NGSLEKFVYNGDTSKPCQYLRWEKMYE---IVIGIAKGLEYLHHGCSTKILHFDIKPHNI 201
N +L+ V + + S + L+ +K Y ++ IA G+ +LH S KI+H D+KP NI
Sbjct: 110 NLNLQDLVESKNVSD--ENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNI 164
Query: 202 LLD-------------EDFCPKISDFGL-AKLCTTKEGIVSSLLGARGIIGYIAPEVFSR 247
L+ E+ ISDFGL KL + + +L G G+ APE+
Sbjct: 165 LVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEE 224
Query: 248 NFGEVSHKS-DVYSFG 262
+ +S D++S G
Sbjct: 225 STKRRLTRSIDIFSMG 240
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 93 QGGFGG--VYKGRLLDDFVN----EVASISRTS-HVNVVTLLGFCLEGNNRALIYEF-MP 144
QG F G V R+L DF + E+ ++ + H NV+ +C E +R L +
Sbjct: 52 QGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRY--YCSETTDRFLYIALELC 109
Query: 145 NGSLEKFVYNGDTSKPCQYLRWEKMYE---IVIGIAKGLEYLHHGCSTKILHFDIKPHNI 201
N +L+ V + + S + L+ +K Y ++ IA G+ +LH S KI+H D+KP NI
Sbjct: 110 NLNLQDLVESKNVSD--ENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNI 164
Query: 202 LLD-------------EDFCPKISDFGL-AKLCTTKEGIVSSLLGARGIIGYIAPEVFSR 247
L+ E+ ISDFGL KL + + +L G G+ APE+
Sbjct: 165 LVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEE 224
Query: 248 NFGEVSHKS-DVYSFG 262
+ +S D++S G
Sbjct: 225 STKRRLTRSIDIFSMG 240
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
K + + + E+ + + +V G ++ E M GSL++ + K
Sbjct: 44 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL------KK 97
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
+ + + ++ I + KGL YL KI+H D+KP NIL++ K+ DFG++
Sbjct: 98 AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + +S +G R Y++PE V +SD++S G+ ++E+
Sbjct: 156 I--DSMANSFVGTR---SYMSPERLQGTHYSV--QSDIWSMGLSLVEMA 197
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 119 SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
H N++TL +G ++ E G L + ++ + ++ I K
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQ------KFFSEREASAVLFTITK 127
Query: 179 GLEYLHHGCSTKILHFDIKPHNIL-LDEDFCP---KISDFGLAKLCTTKEGIVSSLLGAR 234
+EYLH + ++H D+KP NIL +DE P +I DFG AK + G++ +
Sbjct: 128 TVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYT- 183
Query: 235 GIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
++APEV R + + D++S G+++ + +G D + E
Sbjct: 184 --ANFVAPEVLERQGYDAA--CDIWSLGVLLYTXLTGYTPFANGPDDTPE 229
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 18/162 (11%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 169
E+ ++ H +++ L + ++ E++ G L ++ C++ R E+M
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--------CKHGRVEEM 111
Query: 170 --YEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV 227
+ I ++Y H ++H D+KP N+LLD KI+DFGL+ + + E +
Sbjct: 112 EARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 168
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+S G Y APEV S + D++S G+++ L+
Sbjct: 169 TSC----GSPNYAAPEVISGRL-YAGPEVDIWSCGVILYALL 205
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
K + + + E+ + + +V G ++ E M GSL++ + K
Sbjct: 71 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL------KK 124
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
+ + + ++ I + KGL YL KI+H D+KP NIL++ K+ DFG++
Sbjct: 125 AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 182
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + +S +G R Y++PE V +SD++S G+ ++E+
Sbjct: 183 I--DSMANSFVGTR---SYMSPERLQGTHYSV--QSDIWSMGLSLVEMA 224
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
K + + + E+ + + +V G ++ E M GSL++ + K
Sbjct: 44 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL------KK 97
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
+ + + ++ I + KGL YL KI+H D+KP NIL++ K+ DFG++
Sbjct: 98 AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + +S +G R Y++PE V +SD++S G+ ++E+
Sbjct: 156 I--DSMANSFVGTR---SYMSPERLQGTHYSV--QSDIWSMGLSLVEMA 197
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
K + + + E+ + + +V G ++ E M GSL++ + K
Sbjct: 44 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL------KK 97
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
+ + + ++ I + KGL YL KI+H D+KP NIL++ K+ DFG++
Sbjct: 98 AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + +S +G R Y++PE V +SD++S G+ ++E+
Sbjct: 156 I--DSMANSFVGTR---SYMSPERLQGTHYSV--QSDIWSMGLSLVEMA 197
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Query: 106 DDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLR 165
+ + EV + + H N++ L F + L+ E G L + + R
Sbjct: 77 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 136
Query: 166 WEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLD---EDFCPKISDFGLAKLCTT 222
I+ + G+ Y+H KI+H D+KP N+LL+ +D +I DFGL+
Sbjct: 137 ------IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 187
Query: 223 KEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV-GC 271
+ + + G YIAPEV + E K DV+S G+++ L+ GC
Sbjct: 188 SKKMKDKI----GTAYYIAPEVLHGTYDE---KCDVWSTGVILYILLSGC 230
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
K + + + E+ + + +V G ++ E M GSL++ + K
Sbjct: 44 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL------KK 97
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
+ + + ++ I + KGL YL KI+H D+KP NIL++ K+ DFG++
Sbjct: 98 AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + +S +G R Y++PE V +SD++S G+ ++E+
Sbjct: 156 I--DSMANSFVGTR---SYMSPERLQGTHYSV--QSDIWSMGLSLVEMA 197
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 20/127 (15%)
Query: 166 WEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFG-LAKLCTTKE 224
W + + ++ +A +LH S ++H D+KP NI L K+ DFG L +L T
Sbjct: 160 WGYLRDTLLALA----HLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA 212
Query: 225 GIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSE 284
G V G Y+APE+ ++G +DV+S G+ I+E V C L G + +
Sbjct: 213 GEVQE-----GDPRYMAPELLQGSYGTA---ADVFSLGLTILE-VACNMELPHGGEGWQQ 263
Query: 285 V---YFP 288
+ Y P
Sbjct: 264 LRQGYLP 270
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 27/188 (14%)
Query: 178 KGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
+G++YLH + +++H D+K N+ L++D KI DFGLA +L G
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTP--- 206
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQ 297
YIAPEV + S + D++S G ++ L+ K ++ + + +
Sbjct: 207 NYIAPEVLCKKGH--SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI---------K 255
Query: 298 DREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI--EMLQGSTEALQIPPT 355
E+ +P R N +A +I + A P+ RP + E++ E +++ PT
Sbjct: 256 KNEYSVP----RHINPVASALI---RRMLHADPTLRPSVAELLTDEFFTSGYAPMRL-PT 307
Query: 356 PFLSSPPR 363
L+ PPR
Sbjct: 308 SCLTVPPR 315
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 44/203 (21%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N+++LL
Sbjct: 54 IKKLSRPFQN---QTHAKRAYRELVLMKXVN---------HKNIISLLNV---------- 91
Query: 140 YEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEKMYEIVIGIAKGLEYLHHGCSTK 190
F P +LE+F VY + + + Q L E+M ++ + G+++LH S
Sbjct: 92 --FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 202
Query: 250 GEVSHKSDVYSFGMMIMELVGCK 272
E D++S G ++ E+V K
Sbjct: 203 KE---NVDIWSVGCIMGEMVRHK 222
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 169
E+ ++ H ++ L N ++ E+ P G L ++ + D L E+
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR------LSEEET 110
Query: 170 YEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGL-AKLCTTKEGIVS 228
+ I + Y+H S H D+KP N+L DE K+ DFGL AK K+ +
Sbjct: 111 RVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQ 167
Query: 229 SLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ G+ + Y APE+ + + ++DV+S G+++ L+
Sbjct: 168 TCCGS---LAYAAPELI-QGKSYLGSEADVWSMGILLYVLM 204
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 41/213 (19%)
Query: 86 SFKDKLGQGGFGGVYKGRLLDD--------------------FVNEVASISRTSHVNVVT 125
K++LG GGFG V + D + E+ + + +H NVV+
Sbjct: 18 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 126 L------LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
L + L E+ G L K++ + C L+ + ++ I+
Sbjct: 78 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISSA 134
Query: 180 LEYLHHGCSTKILHFDIKPHNILLD---EDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
L YLH +I+H D+KP NI+L + KI D G AK E + G
Sbjct: 135 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV----GT 187
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ Y+APE+ + V+ D +SFG + E +
Sbjct: 188 LQYLAPELLEQKKYTVT--VDYWSFGTLAFECI 218
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKM 169
E+ ++ H +++ L + ++ E++ G L ++ C++ R E+M
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--------CKHGRVEEM 111
Query: 170 --YEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV 227
+ I ++Y H ++H D+KP N+LLD KI+DFGL+ + + E +
Sbjct: 112 EARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 168
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
S G Y APEV S + D++S G+++ L+
Sbjct: 169 DSC----GSPNYAAPEVISGRL-YAGPEVDIWSCGVILYALL 205
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 86 SFKDKLGQGGFGGVYKGRLLDD--------------------FVNEVASISRTSHVNVVT 125
K++LG GGFG V + D + E+ + + +H NVV+
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 126 LLGF-----CLEGNNRALI-YEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
L N+ L+ E+ G L K++ + C L+ + ++ I+
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISSA 133
Query: 180 LEYLHHGCSTKILHFDIKPHNILLD---EDFCPKISDFGLAKLCTTKEGIVSSLLGARGI 236
L YLH +I+H D+KP NI+L + KI D G AK E + G
Sbjct: 134 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV----GT 186
Query: 237 IGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ Y+APE+ + V+ D +SFG + E +
Sbjct: 187 LQYLAPELLEQKKYTVT--VDYWSFGTLAFECI 217
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 95/222 (42%), Gaps = 52/222 (23%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N++ LL
Sbjct: 54 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIIGLLNV---------- 91
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P SLE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 92 --FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYI-APEV-FSRN 248
I+H D+KP NI++ D KI DFGLA+ T S ++ + Y APEV
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-----SFMMEPEVVTRYYRAPEVILGMG 201
Query: 249 FGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHW 290
+ E D++S G ++ E+V C L G D Y W
Sbjct: 202 YKE---NVDIWSVGCIMGEMV-CHKILFPGRD-----YIDQW 234
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 108 FVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWE 167
+ EV + + H N++ L F + L+ E G L + + R
Sbjct: 73 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-- 130
Query: 168 KMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLD---EDFCPKISDFGLAKLCTTKE 224
I+ + G+ Y+H KI+H D+KP N+LL+ +D +I DFGL+ +
Sbjct: 131 ----IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183
Query: 225 GIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMI-MELVGC 271
+ + G YIAPEV + E K DV+S G+++ + L GC
Sbjct: 184 KMKDKI----GTAYYIAPEVLHGTYDE---KCDVWSTGVILYILLSGC 224
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 44/203 (21%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N+++LL
Sbjct: 54 IKKLSRPFQN---QTHAKRAYRELVLMKXVN---------HKNIISLLNV---------- 91
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P +LE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 92 --FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 202
Query: 250 GEVSHKSDVYSFGMMIMELVGCK 272
E D++S G ++ E+V K
Sbjct: 203 KE---NVDIWSVGCIMGEMVRHK 222
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Query: 106 DDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLR 165
+ + EV + + H N++ L F + L+ E G L + + R
Sbjct: 94 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 153
Query: 166 WEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLD---EDFCPKISDFGLAKLCTT 222
I+ + G+ Y+H KI+H D+KP N+LL+ +D +I DFGL+
Sbjct: 154 ------IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 204
Query: 223 KEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMI-MELVGC 271
+ + + G YIAPEV + E K DV+S G+++ + L GC
Sbjct: 205 SKKMKDKI----GTAYYIAPEVLHGTYDE---KCDVWSTGVILYILLSGC 247
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 44/200 (22%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N++ LL
Sbjct: 54 IKKLSRPFQN---QTHAKRAYRELVLMKVVN---------HKNIIGLLNV---------- 91
Query: 140 YEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEKMYEIVIGIAKGLEYLHHGCSTK 190
F P SLE+F VY + + S+ Q L E+M ++ + G+++LH S
Sbjct: 92 --FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 202
Query: 250 GEVSHKSDVYSFGMMIMELV 269
E D++S G ++ E++
Sbjct: 203 KE---NVDIWSVGCIMGEMI 219
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 27/188 (14%)
Query: 178 KGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
+G++YLH + +++H D+K N+ L++D KI DFGLA L G
Sbjct: 137 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP--- 190
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQ 297
YIAPEV + S + D++S G ++ L+ K ++ + + +
Sbjct: 191 NYIAPEVLCKKGH--SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI---------K 239
Query: 298 DREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI--EMLQGSTEALQIPPT 355
E+ +P R N +A +I + A P+ RP + E++ E +++ PT
Sbjct: 240 KNEYSVP----RHINPVASALI---RRMLHADPTLRPSVAELLTDEFFTSGYAPMRL-PT 291
Query: 356 PFLSSPPR 363
L+ PPR
Sbjct: 292 SCLTVPPR 299
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Query: 106 DDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLR 165
+ + EV + + H N++ L F + L+ E G L + + R
Sbjct: 95 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 154
Query: 166 WEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLD---EDFCPKISDFGLAKLCTT 222
I+ + G+ Y+H KI+H D+KP N+LL+ +D +I DFGL+
Sbjct: 155 ------IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 205
Query: 223 KEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMI-MELVGC 271
+ + + G YIAPEV + E K DV+S G+++ + L GC
Sbjct: 206 SKKMKDKI----GTAYYIAPEVLHGTYDE---KCDVWSTGVILYILLSGC 248
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 27/188 (14%)
Query: 178 KGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
+G++YLH + +++H D+K N+ L++D KI DFGLA L G
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP--- 206
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQ 297
YIAPEV + S + D++S G ++ L+ K ++ + + +
Sbjct: 207 NYIAPEVLCKKGH--SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI---------K 255
Query: 298 DREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI--EMLQGSTEALQIPPT 355
E+ +P R N +A +I + A P+ RP + E++ E +++ PT
Sbjct: 256 KNEYSVP----RHINPVASALI---RRMLHADPTLRPSVAELLTDEFFTSGYAPMRL-PT 307
Query: 356 PFLSSPPR 363
L+ PPR
Sbjct: 308 SCLTVPPR 315
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 106/271 (39%), Gaps = 54/271 (19%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + E+ + H N++ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCS 188
+ + LI E+ P G L K + K C + ++ I+ +A L Y H
Sbjct: 91 YFYDRRRIYLILEYAPRGELYK-----ELQKSCTFDE-QRTATIMEELADALMYCH---G 141
Query: 189 TKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRN 248
K++H DIKP N+LL KI+DFG + + G + Y+ PE+
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC-----GTLDYLPPEMIEGR 196
Query: 249 FGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLPGVVT 308
+ K D++ G++ EL+ +S S +E Y R V+ D K P V
Sbjct: 197 MH--NEKVDLWCIGVLCYELLVGNPPFESA--SHNETY-----RRIVKVD--LKFPASVP 245
Query: 309 RKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
++ K+ ++ PS+R P+ +V
Sbjct: 246 TGAQDLISKL-------LRHNPSERLPLAQV 269
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I GLE++H+ +++ D+KP NILLDE +ISD GLA + K+ S G
Sbjct: 300 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-----G 351
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
GY+APEV + S +D +S G M+ +L+
Sbjct: 352 THGYMAPEVLQKGVAYDS-SADWFSLGCMLFKLL 384
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I GLE++H+ +++ D+KP NILLDE +ISD GLA + K+ S G
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-----G 352
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
GY+APEV + S +D +S G M+ +L+
Sbjct: 353 THGYMAPEVLQKGVAYDS-SADWFSLGCMLFKLL 385
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 27/188 (14%)
Query: 178 KGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
+G++YLH + +++H D+K N+ L++D KI DFGLA L G
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTP--- 206
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQ 297
YIAPEV + S + D++S G ++ L+ K ++ + + +
Sbjct: 207 NYIAPEVLCKKGH--SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI---------K 255
Query: 298 DREFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEVI--EMLQGSTEALQIPPT 355
E+ +P R N +A +I + A P+ RP + E++ E +++ PT
Sbjct: 256 KNEYSVP----RHINPVASALI---RRMLHADPTLRPSVAELLTDEFFTSGYAPMRL-PT 307
Query: 356 PFLSSPPR 363
L+ PPR
Sbjct: 308 SCLTVPPR 315
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 18/187 (9%)
Query: 89 DKLGQGGFGGVYKGRLLDDFVNEVASISRTS-HVNVVTLLGFCLEGNNRALIYEFMPNGS 147
D G G F L + + EV + + S H N++ L L+++ M G
Sbjct: 51 DVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGE 110
Query: 148 LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDF 207
L ++ T L ++ +I+ + + + LH I+H D+KP NILLD+D
Sbjct: 111 LFDYLTEKVT------LSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDM 161
Query: 208 CPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV----FSRNFGEVSHKSDVYSFGM 263
K++DFG + C G L G Y+APE+ + N + D++S G+
