BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036437
(431 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZWA1|C3H2_ARATH Zinc finger CCCH domain-containing protein 2 OS=Arabidopsis
thaliana GN=At1g03790 PE=2 SV=1
Length = 393
Score = 294 bits (752), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 200/420 (47%), Positives = 251/420 (59%), Gaps = 55/420 (13%)
Query: 26 IEVPPRKLLLQNKKSHHHHHHHHHHQDICSGSPRSGSGSGSDSASYLFYPDQQEMNILHN 85
+E+PPRKLLL +K R + + S+ + D ++ N +
Sbjct: 15 VEIPPRKLLLSSKSFPSDSSSPRSP--------RKHNWNKSNKITSEHEEDNEDNNRENK 66
Query: 86 KFLPFNNTDADSDPDSDPYASDHFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPR 145
++ D+DSD DPYASDHFRM+EFKIRRCTRSRSHDWTDCPFAHP EKARRRDPR
Sbjct: 67 EYC----YDSDSD---DPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPR 119
Query: 146 RYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAH 205
R+ YSG VC E+RRGG CS GDDCEFAHGVFECWLHP RYRTEACKDGK+CKRKVCFFAH
Sbjct: 120 RFQYSGEVCPEFRRGGDCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAH 179
Query: 206 SPRQLRIL-PEISSQYSSSPSSVNNNNQKISSHCCMYCHHHSVNSSPTSTLLGNMSHLSR 264
SPRQLR+L PE S S+SPS N CC++C +SSPTSTLLGN+SHLSR
Sbjct: 180 SPRQLRVLPPENVSGVSASPSPAAKN------PCCLFC-----SSSPTSTLLGNLSHLSR 228
Query: 265 SPSLSPPLSPVKHGLISPISRYSATTPVPADRLSKFSNSSEMSMSYKDVLNELMTSMDAI 324
SPSLSPP+SP + SR + + ++ SM+YKDVL+EL+ S+D++
Sbjct: 229 SPSLSPPMSPANKA--AAFSRLRNRA-----ASAVSAAAAAGSMNYKDVLSELVNSLDSM 281
Query: 325 SFNE---------VSSPMSLTPSNDVNACPW----IDVSSFNVEDQQQFVLSPSTPSPSA 371
S E V++P+S + ++C + + QF LSPSTPS
Sbjct: 282 SLAEALQASSSSPVTTPVSAAAAAFASSCGLSNQRLHLQQQQPSSPLQFALSPSTPSYLT 341
Query: 372 GSIMNPFAAHHDYFSNKSFLDDDQKMINYHNHIHNNSNGSCQLASDTPDPDLGWVNELLT 431
S F + D+ + ++D M + N +GSC DPDLGWVN+LLT
Sbjct: 342 NSPQANFFS-DDFTPRRRQMNDFTAMTAVRENT-NIEDGSCG------DPDLGWVNDLLT 393
>sp|Q9FKW2|C3H61_ARATH Zinc finger CCCH domain-containing protein 61 OS=Arabidopsis
thaliana GN=At5g44260 PE=2 SV=1
Length = 381
Score = 241 bits (615), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 167/374 (44%), Positives = 210/374 (56%), Gaps = 77/374 (20%)
Query: 94 DADSDPDSDPYASDHFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAV 153
D+DS+ DPYA DHFRMYEFKIRRCTRSRSHDWTDCPF+HP EKARRRDPRR+HY+G V
Sbjct: 49 DSDSE---DPYAGDHFRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEV 105
Query: 154 CSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRIL 213
C E+ R G CS GD+C FAHGVFECWLHPSRYRTEACKDGK+CKRKVCFFAHSPRQLR+L
Sbjct: 106 CPEFSRHGDCSRGDECGFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHSPRQLRVL 165
Query: 214 P-----------EISSQYSSSPSSVNNNNQKISSHCCMYCHHHSVNSSPTSTLLGNMSHL 262
P S S + N NN+ CC++C H SPTSTLL
Sbjct: 166 PPSPENHISGGCGGSPSSSPASVLSNKNNR-----CCLFCSH-----SPTSTLLNLSRSP 215
Query: 263 SRSPSLSPPLSPVKHGLISPISRYSATTPVPADRLSKFSNSSEMSMSYKDVLNE------ 316
S S+ PAD+ F S +S VLNE
Sbjct: 216 S-----------------------SSPPLSPADKADAF---SRLSRRRTAVLNELISSLD 249
Query: 317 ---LMTSMDAISFNEVSSPMS---LTPSNDVNAC-------PWIDVSSFNVEDQQ----Q 359
L ++ A S + V+ P+S + S+++++ PW+DV +++ QQ +
Sbjct: 250 SLSLTEALAASSSSPVTMPISTATMIASSNLSSNHHHHRLPPWLDVGDRDLQLQQSSPLR 309
Query: 360 FVLSP-STPSPSAGSIMNPFAAHH-DYFSNKSFLDDDQKMINYHNHIHNNSNGSCQLASD 417
F LSP STPS G + P ++ D F+ + D + + N S ++ S
Sbjct: 310 FALSPSSTPSYLHGQLQPPPSSFFGDEFTPRGGRLSDFSVAAAAAAQARDKN-SFEVGS- 367
Query: 418 TPDPDLGWVNELLT 431
+ D DLGWVN+LLT
Sbjct: 368 SGDLDLGWVNDLLT 381
>sp|O82199|C3H20_ARATH Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis
thaliana GN=At2g19810 PE=2 SV=1
Length = 359
Score = 209 bits (532), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 108/140 (77%), Gaps = 8/140 (5%)
Query: 85 NKFLPFNNTDADSDPD-------SDPYASDHFRMYEFKIRRCTRSRSHDWTDCPFAHPSE 137
++LP N D DSDPD D Y DHFRMYEFK+RRC R RSHDWT+CP+AHP E
Sbjct: 48 QRYLPSNEPDPDSDPDLSGPDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGE 107
Query: 138 KARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCK 197
KARRRDPR++HYSG C E+R+ G C GD CEF+HGVFECWLHP+RYRT+ CKDG NC+
Sbjct: 108 KARRRDPRKFHYSGTACPEFRK-GCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCR 166
Query: 198 RKVCFFAHSPRQLRILPEIS 217
R+VCFFAHSP Q+R+LP S
Sbjct: 167 RRVCFFAHSPDQIRVLPNQS 186
>sp|Q9M0G2|C3H49_ARATH Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis
thaliana GN=At4g29190 PE=2 SV=1
Length = 356
Score = 205 bits (521), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 132/209 (63%), Gaps = 34/209 (16%)
Query: 85 NKFLPFNNTDADSDPD-------SDPYASDHFRMYEFKIRRCTRSRSHDWTDCPFAHPSE 137
++LP N D +S PD D Y+ DHFRMY+FK+RRC R RSHDWT+CP+AHP E
Sbjct: 49 QRYLPSNEPDPESYPDLLGPDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGE 108
Query: 138 KARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCK 197
KARRRDPR+YHYSG C ++R+ GGC GD CEFAHGVFECWLHP+RYRT+ CKDG NC
Sbjct: 109 KARRRDPRKYHYSGTACPDFRK-GGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCL 167
Query: 198 RKVCFFAHSPRQLRILPEISSQYSSSPSSVNNNNQKISSHCCMYCHHHSVNSSPTSTLLG 257
RK+CFFAHSP QLR L ++ SP V++ + +S +
Sbjct: 168 RKICFFAHSPDQLRFL------HTRSPDRVDSFDV-------------------SSPIRA 202
Query: 258 NMSHLSRSP-SLSPPLSPVKHGLISPISR 285
LS SP S SPP+SP SP+++
Sbjct: 203 RAFQLSISPVSGSPPMSPRADSESSPMTQ 231
>sp|Q9FU27|C3H2_ORYSJ Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp.
