Query 036440
Match_columns 181
No_of_seqs 153 out of 1087
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 21:58:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036440.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036440hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 2.3E-31 7.9E-36 231.0 14.5 139 1-181 156-345 (353)
2 3p9c_A Caffeic acid O-methyltr 99.9 2.8E-26 9.4E-31 199.8 14.9 140 1-181 177-364 (364)
3 3reo_A (ISO)eugenol O-methyltr 99.9 1.5E-25 5E-30 195.2 14.3 140 1-181 179-366 (368)
4 3lst_A CALO1 methyltransferase 99.9 2.8E-23 9.6E-28 178.3 14.7 139 1-181 161-347 (348)
5 3gwz_A MMCR; methyltransferase 99.9 3.8E-23 1.3E-27 179.4 13.9 139 1-181 179-368 (369)
6 1zg3_A Isoflavanone 4'-O-methy 99.9 4.5E-23 1.6E-27 177.3 14.1 140 1-181 169-358 (358)
7 3i53_A O-methyltransferase; CO 99.9 4.3E-23 1.5E-27 175.1 12.5 138 1-181 146-331 (332)
8 1fp2_A Isoflavone O-methyltran 99.9 2.6E-22 8.7E-27 172.3 13.8 140 1-181 164-352 (352)
9 2ip2_A Probable phenazine-spec 99.9 1.3E-21 4.4E-26 165.5 14.2 137 1-181 146-333 (334)
10 1fp1_D Isoliquiritigenin 2'-O- 99.9 1.2E-21 4E-26 169.6 13.0 140 1-181 185-372 (372)
11 3dp7_A SAM-dependent methyltra 99.8 1.1E-20 3.9E-25 163.5 12.2 126 15-181 169-354 (363)
12 1x19_A CRTF-related protein; m 99.8 5.4E-19 1.8E-23 151.7 13.8 138 1-181 166-358 (359)
13 3mcz_A O-methyltransferase; ad 99.8 4.6E-19 1.6E-23 150.8 12.0 136 1-181 156-348 (352)
14 1tw3_A COMT, carminomycin 4-O- 99.8 6.6E-19 2.3E-23 150.3 12.6 139 1-181 160-355 (360)
15 1qzz_A RDMB, aclacinomycin-10- 99.8 1.5E-18 5.2E-23 148.4 13.1 139 1-181 159-355 (374)
16 2r3s_A Uncharacterized protein 99.8 6.4E-18 2.2E-22 141.9 13.1 138 1-180 140-333 (335)
17 3dtn_A Putative methyltransfer 99.1 7.4E-10 2.5E-14 87.9 12.3 112 27-177 44-221 (234)
18 4gek_A TRNA (CMO5U34)-methyltr 99.1 1.6E-09 5.5E-14 90.6 13.3 114 25-177 68-253 (261)
19 1ve3_A Hypothetical protein PH 99.0 1.2E-09 4.1E-14 85.6 10.4 115 26-181 37-226 (227)
20 3dh0_A SAM dependent methyltra 98.9 2.2E-08 7.6E-13 78.3 12.2 122 15-179 27-190 (219)
21 3ou2_A SAM-dependent methyltra 98.8 9.7E-08 3.3E-12 74.0 13.1 113 15-168 35-203 (218)
22 1xtp_A LMAJ004091AAA; SGPP, st 98.8 2.8E-08 9.6E-13 79.2 9.9 109 25-173 91-241 (254)
23 3pfg_A N-methyltransferase; N, 98.8 1E-07 3.4E-12 77.1 13.0 117 25-180 48-247 (263)
24 3hnr_A Probable methyltransfer 98.8 1.3E-07 4.6E-12 73.9 13.4 123 16-180 36-210 (220)
25 3ujc_A Phosphoethanolamine N-m 98.8 5.3E-08 1.8E-12 77.7 11.0 106 25-170 53-206 (266)