Sbjct: 162 NIKLTDFGFS--CQLDPG--EKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 217
Query: 264 MIMELVG 270
++ L+
Sbjct: 218 IMYTLLA 224
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 37/200 (18%)
Query: 93 QGGFGG--VYKGRLLDDFVN----EVASISRTS-HVNVVTLLGFCLEGNNRALIYEF-MP 144
QG F G V R+L DF + E+ ++ + H NV+ +C E +R L +
Sbjct: 34 QGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRY--YCSETTDRFLYIALELC 91
Query: 145 NGSLEKFVYNGDTSKPCQYLRWEKMYE---IVIGIAKGLEYLHHGCSTKILHFDIKPHNI 201
N +L+ V + + S + L+ +K Y ++ IA G+ +LH S KI+H D+KP NI
Sbjct: 92 NLNLQDLVESKNVSD--ENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNI 146
Query: 202 LLD-------------EDFCPKISDFGL-AKLCTTKEGIVSSLLGARGIIGYIAPEVF-- 245
L+ E+ ISDFGL KL + + +L G G+ APE+
Sbjct: 147 LVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEE 206
Query: 246 SRNFG---EVSHKSDVYSFG 262
S N ++ D++S G
Sbjct: 207 SNNLQTKRRLTRSIDIFSMG 226
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 44/203 (21%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N+++LL
Sbjct: 54 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIISLLNV---------- 91
Query: 140 YEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEKMYEIVIGIAKGLEYLHHGCSTK 190
F P +LE+F VY + + + Q L E+M ++ + G+++LH S
Sbjct: 92 --FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 202
Query: 250 GEVSHKSDVYSFGMMIMELVGCK 272
E D++S G ++ E+V K
Sbjct: 203 KE---NVDIWSVGCIMGEMVRHK 222
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I GLE++H+ +++ D+KP NILLDE +ISD GLA + K+ S G
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-----G 352
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
GY+APEV + S +D +S G M+ +L+
Sbjct: 353 THGYMAPEVLQKGVAYDS-SADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I GLE++H+ +++ D+KP NILLDE +ISD GLA + K+ S G
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-----G 352
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
GY+APEV + S +D +S G M+ +L+
Sbjct: 353 THGYMAPEVLQKGVAYDS-SADWFSLGCMLFKLL 385
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 44/203 (21%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N+++LL
Sbjct: 47 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIISLLNV---------- 84
Query: 140 YEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEKMYEIVIGIAKGLEYLHHGCSTK 190
F P +LE+F VY + + + Q L E+M ++ + G+++LH S
Sbjct: 85 --FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH---SAG 139
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 195
Query: 250 GEVSHKSDVYSFGMMIMELVGCK 272
E D++S G ++ E+V K
Sbjct: 196 KE---NVDIWSVGCIMGEMVRHK 215
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I GL++LH S I++ D+K NILLD+D KI+DFG+ K + + G
Sbjct: 128 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTP- 183
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
YIAPE+ + +H D +SFG+++ E++
Sbjct: 184 --DYIAPEILLGQ--KYNHSVDWWSFGVLLYEML 213
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 44/200 (22%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N++ LL
Sbjct: 56 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIIGLLNV---------- 93
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P SLE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 94 --FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 148
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T +V ++ Y APEV +
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRY----YRAPEVILGMGY 204
Query: 250 GEVSHKSDVYSFGMMIMELV 269
E D++S G ++ E++
Sbjct: 205 KE---NVDIWSVGCIMGEMI 221
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 95/222 (42%), Gaps = 52/222 (23%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N++ LL
Sbjct: 54 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIIGLLNV---------- 91
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P SLE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 92 --FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYI-APEV-FSRN 248
I+H D+KP NI++ D KI DFGLA+ T S ++ + Y APEV
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-----SFMMEPEVVTRYYRAPEVILGMG 201
Query: 249 FGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHW 290
+ E D++S G ++ E+V C L G D Y W
Sbjct: 202 YKE---NVDLWSVGCIMGEMV-CHKILFPGRD-----YIDQW 234
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 44/203 (21%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N+++LL
Sbjct: 54 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIISLLNV---------- 91
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P +LE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 92 --FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 202
Query: 250 GEVSHKSDVYSFGMMIMELVGCK 272
E D++S G ++ E+V K
Sbjct: 203 KE---NVDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 44/203 (21%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N+++LL
Sbjct: 55 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIISLLNV---------- 92
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P +LE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 93 --FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 147
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 203
Query: 250 GEVSHKSDVYSFGMMIMELVGCK 272
E D++S G ++ E+V K
Sbjct: 204 KE---NVDIWSVGCIMGEMVRHK 223
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 44/203 (21%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N+++LL
Sbjct: 55 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIISLLNV---------- 92
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P +LE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 93 --FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 147
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 203
Query: 250 GEVSHKSDVYSFGMMIMELVGCK 272
E D++S G ++ E+V K
Sbjct: 204 KE---NVDIWSVGCIMGEMVRHK 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 44/203 (21%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N+++LL
Sbjct: 48 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIISLLNV---------- 85
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P +LE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 86 --FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 140
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 196
Query: 250 GEVSHKSDVYSFGMMIMELVGCK 272
E D++S G ++ E+V K
Sbjct: 197 KE---NVDIWSVGCIMGEMVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 44/203 (21%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N+++LL
Sbjct: 47 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIISLLNV---------- 84
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P +LE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 85 --FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 139
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 195
Query: 250 GEVSHKSDVYSFGMMIMELVGCK 272
E D++S G ++ E+V K
Sbjct: 196 KE---NVDIWSVGCIMGEMVRHK 215
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 44/203 (21%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N+++LL
Sbjct: 53 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIISLLNV---------- 90
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P +LE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 91 --FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 145
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 201
Query: 250 GEVSHKSDVYSFGMMIMELVGCK 272
E D++S G ++ E+V K
Sbjct: 202 KE---NVDIWSVGCIMGEMVRHK 221
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 50/221 (22%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N++ LL
Sbjct: 59 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIIGLLNV---------- 96
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P SLE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 97 --FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 151
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 207
Query: 250 GEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHW 290
E D++S G ++ E+V C L G D Y W
Sbjct: 208 KE---NVDLWSVGCIMGEMV-CHKILFPGRD-----YIDQW 239
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 44/203 (21%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N+++LL
Sbjct: 54 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIISLLNV---------- 91
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P +LE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 92 --FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 202
Query: 250 GEVSHKSDVYSFGMMIMELVGCK 272
E D++S G ++ E+V K
Sbjct: 203 KE---NVDIWSVGCIMGEMVRHK 222
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 18/187 (9%)
Query: 89 DKLGQGGFGGVYKGRLLDDFVNEVASISRTS-HVNVVTLLGFCLEGNNRALIYEFMPNGS 147
D G G F L + + EV + + S H N++ L L+++ M G
Sbjct: 38 DVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGE 97
Query: 148 LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDF 207
L ++ T L ++ +I+ + + + LH I+H D+KP NILLD+D
Sbjct: 98 LFDYLTEKVT------LSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDM 148
Query: 208 CPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV----FSRNFGEVSHKSDVYSFGM 263
K++DFG + C G L G Y+APE+ + N + D++S G+
Sbjct: 149 NIKLTDFGFS--CQLDPG--EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 204
Query: 264 MIMELVG 270
++ L+
Sbjct: 205 IMYTLLA 211
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 44/200 (22%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N++ LL
Sbjct: 54 IKKLSRPFQN---QTHAKRAYRELVLMKVVN---------HKNIIGLLNV---------- 91
Query: 140 YEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEKMYEIVIGIAKGLEYLHHGCSTK 190
F P SLE+F VY + + S+ Q L E+M ++ + G+++LH S
Sbjct: 92 --FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 202
Query: 250 GEVSHKSDVYSFGMMIMELV 269
E D++S G ++ E++
Sbjct: 203 KE---NVDIWSVGCIMGEMI 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 44/203 (21%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N+++LL
Sbjct: 48 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIISLLNV---------- 85
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P +LE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 86 --FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 140
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 196
Query: 250 GEVSHKSDVYSFGMMIMELVGCK 272
E D++S G ++ E+V K
Sbjct: 197 KE---NVDIWSVGCIMGEMVRHK 216
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I GL++LH S I++ D+K NILLD+D KI+DFG+ K + + G
Sbjct: 127 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTP- 182
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
YIAPE+ + +H D +SFG+++ E++
Sbjct: 183 --DYIAPEILLGQ--KYNHSVDWWSFGVLLYEML 212
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 44/203 (21%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N+++LL
Sbjct: 92 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIISLLNV---------- 129
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P +LE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 130 --FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 184
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 240
Query: 250 GEVSHKSDVYSFGMMIMELVGCK 272
E D++S G ++ E+V K
Sbjct: 241 KE---NVDIWSVGCIMGEMVRHK 260
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 18/187 (9%)
Query: 89 DKLGQGGFGGVYKGRLLDDFVNEVASISRTS-HVNVVTLLGFCLEGNNRALIYEFMPNGS 147
D G G F L + + EV + + S H N++ L L+++ M G
Sbjct: 51 DVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGE 110
Query: 148 LEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDF 207
L ++ T L ++ +I+ + + + LH I+H D+KP NILLD+D
Sbjct: 111 LFDYLTEKVT------LSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDM 161
Query: 208 CPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV----FSRNFGEVSHKSDVYSFGM 263
K++DFG + C G L G Y+APE+ + N + D++S G+
Sbjct: 162 NIKLTDFGFS--CQLDPG--EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 217
Query: 264 MIMELVG 270
++ L+
Sbjct: 218 IMYTLLA 224
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 50/221 (22%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N++ LL
Sbjct: 48 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIIGLLNV---------- 85
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P SLE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 86 --FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 140
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 196
Query: 250 GEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHW 290
E D++S G ++ E+V C L G D Y W
Sbjct: 197 KE---NVDLWSVGCIMGEMV-CHKILFPGRD-----YIDQW 228
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 37/213 (17%)
Query: 87 FKDKLGQGGFGGVYKGRLLDDFVN-------------EVASISRTSHVNVVTLLGFCLEG 133
++ +G+G FG V++G+ + V A I +T + +LGF
Sbjct: 46 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 134 NNRA-------LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH- 185
N L+ ++ +GSL ++ + E M ++ + A GL +LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV-------EGMIKLALSTASGLAHLHME 158
Query: 186 --GCSTK--ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR-GIIGYI 240
G K I H D+K NIL+ ++ I+D GLA + + R G Y+
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 218
Query: 241 APEVFSRNFG----EVSHKSDVYSFGMMIMELV 269
APEV + E ++D+Y+ G++ E+
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 44/203 (21%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N+++LL
Sbjct: 92 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIISLLNV---------- 129
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P +LE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 130 --FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 184
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 240
Query: 250 GEVSHKSDVYSFGMMIMELVGCK 272
E D++S G ++ E+V K
Sbjct: 241 KE---NVDIWSVGCIMGEMVRHK 260
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 37/213 (17%)
Query: 87 FKDKLGQGGFGGVYKGRLLDDFVN-------------EVASISRTSHVNVVTLLGFCLEG 133
++ +G+G FG V++G+ + V A I +T + +LGF
Sbjct: 8 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 134 NNRA-------LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH- 185
N L+ ++ +GSL ++ + E M ++ + A GL +LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV-------EGMIKLALSTASGLAHLHME 120
Query: 186 --GCSTK--ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR-GIIGYI 240
G K I H D+K NIL+ ++ I+D GLA + + R G Y+
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 180
Query: 241 APEVFSRNFG----EVSHKSDVYSFGMMIMELV 269
APEV + E ++D+Y+ G++ E+
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 101 KGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKP 160
K + + + E+ + + +V G ++ E M GSL++ + K
Sbjct: 47 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL------KK 100
Query: 161 CQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC 220
+ + + ++ I + KGL YL KI+H D+KP NIL++ K+ DFG++
Sbjct: 101 AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 158
Query: 221 TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + + +G R Y++PE V +SD++S G+ ++E+
Sbjct: 159 IDE--MANEFVGTR---SYMSPERLQGTHYSV--QSDIWSMGLSLVEMA 200
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 44/203 (21%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N+++LL
Sbjct: 54 IKKLSRPFQN---QTHAKRAYRELVLMKXVN---------HKNIISLLNV---------- 91
Query: 140 YEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEKMYEIVIGIAKGLEYLHHGCSTK 190
F P +LE+F VY + + + Q L E+M ++ + G+++LH S
Sbjct: 92 --FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 202
Query: 250 GEVSHKSDVYSFGMMIMELVGCK 272
E D++S G ++ E+V K
Sbjct: 203 KE---NVDIWSVGCIMGEMVRHK 222
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 44/200 (22%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N++ LL
Sbjct: 54 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIIGLLNV---------- 91
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P SLE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 92 --FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY----YRAPEVILGMGY 202
Query: 250 GEVSHKSDVYSFGMMIMELV 269
E D++S G ++ E++
Sbjct: 203 KE---NVDIWSVGCIMGEMI 219
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 37/213 (17%)
Query: 87 FKDKLGQGGFGGVYKGRLLDDFVN-------------EVASISRTSHVNVVTLLGFCLEG 133
++ +G+G FG V++G+ + V A I +T + +LGF
Sbjct: 33 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 134 NNRA-------LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH- 185
N L+ ++ +GSL ++ + E M ++ + A GL +LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV-------EGMIKLALSTASGLAHLHME 145
Query: 186 --GCSTK--ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR-GIIGYI 240
G K I H D+K NIL+ ++ I+D GLA + + R G Y+
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 205
Query: 241 APEVFSRNFG----EVSHKSDVYSFGMMIMELV 269
APEV + E ++D+Y+ G++ E+
Sbjct: 206 APEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 37/213 (17%)
Query: 87 FKDKLGQGGFGGVYKGRLLDDFVN-------------EVASISRTSHVNVVTLLGFCLEG 133
++ +G+G FG V++G+ + V A I +T + +LGF
Sbjct: 7 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 134 NNRA-------LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH- 185
N L+ ++ +GSL ++ + E M ++ + A GL +LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV-------EGMIKLALSTASGLAHLHME 119
Query: 186 --GCSTK--ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR-GIIGYI 240
G K I H D+K NIL+ ++ I+D GLA + + R G Y+