japonica GN=Os01g0192000 PE=2 SV=1
Length = 386
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 92/154 (59%), Positives = 113/154 (73%), Gaps = 5/154 (3%)
Query: 107 DHFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLG 166
D FRMYEFK+RRC R RSHDWT+CPFAHP EKARRRDPR+YHYSG C ++R+ GGC G
Sbjct: 75 DEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRK-GGCKRG 133
Query: 167 DDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRILPEISS---QYSSS 223
D CE+AHGVFECWLHP+RYRT+ CKDG C+R+VCFFAH+P QLR+LP S +SS
Sbjct: 134 DACEYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPAQQSSPRSVASS 193
Query: 224 PSSVNNNNQKISSHCCM-YCHHHSVNSSPTSTLL 256
P + + + + Y ++SSPTSTL+
Sbjct: 194 PLAESYDGSPLRRQAFESYLTKTIMSSSPTSTLM 227
>sp|Q6L4N4|C3H35_ORYSJ Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa
subsp. japonica GN=Os05g0195200 PE=2 SV=1
Length = 402
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 87/121 (71%), Positives = 99/121 (81%), Gaps = 1/121 (0%)
Query: 104 YASDHFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGC 163
YA D FRMYEFK+RRC R RSHDWT+CPFAHP EKARRRDPRRY YSG C ++R+GG C
Sbjct: 73 YACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRRYCYSGTACPDFRKGG-C 131
Query: 164 SLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRILPEISSQYSSS 223
GD CEFAHGVFECWLHP+RYRT+ CKDG C+R+VCFFAH+P QLR+LP Q S+S
Sbjct: 132 KRGDACEFAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPPSQQQGSNS 191
Query: 224 P 224
P
Sbjct: 192 P 192
>sp|O82307|C3H23_ARATH Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis
thaliana GN=At2g25900 PE=2 SV=1
Length = 315
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 140/235 (59%), Gaps = 19/235 (8%)
Query: 99 PDSDPYASDHFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYR 158
P +D ++SD FR+YEFKIRRC R RSHDWT+CPFAHP EKARRRDPR++HYSG C E+R
Sbjct: 81 PLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFR 140
Query: 159 RGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRILP---- 214
+ G C GD CEF+HGVFECWLHPSRYRT+ CKDG +C+R++CFFAH+ QLR+LP
Sbjct: 141 K-GSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLRVLPCSLD 199
Query: 215 ---EISSQYSSSPSSVNNNNQKISSHCCMYCHHHSVNSSPTSTLLGNMSHLSRSPSLSPP 271
S ++SP+S+ + S S T L+ +M + +
Sbjct: 200 PDLGFFSGLATSPTSI------LVSPSFSPPSESPPLSPSTGELIASMRKMQLNGGGCSW 253
Query: 272 LSPVKHGLISPISRYSATTPVPAD---RLSKFSNSSEMSMSYKDVLNELMTSMDA 323
SP++ + P S S+ P+ A R+ +F +M + + EL M A
Sbjct: 254 SSPMRSAVRLPFS--SSLRPIQAATWPRIREFEIEEAPAMEFVESGKELRAEMYA 306
>sp|Q9LUZ4|C3H66_ARATH Zinc finger CCCH domain-containing protein 66 OS=Arabidopsis
thaliana GN=At5g58620 PE=2 SV=1
Length = 607
Score = 181 bits (459), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 128/216 (59%), Gaps = 30/216 (13%)
Query: 104 YASDHFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGC 163
Y +D FRMY FKI+ C+R+ SHDWT+CPF HP E ARRRDPR+YHYS C E+R+G C
Sbjct: 205 YGTDEFRMYAFKIKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGS-C 263
Query: 164 SLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRILPEISSQYSSS 223
S GD CE+AHG+FECWLHP++YRT CKD NC R+VCFFAH P +LR L Y S+
Sbjct: 264 SRGDTCEYAHGIFECWLHPAQYRTRLCKDETNCSRRVCFFAHKPEELRPL------YPST 317
Query: 224 PSSVNNNNQKISSHCCMYCHHHSVNSSPTSTLLGNMSHLSRSPSLSPPLSPVKHGLISPI 283
S V + SS +S T+ +G +S L + +PPLSP +G+ SPI
Sbjct: 318 GSGVPSPRSSFSSC-----------NSSTAFDMGPISPLPIGATTTPPLSP--NGVSSPI 364
Query: 284 S------RYSATTP----VPADRLSKFSNSSEMSMS 309
+ TP +P RL N+ E+ S
Sbjct: 365 GGGKTWMNWPNITPPALQLPGSRLKSALNAREIDFS 400
>sp|Q2QPW2|C3H67_ORYSJ Zinc finger CCCH domain-containing protein 67 OS=Oryza sativa
subsp. japonica GN=Os12g0515500 PE=2 SV=1
Length = 619
Score = 181 bits (459), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 87/110 (79%)
Query: 104 YASDHFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGC 163
YASD FRMY FK+R C+R+ SHDWT+CPF HP E ARRRDPR+YHYS C E+++G GC
Sbjct: 169 YASDDFRMYSFKVRACSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFKKGAGC 228
Query: 164 SLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRIL 213
GD CE+AHGVFE WLHP++YRT CKDG C R+VCFFAH+P +LR L
Sbjct: 229 RRGDMCEYAHGVFESWLHPAQYRTRLCKDGVGCARRVCFFAHTPDELRPL 278
>sp|P93755|C3H30_ARATH Zinc finger CCCH domain-containing protein 30 OS=Arabidopsis
thaliana GN=At2g41900 PE=1 SV=2
Length = 716