26 3lcc_A Putative methyl chlorid 98.8 3.3E-08 1.1E-12 78.7 9.7 105 29-172 68-209 (235)
27 3dlc_A Putative S-adenosyl-L-m 98.8 1.4E-08 4.9E-13 78.4 6.9 103 30-173 46-206 (219)
28 2qe6_A Uncharacterized protein 98.7 5.4E-08 1.8E-12 81.6 10.7 99 27-166 77-238 (274)
29 3g2m_A PCZA361.24; SAM-depende 98.7 1.4E-07 4.7E-12 78.2 12.2 115 28-181 83-291 (299)
30 3ocj_A Putative exported prote 98.7 1.7E-07 5.9E-12 78.2 12.0 107 25-170 116-291 (305)
31 1vl5_A Unknown conserved prote 98.7 1.7E-07 5.9E-12 75.6 11.1 111 15-170 27-190 (260)
32 3h2b_A SAM-dependent methyltra 98.7 9.4E-08 3.2E-12 74.1 9.0 107 28-173 42-185 (203)
33 1xxl_A YCGJ protein; structura 98.7 2.1E-07 7.1E-12 74.7 11.1 118 8-170 4-174 (239)
34 3g5l_A Putative S-adenosylmeth 98.7 7.8E-08 2.7E-12 77.2 8.5 102 27-170 44-216 (253)
35 3e23_A Uncharacterized protein 98.6 9.1E-08 3.1E-12 74.8 7.8 107 25-170 41-182 (211)
36 2o57_A Putative sarcosine dime 98.6 2.2E-07 7.4E-12 76.4 10.3 104 25-170 80-234 (297)
37 3dli_A Methyltransferase; PSI- 98.6 2.2E-07 7.5E-12 74.3 10.0 106 25-171 39-185 (240)
38 3mgg_A Methyltransferase; NYSG 98.6 1.3E-07 4.4E-12 76.8 8.4 105 25-170 35-198 (276)
39 1kpg_A CFA synthase;, cyclopro 98.6 4.6E-07 1.6E-11 74.1 11.5 106 24-170 61-228 (287)
40 2ex4_A Adrenal gland protein A 98.6 4.3E-07 1.5E-11 72.6 10.7 106 28-173 80-228 (241)
41 3vc1_A Geranyl diphosphate 2-C 98.6 2.8E-07 9.6E-12 77.1 9.7 104 25-170 115-269 (312)
42 3g07_A 7SK snRNA methylphospha 98.5 1E-07 3.5E-12 79.7 6.6 54 117-170 182-269 (292)
43 3bxo_A N,N-dimethyltransferase 98.5 7.7E-07 2.6E-11 70.0 11.2 115 26-181 39-238 (239)
44 3sm3_A SAM-dependent methyltra 98.5 1.8E-06 6.2E-11 67.3 13.1 105 25-168 28-205 (235)
45 3jwg_A HEN1, methyltransferase 98.5 8.9E-07 3E-11 69.5 11.1 110 16-166 20-188 (219)
46 3bus_A REBM, methyltransferase 98.5 1E-06 3.5E-11 71.2 11.5 112 15-170 51-216 (273)
47 2p7i_A Hypothetical protein; p 98.5 1.1E-06 3.7E-11 68.9 11.2 102 26-170 41-199 (250)
48 3f4k_A Putative methyltransfer 98.5 6.3E-07 2.2E-11 71.6 10.0 104 25-171 44-197 (257)
49 3jwh_A HEN1; methyltransferase 98.5 2.1E-06 7.1E-11 67.4 12.7 111 16-167 20-189 (217)
50 3l8d_A Methyltransferase; stru 98.5 1.4E-06 4.6E-11 68.9 11.5 105 25-170 51-200 (242)
51 3i9f_A Putative type 11 methyl 98.5 3.7E-07 1.3E-11 68.8 7.7 116 15-179 7-157 (170)
52 3cgg_A SAM-dependent methyltra 98.5 2.3E-06 7.8E-11 64.6 11.9 106 25-170 44-175 (195)
53 3kkz_A Uncharacterized protein 98.5 8.3E-07 2.8E-11 72.0 9.8 105 25-171 44-197 (267)