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 179
Query: 241 APEVFSRNFG----EVSHKSDVYSFGMMIMELV 269
APEV + E ++D+Y+ G++ E+
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 37/213 (17%)
Query: 87 FKDKLGQGGFGGVYKGRLLDDFVN-------------EVASISRTSHVNVVTLLGFCLEG 133
++ +G+G FG V++G+ + V A I +T + +LGF
Sbjct: 10 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 134 NNRA-------LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH- 185
N L+ ++ +GSL ++ + E M ++ + A GL +LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV-------EGMIKLALSTASGLAHLHME 122
Query: 186 --GCSTK--ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR-GIIGYI 240
G K I H D+K NIL+ ++ I+D GLA + + R G Y+
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 182
Query: 241 APEVFSRNFG----EVSHKSDVYSFGMMIMELV 269
APEV + E ++D+Y+ G++ E+
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 65/272 (23%)
Query: 89 DKLGQGGFGGVYK--GRL-------------LDDFVNEVASISRT-------SHVNVVTL 126
+K+G G FG V+K RL L V+E ++ H +VV
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 72
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
E ++ + E+ GSL + + + Y + ++ ++++ + +GL Y+H
Sbjct: 73 FSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVGRGLRYIH-- 128
Query: 187 CSTKILHFDIKPHNILLDEDFCP-------------------KISDFGLAKLCTTKEGIV 227
S ++H DIKP NI + P KI D G T+ +
Sbjct: 129 -SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG----HVTR---I 180
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYF 287
SS G ++A EV N+ + K+D+++ + ++ G + +G
Sbjct: 181 SSPQVEEGDSRFLANEVLQENYTHLP-KADIFALALTVVXAAGAEPLPRNGDQ------- 232
Query: 288 PHWIYRHVEQDREFKLPGVVTRKENEIAKKMI 319
+ + Q R ++P V++++ E+ K MI
Sbjct: 233 ----WHEIRQGRLPRIPQVLSQEFTELLKVMI 260
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 111 EVASISRTSHVNVVTLLGFCLEGNNRA--LIYEFMPNGSLEKFVYNGDTS---KPCQYLR 165
E+A + H NV++L L +R L++++ + ++ + KP Q R
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 166 WEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILL----DEDFCPKISDFGLAKLCT 221
+ ++ I G+ YLH + +LH D+KP NIL+ E KI+D G A+L
Sbjct: 128 -GMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 183
Query: 222 TKEGIVSSLLGARGIIGYIAPEVF--SRNFGEVSHKSDVYSFGMMIMELVGCK---NNLD 276
+ ++ L Y APE+ +R++ + D+++ G + EL+ + +
Sbjct: 184 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKA---IDIWAIGCIFAELLTSEPIFHCRQ 240
Query: 277 SGVDSSSEVYFPHWIYRHVEQDREFKLPGVVTRKENEIAKKM 318
+ +S+ Y H + DR F + G K+ E KKM
Sbjct: 241 EDIKTSNP-------YHHDQLDRIFNVMGFPADKDWEDIKKM 275
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 44/200 (22%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N++ LL
Sbjct: 54 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIIGLLNV---------- 91
Query: 140 YEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEKMYEIVIGIAKGLEYLHHGCSTK 190
F P SLE+F VY + + S+ Q L E+M ++ + G+++LH S
Sbjct: 92 --FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 202
Query: 250 GEVSHKSDVYSFGMMIMELV 269
E D++S G ++ E++
Sbjct: 203 KE---NVDIWSVGCIMGEMI 219
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 37/213 (17%)
Query: 87 FKDKLGQGGFGGVYKGRLLDDFVN-------------EVASISRTSHVNVVTLLGFCLEG 133
++ +G+G FG V++G+ + V A I +T + +LGF
Sbjct: 13 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 134 NNRA-------LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH- 185
N L+ ++ +GSL ++ + E M ++ + A GL +LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV-------EGMIKLALSTASGLAHLHME 125
Query: 186 --GCSTK--ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR-GIIGYI 240
G K I H D+K NIL+ ++ I+D GLA + + R G Y+
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 185
Query: 241 APEVFSRNFG----EVSHKSDVYSFGMMIMELV 269
APEV + E ++D+Y+ G++ E+
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 44/200 (22%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N++ LL
Sbjct: 54 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIIGLLNV---------- 91
Query: 140 YEFMPNGSLEKF--VY------NGDTSKPCQY-LRWEKMYEIVIGIAKGLEYLHHGCSTK 190
F P SLE+F VY + + S+ Q L E+M ++ + G+++LH S
Sbjct: 92 --FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 202
Query: 250 GEVSHKSDVYSFGMMIMELV 269
E D++S G ++ E++
Sbjct: 203 KE---NVDIWSVGCIMGEMI 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 44/200 (22%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N++ LL
Sbjct: 54 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIIGLLNV---------- 91
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P SLE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 92 --FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 202
Query: 250 GEVSHKSDVYSFGMMIMELV 269
E D++S G ++ E++
Sbjct: 203 KE---NVDIWSVGCIMGEMI 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 44/200 (22%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N++ LL
Sbjct: 55 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIIGLLNV---------- 92
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P SLE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 93 --FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 147
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 203
Query: 250 GEVSHKSDVYSFGMMIMELV 269
E D++S G ++ E++
Sbjct: 204 KE---NVDIWSVGCIMGEMI 220
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 16/166 (9%)
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQY 163
L EV + +H N+V L LI E+ G + + V +G +
Sbjct: 58 LQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR 117
Query: 164 LRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTK 223
++ + I ++Y H +I+H D+K N+LLD D KI+DFG + T
Sbjct: 118 SKFRQ-------IVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167
Query: 224 EGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G + + GA Y APE+F + + DV+S G+++ LV
Sbjct: 168 -GKLDAFCGAP---PYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I LEYLH S +++ DIK N++LD+D KI+DFGL K + + + G
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP- 169
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
Y+APEV N + D + G+++ E++
Sbjct: 170 --EYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 199
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 44/200 (22%)
Query: 80 VKKLTNSFKDKLGQGGFGGVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALI 139
+KKL+ F++ Q Y+ +L VN H N++ LL
Sbjct: 54 IKKLSRPFQN---QTHAKRAYRELVLMKCVN---------HKNIIGLLNV---------- 91
Query: 140 YEFMPNGSLEKF-----VYNGDTSKPCQYLRWE----KMYEIVIGIAKGLEYLHHGCSTK 190
F P SLE+F V + CQ ++ E +M ++ + G+++LH S
Sbjct: 92 --FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 191 ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV-FSRNF 249
I+H D+KP NI++ D KI DFGLA+ T + ++ Y APEV +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGY 202
Query: 250 GEVSHKSDVYSFGMMIMELV 269
E D++S G ++ E++
Sbjct: 203 KE---NVDIWSVGCIMGEMI 219
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I LEYLH S +++ DIK N++LD+D KI+DFGL K + + + G
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP- 169
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
Y+APEV N + D + G+++ E++
Sbjct: 170 --EYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 199
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEK 168
E+ + + +H ++ + F + + ++ E M G L +K V N + L +
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 120
Query: 169 MYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILL---DEDFCPKISDFGLAKLCTTKEG 225
Y++++ + +YLH I+H D+KP N+LL +ED KI+DFG +K+ G
Sbjct: 121 -YQMLLAV----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----G 168
Query: 226 IVSSLLGARGIIGYIAPEVF-SRNFGEVSHKSDVYSFGMMI 265
S + G Y+APEV S + D +S G+++
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I LEYLH S +++ DIK N++LD+D KI+DFGL K + + + G
Sbjct: 117 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT-- 171
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
Y+APEV N + D + G+++ E++
Sbjct: 172 -PEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 202
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEK 168
E+ + + +H ++ + F + + ++ E M G L +K V N + L +
Sbjct: 63 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 119
Query: 169 MYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILL---DEDFCPKISDFGLAKLCTTKEG 225
Y++++ + +YLH I+H D+KP N+LL +ED KI+DFG +K+ G
Sbjct: 120 -YQMLLAV----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----G 167
Query: 226 IVSSLLGARGIIGYIAPEVF-SRNFGEVSHKSDVYSFGMMI 265
S + G Y+APEV S + D +S G+++
Sbjct: 168 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 208
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIG 238
+EY H KI+H D+KP N+LLD++ KI+DFGL+ + T + +S G
Sbjct: 120 AIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC----GSPN 172
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMI-MELVG 270
Y APEV + + DV+S G+++ + LVG
Sbjct: 173 YAAPEVINGKL-YAGPEVDVWSCGIVLYVMLVG 204
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEK 168
E+ + + +H ++ + F + + ++ E M G L +K V N + L +
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 120
Query: 169 MYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILL---DEDFCPKISDFGLAKLCTTKEG 225
Y++++ + +YLH I+H D+KP N+LL +ED KI+DFG +K+ G
Sbjct: 121 -YQMLLAV----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----G 168
Query: 226 IVSSLLGARGIIGYIAPEVF-SRNFGEVSHKSDVYSFGMMI 265
S + G Y+APEV S + D +S G+++
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEK 168
E+ + + +H ++ + F + + ++ E M G L +K V N + L +
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 120
Query: 169 MYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILL---DEDFCPKISDFGLAKLCTTKEG 225
Y++++ + +YLH I+H D+KP N+LL +ED KI+DFG +K+ G
Sbjct: 121 -YQMLLAV----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----G 168
Query: 226 IVSSLLGARGIIGYIAPEVF-SRNFGEVSHKSDVYSFGMMI 265
S + G Y+APEV S + D +S G+++
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV--SSLLGA 233
I LEYLH S +++ DIK N++LD+D KI+DFGL KEGI +++
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATMKXF 165
Query: 234 RGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G Y+APEV N + D + G+++ E++
Sbjct: 166 CGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 199
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEK 168
E+ + + +H ++ + F + + ++ E M G L +K V N + L +
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 126
Query: 169 MYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILL---DEDFCPKISDFGLAKLCTTKEG 225
Y++++ + +YLH I+H D+KP N+LL +ED KI+DFG +K+ G
Sbjct: 127 -YQMLLAV----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----G 174
Query: 226 IVSSLLGARGIIGYIAPEVF-SRNFGEVSHKSDVYSFGMMI 265
S + G Y+APEV S + D +S G+++
Sbjct: 175 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 215
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV--SSLLGA 233
I LEYLH S +++ DIK N++LD+D KI+DFGL KEGI +++
Sbjct: 119 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATMKXF 170
Query: 234 RGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G Y+APEV N + D + G+++ E++
Sbjct: 171 CGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 204
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 65/272 (23%)
Query: 89 DKLGQGGFGGVYK--GRL-------------LDDFVNEVASISRT-------SHVNVVTL 126
+K+G G FG V+K RL L V+E ++ H +VV
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
E ++ + E+ GSL + + + Y + ++ ++++ + +GL Y+H
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVGRGLRYIH-- 130
Query: 187 CSTKILHFDIKPHNILLDEDFCP-------------------KISDFGLAKLCTTKEGIV 227
S ++H DIKP NI + P KI D G T+ +
Sbjct: 131 -SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG----HVTR---I 182
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYF 287
SS G ++A EV N+ + K+D+++ + ++ G + +G
Sbjct: 183 SSPQVEEGDSRFLANEVLQENYTHLP-KADIFALALTVVCAAGAEPLPRNGDQ------- 234
Query: 288 PHWIYRHVEQDREFKLPGVVTRKENEIAKKMI 319
+ + Q R ++P V++++ E+ K MI
Sbjct: 235 ----WHEIRQGRLPRIPQVLSQEFTELLKVMI 262
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV--SSLLGA 233
I LEYLH S +++ DIK N++LD+D KI+DFGL KEGI +++
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATMKXF 165
Query: 234 RGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G Y+APEV N + D + G+++ E++
Sbjct: 166 CGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 199
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV--SSLLGA 233
I LEYLH S +++ DIK N++LD+D KI+DFGL KEGI +++
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATMKXF 165
Query: 234 RGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G Y+APEV N + D + G+++ E++
Sbjct: 166 CGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 199
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 67/159 (42%), Gaps = 44/159 (27%)
Query: 90 KLGQGGFGGVYKGRLLDDFVNEVASISRT-----------------------SHVNVVTL 126
KLG+G +G VYK +D NE +I R H N++ L
Sbjct: 41 KLGEGTYGEVYKA--IDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIEL 98
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEK--MYEIVIGIAKGLEYLH 184
+ LI+E+ N + N D S +R K +Y+++ G+ + H
Sbjct: 99 KSVIHHNHRLHLIFEYAENDLKKYMDKNPDVS-----MRVIKSFLYQLI----NGVNFCH 149
Query: 185 HGCSTKILHFDIKPHNILL---DEDFCP--KISDFGLAK 218
S + LH D+KP N+LL D P KI DFGLA+
Sbjct: 150 ---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 65/272 (23%)
Query: 89 DKLGQGGFGGVYK--GRL-------------LDDFVNEVASISRT-------SHVNVVTL 126
+K+G G FG V+K RL L V+E ++ H +VV
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
E ++ + E+ GSL + + + Y + ++ ++++ + +GL Y+H
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVGRGLRYIH-- 130
Query: 187 CSTKILHFDIKPHNILLDEDFCP-------------------KISDFGLAKLCTTKEGIV 227
S ++H DIKP NI + P KI D G T+ +
Sbjct: 131 -SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG----HVTR---I 182
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYF 287
SS G ++A EV N+ + K+D+++ + ++ G + +G
Sbjct: 183 SSPQVEEGDSRFLANEVLQENYTHLP-KADIFALALTVVCAAGAEPLPRNGDQ------- 234
Query: 288 PHWIYRHVEQDREFKLPGVVTRKENEIAKKMI 319
+ + Q R ++P V++++ E+ K MI
Sbjct: 235 ----WHEIRQGRLPRIPQVLSQEFTELLKVMI 262
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 24/193 (12%)
Query: 87 FKDKLGQGGFGGVY--KGRLLDDFVN-EVASISRTSHVNVVTLLGFCLEGNNRALIYEFM 143
+DKL + Y +G +D+ V E+ + H N+V L + A+I E+
Sbjct: 39 MRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98
Query: 144 PNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNIL 202
G L E+ G S+ ++++ G+ Y H S +I H D+K N L
Sbjct: 99 SGGELYERICNAGRFSEDEARFFFQQLL-------SGVSYCH---SMQICHRDLKLENTL 148
Query: 203 LDEDFCP--KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHK-SDVY 259
LD P KI DFG +K S++ G YIAPEV R E K +DV+
Sbjct: 149 LDGSPAPRLKICDFGYSKSSVLHSQPKSTV----GTPAYIAPEVLLRQ--EYDGKIADVW 202
Query: 260 SFGMMI-MELVGC 271
S G+ + + LVG
Sbjct: 203 SCGVTLYVMLVGA 215
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 127 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 184
L F + N N ++ E+MP G + + G S+P + Y I + EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 158
Query: 185 HGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE- 243
S +++ D+KP N+L+D+ K++DFG AK + + G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC------GTPEYLAPEI 209
Query: 244 VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+ S+ + + D ++ G++I E+
Sbjct: 210 ILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 37/210 (17%)
Query: 90 KLGQGGFGGVYKGRLLDD-------FVNEVASISRTS---------HVNVVTLLGFCLEG 133
++G+G +G V+ G+ + F E AS R + H N++ + ++G
Sbjct: 44 QIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKG 103
Query: 134 NNRA----LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGC-S 188
LI ++ NGSL ++ + L + M ++ GL +LH S
Sbjct: 104 TGSWTQLYLITDYHENGSLYDYLKSTT-------LDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 189 TK----ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR-GIIGYIAPE 243
T+ I H D+K NIL+ ++ I+D GLA + V R G Y+ PE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE 216
Query: 244 V----FSRNFGEVSHKSDVYSFGMMIMELV 269
V +RN + +D+YSFG+++ E+
Sbjct: 217 VLDESLNRNHFQSYIMADMYSFGLILWEVA 246
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 108 FVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWE 167
+ EV + + H N+ L F + L+ E G L + + R
Sbjct: 73 LLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-- 130
Query: 168 KMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLD---EDFCPKISDFGLAKLCTTKE 224
I+ + G+ Y H KI+H D+KP N+LL+ +D +I DFGL+ +
Sbjct: 131 ----IIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183
Query: 225 GIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMI-MELVGC 271
+ G YIAPEV + E K DV+S G+++ + L GC
Sbjct: 184 KXKDKI----GTAYYIAPEVLHGTYDE---KCDVWSTGVILYILLSGC 224
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 127 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 184
L F + N N ++ E+MP G + + G S+P + Y I + EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 158
Query: 185 HGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE- 243
S +++ D+KP N+L+D+ K++DFG AK + + G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC------GTPEYLAPEI 209
Query: 244 VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+ S+ + + D ++ G++I E+
Sbjct: 210 ILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 143 MPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNIL 202
+ + SL+KF Y K Q + + + +I + I K LE+LH S ++H D+KP N+L