Score = 179 bits (453), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 95/126 (75%), Gaps = 3/126 (2%)
Query: 104 YASDHFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGC 163
YA+D FRMY FK+R C+R+ SHDWT+CPF HP E ARRRDPR++HYS C ++R+ G C
Sbjct: 257 YATDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRK-GAC 315
Query: 164 SLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRILPEISSQYSSS 223
GD CE+AHGVFECWLHP++YRT CKDG C R+VCFFAH+P +LR P +S S+
Sbjct: 316 RRGDMCEYAHGVFECWLHPAQYRTRLCKDGTGCARRVCFFAHTPEELR--PLYASTGSAV 373
Query: 224 PSSVNN 229
PS +N
Sbjct: 374 PSPRSN 379
>sp|Q688R3|C3H33_ORYSJ Zinc finger CCCH domain-containing protein 33 OS=Oryza sativa
subsp. japonica GN=Os05g0128200 PE=2 SV=1
Length = 601
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 97/141 (68%), Gaps = 10/141 (7%)
Query: 98 DPDSDPYASDHFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEY 157
D S +++D FRMY FK++ C+R+ SHDWT+CPF HP E ARRRDPRRY YS C E+
Sbjct: 202 DLKSGLFSTDEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEF 261
Query: 158 RRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRIL---- 213
R+GG C GD CE+AHGVFECWLHP++YRT CKD C R++CFFAH P +LR +
Sbjct: 262 RKGGSCRKGDACEYAHGVFECWLHPAQYRTRLCKDEVGCARRICFFAHKPDELRAVNPSA 321
Query: 214 ------PEISSQYSSSPSSVN 228
P +SS SS P+ ++
Sbjct: 322 VSVGMQPTVSSPRSSPPNGLD 342
>sp|Q10EL1|C3H24_ORYSJ Zinc finger CCCH domain-containing protein 24 OS=Oryza sativa
subsp. japonica GN=Os03g0698800 PE=2 SV=1
Length = 764
Score = 175 bits (444), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Query: 104 YASDHFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGC 163
YASD FRMY FKIR C+R+ SHDWT+CPF HP E ARRRDPR+YHYS C ++R+ G C
Sbjct: 277 YASDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRK-GVC 335
Query: 164 SLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRIL 213
GD CE+AHGVFECWLHP++YRT CKDG +C R+VCFFAH+ +LR L
Sbjct: 336 RRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPL 385
>sp|Q9LXV4|C3H56_ARATH Zinc finger CCCH domain-containing protein 56 OS=Arabidopsis
thaliana GN=At5g12850 PE=2 SV=1
Length = 706
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 98 DPDSDPYASDHFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEY 157
D S Y++D FRM+ FKIR C+R+ SHDWT+CPFAHP E ARRRDPR++HY+ C ++
Sbjct: 247 DIKSGIYSTDEFRMFSFKIRPCSRAYSHDWTECPFAHPGENARRRDPRKFHYTCVPCPDF 306
Query: 158 RRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRIL 213
++ G C GD CE+AHGVFECWLHP++YRT CKDG C R+VCFFAH+ +LR L
Sbjct: 307 KK-GSCKQGDMCEYAHGVFECWLHPAQYRTRLCKDGMGCNRRVCFFAHANEELRPL 361
>sp|Q84SL2|C3H50_ORYSJ Zinc finger CCCH domain-containing protein 50 OS=Oryza sativa
subsp. japonica GN=Os07g0568300 PE=2 SV=1
Length = 657
Score = 168 bits (426), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 73/129 (56%), Positives = 90/129 (69%)
Query: 98 DPDSDPYASDHFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEY 157
D S YASD FRM+ FK+R C+R+ SHDWT+CPF HP E ARRRDPR++ Y+ C +
Sbjct: 224 DIKSSVYASDEFRMFAFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKHPYTAVPCPNF 283
Query: 158 RRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRILPEIS 217
RR GGC GD CEF+HGVFE WLHPS+YRT CK+G C R++CFFAH +LR +P S
Sbjct: 284 RRPGGCPSGDSCEFSHGVFESWLHPSQYRTRLCKEGAACARRICFFAHDEDELRHVPHNS 343
Query: 218 SQYSSSPSS 226
SP +
Sbjct: 344 GAGLLSPRA 352
>sp|O65036|C3H54_ARATH Zinc finger CCCH domain-containing protein 54 OS=Arabidopsis
thaliana GN=PEI1 PE=1 SV=1
Length = 245
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 73/112 (65%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 100 DSDPYASDHFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRR 159
D Y SD FRMY +KI+RC R+RSHDWT+CP+AH EKA RRDPRRY Y C +R
Sbjct: 44 DDAIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVACPAFR- 102
Query: 160 GGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLR 211
G C GD CEFAHGVFE WLHP+RYRT AC G C+RKVCFFAH+P QLR
Sbjct: 103 NGACHRGDSCEFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLR 154
>sp|Q9XEE6|C3H29_ARATH Zinc finger CCCH domain-containing protein 29 OS=Arabidopsis
thaliana GN=At2g40140 PE=2 SV=1
Length = 597
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 174/374 (46%), Gaps = 65/374 (17%)
Query: 98 DPDSDPYASDHFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEY 157
D + Y +D FRM+ FK++ C+R+ SHDWT+CPF HP E ARRRDPR+Y Y+ C E+