54 1nkv_A Hypothetical protein YJ 98.5 7.9E-07 2.7E-11 71.0 9.6 111 15-169 26-186 (256)
55 3ege_A Putative methyltransfer 98.5 1.3E-06 4.6E-11 71.0 11.0 111 15-170 24-178 (261)
56 4fsd_A Arsenic methyltransfera 98.4 8.7E-07 3E-11 77.0 10.1 102 27-169 83-250 (383)
57 3e8s_A Putative SAM dependent 98.4 1.2E-06 3.9E-11 67.9 9.8 109 16-169 43-208 (227)
58 3bkw_A MLL3908 protein, S-aden 98.4 3.1E-06 1.1E-10 66.7 11.9 111 17-170 35-214 (243)
59 3grz_A L11 mtase, ribosomal pr 98.4 1.1E-06 3.7E-11 68.5 8.8 123 15-181 48-196 (205)
60 3hem_A Cyclopropane-fatty-acyl 98.4 2.5E-06 8.4E-11 70.7 11.3 107 24-171 69-244 (302)
61 1y8c_A S-adenosylmethionine-de 98.4 5E-06 1.7E-10 65.2 11.8 105 27-170 37-225 (246)
62 4htf_A S-adenosylmethionine-de 98.4 1.9E-06 6.4E-11 70.6 9.5 103 28-172 69-234 (285)
63 2fk8_A Methoxy mycolic acid sy 98.4 2.3E-06 7.7E-11 71.3 10.0 105 25-170 88-254 (318)
64 3cc8_A Putative methyltransfer 98.3 4.6E-06 1.6E-10 64.7 10.2 111 15-171 23-186 (230)
65 2zfu_A Nucleomethylin, cerebra 98.3 6E-06 2E-10 64.5 10.6 113 17-180 58-189 (215)
66 3gu3_A Methyltransferase; alph 98.3 5.1E-06 1.7E-10 68.5 10.7 104 24-168 19-188 (284)
67 3ccf_A Cyclopropane-fatty-acyl 98.3 5.4E-06 1.8E-10 67.8 10.1 113 15-170 47-210 (279)
68 1ri5_A MRNA capping enzyme; me 98.2 5.6E-06 1.9E-10 67.1 9.8 106 26-170 63-250 (298)
69 3d2l_A SAM-dependent methyltra 98.2 2.2E-05 7.5E-10 61.8 12.9 105 25-170 31-223 (243)
70 2p35_A Trans-aconitate 2-methy 98.2 5.6E-06 1.9E-10 66.0 8.3 66 15-82 23-104 (259)
71 3bkx_A SAM-dependent methyltra 98.2 1.4E-05 4.8E-10 64.5 10.6 140 16-170 34-219 (275)
72 3e05_A Precorrin-6Y C5,15-meth 98.2 1.9E-05 6.4E-10 61.5 10.9 105 16-167 31-164 (204)
73 3ggd_A SAM-dependent methyltra 98.1 1.4E-05 4.8E-10 63.6 9.5 102 25-169 54-218 (245)
74 2p8j_A S-adenosylmethionine-de 98.1 1.5E-05 5E-10 61.5 8.9 112 16-167 13-180 (209)
75 2b3t_A Protein methyltransfera 98.1 2E-05 6.7E-10 64.9 9.8 129 26-180 108-274 (276)
76 3q87_B N6 adenine specific DNA 98.1 0.00012 4E-09 56.3 13.4 119 15-179 11-159 (170)
77 1vlm_A SAM-dependent methyltra 98.0 5E-05 1.7E-09 59.8 10.8 102 28-171 48-189 (219)
78 2xvm_A Tellurite resistance pr 98.0 3.2E-05 1.1E-09 58.9 9.3 112 15-170 22-173 (199)
79 1dus_A MJ0882; hypothetical pr 98.0 7.3E-05 2.5E-09 56.1 10.1 122 15-180 42-192 (194)
80 1pjz_A Thiopurine S-methyltran 97.9 2.1E-05 7.3E-10 62.1 7.3 107 25-171 20-177 (203)
81 2i62_A Nicotinamide N-methyltr 97.9 4.3E-05 1.5E-09 60.8 8.7 55 117-171 162-240 (265)
82 1wzn_A SAM-dependent methyltra 97.8 0.00016 5.4E-09 57.5 11.0 52 27-78 41-110 (252)