Sbjct: 114 LXDTSLDKF-YKQVIDK-GQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVL 169
Query: 203 LDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGE--VSHKSDVYS 260
++ K DFG++ V+ + A G Y APE + + S KSD++S
Sbjct: 170 INALGQVKXCDFGISGYLVDD---VAKDIDA-GCKPYXAPERINPELNQKGYSVKSDIWS 225
Query: 261 FGMMIMELVGCKNNLDS 277
G+ +EL + DS
Sbjct: 226 LGITXIELAILRFPYDS 242
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 65/272 (23%)
Query: 89 DKLGQGGFGGVYK--GRL-------------LDDFVNEVASISRT-------SHVNVVTL 126
+K+G G FG V+K RL L V+E ++ H +VV
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76
Query: 127 LGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHG 186
E ++ + E+ GSL + + + Y + ++ ++++ + +GL Y+H
Sbjct: 77 FSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVGRGLRYIH-- 132
Query: 187 CSTKILHFDIKPHNILLDEDFCP-------------------KISDFGLAKLCTTKEGIV 227
S ++H DIKP NI + P KI D G T+ +
Sbjct: 133 -SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG----HVTR---I 184
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYF 287
SS G ++A EV N+ + K+D+++ + ++ G + +G
Sbjct: 185 SSPQVEEGDSRFLANEVLQENYTHLP-KADIFALALTVVCAAGAEPLPRNGDQ------- 236
Query: 288 PHWIYRHVEQDREFKLPGVVTRKENEIAKKMI 319
+ + Q R ++P V++++ E+ K MI
Sbjct: 237 ----WHEIRQGRLPRIPQVLSQEFTELLKVMI 264
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 35/197 (17%)
Query: 89 DKLGQGGFGGVYK-------GRLLDDFV------------NEVASISRTSHVNVVTLLGF 129
++LG G FG V++ FV E+ ++S H +V L
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 130 CLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCST 189
+ N +IYEFM G L + V + + ++ E + + KGL ++H
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKVADEHNK-----MSEDEAVEYMRQVCKGLCHMH---EN 168
Query: 190 KILHFDIKPHNILLDEDFCP--KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSR 247
+H D+KP NI+ K+ DFGL K+ + + G + APEV
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT----GTAEFAAPEVAEG 224
Query: 248 NFGEVSHKSDVYSFGMM 264
V + +D++S G++
Sbjct: 225 K--PVGYYTDMWSVGVL 239
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 35/197 (17%)
Query: 89 DKLGQGGFGGVYK-------GRLLDDFV------------NEVASISRTSHVNVVTLLGF 129
++LG G FG V++ FV E+ ++S H +V L
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 130 CLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCST 189
+ N +IYEFM G L + V + + ++ E + + KGL ++H
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHNK-----MSEDEAVEYMRQVCKGLCHMH---EN 274
Query: 190 KILHFDIKPHNILLDEDFCP--KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSR 247
+H D+KP NI+ K+ DFGL K+ + + G + APEV
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT----GTAEFAAPEVAEG 330
Query: 248 NFGEVSHKSDVYSFGMM 264
V + +D++S G++
Sbjct: 331 K--PVGYYTDMWSVGVL 345
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEK 168
E+ + + +H ++ + F + + ++ E M G L +K V N + L +
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 245
Query: 169 MYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILL---DEDFCPKISDFGLAKLCTTKEG 225
Y++++ + +YLH I+H D+KP N+LL +ED KI+DFG +K+ G
Sbjct: 246 -YQMLLAV----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----G 293
Query: 226 IVSSLLGARGIIGYIAPEVF-SRNFGEVSHKSDVYSFGMMIM 266
S + G Y+APEV S + D +S G+++
Sbjct: 294 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEK 168
E+ + + +H ++ + F + + ++ E M G L +K V N + L +
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-- 259
Query: 169 MYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILL---DEDFCPKISDFGLAKLCTTKEG 225
Y++++ + +YLH I+H D+KP N+LL +ED KI+DFG +K+ G
Sbjct: 260 -YQMLLAV----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----G 307
Query: 226 IVSSLLGARGIIGYIAPEVF-SRNFGEVSHKSDVYSFGMMIM 266
S + G Y+APEV S + D +S G+++
Sbjct: 308 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 349
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 14/97 (14%)
Query: 172 IVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP----KISDFGLAKLCTTKEGIV 227
++ I +G+ YLH I+H D+KP NILL + P KI DFG+++ K G
Sbjct: 136 LIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIY-PLGDIKIVDFGMSR----KIGHA 187
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMM 264
L G Y+APE+ N+ ++ +D+++ G++
Sbjct: 188 CELREIMGTPEYLAPEIL--NYDPITTATDMWNIGII 222
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 50/210 (23%)
Query: 91 LGQGGFGGVYK---------GRLLDDFVNEVASISRTS-----------------HVNVV 124
LG+GG+G V++ G++ V + A I R + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 125 TLLGFCLEGNNRALIYEFMPNGSL-----EKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
L+ G LI E++ G L + ++ DT+ C YL I+
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTA--CFYL---------AEISMA 133
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
L +LH I++ D+KP NI+L+ K++DFGL K + +G V+ G I Y
Sbjct: 134 LGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHTFC--GTIEY 187
Query: 240 IAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+APE+ R+ + D +S G ++ +++
Sbjct: 188 MAPEILMRSGH--NRAVDWWSLGALMYDML 215
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 16/166 (9%)
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQY 163
L EV + +H N+V L LI E+ G + + V +G +
Sbjct: 55 LQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR 114
Query: 164 LRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTK 223
++ + I ++Y H +I+H D+K N+LLD D KI+DFG + T
Sbjct: 115 SKFRQ-------IVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 164
Query: 224 EGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G + + G+ Y APE+F + + DV+S G+++ LV
Sbjct: 165 -GKLDTFCGSP---PYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 205
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 50/210 (23%)
Query: 91 LGQGGFGGVYK---------GRLLDDFVNEVASISRTS-----------------HVNVV 124
LG+GG+G V++ G++ V + A I R + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 125 TLLGFCLEGNNRALIYEFMPNGSL-----EKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
L+ G LI E++ G L + ++ DT+ C YL I+
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTA--CFYL---------AEISMA 133
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
L +LH I++ D+KP NI+L+ K++DFGL K + +G V+ G I Y
Sbjct: 134 LGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHXFC--GTIEY 187
Query: 240 IAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+APE+ R+ + D +S G ++ +++
Sbjct: 188 MAPEILMRSGH--NRAVDWWSLGALMYDML 215
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 15/105 (14%)
Query: 171 EIVIGIAKGLEYLH--HGCSTKILHFDIKPHNILLDEDFCPKISDFGLA-KLCTTKEGIV 227
++ + I K L YL HG ++H D+KP NILLDE K+ DFG++ +L K
Sbjct: 128 KMTVAIVKALYYLKEKHG----VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDR 183
Query: 228 SSLLGARGIIGYIAPEVF---SRNFGEVSHKSDVYSFGMMIMELV 269
S+ G Y+APE + ++DV+S G+ ++EL
Sbjct: 184 SA-----GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELA 223
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 40/205 (19%)
Query: 90 KLGQGGFGGVYKGRLLDD---------------------FVNEVASISRTSHVNVVTLLG 128
K+G+G +G V+K R D + E+ + + H N+V LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 129 FCLEGNNRALIYEFMPNGSLEKF--VYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLH-H 185
L++E+ + L + G + + W+ + + + + H H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTL--------QAVNFCHKH 121
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVF 245
C +H D+KP NIL+ + K+ DFG A+L T + R Y +PE+
Sbjct: 122 NC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR---WYRSPELL 174
Query: 246 SRNFGEVSHKSDVYSFGMMIMELVG 270
+ + DV++ G + EL+
Sbjct: 175 VGD-TQYGPPVDVWAIGCVFAELLS 198
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 25/192 (13%)
Query: 88 KDKLGQGGFG------GVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYE 141
KD++ Q + K + + EV + + H N++ L + ++ ++ E
Sbjct: 42 KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101
Query: 142 FMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNI 201
G L + R I+ + G+ Y+H I+H D+KP NI
Sbjct: 102 LYTGGELFDEIIKRKRFSEHDAAR------IIKQVFSGITYMH---KHNIVHRDLKPENI 152
Query: 202 LL---DEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDV 258
LL ++D KI DFGL+ C + + +G YIAPEV + E K DV
Sbjct: 153 LLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRIGT---AYYIAPEVLRGTYDE---KCDV 205
Query: 259 YSFGMMIMELVG 270
+S G+++ L+
Sbjct: 206 WSAGVILYILLS 217
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 25/192 (13%)
Query: 88 KDKLGQGGFG------GVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYE 141
KD++ Q + K + + EV + + H N++ L + ++ ++ E
Sbjct: 42 KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101
Query: 142 FMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNI 201
G L + R I+ + G+ Y+H I+H D+KP NI
Sbjct: 102 LYTGGELFDEIIKRKRFSEHDAAR------IIKQVFSGITYMH---KHNIVHRDLKPENI 152
Query: 202 LL---DEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDV 258
LL ++D KI DFGL+ C + + +G YIAPEV + E K DV
Sbjct: 153 LLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRIGT---AYYIAPEVLRGTYDE---KCDV 205
Query: 259 YSFGMMIMELVG 270
+S G+++ L+
Sbjct: 206 WSAGVILYILLS 217
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNV--VTLL 127
LG G FG V Y ++LD +V + + H VN +T L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E+ P G + + G S+P + Y I + EYLH
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH- 159
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+++D+ K++DFG AK + + G Y+APE +
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 211
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 212 LSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNV--VTLL 127
LG G FG V Y ++LD +V + + H VN +T L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E+ P G + + G S+P + Y I + EYLH
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH- 159
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+++D+ K++DFG AK + + G Y+APE +
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 211
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 212 LSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIG 238
L+Y H S I+H D+KPHN+L+D + ++ D+GLA+ + + + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKG 199
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
PE+ ++ + D++S G M+ ++ K G D+ ++
Sbjct: 200 ---PELLV-DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 44/211 (20%)
Query: 90 KLGQGGFGGVYKGR-------------LLDD--------FVNEVASISRTSHVNVVTLLG 128
K+GQG FG V+K R L+++ + E+ + H NVV L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 129 FCLEGN---NRA-----LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGL 180
C NR L+++F + G S ++ ++ + GL
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHD------LAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 181 EYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI-IGY 239
Y+H KILH D+K N+L+ D K++DFGLA+ + + + R + + Y
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 240 IAPEVF--SRNFGEVSHKSDVYSFGMMIMEL 268
PE+ R++G D++ G ++ E+
Sbjct: 196 RPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 99 VYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGN-NRALIYEFMPNGSLEKFVYN-GD 156
V K + ++ +NE I + + + L F + N N ++ E+ P G + + G
Sbjct: 80 VVKLKQIEHTLNE-KRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGR 138
Query: 157 TSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGL 216
S+P + Y I + EYLH S +++ D+KP N+L+D+ K++DFG
Sbjct: 139 FSEPHA-----RFYAAQIVLT--FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGF 188
Query: 217 AKLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
AK + + G Y+APE + S+ + + D ++ G++I E+
Sbjct: 189 AKRVKGRTWXLC------GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 25/187 (13%)
Query: 88 KDKLGQGGFG------GVYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYE 141
KD++ Q + K + + EV + + H N++ L + ++ ++ E
Sbjct: 42 KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101
Query: 142 FMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNI 201
G L + R I+ + G+ Y+H I+H D+KP NI
Sbjct: 102 LYTGGELFDEIIKRKRFSEHDAAR------IIKQVFSGITYMHKH---NIVHRDLKPENI 152
Query: 202 LL---DEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDV 258
LL ++D KI DFGL+ C + + +G YIAPEV + E K DV
Sbjct: 153 LLESKEKDCDIKIIDFGLST-CFQQNTKMKDRIGT---AYYIAPEVLRGTYDE---KCDV 205
Query: 259 YSFGMMI 265
+S G+++
Sbjct: 206 WSAGVIL 212
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 44/211 (20%)
Query: 90 KLGQGGFGGVYKGR-------------LLDD--------FVNEVASISRTSHVNVVTLLG 128
K+GQG FG V+K R L+++ + E+ + H NVV L+
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 129 FCLEGN---NRA-----LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGL 180
C NR L+++F + G S ++ ++ + GL
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHD------LAGLLSNVLVKFTLSEIKRVMQMLLNGL 137
Query: 181 EYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI-IGY 239
Y+H KILH D+K N+L+ D K++DFGLA+ + + + R + + Y
Sbjct: 138 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 240 IAPEVF--SRNFGEVSHKSDVYSFGMMIMEL 268
PE+ R++G D++ G ++ E+
Sbjct: 195 RPPELLLGERDYGP---PIDLWGAGCIMAEM 222
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 82/210 (39%), Gaps = 44/210 (20%)
Query: 87 FKDKLGQGGFGGVYKGRL--------------------LDDFVNEVASISRTSHVNVVTL 126
D LGQG V++GR +D + E + + +H N+V L
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 127 LGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI-GIAKGLEYL 183
E R LI EF P GSL Y Y E + IV+ + G+ +L
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSL----YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 184 HHGCSTKILHFDIKPHNILL----DEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
I+H +IKP NI+ D K++DFG A+ E VS G Y
Sbjct: 129 R---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS----LYGTEEY 181
Query: 240 IAPEVFSRNFGEVSHKS------DVYSFGM 263
+ P+++ R H+ D++S G+
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGV 211
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 44/211 (20%)
Query: 90 KLGQGGFGGVYKGR-------------LLDD--------FVNEVASISRTSHVNVVTLLG 128
K+GQG FG V+K R L+++ + E+ + H NVV L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 129 FCLEGN---NRA-----LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGL 180
C NR L+++F + G S ++ ++ + GL
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHD------LAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 181 EYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI-IGY 239
Y+H KILH D+K N+L+ D K++DFGLA+ + + + R + + Y
Sbjct: 139 YYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 240 IAPEVF--SRNFGEVSHKSDVYSFGMMIMEL 268
PE+ R++G D++ G ++ E+
Sbjct: 196 RPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 89 DKLGQGGFGGVYKGR--------------------LLDDFVNEVASISRTSHVNVVTLLG 128
+K+G+G +G VYK + + + E++ + H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQY-LRWEKMYEIVIGIAKGLEYLHHGC 187
L++E + + L+K + C+ L ++ + G+ Y H
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLL------DVCEGGLESVTAKSFLLQLLNGIAYCH--- 117
Query: 188 STKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI-VSSLLGARGIIGYIAPEVFS 246
++LH D+KP N+L++ + KI+DFGLA+ GI V + Y AP+V
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAF----GIPVRKYTHEVVTLWYRAPDVLM 173
Query: 247 RNFGEVSHKSDVYSFGMMIMELV 269
+ + S D++S G + E+V
Sbjct: 174 GS-KKYSTTIDIWSVGCIFAEMV 195
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIG 238
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKG 199
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
PE+ ++ + D++S G M+ ++ K G D+ ++
Sbjct: 200 ---PELLV-DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 45/228 (19%)
Query: 68 GPLPLKRYNFSDVKKLTNSFKDKLGQGGFGG-----------------VYKGRLLDDFVN 110
GP+ L + SD +L +G G FG + +G +D+ V
Sbjct: 8 GPMDLPIMHDSDRYELVKD----IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVK 63
Query: 111 -EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEK 168
E+ + H N+V L + A++ E+ G L E+ G S+ +++
Sbjct: 64 REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ 123
Query: 169 MYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP--KISDFGLAKLCTTKEGI 226
+ G+ Y H + ++ H D+K N LLD P KI+DFG +K +
Sbjct: 124 LI-------SGVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASV----L 169
Query: 227 VSSLLGARGIIGYIAPEVFSRNF--GEVSHKSDVYSFGMMI-MELVGC 271
S A G YIAPEV + G+V +DV+S G+ + + LVG
Sbjct: 170 HSQPKSAVGTPAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVGA 214
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIG 238
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKG 199
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
PE+ ++ + D++S G M+ ++ K G D+ ++
Sbjct: 200 ---PELLV-DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIG 238
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKG 199
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
PE+ ++ + D++S G M+ ++ K G D+ ++
Sbjct: 200 ---PELLV-DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 84/212 (39%), Gaps = 29/212 (13%)
Query: 72 LKRYNFSDVKKLTNSFKDKLGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH 120
K+ NF + KL + +L +G + G + R DF E + SH
Sbjct: 9 FKQLNF--LTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 121 VNVVTLLGFCLE--GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAK 178
NV+ +LG C + LI + P GSL ++ G Q + + + A+
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQ----SQAVKFALDXAR 122
Query: 179 GLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIG 238