Sbjct: 204 DINEGVYGTDDFRMFSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYTCVPCPEF 263
Query: 158 RRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRILPEIS 217
R+ G C GD CE+AHGVFE WLHP++YRT CKD C R+VCFFAH +LR + +
Sbjct: 264 RK-GSCPKGDSCEYAHGVFESWLHPAQYRTRLCKDETGCARRVCFFAHRRDELRPVNAST 322
Query: 218 SQYSSSPSSVNNNNQKISSHCCMYCHHHSVNSSPTSTLLGNMSHLSRSPSLSP-----PL 272
SP S N SP +++ ++ L SP SP PL
Sbjct: 323 GSAMVSP--------------------RSSNQSPEMSVMSPLT-LGSSPMNSPMANGVPL 361
Query: 273 SPVKHGLISPISRYSATTPVPAD--------RLSKFSNSSEMSMSYKDV----------- 313
SP GL +R ++ TP P LS EM + ++ +
Sbjct: 362 SPRNGGLWQ--NRVNSLTPPPLQLNGSRLKSTLSARDMDMEMELRFRGLDNRRLGDLKPS 419
Query: 314 -LNELMTSMDAISFNEVSSP-----MSLTPSNDVNACPWIDVSSFNVEDQQQFVLSPST- 366
L E S D+ S ++ SP M+ PS+ V P S S
Sbjct: 420 NLEETFGSYDSASVMQLQSPSRHSQMNHYPSSPVRQPPPHGFESSAAMAAAVMNARSSAF 479
Query: 367 --------PSPSAGSIMNPFA--AHHDYFSNKSFLDDDQKMINYHNHIHNNSNGSCQLAS 416
P+P A ++ + + ++ + L+ ++ ++ H +NN++ S
Sbjct: 480 AKRSLSFKPAPVASNVSDWGSPNGKLEWGMQRDELNKLRRSASFGIHGNNNNSVSRPARD 539
Query: 417 DTPDPDLGWVNELL 430
+ +PD+ WVN L+
Sbjct: 540 YSDEPDVSWVNSLV 553
>sp|Q65X92|C3H37_ORYSJ Zinc finger CCCH domain-containing protein 37 OS=Oryza sativa
subsp. japonica GN=Os05g0525900 PE=2 SV=1
Length = 255
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 107/172 (62%), Gaps = 5/172 (2%)
Query: 58 PRSGSGSGSDSASYLFYPDQQEMNILHNKFLPFNNTDADSDPDSDPYASDHFRMYEFKIR 117
P + + S +D A+ P E+ ++L +D +++ D++ A D F MYEFK+R
Sbjct: 11 PAALAVSWADPAAVEIPP---ELLAALGEYLSARRSDGEAEADAEAEADDEFMMYEFKVR 67
Query: 118 RCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRR--GGGCSLGDDCEFAHGV 175
RC R+RSHDWT CP+AHP E ARRRDPRR Y+G C ++RR G C G C FAHG
Sbjct: 68 RCARARSHDWTACPYAHPGEAARRRDPRRVAYTGEPCPDFRRRPGAACPRGSTCPFAHGT 127
Query: 176 FECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRILPEISSQYSSSPSSV 227
FE WLHPSRYRT C+ G C+R+VCFFAH+ +LR + S S SP S
Sbjct: 128 FELWLHPSRYRTRPCRAGVACRRRVCFFAHTAGELRAGSKEDSPLSLSPKST 179
>sp|Q93ZS9|C3H47_ARATH Zinc finger CCCH domain-containing protein 47 OS=Arabidopsis
thaliana GN=At3g55980 PE=2 SV=1
Length = 580
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 109/185 (58%), Gaps = 30/185 (16%)
Query: 98 DPDSDPYASDHFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEY 157
D + Y SD FRMY FK++ C+R+ SHDWT+C F HP E ARRRDPR+Y Y+ C E+
Sbjct: 201 DINEGVYGSDEFRMYSFKVKPCSRAYSHDWTECAFVHPGENARRRDPRKYPYTCVPCPEF 260
Query: 158 RRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRILPEIS 217
R+ G C GD CE+AHGVFE WLHP++Y+T CKD C RKVCFFAH ++R P +
Sbjct: 261 RK-GSCPKGDSCEYAHGVFESWLHPAQYKTRLCKDETGCARKVCFFAHKREEMR--PVNA 317
Query: 218 SQYSSSPSSVNNNNQKISSHCCMYCHHHSVNSSPTSTL--LGNMSHLSRSPSLS-PPLSP 274
S S +V SP S+L + +S L+ S +S PP+SP
Sbjct: 318 STGS------------------------AVAQSPFSSLEMMPGLSPLAYSSGVSTPPVSP 353
Query: 275 VKHGL 279
+ +G+
Sbjct: 354 MANGV 358
>sp|Q94JI5|C3H10_ORYSJ Zinc finger CCCH domain-containing protein 10 OS=Oryza sativa
subsp. japonica GN=Os01g0738400 PE=2 SV=1
Length = 225
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
Query: 107 DHFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGG--GCS 164
+ F MYEFK+RRC RSR+H+WT CP+AHP E ARRRDP Y+G C ++R C
Sbjct: 43 EDFMMYEFKVRRCPRSRAHEWTSCPYAHPGEAARRRDPSHVTYTGEPCPDFRVAARAACP 102
Query: 165 LGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRILPEISSQYSSSP 224
G C FAHG FE WLHPSRYRT C+ G C R VCFFAH+ ++LRI+ + ++ + SP
Sbjct: 103 RGSGCPFAHGTFETWLHPSRYRTRPCRSGMLCARPVCFFAHNDKELRIVGDDAAAATPSP 162
Query: 225 SS 226
S
Sbjct: 163 RS 164
>sp|Q86B79|UNK_DROME RING finger protein unkempt OS=Drosophila melanogaster GN=unk PE=1
SV=1
Length = 599
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 64/150 (42%), Gaps = 21/150 (14%)
Query: 76 DQQEMNILHNKFLPFNNTDADSDPD-------SDPYASD-HFRMYEFKIRRCTR--SRSH 125
D +E+ L N ++T+A + D DP D ++ + +K C R
Sbjct: 149 DIKELETLQNAESTLDSTNALNALDKERNLMNEDPKWQDTNYVLANYKTEPCKRPPRLCR 208
Query: 126 DWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRG------GGCSLGDDCEFAHGVFECW 179
CP H S K +RR PR+Y Y C + G G C GD+C++ H E
Sbjct: 209 QGYACPQYHNS-KDKRRSPRKYKYRSTPCPNVKHGEEWGEPGNCEAGDNCQYCHTRTEQQ 267
Query: 180 LHPSRYRTEACKDGKN---CKRKV-CFFAH 205
HP Y++ C D + C R V C FAH
Sbjct: 268 FHPEIYKSTKCNDVQQAGYCPRSVFCAFAH 297
>sp|Q8BL48|UNK_MOUSE RING finger protein unkempt homolog OS=Mus musculus GN=Unk PE=1
SV=1
Length = 810