G +L H I + ++ +DED +IS K S G
Sbjct: 123 GXAFL-HTLEPLIPRHALNSRSVXIDEDXTARIS------XADVKFSFQSP--GRXYAPA 173
Query: 239 YIAPEVFSRNFGEVSHKS-DVYSFGMMIMELV 269
++APE + + + +S D +SF +++ ELV
Sbjct: 174 WVAPEALQKKPEDTNRRSADXWSFAVLLWELV 205
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 127 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 184
L F + N N ++ E+ P G + + G S+P + Y I + EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 158
Query: 185 HGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE- 243
S +++ D+KP N+++D+ K++DFGLAK + + G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC------GTPEYLAPEI 209
Query: 244 VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+ S+ + + D ++ G++I E+
Sbjct: 210 ILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 44/211 (20%)
Query: 90 KLGQGGFGGVYKGR-------------LLDD--------FVNEVASISRTSHVNVVTLLG 128
K+GQG FG V+K R L+++ + E+ + H NVV L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 129 FCLEGN---NRA-----LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGL 180
C NR L+++F + G S ++ ++ + GL
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHD------LAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 181 EYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGI-IGY 239
Y+H KILH D+K N+L+ D K++DFGLA+ + + + R + + Y
Sbjct: 139 YYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 240 IAPEVF--SRNFGEVSHKSDVYSFGMMIMEL 268
PE+ R++G D++ G ++ E+
Sbjct: 196 RPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIG 238
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKG 199
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
PE+ ++ + D++S G M+ ++ K G D+ ++
Sbjct: 200 ---PELLV-DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 89 DKLGQGGFGGVYKGR--------------------LLDDFVNEVASISRTSHVNVVTLLG 128
+K+G+G +G VYK + + + E++ + H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQY-LRWEKMYEIVIGIAKGLEYLHHGC 187
L++E + + L+K + C+ L ++ + G+ Y H
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLL------DVCEGGLESVTAKSFLLQLLNGIAYCH--- 117
Query: 188 STKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI-VSSLLGARGIIGYIAPEVFS 246
++LH D+KP N+L++ + KI+DFGLA+ GI V + Y AP+V
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAF----GIPVRKYTHEVVTLWYRAPDVLM 173
Query: 247 RNFGEVSHKSDVYSFGMMIMELV 269
+ + S D++S G + E+V
Sbjct: 174 GS-KKYSTTIDIWSVGCIFAEMV 195
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIG 238
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKG 199
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
PE+ ++ + D++S G M+ ++ K G D+ ++
Sbjct: 200 ---PELLV-DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 142
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIG 238
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + + +R G
Sbjct: 143 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKG 198
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
PE+ ++ + D++S G M+ ++ K G D+ ++
Sbjct: 199 ---PELLV-DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 241
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIG 238
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKG 199
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
PE+ ++ + D++S G M+ ++ K G D+ ++
Sbjct: 200 ---PELLV-DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 91 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 141
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIG 238
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + + +R G
Sbjct: 142 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKG 197
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
PE+ ++ + D++S G M+ ++ K G D+ ++
Sbjct: 198 ---PELLV-DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 240
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 124 VTLLGFCLEG-NNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 182
+T L + + NN L+ ++ G L + + P + R+ + E+VI I +
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARF-YLAEMVIAI-DSVHQ 193
Query: 183 LHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAP 242
LH+ +H DIKP NIL+D + +++DFG + L ++G V S + A G YI+P
Sbjct: 194 LHY------VHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSV-AVGTPDYISP 245
Query: 243 EVFSR---NFGEVSHKSDVYSFGMMIMELV 269
E+ G + D +S G+ + E++
Sbjct: 246 EILQAMEGGKGRYGPECDWWSLGVCMYEML 275
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 127 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 184
L F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 158
Query: 185 HGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE- 243
S +++ D+KP N+L+D+ K++DFG AK + + G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC------GTPEYLAPEI 209
Query: 244 VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+ S+ + + D ++ G++I E+
Sbjct: 210 ILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIG 238
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKG 199
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
PE+ ++ + D++S G M+ ++ K G D+ ++
Sbjct: 200 ---PELLV-DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIG 238
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKG 199
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
PE+ ++ + D++S G M+ ++ K G D+ ++
Sbjct: 200 ---PELLV-DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 143
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIG 238
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKG 199
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
PE+ ++ + D++S G M+ ++ K G D+ ++
Sbjct: 200 ---PELLV-DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 142
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIG 238
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + + +R G
Sbjct: 143 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKG 198
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
PE+ ++ + D++S G M+ ++ K G D+ ++
Sbjct: 199 ---PELLV-DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 241
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 89 DKLGQGGFGGVYKGR--------------------LLDDFVNEVASISRTSHVNVVTLLG 128
+K+G+G +G VYK + + + E++ + H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQY-LRWEKMYEIVIGIAKGLEYLHHGC 187
L++E + + L+K + C+ L ++ + G+ Y H
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLL------DVCEGGLESVTAKSFLLQLLNGIAYCH--- 117
Query: 188 STKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGI-VSSLLGARGIIGYIAPEVFS 246
++LH D+KP N+L++ + KI+DFGLA+ GI V + Y AP+V
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAF----GIPVRKYTHEIVTLWYRAPDVLM 173
Query: 247 RNFGEVSHKSDVYSFGMMIMELV 269
+ + S D++S G + E+V
Sbjct: 174 GS-KKYSTTIDIWSVGCIFAEMV 195
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 92
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 93 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH- 144
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+L+D+ +++DFG AK + + G Y+APE +
Sbjct: 145 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC------GTPEYLAPEII 196
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 197 LSKGYNKA---VDWWALGVLIYEMAA 219
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N++TL + +R AL++E + N ++ +Y T ++ MYEI+ K
Sbjct: 98 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFY----MYEIL----KA 148
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIG 238
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + + +R G
Sbjct: 149 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKG 204
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
PE+ ++ + D++S G M+ ++ K G D+ ++
Sbjct: 205 ---PELLV-DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 247
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH- 159
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+L+D+ +++DFG AK + + G Y+APE +
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC------GTPEYLAPEII 211
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 212 LSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH- 159
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+L+D+ +++DFG AK + + G Y+APE +
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 211
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 212 LSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 37/209 (17%)
Query: 91 LGQGGFGGVYKGRLLDDFV----------------NEVASISRTSHVNVVTLLGFCLEGN 134
+G+G +G V++G + V E+ + H N++ + +
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSR 75
Query: 135 NRA----LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLH---HGC 187
N + LI + +GSL F+ T +P LR + + A GL +LH G
Sbjct: 76 NSSTQLWLITHYHEHGSLYDFLQR-QTLEPHLALR------LAVSAACGLAHLHVEIFGT 128
Query: 188 STK--ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR-GIIGYIAPEV 244
K I H D K N+L+ + I+D GLA + + + R G Y+APEV
Sbjct: 129 QGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEV 188
Query: 245 FSRNFG----EVSHKSDVYSFGMMIMELV 269
E +D+++FG+++ E+
Sbjct: 189 LDEQIRTDCFESYKWTDIWAFGLVLWEIA 217
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH- 159
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+L+D+ +++DFG AK + + G Y+APE +
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 211
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 212 LSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 99
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH- 151
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+L+D+ +++DFG AK + + G Y+APE +
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 203
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 204 LSKGYNKA---VDWWALGVLIYEMAA 226
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV--SSLLGA 233
I L+YLH +++ D+K N++LD+D KI+DFGL KEGI +++
Sbjct: 257 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLC-----KEGIKDGATMKTF 309
Query: 234 RGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G Y+APEV N + D + G+++ E++
Sbjct: 310 CGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 343
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH- 158
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+L+D+ +++DFG AK + + G Y+APE +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 210
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 211 LSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH- 159
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+L+D+ +++DFG AK + + G Y+APE +
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 211
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 212 LSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH- 159
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+L+D+ +++DFG AK + + G Y+APE +
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 211
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 212 LSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 193 HFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEV 252
H D+KP NIL+ D + DFG+A T ++ ++ L G + Y APE FS +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEK--LTQLGNTVGTLYYXAPERFSES--HA 212
Query: 253 SHKSDVYSFGMMIME 267
++++D+Y+ ++ E
Sbjct: 213 TYRADIYALTCVLYE 227
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV--SSLLGA 233
I L+YLH +++ D+K N++LD+D KI+DFGL KEGI +++
Sbjct: 260 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLC-----KEGIKDGATMKTF 312
Query: 234 RGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G Y+APEV N + D + G+++ E++
Sbjct: 313 CGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 346
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E+ P G + + G S+P + Y I + EYLH
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH- 159
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+++D+ K++DFG AK + + G Y+APE +
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 211
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 212 LSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH- 158
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+L+D+ +++DFG AK + + G Y+APE +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 210
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 211 LSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH- 158
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+L+D+ +++DFG AK + + G Y+APE +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 210
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 211 LSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 22/168 (13%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 138
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTT-KEGIVSSLLGARGII 237
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ KE V + +R
Sbjct: 139 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR--VASRYFK 193
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
G PE+ + + + D++S G M ++ K G D+ ++
Sbjct: 194 G---PELLV-DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 237
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 22/168 (13%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 137
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTT-KEGIVSSLLGARGII 237
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ KE V + +R
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR--VASRYFK 192
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
G PE+ + + + D++S G M ++ K G D+ ++
Sbjct: 193 G---PELLV-DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 22/168 (13%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 137
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTT-KEGIVSSLLGARGII 237
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ KE V + +R
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR--VASRYFK 192
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
G PE+ + + + D++S G M ++ K G D+ ++
Sbjct: 193 G---PELLV-DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E+ P G + + G S+P + Y I + EYLH
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH- 158
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+++D+ K++DFG AK + + G Y+APE +
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 210
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 211 LSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 22/168 (13%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 137
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTT-KEGIVSSLLGARGII 237
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ KE V + +R
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR--VASRYFK 192
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
G PE+ + + + D++S G M ++ K G D+ ++
Sbjct: 193 G---PELLV-DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 22/168 (13%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 158
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTT-KEGIVSSLLGARGII 237
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ KE V + +R
Sbjct: 159 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR--VASRYFK 213
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
G PE+ + + + D++S G M ++ K G D+ ++
Sbjct: 214 G---PELLV-DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 257
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 22/168 (13%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 137
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTT-KEGIVSSLLGARGII 237
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ KE V + +R
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR--VASRYFK 192
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
G PE+ + + + D++S G M ++ K G D+ ++
Sbjct: 193 G---PELLV-DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 22/168 (13%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 138
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTT-KEGIVSSLLGARGII 237
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ KE V + +R
Sbjct: 139 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR--VASRYFK 193
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
G PE+ + + + D++S G M ++ K G D+ ++
Sbjct: 194 G---PELLV-DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 237
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNV--VTLL 127
LG G FG V Y ++LD +V + + H VN +T L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E+ P G + + G +P + Y I + EYLH
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHA-----RFYAAQIVLT--FEYLH- 159
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+++D+ K++DFG AK + + G Y+APE +
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 211
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 212 LSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E++P G + + G S+P + Y I + EYLH
Sbjct: 128 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH- 179
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+L+D+ +++DFG AK + + G Y+APE +
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 231
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 232 LSKGYNKA---VDWWALGVLIYEMAA 254
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 22/168 (13%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 137
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTT-KEGIVSSLLGARGII 237
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ KE V + +R
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR--VASRYFK 192
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
G PE+ + + + D++S G M ++ K G D+ ++