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 130 CPFAHPSEKARRRDPRRYHYSGAVCSEYRRG------GGCSLGDDCEFAHGVFECWLHPS 183
CP+ H S K RRR PR++ Y + C + G G C GD C++ H E HP
Sbjct: 234 CPYYHNS-KDRRRSPRKHKYRSSPCPNVKHGDEWGDPGKCENGDACQYCHTRTEQQFHPE 292
Query: 184 RYRTEACKD---GKNCKRK-VCFFAH 205
Y++ C D +C R C FAH
Sbjct: 293 IYKSTKCNDMQQAGSCPRGPFCAFAH 318
Score = 32.7 bits (73), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 147 YHYSGAV-CSEYRRGGG-CSLGDDCEFAH---GVFECWLHPSRYRTEAC---KDGK-NCK 197
++YS V C++Y G C GD+C F H G E H Y+T C D K NC
Sbjct: 82 FNYSPDVYCTKYDEATGLCPEGDECPFLHRTTGDTERRYHLRYYKTGICIHETDSKGNCT 141
Query: 198 RKV--CFFAHSPRQLR 211
+ C FAH P LR
Sbjct: 142 KNGLHCAFAHGPHDLR 157
>sp|Q6EE22|UNK_CANFA RING finger protein unkempt homolog OS=Canis familiaris GN=UNK PE=2
SV=1
Length = 810
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 130 CPFAHPSEKARRRDPRRYHYSGAVCSEYRRG------GGCSLGDDCEFAHGVFECWLHPS 183
CP+ H S K RRR PR++ Y + C + G G C GD C++ H E HP
Sbjct: 234 CPYYHNS-KDRRRSPRKHKYRSSPCPNVKHGDEWGDPGKCENGDACQYCHTRTEQQFHPE 292
Query: 184 RYRTEACKDGKN---CKRK-VCFFAH 205
Y++ C D + C R C FAH
Sbjct: 293 IYKSTKCNDMQQSGSCPRGPFCAFAH 318
Score = 32.7 bits (73), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 147 YHYSGAV-CSEYRRGGG-CSLGDDCEFAH---GVFECWLHPSRYRTEAC---KDGK-NCK 197
++YS V C++Y G C GD+C F H G E H Y+T C D K NC
Sbjct: 82 FNYSPDVYCTKYDEATGLCPEGDECPFLHRTTGDTERRYHLRYYKTGICIHETDSKGNCT 141
Query: 198 RKV--CFFAHSPRQLR 211
+ C FAH P LR
Sbjct: 142 KNGLHCAFAHGPHDLR 157
>sp|Q9C0B0|UNK_HUMAN RING finger protein unkempt homolog OS=Homo sapiens GN=UNK PE=1
SV=2
Length = 810
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 130 CPFAHPSEKARRRDPRRYHYSGAVCSEYRRG------GGCSLGDDCEFAHGVFECWLHPS 183
CP+ H S K RRR PR++ Y + C + G G C GD C++ H E HP
Sbjct: 234 CPYYHNS-KDRRRSPRKHKYRSSPCPNVKHGDEWGDPGKCENGDACQYCHTRTEQQFHPE 292
Query: 184 RYRTEACKDGKN---CKRK-VCFFAH 205
Y++ C D + C R C FAH
Sbjct: 293 IYKSTKCNDMQQSGSCPRGPFCAFAH 318
Score = 32.7 bits (73), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 147 YHYSGAV-CSEYRRGGG-CSLGDDCEFAH---GVFECWLHPSRYRTEAC---KDGK-NCK 197
++YS V C++Y G C GD+C F H G E H Y+T C D K NC
Sbjct: 82 FNYSPDVYCTKYDEATGLCPEGDECPFLHRTTGDTERRYHLRYYKTGICIHETDSKGNCT 141
Query: 198 RKV--CFFAHSPRQLR 211
+ C FAH P LR
Sbjct: 142 KNGLHCAFAHGPHDLR 157
>sp|Q9C9N3|C3H14_ARATH Zinc finger CCCH domain-containing protein 14 OS=Arabidopsis
thaliana GN=At1g66810 PE=2 SV=1
Length = 310
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 153 VCSEYRRGGGCSLGDDCEFAHGVFE---CWLHPSRYRTEACK 191
+C++++ G C GD+C+FAHG+ E HP RY+TE C+
Sbjct: 237 LCNKWQETGACCYGDNCQFAHGIDELRPVIRHP-RYKTEVCR 277
>sp|Q9C9F5|C3H15_ARATH Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis
thaliana GN=At1g68200 PE=2 SV=1
Length = 308
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 153 VCSEYRRGGGCSLGDDCEFAHGVFE---CWLHPSRYRTEACK---DGKNCKRK-VCFFAH 205
+C++++ G C GD C+FAHG+ E HP RY+TE C+ G NC C F H
Sbjct: 227 LCNKWQETGTCPYGDHCQFAHGIKELRPVIRHP-RYKTEVCRMVLAGDNCPYGHRCHFRH 285
Query: 206 S 206
S
Sbjct: 286 S 286
>sp|Q7XSB2|C3H29_ORYSJ Putative zinc finger CCCH domain-containing protein 29 OS=Oryza
sativa subsp. japonica GN=Os04g0487500 PE=4 SV=2
Length = 146
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 143 DPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFE 177
D R Y SG C ++R+GG C+ GD CEFAHGVF+
Sbjct: 106 DTRPYCDSGTACLDFRKGG-CNHGDACEFAHGVFD 139
>sp|Q8L7S3|C3H24_ARATH Zinc finger CCCH domain-containing protein 24 OS=Arabidopsis
thaliana GN=At2g28450 PE=2 SV=1
Length = 809
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 12/112 (10%)
Query: 88 LPFNNTDADSDPDSDPYASDHFRMYEFKIRRCTRSRSHDW--TDCPFAHPSEKARRRDPR 145
+P + D P SD A+D+ K +R + +D PS
Sbjct: 27 IPMETSSIDELPSSDSNATDNIEAVGEKRKRADEDEKTNLESSDTKITTPSP-------- 78
Query: 146 RYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCK 197
+ ++CS +RR CS G++C++AHG E + P + GK K
Sbjct: 79 --WWKTSLCSYFRREASCSHGNECKYAHGEAELRMKPDNTWDPTSERGKKAK 128
>sp|P23950|TISB_MOUSE Zinc finger protein 36, C3H1 type-like 1 OS=Mus musculus GN=Zfp36l1
PE=1 SV=1
Length = 338
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 148 HYSGAVCSEYRRGGGCSLGDDCEFAHGVFE---CWLHPSRYRTEACKD----GKNCKRKV 200
Y +C + G C GD C+FAHG+ E HP +Y+TE C+ G
Sbjct: 114 RYKTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHP-KYKTELCRTFHTIGFCPYGPR 172
Query: 201 CFFAHSPRQLRIL 213
C F H+ + R L
Sbjct: 173 CHFIHNAEERRAL 185
>sp|P17431|TISB_RAT Zinc finger protein 36, C3H1 type-like 1 OS=Rattus norvegicus
GN=Zfp36l1 PE=1 SV=1
Length = 338
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 148 HYSGAVCSEYRRGGGCSLGDDCEFAHGVFE---CWLHPSRYRTEACKD----GKNCKRKV 200
Y +C + G C GD C+FAHG+ E HP +Y+TE C+ G
Sbjct: 114 RYKTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHP-KYKTELCRTFHTIGFCPYGPR 172
Query: 201 CFFAHSPRQLRIL 213
C F H+ + R L
Sbjct: 173 CHFIHNAEERRAL 185
>sp|Q07352|TISB_HUMAN Zinc finger protein 36, C3H1 type-like 1 OS=Homo sapiens GN=ZFP36L1
PE=1 SV=1
Length = 338
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 148 HYSGAVCSEYRRGGGCSLGDDCEFAHGVFE---CWLHPSRYRTEACK 191
Y +C + G C GD C+FAHG+ E HP +Y+TE C+
Sbjct: 114 RYKTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHP-KYKTELCR 159
>sp|Q6L5G1|C3H39_ORYSJ Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa
subsp. japonica GN=Os05g0576300 PE=2 SV=1
Length = 343
Score = 40.0 bits (92), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 149 YSGAVCSEYRRGGGCSLGDDCEFAHGVFE---CWLHPSRYRTEACK 191
+ +C+++ G C GD C+FAHGV E HP RY+T+ C+
Sbjct: 269 FKTELCNKWEETGACPYGDQCQFAHGVAELRPVIRHP-RYKTQVCR 313
>sp|A2ZVY5|C3H9_ORYSJ Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp.
japonica GN=Os01g0645000 PE=2 SV=1
Length = 333
Score = 39.7 bits (91), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 149 YSGAVCSEYRRGGGCSLGDDCEFAHGVFE---CWLHPSRYRTEACK 191
+ +C+++ G C GD C+FAHGV E HP RY+T C+
Sbjct: 259 FKTELCNKWEETGDCPYGDQCQFAHGVTELRPVIRHP-RYKTAVCR 303
>sp|P47977|CTH2_YEAST mRNA decay factor CTH2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=TIS11 PE=1 SV=1
Length = 285
Score = 39.7 bits (91), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 133 AHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPS--RYRTEAC 190
A P K++ ++ + Y +C + G C G C+FAHG+ E + S +RT+ C
Sbjct: 154 AQPKVKSQVQETPKQLYKTELCESFTLKGSCPYGSKCQFAHGLGELKVKKSCKNFRTKPC 213
Query: 191 KDGKNC-----KRKVCF 202
+ + R+ CF
Sbjct: 214 VNWEKLGYCPYGRRCCF 230
>sp|Q7ZXW9|TISDA_XENLA Zinc finger protein 36, C3H1 type-like 2-A OS=Xenopus laevis
GN=zfp36l2-A PE=2 SV=1
Length = 363
Score = 39.7 bits (91), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 149 YSGAVCSEYRRGGGCSLGDDCEFAHGVFE---CWLHPSRYRTEACK 191
Y +C + G C G+ C+FAHG E HP +Y+TE C+
Sbjct: 132 YKTELCRPFEESGACKYGEKCQFAHGFHELRSLTRHP-KYKTELCR 176
>sp|Q805B4|TISDB_XENLA Zinc finger protein 36, C3H1 type-like 2-B OS=Xenopus laevis
GN=zfp36l2-B PE=2 SV=1
Length = 364
Score = 39.3 bits (90), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 149 YSGAVCSEYRRGGGCSLGDDCEFAHGVFE---CWLHPSRYRTEACK 191
Y +C + G C G+ C+FAHG E HP +Y+TE C+
Sbjct: 134 YKTELCRPFEENGACKYGEKCQFAHGFHELRSLTRHP-KYKTELCR 178
>sp|F2Z3T4|MBNL2_RAT Muscleblind-like protein 2 OS=Rattus norvegicus GN=Mbnl2 PE=1 SV=1
Length = 373
Score = 39.3 bits (90), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 27/152 (17%)
Query: 153 VCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDG--KNCKRKVCFFAHSPRQL 210
VC +Y+RG ++C+FAH C + R AC D C R+ C + H P L
Sbjct: 18 VCRQYQRGTCSRSDEECKFAHPPKSCQVE--NGRVIACFDSLKGRCSRENCKYLHPPTHL 75
Query: 211 RILPEISSQYSSSPSSVNNNNQKISSHCCMYCHH----------HSVNSSPTSTLLGNMS 260
+ EI+ + NN + + M H V + P +G +
Sbjct: 76 KTQLEINGR---------NNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGPTIGTNA 126
Query: 261 HLSRSPSLSPPLSPVKHGLISPISRYSATTPV 292
+ S +P L+PV G+ + TTPV
Sbjct: 127 AI----SFAPYLAPVTPGVGLVPTEVLPTTPV 154
Score = 33.1 bits (74), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 153 VCSEYRRGGGCSLGD-DCEFAHGVFECWLHPSRYRTEACKD--GKNCKRKVCFFAHSPRQ 209
VC E++R G C+ G+ DC FAH + + C D C R+ C + H P
Sbjct: 181 VCREFQR-GNCARGETDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCMREKCKYFHPPAH 239
Query: 210 LR 211
L+
Sbjct: 240 LQ 241
>sp|Q8C181|MBNL2_MOUSE Muscleblind-like protein 2 OS=Mus musculus GN=Mbnl2 PE=2 SV=2
Length = 373
Score = 39.3 bits (90), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 27/152 (17%)
Query: 153 VCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDG--KNCKRKVCFFAHSPRQL 210
VC +Y+RG ++C+FAH C + R AC D C R+ C + H P L
Sbjct: 18 VCRQYQRGTCSRSDEECKFAHPPKSCQVE--NGRVIACFDSLKGRCSRENCKYLHPPTHL 75
Query: 211 RILPEISSQYSSSPSSVNNNNQKISSHCCMYCHH----------HSVNSSPTSTLLGNMS 260