Sbjct: 193 G---PELLV-DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 80/209 (38%), Gaps = 51/209 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + E+ S H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNG---DTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
+ + L+ EF P G L K + D + ++ +A L Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---------ELADALHYCH- 131
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR---GIIGYIAP 242
K++H DIKP N+L+ KI+DFG + + + L R G + Y+ P
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFGWS--------VHAPSLRRRXMCGTLDYLPP 181
Query: 243 EVFSRNFGEVSHKSDVYSFGMMIME-LVG 270
E+ + K D++ G++ E LVG
Sbjct: 182 EMIEGKTHD--EKVDLWCAGVLCYEFLVG 208
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 22/171 (12%)
Query: 109 VNEVASISRTSHVNVVTLLGF----CLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL 164
+ E+ + H N++T+ E N I + + L + + Q L
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-------STQML 109
Query: 165 RWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKE 224
+ + + + ++ LH + ++H D+KP N+L++ + K+ DFGLA++
Sbjct: 110 SDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 225 GIVSSLLGAR-GIIGYI------APEVFSRNFGEVSHKSDVYSFGMMIMEL 268
S G + G+ Y+ APEV + + S DV+S G ++ EL
Sbjct: 167 ADNSEPTGQQSGMTEYVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 22/168 (13%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 139
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTT-KEGIVSSLLGARGII 237
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ KE V + +R
Sbjct: 140 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR--VASRYFK 194
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
G PE+ + + + D++S G M ++ K G D+ ++
Sbjct: 195 G---PELLV-DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 238
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 80/209 (38%), Gaps = 51/209 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + E+ S H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNG---DTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
+ + L+ EF P G L K + D + ++ +A L Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---------ELADALHYCH- 131
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR---GIIGYIAP 242
K++H DIKP N+L+ KI+DFG + + + L R G + Y+ P
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFGWS--------VHAPSLRRRXMCGTLDYLPP 181
Query: 243 EVFSRNFGEVSHKSDVYSFGMMIME-LVG 270
E+ + K D++ G++ E LVG
Sbjct: 182 EMIEGKTHD--EKVDLWCAGVLCYEFLVG 208
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 22/171 (12%)
Query: 109 VNEVASISRTSHVNVVTLLGF----CLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL 164
+ E+ + H N++T+ E N I + + L + + Q L
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-------STQML 109
Query: 165 RWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKE 224
+ + + + ++ LH + ++H D+KP N+L++ + K+ DFGLA++
Sbjct: 110 SDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 225 GIVSSLLGAR-GIIGYI------APEVFSRNFGEVSHKSDVYSFGMMIMEL 268
S G + G++ ++ APEV + + S DV+S G ++ EL
Sbjct: 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 22/168 (13%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N+V LL + +++ +LI+E++ N K +Y T +Y +YE++ K
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYY----IYELL----KA 137
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTT-KEGIVSSLLGARGII 237
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ KE V + +R
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR--VASRYFK 192
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
G PE+ + + + D++S G M ++ K G D+ ++
Sbjct: 193 G---PELLV-DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 236
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 27/138 (19%)
Query: 120 HVNVVTLLGFCLEGNNRALIYEFMPNGSL------EKFVYNGDTSKPCQYLRWEKMYEIV 173
H N+V L E + LI++ + G L ++ D S Q +
Sbjct: 80 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI--------- 130
Query: 174 IGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDF---CPKISDFGLAKLCTTKEGIVSSL 230
LE + H ++H D+KP N+LL K++DFGLA EG +
Sbjct: 131 ------LEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQAW 181
Query: 231 LGARGIIGYIAPEVFSRN 248
G G GY++PEV ++
Sbjct: 182 FGFAGTPGYLSPEVLRKD 199
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 80/209 (38%), Gaps = 51/209 (24%)
Query: 91 LGQGGFGGVYKGR----------------------LLDDFVNEVASISRTSHVNVVTLLG 128
LG+G FG VY R + E+ S H N++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 129 FCLEGNNRALIYEFMPNGSLEKFVYNG---DTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
+ + L+ EF P G L K + D + ++ +A L Y H
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---------ELADALHYCH- 132
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR---GIIGYIAP 242
K++H DIKP N+L+ KI+DFG + + + L R G + Y+ P
Sbjct: 133 --ERKVIHRDIKPENLLMGYKGELKIADFGWS--------VHAPSLRRRXMCGTLDYLPP 182
Query: 243 EVFSRNFGEVSHKSDVYSFGMMIME-LVG 270
E+ + K D++ G++ E LVG
Sbjct: 183 EMIEGKTHD--EKVDLWCAGVLCYEFLVG 209
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 127 LGFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLH 184
L F + N N ++ E+ P G + + G S+P + Y I + EYLH
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH 158
Query: 185 HGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE- 243
S +++ D+KP N+++D+ +++DFGLAK + + G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC------GTPEYLAPEI 209
Query: 244 VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+ S+ + + D ++ G++I E+
Sbjct: 210 ILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 24/177 (13%)
Query: 100 YKGRLLDD---FVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGD 156
+ G LLD F+++ S + + V T + C E N A+ NGS+ F + D
Sbjct: 111 HGGHLLDKLNVFIDD--STGKCAMDVVKTQICPCPECNEEAI------NGSIHGFRESLD 162
Query: 157 TSKPCQYLRWEKMY-EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILL--DEDFCPKISD 213
+++ EK+ I+ I L YLH + I H DIKP N L ++ F K+ D
Sbjct: 163 ------FVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVD 213
Query: 214 FGLAK-LCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
FGL+K G + G ++APEV + K D +S G+++ L+
Sbjct: 214 FGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLL 270
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 99 VYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN-GDT 157
V K + ++ +NE + + +V L + +N ++ E++P G + + G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF 138
Query: 158 SKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLA 217
S+P + Y I + EYLH S +++ D+KP N+L+D+ +++DFG A
Sbjct: 139 SEPHA-----RFYAAQIVLT--FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 218 KLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
K + + G Y+APE + S+ + + D ++ G++I E+
Sbjct: 189 KRVKGRTWXLC------GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 34/180 (18%)
Query: 106 DDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL---------EKFVYNGD 156
+D E + H ++V LL +++EFM L FVY+
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 157 TSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILL--DEDFCP-KISD 213
+ Y+R I + L Y H I+H D+KP N+LL E+ P K+ D
Sbjct: 131 VAS--HYMRQ---------ILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGD 176
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRN-FGEVSHKSDVYSFGMMIMELV-GC 271
FG+A + + G+V+ G G ++APEV R +G+ DV+ G+++ L+ GC
Sbjct: 177 FGVA-IQLGESGLVAG--GRVGTPHFMAPEVVKREPYGK---PVDVWGCGVILFILLSGC 230
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 99 VYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN-GDT 157
V K + ++ +NE + + +V L + +N ++ E++P G + + G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF 138
Query: 158 SKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLA 217
S+P + Y I + EYLH S +++ D+KP N+L+D+ +++DFG A
Sbjct: 139 SEPHA-----RFYAAQIVLT--FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 218 KLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
K + + G Y+APE + S+ + + D ++ G++I E+
Sbjct: 189 KRVKGRTWXLC------GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 99 VYKGRLLDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYN-GDT 157
V K + ++ +NE + + +V L + +N ++ E++P G + + G
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF 138
Query: 158 SKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLA 217
S+P + Y I + EYLH S +++ D+KP N+L+D+ +++DFG A
Sbjct: 139 SEPHA-----RFYAAQIVLT--FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 218 KLCTTKEGIVSSLLGARGIIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
K + + G Y+APE + S+ + + D ++ G++I E+
Sbjct: 189 KRVKGRTWXLC------GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 16/166 (9%)
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQY 163
L EV + +H N+V L L+ E+ G + + V +G +
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 164 LRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTK 223
++ + I ++Y H I+H D+K N+LLD D KI+DFG + T
Sbjct: 117 AKFRQ-------IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-- 164
Query: 224 EGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ L G Y APE+F + + DV+S G+++ LV
Sbjct: 165 --FGNKLDAFCGAPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 207
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+L+D+ +++DFG AK + ++ G Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA------GTPEY 204
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV--SSLLGA 233
I L+YLH +++ D+K N++LD+D KI+DFGL KEGI +++
Sbjct: 119 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLC-----KEGIKDGATMKXF 171
Query: 234 RGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G Y+APEV N + D + G+++ E++
Sbjct: 172 CGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 205
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV--SSLLGA 233
I L+YLH +++ D+K N++LD+D KI+DFGL KEGI +++
Sbjct: 117 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLC-----KEGIKDGATMKXF 169
Query: 234 RGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G Y+APEV N + D + G+++ E++
Sbjct: 170 CGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 203
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIV--SSLLGA 233
I L+YLH +++ D+K N++LD+D KI+DFGL KEGI +++
Sbjct: 118 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLC-----KEGIKDGATMKXF 170
Query: 234 RGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
G Y+APEV N + D + G+++ E++
Sbjct: 171 CGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 204
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 86/209 (41%), Gaps = 37/209 (17%)
Query: 91 LGQGGFGGVYKGRLLDDFV--------NEVASISRTSHVNVVTL-----LGFCLE----- 132
+G+G +G V++G + V +E + T N V L LGF
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 133 --GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLH---HGC 187
LI + GSL ++ T LR IV+ IA GL +LH G
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLR------IVLSIASGLAHLHIEIFGT 128
Query: 188 STK--ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR-GIIGYIAPEV 244
K I H D+K NIL+ ++ I+D GLA + + + R G Y+APEV
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 245 FSRNFG----EVSHKSDVYSFGMMIMELV 269
+ + D+++FG+++ E+
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 18/140 (12%)
Query: 110 NEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEK 168
E+ + R SH N++ L +L+ E + G L ++ V G Y
Sbjct: 97 TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG-------YYSERD 149
Query: 169 MYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDE---DFCPKISDFGLAKLCTTKEG 225
+ V I + + YLH I+H D+KP N+L D KI+DFGL+K+ +
Sbjct: 150 AADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI-VEHQV 205
Query: 226 IVSSLLGARGIIGYIAPEVF 245
++ ++ G GY APE+
Sbjct: 206 LMKTVCGTP---GYCAPEIL 222
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 86/209 (41%), Gaps = 37/209 (17%)
Query: 91 LGQGGFGGVYKGRLLDDFV--------NEVASISRTSHVNVVTL-----LGFCLE----- 132
+G+G +G V++G + V +E + T N V L LGF
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 133 --GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLH---HGC 187
LI + GSL ++ T LR IV+ IA GL +LH G
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLR------IVLSIASGLAHLHIEIFGT 128
Query: 188 STK--ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR-GIIGYIAPEV 244
K I H D+K NIL+ ++ I+D GLA + + + R G Y+APEV
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 245 FSRNFG----EVSHKSDVYSFGMMIMELV 269
+ + D+++FG+++ E+
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
I EYLH S +++ D+KP N+L+DE +++DFG AK + + G
Sbjct: 137 IVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC------G 187
Query: 236 IIGYIAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
Y+APE + S+ + + D ++ G++I E+
Sbjct: 188 TPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 220
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 81/210 (38%), Gaps = 44/210 (20%)
Query: 87 FKDKLGQGGFGGVYKGRL--------------------LDDFVNEVASISRTSHVNVVTL 126
D LGQG V++GR +D + E + + +H N+V L
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 127 LGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVI-GIAKGLEYL 183
E R LI EF P GSL Y Y E + IV+ + G+ +L
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSL----YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 184 HHGCSTKILHFDIKPHNILL----DEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
I+H +IKP NI+ D K++DFG A+ E V G Y
Sbjct: 129 R---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX----LYGTEEY 181
Query: 240 IAPEVFSRNFGEVSHKS------DVYSFGM 263
+ P+++ R H+ D++S G+
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGV 211
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDE---DFCPKISDFGLAKLCTTKEGIV 227
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 182
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGC 271
+ Y+APEV + S D++S G +IM ++ C
Sbjct: 183 TPCYTPY----YVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 219
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDE---DFCPKISDFGLAKLCTTKEGIV 227
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 125 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 181
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGC 271
+ Y+APEV + S D++S G +IM ++ C
Sbjct: 182 TPCYTPY----YVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 218
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDE---DFCPKISDFGLAKLCTTKEGIV 227
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 165 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 221
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGC 271
+ Y+APEV + S D++S G +IM ++ C
Sbjct: 222 TPCYTPY----YVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 258
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDE---DFCPKISDFGLAKLCTTKEGIV 227
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 127 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 183
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGC 271
+ Y+APEV + S D++S G +IM ++ C
Sbjct: 184 TPCYTPY----YVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 220
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDE---DFCPKISDFGLAKLCTTKEGIV 227
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 177
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGC 271
+ Y+APEV + S D++S G +IM ++ C
Sbjct: 178 TPCYTPY----YVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 214
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDE---DFCPKISDFGLAKLCTTKEGIV 227
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 177
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGC 271
+ Y+APEV + S D++S G +IM ++ C
Sbjct: 178 TPCYTPY----YVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 214
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 13/104 (12%)
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDE---DFCPKISDFGLAKLCTTKEGIV 227
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 135 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 191
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGC 271
+ Y+APEV + D++S G +IM ++ C
Sbjct: 192 TPCYTPY----YVAPEVLGPE--KYDKSCDMWSLG-VIMYILLC 228
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARG 235
IA L YLH S I++ D+KP NILLD ++DFGL K S+ G
Sbjct: 148 IASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTP- 203
Query: 236 IIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
Y+APEV + D + G ++ E++
Sbjct: 204 --EYLAPEVLHKQ--PYDRTVDWWCLGAVLYEML 233
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDE---DFCPKISDFGLAKLCTTKEGIV 227
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 175
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGC 271
+ Y+APEV + S D++S G +IM ++ C
Sbjct: 176 TPCYTPY----YVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 212
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDE---DFCPKISDFGLAKLCTTKEGIV 227
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 120 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 176
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGC 271
+ Y+APEV + S D++S G +IM ++ C
Sbjct: 177 TPCYTPY----YVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 213
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDE---DFCPKISDFGLAKLCTTKEGIV 227
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 171 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 227
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGC 271
+ Y+APEV + S D++S G +IM ++ C