+ EI+ + NN + + M H V + P +G +
Sbjct: 76 KTQLEINGR---------NNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGPTIGTNA 126
Query: 261 HLSRSPSLSPPLSPVKHGLISPISRYSATTPV 292
+ S +P L+PV G+ + TTPV
Sbjct: 127 AI----SFAPYLAPVTPGVGLVPTEVLPTTPV 154
Score = 33.1 bits (74), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 153 VCSEYRRGGGCSLGD-DCEFAHGVFECWLHPSRYRTEACKD--GKNCKRKVCFFAHSPRQ 209
VC E++R G C+ G+ DC FAH + + C D C R+ C + H P
Sbjct: 181 VCREFQR-GNCARGETDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCMREKCKYFHPPAH 239
Query: 210 LR 211
L+
Sbjct: 240 LQ 241
>sp|A4IIN5|TISD_XENTR Zinc finger protein 36, C3H1 type-like 2 OS=Xenopus tropicalis
GN=zfp36l2 PE=2 SV=1
Length = 333
Score = 39.3 bits (90), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 149 YSGAVCSEYRRGGGCSLGDDCEFAHGVFE---CWLHPSRYRTEACK 191
Y +C + G C G+ C+FAHG E HP +Y+TE C+
Sbjct: 102 YKTELCRPFEESGACKYGEKCQFAHGFHELRSLTRHP-KYKTELCR 146
>sp|Q9NUK0|MBNL3_HUMAN Muscleblind-like protein 3 OS=Homo sapiens GN=MBNL3 PE=2 SV=2
Length = 354
Score = 38.9 bits (89), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 153 VCSEYRRGGGCSLGD-DCEFAHGVFECWLHPSRYRTEACKDG--KNCKRKVCFFAHSPRQ 209
VC E++RG CS D DC+FAH C H R AC D C R+ C + H P
Sbjct: 19 VCREFQRGT-CSRADADCKFAHPPRVC--HVENGRVVACFDSLKGRCTRENCKYLHPPPH 75
Query: 210 LRILPEISSQ 219
L+ EI+ +
Sbjct: 76 LKTQLEINGR 85
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 153 VCSEYRRGGGCSLGD-DCEFAHGVFECWLHPSRYRTEACKD--GKNCKRKVCFFAHSPRQ 209
VC E++R G C+ G+ DC +AH + S C D C R+ C + H P
Sbjct: 179 VCREFQR-GNCTRGENDCRYAHPTDASMIEASDNTVTICMDYIKGRCSREKCKYFHPPAH 237
Query: 210 LR 211
L+
Sbjct: 238 LQ 239
>sp|Q6Q2B2|MBN2A_TAKRU Muscleblind-like protein 2a OS=Takifugu rubripes GN=mbnl2a PE=2
SV=1
Length = 351
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
Query: 153 VCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDG--KNCKRKVCFFAHSPRQL 210
VC +++RG ++C+FAH C + R AC D C R+ C + H P L
Sbjct: 18 VCRQFQRGTCSRSDEECKFAHPPKSCQVE--NGRVIACFDSLKGRCTRENCKYLHPPAHL 75
Query: 211 RILPEISS-----QYSSSPSSVNNNNQKISSHCCMYCHHHSVNSSPTSTLLGNMSHLSRS 265
+ EI+ Q ++ + + Q + M V + P + LG+ + LS +
Sbjct: 76 KTQLEINGRNNLIQQKTAAAMLAQQMQFMIPSTTM----QHVQTFPVNQGLGSSAGLSYT 131
Query: 266 PSLSP 270
P L+P
Sbjct: 132 PYLTP 136
Score = 32.3 bits (72), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 153 VCSEYRRGGGCSLGD-DCEFAHGVFECWLHPSRYRTEACKD--GKNCKRKVCFFAHSPRQ 209
VC E++R G C+ G+ DC FAH + S C D C R+ C + H P
Sbjct: 182 VCREFQR-GNCARGETDCRFAHPSDSPMIDTSDNTVTVCMDYIKSRCSREKCKYFHPPAH 240
Query: 210 LR 211
L+
Sbjct: 241 LQ 242
>sp|A3BUD2|C3H57_ORYSJ Putative zinc finger CCCH domain-containing protein 57 OS=Oryza
sativa subsp. japonica GN=Os08g0491700 PE=4 SV=1
Length = 605
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 10/64 (15%)
Query: 138 KARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSR--YRTEACK---D 192
K + R+P+ +C ++ R G CS GD CE+AH E + +R YRTE C+
Sbjct: 514 KQKMREPKT-----VMCPDWCRTGHCSSGDGCEYAHSQDELRVIDARPKYRTEPCRYWLA 568
Query: 193 GKNC 196
GK C
Sbjct: 569 GKGC 572
>sp|P22893|TTP_MOUSE Tristetraprolin OS=Mus musculus GN=Zfp36 PE=1 SV=1
Length = 319
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 148 HYSGAVCSEYRRGGGCSLGDDCEFAHGVFECW---LHPSRYRTEAC----KDGKNCKRKV 200
Y +C Y G C G C+FAHG+ E HP +Y+TE C G+
Sbjct: 95 RYKTELCRTYSESGRCRYGAKCQFAHGLGELRQANRHP-KYKTELCHKFYLQGRCPYGSR 153
Query: 201 CFFAHSPRQLRILP 214
C F H+P + LP
Sbjct: 154 CHFIHNPTEDLALP 167
>sp|P47980|TIS1_DROME Protein TIS11 OS=Drosophila melanogaster GN=Tis11 PE=2 SV=2
Length = 436
Score = 37.0 bits (84), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 149 YSGAVCSEYRRGGGCSLGDDCEFAHGVFECW---LHPSRYRTEACKDGKNCKRKVCFFAH 205
Y +C + G C G+ C+FAHG E HP +Y+TE C+ V F +
Sbjct: 136 YKTELCRPFEEAGECKYGEKCQFAHGSHELRNVHRHP-KYKTEYCR----TFHSVGFCPY 190
Query: 206 SPR 208
PR
Sbjct: 191 GPR 193
>sp|O55741|132L_IIV6 Putative zinc finger protein 132L OS=Invertebrate iridescent virus
6 GN=IIV6-132L PE=4 SV=1
Length = 239
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 119 CTRSRSHDWTDCPFAHPSEKARRR-DPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFE 177
C +DC F HP EK + P+ +Y + C+ G +C FAH E
Sbjct: 50 CKYEEECKRSDCVFLHPGEKMPEKPKPKETERRKTRMCKYVKK--CNKGKNCPFAHDESE 107
Query: 178 CWLHPSRYRTEACKDGKNCKRKVCFFAH 205
++ RY + K GK+ + C F+H
Sbjct: 108 IYIPECRYGYKCKKQGKDNEPGECKFSH 135
>sp|Q5R4F5|MBNL2_PONAB Muscleblind-like protein 2 OS=Pongo abelii GN=MBNL2 PE=2 SV=2
Length = 373
Score = 36.2 bits (82), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 17/147 (11%)
Query: 153 VCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDG--KNCKRKVCFFAHSPRQL 210
VC +++RG ++C+FAH C + R AC D C R+ C + H P L
Sbjct: 18 VCRQFQRGTCSRSDEECKFAHPPKSCQVE--NGRVIACFDSLKGRCSRENCKYLHPPTHL 75
Query: 211 RILPEISS-----QYSSSPSSVNNNNQKISSHCCMYCHHHSVNSSPTSTLLGNMSHLSRS 265
+ EI+ Q ++ + + Q + + H V + P +G + +
Sbjct: 76 KTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPL----HPVPTFPVGPAIGTNTAI--- 128
Query: 266 PSLSPPLSPVKHGLISPISRYSATTPV 292
S +P L+PV G+ + TTPV
Sbjct: 129 -SFAPYLAPVTPGVGLVPTEILPTTPV 154
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 153 VCSEYRRGGGCSLGD-DCEFAHGVFECWLHPSRYRTEACKD--GKNCKRKVCFFAHSPRQ 209
VC E++R G C+ G+ DC FAH + S C D C R+ C + H P
Sbjct: 181 VCREFQR-GNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAH 239
Query: 210 LR 211
L+
Sbjct: 240 LQ 241
>sp|Q5VZF2|MBNL2_HUMAN Muscleblind-like protein 2 OS=Homo sapiens GN=MBNL2 PE=1 SV=2
Length = 373
Score = 36.2 bits (82), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 17/147 (11%)
Query: 153 VCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDG--KNCKRKVCFFAHSPRQL 210
VC +++RG ++C+FAH C + R AC D C R+ C + H P L
Sbjct: 18 VCRQFQRGTCSRSDEECKFAHPPKSCQVE--NGRVIACFDSLKGRCSRENCKYLHPPTHL 75
Query: 211 RILPEISS-----QYSSSPSSVNNNNQKISSHCCMYCHHHSVNSSPTSTLLGNMSHLSRS 265
+ EI+ Q ++ + + Q + + H V + P +G + +
Sbjct: 76 KTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPL----HPVPTFPVGPAIGTNTAI--- 128
Query: 266 PSLSPPLSPVKHGLISPISRYSATTPV 292
S +P L+PV G+ + TTPV
Sbjct: 129 -SFAPYLAPVTPGVGLVPTEILPTTPV 154
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 153 VCSEYRRGGGCSLGD-DCEFAHGVFECWLHPSRYRTEACKD--GKNCKRKVCFFAHSPRQ 209
VC E++R G C+ G+ DC FAH + S C D C R+ C + H P
Sbjct: 181 VCREFQR-GNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAH 239
Query: 210 LR 211
L+
Sbjct: 240 LQ 241
>sp|Q56V19|MBNL3_TAKRU Muscleblind-like protein 3 OS=Takifugu rubripes GN=mbnl3 PE=2 SV=1
Length = 323
Score = 35.8 bits (81), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 153 VCSEYRRGGGCSLGD-DCEFAHGVFECWLHPSRYRTEACKDG--KNCKRKVCFFAHSPRQ 209
VC E++RG CS D +C+FAH C H R AC D C R+ C + H P
Sbjct: 18 VCREFQRGT-CSRSDAECKFAHPSRSC--HVENGRVIACFDSLKGRCTRENCKYLHPPPH 74
Query: 210 LRILPEISSQ 219
L+ EI+ +
Sbjct: 75 LKTQLEINGR 84
>sp|P47973|TTP_RAT Tristetraprolin OS=Rattus norvegicus GN=Zfp36 PE=2 SV=1
Length = 320
Score = 35.8 bits (81), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Query: 148 HYSGAVCSEYRRGGGCSLGDDCEFAHGVFECW---LHPSRYRTEAC----KDGKNCKRKV 200
Y +C Y G C G C+FAHG E HP +Y+TE C G+
Sbjct: 96 RYKTELCRTYSESGRCRYGAKCQFAHGPGELRQANRHP-KYKTELCHKFYLQGRCPYGSR 154
Query: 201 CFFAHSPRQLRILP 214
C F H+P + LP
Sbjct: 155 CHFIHNPTEDLALP 168
>sp|Q5FWH2|UNKL_MOUSE Putative E3 ubiquitin-protein ligase UNKL OS=Mus musculus GN=Unkl
PE=2 SV=2
Length = 727
Score = 35.8 bits (81), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 163 CSLGDDCEFAHGVFECWLHPSRYRTEACKDGKN---CKRK-VCFFAHSPRQLRILPEIS 217
C GD C++ H E HP Y++ C D + C R C FAH+ + L ++ E S
Sbjct: 264 CDGGDSCQYCHSRTEQQFHPEIYKSTKCNDMRQTGYCPRGPFCAFAHTEKSLAMVNEWS 322
>sp|P47974|TISD_HUMAN Zinc finger protein 36, C3H1 type-like 2 OS=Homo sapiens GN=ZFP36L2
PE=1 SV=3
Length = 494
Score = 35.4 bits (80), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 149 YSGAVCSEYRRGGGCSLGDDCEFAHGVFE---CWLHPSRYRTEACK 191
Y +C + G C G+ C+FAHG E HP +Y+TE C+
Sbjct: 154 YKTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHP-KYKTELCR 198
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.129 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 173,858,920
Number of Sequences: 539616
Number of extensions: 7713279
Number of successful extensions: 40927
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 198
Number of HSP's that attempted gapping in prelim test: 34313
Number of HSP's gapped (non-prelim): 4093
length of query: 431
length of database: 191,569,459
effective HSP length: 120
effective length of query: 311
effective length of database: 126,815,539
effective search space: 39439632629
effective search space used: 39439632629
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)