Sbjct: 228 TPCYTPY----YVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 264
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 72/171 (42%), Gaps = 22/171 (12%)
Query: 109 VNEVASISRTSHVNVVTLLGF----CLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL 164
+ E+ + H N++T+ E N I + + L + + Q L
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-------STQML 109
Query: 165 RWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLC---- 220
+ + + + ++ LH + ++H D+KP N+L++ + K+ DFGLA++
Sbjct: 110 SDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 221 ---TTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMEL 268
+ G S + Y APEV + + S DV+S G ++ EL
Sbjct: 167 ADNSEPTGQQSGMTEXVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+L+D+ +++DFG AK +G +L G Y
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGATWTLCGTP---EY 225
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I E+
Sbjct: 226 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 254
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E+ P G + + G S+P + Y I + EYLH
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQIVLT--FEYLH- 158
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+++D+ +++DFG AK + + G Y+APE +
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 210
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 211 LSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 16/166 (9%)
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQY 163
L EV + +H N+V L L+ E+ G + + V +G +
Sbjct: 58 LQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 117
Query: 164 LRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTK 223
++ + I ++Y H I+H D+K N+LLD D KI+DFG + T
Sbjct: 118 AKFRQ-------IVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFT-- 165
Query: 224 EGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + L G Y APE+F + + DV+S G+++ LV
Sbjct: 166 --VGNKLDTFCGSPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 208
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 86/209 (41%), Gaps = 37/209 (17%)
Query: 91 LGQGGFGGVYKGRLLDDFV--------NEVASISRTSHVNVVTL-----LGFCLE----- 132
+G+G +G V++G + V +E + T N V L LGF
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 104
Query: 133 --GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLH---HGC 187
LI + GSL ++ T LR IV+ IA GL +LH G
Sbjct: 105 HSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLR------IVLSIASGLAHLHIEIFGT 157
Query: 188 STK--ILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGAR-GIIGYIAPEV 244
K I H D+K NIL+ ++ I+D GLA + + + R G Y+APEV
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 217
Query: 245 FSRNFG----EVSHKSDVYSFGMMIMELV 269
+ + D+++FG+++ E+
Sbjct: 218 LDETIQVDCFDSYKRVDIWAFGLVLWEVA 246
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+L+D+ +++DFG AK + + G Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX------GTPEY 204
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 99
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E++P G + + G +P + Y I + EYLH
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA-----RFYAAQIVLT--FEYLH- 151
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+L+D+ +++DFG AK + + G Y+APE +
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 203
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 204 LSKGYNKA---VDWWALGVLIYEMAA 226
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+++D+ K++DFG AK + + G Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEY 204
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E++P G + + G +P + Y I + EYLH
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA-----RFYAAQIVLT--FEYLH- 158
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+L+D+ +++DFG AK + + G Y+APE +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 210
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 211 LSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E++P G + + G +P + Y I + EYLH
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA-----RFYAAQIVLT--FEYLH- 158
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+L+D+ +++DFG AK + + G Y+APE +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 210
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 211 LSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 47/206 (22%)
Query: 91 LGQGGFGGV-----------YKGRLLDDFVNEVASISRTSH----------VNVVTL--L 127
LG G FG V Y ++LD +V + + H VN L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDK--QKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 128 GFCLEGN-NRALIYEFMPNGSLEKFVYN-GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHH 185
F + N N ++ E++P G + + G +P + Y I + EYLH
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA-----RFYAAQIVLT--FEYLH- 159
Query: 186 GCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE-V 244
S +++ D+KP N+L+D+ +++DFG AK + + G Y+APE +
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII 211
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVG 270
S+ + + D ++ G++I E+
Sbjct: 212 LSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 13/104 (12%)
Query: 171 EIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDE---DFCPKISDFGLAKLCTTKEGIV 227
EI+ I + ++YLH S I H D+KP N+L + K++DFG AK T+ +
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 175
Query: 228 SSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGC 271
Y+APEV + S D++S G +IM ++ C
Sbjct: 176 EPCYTPY----YVAPEVLGPEKYDKS--CDMWSLG-VIMYILLC 212
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 16/166 (9%)
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQY 163
L EV + +H N+V L L+ E+ G + + V +G +
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 164 LRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTK 223
++ + I ++Y H I+H D+K N+LLD D KI+DFG + T
Sbjct: 117 AKFRQ-------IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-- 164
Query: 224 EGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ L G Y APE+F + + DV+S G+++ LV
Sbjct: 165 --FGNKLDTFCGSPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 207
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 16/166 (9%)
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQY 163
L EV + +H N+V L L+ E+ G + + V +G +
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 164 LRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTK 223
++ + I ++Y H I+H D+K N+LLD D KI+DFG + T
Sbjct: 117 AKFRQ-------IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 166
Query: 224 EGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+F + + DV+S G+++ LV
Sbjct: 167 NKLDTFC----GSPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 207
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+L+D+ +++DFG AK + + G Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEY 204
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 16/166 (9%)
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQY 163
L EV + +H N+V L L+ E+ G + + V +G +
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 164 LRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTK 223
++ + I ++Y H I+H D+K N+LLD D KI+DFG + T
Sbjct: 117 AKFRQ-------IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-- 164
Query: 224 EGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ L G Y APE+F + + DV+S G+++ LV
Sbjct: 165 --FGNKLDTFCGSPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 207
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+L+D+ +++DFG AK + + G Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEY 204
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 42/220 (19%)
Query: 76 NFSDVKKLTNSFKDKLGQGGFGGVYKGRLLDD-------FVNEVASISRT---------- 118
F D+ KLT+ LG+G + V L + + + A SR+
Sbjct: 9 KFEDMYKLTSEL---LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLY 65
Query: 119 ---SHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIG 175
+ N++ L+ F + L++E + GS+ + ++ + +V
Sbjct: 66 QCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQ------KHFNEREASRVVRD 119
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLD--EDFCP-KISDFGLA---KLCTTKEGIVS- 228
+A L++LH + I H D+KP NIL + E P KI DF L KL + I +
Sbjct: 120 VAAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTP 176
Query: 229 SLLGARGIIGYIAP---EVFSRNFGEVSHKSDVYSFGMMI 265
L G Y+AP EVF+ + D++S G+++
Sbjct: 177 ELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVL 216
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 16/166 (9%)
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQY 163
L EV +H N+V L L+ E+ G + + V +G +
Sbjct: 57 LQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEAR 116
Query: 164 LRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTK 223
++ + I ++Y H I+H D+K N+LLD D KI+DFG + T
Sbjct: 117 AKFRQ-------IVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFT-- 164
Query: 224 EGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ L G Y APE+F + + DV+S G+++ LV
Sbjct: 165 --FGNKLDAFCGAPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 207
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+L+D+ +++DFG AK + + G Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEY 204
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+L+D+ +++DFG AK + + G Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEY 205
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I E+
Sbjct: 206 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+L+D+ +++DFG AK + + G Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEY 204
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 26/126 (20%)
Query: 109 VNEVASISRTSHVNVVTL--------------LGFCLEGNNRALIYEFMPNGSLEKFVYN 154
+ E+ I R H N+V + +G E N+ ++ E+M L +
Sbjct: 56 LREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQ 114
Query: 155 GDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLD-EDFCPKISD 213
G + L MY+++ +GL+Y+H S +LH D+KP N+ ++ ED KI D
Sbjct: 115 GPLLEEHARLF---MYQLL----RGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGD 164
Query: 214 FGLAKL 219
FGLA++
Sbjct: 165 FGLARI 170
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+L+D+ +++DFG AK + + G Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEY 204
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+L+D+ +++DFG AK + + G Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEY 204
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+L+D+ +++DFG AK + + G Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEY 204
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+L+D+ +++DFG AK + + G Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEY 204
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 124 VTLLGFCLEGNNRA-LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 182
+T L + + N L+ ++ G L + + P R+ + E+V+ I +
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF-YIGEMVLAI-DSIHQ 193
Query: 183 LHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAP 242
LH+ +H DIKP N+LLD + +++DFG + L +G V S + A G YI+P
Sbjct: 194 LHY------VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSV-AVGTPDYISP 245
Query: 243 EVFSR---NFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDR 299
E+ G+ + D +S G+ + E++ + + +S E Y I H E+
Sbjct: 246 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA--ESLVETYGK--IMNHEER-- 299
Query: 300 EFKLPGVVTRKENEIAKKMIIVGLWCIQAR 329
F+ P VT E K +I L C + R
Sbjct: 300 -FQFPSHVTDVSEE--AKDLIQRLICSRER 326
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+L+D+ +++DFG AK + + G Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEY 204
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 124 VTLLGFCLEGNNRA-LIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEY 182
+T L + + N L+ ++ G L + + P R+ + E+V+ I +
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF-YIGEMVLAI-DSIHQ 209
Query: 183 LHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAP 242
LH+ +H DIKP N+LLD + +++DFG + L +G V S + A G YI+P
Sbjct: 210 LHY------VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSV-AVGTPDYISP 261
Query: 243 EVFSR---NFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDR 299
E+ G+ + D +S G+ + E++ + + +S E Y I H E+
Sbjct: 262 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA--ESLVETYGK--IMNHEER-- 315
Query: 300 EFKLPGVVTRKENEIAKKMIIVGLWCIQAR 329
F+ P VT E K +I L C + R
Sbjct: 316 -FQFPSHVTDVSEE--AKDLIQRLICSRER 342
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 62/211 (29%)
Query: 103 RLLDDFVN------EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSLEKF----- 151
R+ +D ++ E+A ++R +H +VV +L + + +EKF
Sbjct: 88 RVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKD-------------VEKFDELYV 134
Query: 152 ---VYNGDTSKPCQ---YLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDE 205
+ + D K + YL + ++ + G++Y+H S ILH D+KP N L+++
Sbjct: 135 VLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQ 191
Query: 206 DFCPKISDFGLAKLCTTKEGIVSSLLGA------------------RGIIGYI------A 241
D K+ DFGLA+ E S L + R + G++ A
Sbjct: 192 DCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRA 251
Query: 242 PE--VFSRNFGEVSHKSDVYSFGMMIMELVG 270
PE + N+ E DV+S G + EL+
Sbjct: 252 PELILLQENYTEA---IDVWSIGCIFAELLN 279
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+L+D+ +++DFG AK + + G Y
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEY 225
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I E+
Sbjct: 226 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 254
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+L+D+ +++DFG AK + + G Y
Sbjct: 149 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEY 199
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I E+
Sbjct: 200 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 228
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 16/166 (9%)
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQY 163
L EV + +H N+V L L+ E+ G + + V +G +
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 164 LRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTK 223
++ + I ++Y H I+H D+K N+LLD D KI+DFG + T
Sbjct: 117 AKFRQ-------IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-- 164
Query: 224 EGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ L G Y APE+F + + DV+S G+++ LV
Sbjct: 165 --FGNKLDEFCGSPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 207
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+L+D+ +++DFG AK + + G Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEY 204
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I E+
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 31/160 (19%)
Query: 120 HVNVVTLLGFCLEGNNRALIYEFMPNGSL------EKFVYNGDTSKPCQYLRWEKMYEIV 173
H N+V L E + LI++ + G L ++ D S Q +
Sbjct: 69 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI--------- 119
Query: 174 IGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDF---CPKISDFGLAKLCTTKEGIVSSL 230
LE + H ++H ++KP N+LL K++DFGLA EG +
Sbjct: 120 ------LEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQAW 170
Query: 231 LGARGIIGYIAPEVFSRN-FGEVSHKSDVYSFGMMIMELV 269
G G GY++PEV ++ +G+ D+++ G+++ L+
Sbjct: 171 FGFAGTPGYLSPEVLRKDPYGK---PVDLWACGVILYILL 207
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILLD---EDFCPKISDFGLAKLCTTKEGIVSSLLG 232
I + LE ++H I+H D+KP N+LL + K++DFGLA +G + G
Sbjct: 136 IHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA---IEVQGEQQAWFG 192
Query: 233 ARGIIGYIAPEVFSRN-FGEVSHKSDVYSFGMMIMELV 269
G GY++PEV ++ +G+ D+++ G+++ L+
Sbjct: 193 FAGTPGYLSPEVLRKDPYGK---PVDIWACGVILYILL 227
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIG 238
LE + H + +LH DIK NIL+D + K+ DFG L K+ + + G R
Sbjct: 120 LEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTR---- 173
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQD 298
+P + R + V+S G+++ ++V ++ F H D
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMV------------CGDIPFEH--------D 213
Query: 299 REFKLPGVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
E V R+ + +I WC+ RPSDRP E+
Sbjct: 214 EEIIRGQVFFRQRVSXECQHLI--RWCLALRPSDRPTFEEI 252
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 108/275 (39%), Gaps = 60/275 (21%)
Query: 91 LGQGGFGGVYKG-RLLD-----------DFVNEVASISRTSHVNVVTLL------GFCLE 132
LG GGFG VY G R+ D D +++ + + V + +L GF
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 88
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL------RWEKMYEIVIGI-AKGLEYLHH 185
G R L + P+ FV + +P Q L R E+ + LE + H
Sbjct: 89 GVIRLLDWFERPD----SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 186 GCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV 244
+ +LH DIK NIL+D + K+ DFG L K+ + + G R +P
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTR----VYSPPE 198
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
+ R + V+S G+++ ++V ++ F H D E
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMV------------CGDIPFEH--------DEEIIRG 238
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
V R+ + +I WC+ RPSDRP E+
Sbjct: 239 QVFFRQRVSXECQHLI--RWCLALRPSDRPTFEEI 271
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 108/275 (39%), Gaps = 60/275 (21%)
Query: 91 LGQGGFGGVYKG-RLLD-----------DFVNEVASISRTSHVNVVTLL------GFCLE 132
LG GGFG VY G R+ D D +++ + + V + +L GF
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 89
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL------RWEKMYEIVIGI-AKGLEYLHH 185
G R L + P+ FV + +P Q L R E+ + LE + H
Sbjct: 90 GVIRLLDWFERPD----SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 186 GCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV 244
+ +LH DIK NIL+D + K+ DFG L K+ + + G R +P
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTR----VYSPPE 199
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
+ R + V+S G+++ ++V ++ F H D E
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMV------------CGDIPFEH--------DEEIIRG 239
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
V R+ + +I WC+ RPSDRP E+
Sbjct: 240 QVFFRQRVSXECQHLI--RWCLALRPSDRPTFEEI 272
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 51/212 (24%)
Query: 88 KDKLGQGGFGGVYK---------------------GRLLDDFVNEVASISRTSHVNVVTL 126
K++LG+G F V + R E + H N+V L
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 127 LGFCLEGNNRALIYEFMPNGSL------EKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGL 180
E + L+++ + G L +F D S Q I + +
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ------------QILESI 118
Query: 181 EYLHHGCSTKILHFDIKPHNILL---DEDFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
Y H S I+H ++KP N+LL + K++DFGLA E + G G
Sbjct: 119 AYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----AWHGFAGTP 171
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
GY++PEV ++ S D+++ G+++ L+
Sbjct: 172 GYLSPEVLKKD--PYSKPVDIWACGVILYILL 201
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 51/212 (24%)
Query: 88 KDKLGQGGFGGVYK---------------------GRLLDDFVNEVASISRTSHVNVVTL 126
K++LG+G F V + R E + H N+V L
Sbjct: 10 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 69
Query: 127 LGFCLEGNNRALIYEFMPNGSL------EKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGL 180
E + L+++ + G L +F D S Q I + +
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ------------QILESI 117
Query: 181 EYLHHGCSTKILHFDIKPHNILL---DEDFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
Y H S I+H ++KP N+LL + K++DFGLA E + G G
Sbjct: 118 AYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----AWHGFAGTP 170
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
GY++PEV ++ S D+++ G+++ L+
Sbjct: 171 GYLSPEVLKKD--PYSKPVDIWACGVILYILL 200
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 84/214 (39%), Gaps = 52/214 (24%)
Query: 88 KDKLGQGGFGGVYK---------------------GRLLDDFVNEVASISRTSHVNVVTL 126
K++LG+G F V + R E + H N+V L
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 127 LGFCLEGNNRALIYEFMPNGSL------EKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGL 180
E + L+++ + G L +F D S Q I + +
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ------------QILESI 118
Query: 181 EYLHHGCSTKILHFDIKPHNILL---DEDFCPKISDFGLAKLCTTKEGIVSSLLGARGII 237
Y H S I+H ++KP N+LL + K++DFGLA E + G G
Sbjct: 119 AYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----AWHGFAGTP 171
Query: 238 GYIAPEVFSRNFGEVSHKSDVYSFGMMI-MELVG 270
GY++PEV ++ S D+++ G+++ + LVG
Sbjct: 172 GYLSPEVLKKD--PYSKPVDIWACGVILYILLVG 203
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 122 NVVTLLGFCLEGNNR--ALIYEFMPNGSLEKFVYNGDTSKPCQYLRWEKMYEIVIGIAKG 179
N++TL + +R AL++E + N ++ + T ++ MYEI+ K
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LRQTLTDYDIRFY----MYEIL----KA 143
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIG 238
L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKG 199
Query: 239 YIAPEVFSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEV 285
PE+ ++ + D++S G M+ ++ K G D+ ++
Sbjct: 200 ---PELLV-DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILL---DEDFCPKISDFGLAKLCTTKEGIVSSLLG 232
I + LE ++H I+H D+KP N+LL + K++DFGLA +G + G
Sbjct: 109 IQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA---IEVQGDQQAWFG 165
Query: 233 ARGIIGYIAPEVFSRN 248
G GY++PEV ++
Sbjct: 166 FAGTPGYLSPEVLRKD 181
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 108/275 (39%), Gaps = 60/275 (21%)
Query: 91 LGQGGFGGVYKG-RLLD-----------DFVNEVASISRTSHVNVVTLL------GFCLE 132
LG GGFG VY G R+ D D +++ + + V + +L GF
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 116
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL------RWEKMYEIVIGI-AKGLEYLHH 185
G R L + P+ FV + +P Q L R E+ + LE + H
Sbjct: 117 GVIRLLDWFERPDS----FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 186 GCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV 244
+ +LH DIK NIL+D + K+ DFG L K+ + + G R +P
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTR----VYSPPE 226
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
+ R + V+S G+++ ++V ++ F H D E
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMV------------CGDIPFEH--------DEEIIRG 266
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
V R+ + +I WC+ RPSDRP E+
Sbjct: 267 QVFFRQRVSXECQHLI--RWCLALRPSDRPTFEEI 299
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 108/275 (39%), Gaps = 60/275 (21%)
Query: 91 LGQGGFGGVYKG-RLLD-----------DFVNEVASISRTSHVNVVTLL------GFCLE 132
LG GGFG VY G R+ D D +++ + + V + +L GF
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 96
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL------RWEKMYEIVIGI-AKGLEYLHH 185
G R L + P+ FV + +P Q L R E+ + LE + H
Sbjct: 97 GVIRLLDWFERPD----SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 152
Query: 186 GCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV 244
+ +LH DIK NIL+D + K+ DFG L K+ + + G R +P
Sbjct: 153 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTR----VYSPPE 206
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
+ R + V+S G+++ ++V ++ F H D E
Sbjct: 207 WIRYHRYHGRSAAVWSLGILLYDMV------------CGDIPFEH--------DEEIIRG 246
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
V R+ + +I WC+ RPSDRP E+
Sbjct: 247 QVFFRQRVSXECQHLI--RWCLALRPSDRPTFEEI 279
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 108/275 (39%), Gaps = 60/275 (21%)
Query: 91 LGQGGFGGVYKG-RLLD-----------DFVNEVASISRTSHVNVVTLL------GFCLE 132
LG GGFG VY G R+ D D +++ + + V + +L GF
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 121
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL------RWEKMYEIVIGI-AKGLEYLHH 185
G R L + P+ FV + +P Q L R E+ + LE + H
Sbjct: 122 GVIRLLDWFERPD----SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 177
Query: 186 GCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV 244
+ +LH DIK NIL+D + K+ DFG L K+ + + G R +P
Sbjct: 178 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTR----VYSPPE 231
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
+ R + V+S G+++ ++V ++ F H D E
Sbjct: 232 WIRYHRYHGRSAAVWSLGILLYDMV------------CGDIPFEH--------DEEIIRG 271
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
V R+ + +I WC+ RPSDRP E+
Sbjct: 272 QVFFRQRVSXECQHLI--RWCLALRPSDRPTFEEI 304
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 24/180 (13%)
Query: 99 VYKGRLLDDFVN-EVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGD 156
+ +G +D+ V E+ + H N+V L + A++ E+ G L E+ G
Sbjct: 51 IERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR 110
Query: 157 TSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCP--KISDF 214
S+ ++++ G+ Y H + ++ H D+K N LLD P KI DF
Sbjct: 111 FSEDEARFFFQQLI-------SGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDF 160
Query: 215 GLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNF--GEVSHKSDVYSFGMMI-MELVGC 271
G +K S++ G YIAPEV + G+V +DV+S G+ + + LVG
Sbjct: 161 GYSKSSVLHSQPKSTV----GTPAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVGA 213
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
Query: 185 HGCSTKILHFDIKPHNILLDE-DFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPE 243
H S + H DIKPHN+L++E D K+ DFG AK + E V+ + Y APE
Sbjct: 146 HLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY----YRAPE 201
Query: 244 VFSRNFGEVSHKS--DVYSFGMMIMELV 269
+ FG + + D++S G + E++
Sbjct: 202 LI---FGNQHYTTAVDIWSVGCIFAEMM 226
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 108/275 (39%), Gaps = 60/275 (21%)
Query: 91 LGQGGFGGVYKG-RLLD-----------DFVNEVASISRTSHVNVVTLL------GFCLE 132
LG GGFG VY G R+ D D +++ + + V + +L GF
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 74
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL------RWEKMYEIVIGI-AKGLEYLHH 185
G R L + P+ FV + +P Q L R E+ + LE + H
Sbjct: 75 GVIRLLDWFERPD----SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 186 GCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV 244
+ +LH DIK NIL+D + K+ DFG L K+ + + G R +P
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTR----VYSPPE 184
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
+ R + V+S G+++ ++V ++ F H D E
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMV------------CGDIPFEH--------DEEIIRG 224
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
V R+ + +I WC+ RPSDRP E+
Sbjct: 225 QVFFRQRVSSECQHLI--RWCLALRPSDRPTFEEI 257
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 108/275 (39%), Gaps = 60/275 (21%)
Query: 91 LGQGGFGGVYKG-RLLD-----------DFVNEVASISRTSHVNVVTLL------GFCLE 132
LG GGFG VY G R+ D D +++ + + V + +L GF
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 101
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL------RWEKMYEIVIGI-AKGLEYLHH 185
G R L + P+ FV + +P Q L R E+ + LE + H
Sbjct: 102 GVIRLLDWFERPDS----FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 186 GCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV 244
+ +LH DIK NIL+D + K+ DFG L K+ + + G R +P
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTR----VYSPPE 211
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
+ R + V+S G+++ ++V ++ F H D E
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMV------------CGDIPFEH--------DEEIIRG 251
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
V R+ + +I WC+ RPSDRP E+
Sbjct: 252 QVFFRQRVSSECQHLI--RWCLALRPSDRPTFEEI 284
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 176 IAKGLEYLHHGCSTKILHFDIKPHNILL---DEDFCPKISDFGLAKLCTTKEGIVSSLLG 232
I + LE ++H I+H D+KP N+LL + K++DFGLA +G + G
Sbjct: 109 IQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA---IEVQGDQQAWFG 165
Query: 233 ARGIIGYIAPEVFSRN 248
G GY++PEV ++
Sbjct: 166 FAGTPGYLSPEVLRKD 181
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 108/275 (39%), Gaps = 60/275 (21%)
Query: 91 LGQGGFGGVYKG-RLLD-----------DFVNEVASISRTSHVNVVTLL------GFCLE 132
LG GGFG VY G R+ D D +++ + + V + +L GF
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 88
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL------RWEKMYEIVIGI-AKGLEYLHH 185
G R L + P+ FV + +P Q L R E+ + LE + H
Sbjct: 89 GVIRLLDWFERPD----SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 186 GCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV 244
+ +LH DIK NIL+D + K+ DFG L K+ + + G R +P
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTR----VYSPPE 198
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
+ R + V+S G+++ ++V ++ F H D E
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMV------------CGDIPFEH--------DEEIIRG 238
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
V R+ + +I WC+ RPSDRP E+
Sbjct: 239 QVFFRQRVSSECQHLI--RWCLALRPSDRPTFEEI 271
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 108/275 (39%), Gaps = 60/275 (21%)
Query: 91 LGQGGFGGVYKG-RLLD-----------DFVNEVASISRTSHVNVVTLL------GFCLE 132
LG GGFG VY G R+ D D +++ + + V + +L GF
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 89
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL------RWEKMYEIVIGI-AKGLEYLHH 185
G R L + P+ FV + +P Q L R E+ + LE + H
Sbjct: 90 GVIRLLDWFERPD----SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 186 GCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV 244
+ +LH DIK NIL+D + K+ DFG L K+ + + G R +P
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTR----VYSPPE 199
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
+ R + V+S G+++ ++V ++ F H D E
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMV------------CGDIPFEH--------DEEIIRG 239
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
V R+ + +I WC+ RPSDRP E+
Sbjct: 240 QVFFRQRVSSECQHLI--RWCLALRPSDRPTFEEI 272
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 20/138 (14%)
Query: 138 LIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDI 196
+I E M G L + GD Q + EI+ I +++LH S I H D+
Sbjct: 84 IIMECMEGGELFSRIQERGD-----QAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDV 135
Query: 197 KPHNILL---DEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVS 253
KP N+L ++D K++DFG AK TT+ + + Y+APEV + S
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAKE-TTQNALQTPCYTPY----YVAPEVLGPEKYDKS 190
Query: 254 HKSDVYSFGMMIMELVGC 271
D++S G +IM ++ C
Sbjct: 191 --CDMWSLG-VIMYILLC 205
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 20/138 (14%)
Query: 138 LIYEFMPNGSL-EKFVYNGDTSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDI 196
+I E M G L + GD Q + EI+ I +++LH S I H D+
Sbjct: 103 IIMECMEGGELFSRIQERGD-----QAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDV 154
Query: 197 KPHNILL---DEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRNFGEVS 253
KP N+L ++D K++DFG AK TT+ + + Y+APEV +
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAKE-TTQNALQTPCYTPY----YVAPEVLGPE--KYD 207
Query: 254 HKSDVYSFGMMIMELVGC 271
D++S G +IM ++ C
Sbjct: 208 KSCDMWSLG-VIMYILLC 224
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 16/166 (9%)
Query: 105 LDDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL-EKFVYNGDTSKPCQY 163
L EV + +H N+V L L+ E+ G + + V +G +
Sbjct: 50 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-------W 102
Query: 164 LRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTK 223
++ ++ I ++Y H I+H D+K N+LLD D KI+DFG + T
Sbjct: 103 MKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 159
Query: 224 EGIVSSLLGARGIIGYIAPEVFSRNFGEVSHKSDVYSFGMMIMELV 269
+ + G Y APE+F + + DV+S G+++ LV
Sbjct: 160 NKLDTFC----GSPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 200
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 108/275 (39%), Gaps = 60/275 (21%)
Query: 91 LGQGGFGGVYKG-RLLD-----------DFVNEVASISRTSHVNVVTLL------GFCLE 132
LG GGFG VY G R+ D D +++ + + V + +L GF
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 102
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL------RWEKMYEIVIGI-AKGLEYLHH 185
G R L + P+ FV + +P Q L R E+ + LE + H
Sbjct: 103 GVIRLLDWFERPD----SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 186 GCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV 244
+ +LH DIK NIL+D + K+ DFG L K+ + + G R +P
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTR----VYSPPE 212
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
+ R + V+S G+++ ++V ++ F H D E
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMV------------CGDIPFEH--------DEEIIGG 252
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
V R+ + +I WC+ RPSDRP E+
Sbjct: 253 QVFFRQRVSXECQHLI--RWCLALRPSDRPTFEEI 285
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 180 LEYLHHGCSTKILHFDIKPHNILLDEDFCPKISDFGLAKLCTTKEGIVSSLLGARGIIGY 239
EYLH S +++ D+KP N+L+D+ +++DFG AK + + G Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEY 204
Query: 240 IAPE-VFSRNFGEVSHKSDVYSFGMMIMELVG 270
+APE + S+ + + D ++ G++I ++
Sbjct: 205 LAPEIILSKGYNKA---VDWWALGVLIYQMAA 233
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 34/180 (18%)
Query: 106 DDFVNEVASISRTSHVNVVTLLGFCLEGNNRALIYEFMPNGSL---------EKFVYNGD 156
+D E + H ++V LL +++EFM L FVY+
Sbjct: 73 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 132
Query: 157 TSKPCQYLRWEKMYEIVIGIAKGLEYLHHGCSTKILHFDIKPHNILL--DEDFCP-KISD 213
+ Y+R I + L Y H I+H D+KPH +LL E+ P K+
Sbjct: 133 VAS--HYMRQ---------ILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGG 178
Query: 214 FGLAKLCTTKEGIVSSLLGARGIIGYIAPEVFSRN-FGEVSHKSDVYSFGMMIMELV-GC 271
FG+A + + G+V+ G G ++APEV R +G+ DV+ G+++ L+ GC
Sbjct: 179 FGVA-IQLGESGLVAG--GRVGTPHFMAPEVVKREPYGK---PVDVWGCGVILFILLSGC 232
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 108/275 (39%), Gaps = 60/275 (21%)
Query: 91 LGQGGFGGVYKG-RLLD-----------DFVNEVASISRTSHVNVVTLL------GFCLE 132
LG GGFG VY G R+ D D +++ + + V + +L GF
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 73
Query: 133 GNNRALIYEFMPNGSLEKFVYNGDTSKPCQYL------RWEKMYEIVIGI-AKGLEYLHH 185
G R L + P+ FV + +P Q L R E+ + LE + H
Sbjct: 74 GVIRLLDWFERPDS----FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 186 GCSTKILHFDIKPHNILLDEDFCP-KISDFGLAKLCTTKEGIVSSLLGARGIIGYIAPEV 244
+ +LH DIK NIL+D + K+ DFG L K+ + + G R +P
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTR----VYSPPE 183
Query: 245 FSRNFGEVSHKSDVYSFGMMIMELVGCKNNLDSGVDSSSEVYFPHWIYRHVEQDREFKLP 304
+ R + V+S G+++ ++V ++ F H D E
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMV------------CGDIPFEH--------DEEIIRG 223
Query: 305 GVVTRKENEIAKKMIIVGLWCIQARPSDRPPMNEV 339
V R+ + +I WC+ RPSDRP E+
Sbjct: 224 QVFFRQRVSSECQHLI--RWCLALRPSDRPTFEEI 256
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.140 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,963,814
Number of Sequences: 62578
Number of extensions: 467958
Number of successful extensions: 3225
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 192
Number of HSP's that attempted gapping in prelim test: 979
Number of HSP's gapped (non-prelim): 1163
length of query: 372
length of database: 14,973,337
effective HSP length: 100
effective length of query: 272
effective length of database: 8,715,537
effective search space: 2370626064
effective search space used: 2370626064
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)