83 3giw_A Protein of unknown func 97.8 6.6E-05 2.3E-09 64.7 9.2 98 27-165 78-242 (277)
84 2g72_A Phenylethanolamine N-me 97.8 6.2E-05 2.1E-09 61.8 7.9 54 117-170 179-256 (289)
85 2a14_A Indolethylamine N-methy 97.8 5.5E-05 1.9E-09 61.9 7.4 54 117-170 161-238 (263)
86 2yqz_A Hypothetical protein TT 97.8 0.00016 5.5E-09 57.4 9.9 127 25-168 37-194 (263)
87 3thr_A Glycine N-methyltransfe 97.8 0.00011 3.8E-09 59.9 8.9 82 25-145 55-169 (293)
88 3mq2_A 16S rRNA methyltransfer 97.8 0.00017 5.7E-09 56.5 9.5 112 15-171 17-185 (218)
89 1yb2_A Hypothetical protein TA 97.7 3.4E-05 1.1E-09 63.6 5.1 106 16-169 101-236 (275)
90 3hm2_A Precorrin-6Y C5,15-meth 97.7 0.00017 5.9E-09 53.9 8.5 105 16-168 16-151 (178)
91 3mb5_A SAM-dependent methyltra 97.7 9.3E-05 3.2E-09 59.3 7.4 109 15-171 83-223 (255)
92 4dzr_A Protein-(glutamine-N5) 97.7 1.4E-05 4.7E-10 61.3 2.2 120 26-178 29-201 (215)
93 2qm3_A Predicted methyltransfe 97.7 0.00028 9.6E-09 61.1 10.4 101 28-170 173-309 (373)
94 2kw5_A SLR1183 protein; struct 97.7 0.00034 1.2E-08 53.8 9.8 96 30-169 32-170 (202)
95 4e2x_A TCAB9; kijanose, tetron 97.6 0.00016 5.4E-09 62.7 8.7 113 15-171 97-254 (416)
96 1fbn_A MJ fibrillarin homologu 97.6 0.00015 5.1E-09 57.9 7.9 110 25-179 72-225 (230)
97 2pwy_A TRNA (adenine-N(1)-)-me 97.6 0.00017 6E-09 57.3 7.5 106 16-169 87-223 (258)
98 3m70_A Tellurite resistance pr 97.6 0.00021 7.2E-09 58.3 7.9 111 15-168 110-258 (286)
99 2h00_A Methyltransferase 10 do 97.5 0.00012 4E-09 59.0 5.9 55 28-82 66-149 (254)
100 2nxc_A L11 mtase, ribosomal pr 97.5 0.00021 7.4E-09 58.5 7.6 106 25-176 118-250 (254)
101 3bgv_A MRNA CAP guanine-N7 met 97.5 0.00065 2.2E-08 56.5 10.3 81 26-145 33-149 (313)
102 1l3i_A Precorrin-6Y methyltran 97.5 0.0002 6.8E-09 53.6 5.9 102 15-164 23-154 (192)
103 3bwc_A Spermidine synthase; SA 97.4 0.00022 7.6E-09 60.3 6.7 105 26-169 94-239 (304)
104 2yxd_A Probable cobalt-precorr 97.4 0.00075 2.6E-08 50.2 8.5 104 15-167 25-154 (183)
105 1o54_A SAM-dependent O-methylt 97.4 0.00019 6.5E-09 58.8 5.6 107 16-170 103-239 (277)
106 3m33_A Uncharacterized protein 97.4 0.00033 1.1E-08 55.6 6.6 97 26-169 47-166 (226)
107 3lpm_A Putative methyltransfer 97.4 0.0021 7.2E-08 52.1 11.5 131 17-170 39-201 (259)
108 3g5t_A Trans-aconitate 3-methy 97.4 0.00058 2E-08 56.3 8.2 44 26-69 35-100 (299)
109 2ipx_A RRNA 2'-O-methyltransfe 97.4 0.0011 3.8E-08 52.6 9.4 104 25-172 75-219 (233)
110 3njr_A Precorrin-6Y methylase; 97.3 0.0021 7.2E-08 50.8 10.5 104 16-168 46-178 (204)
111 2gb4_A Thiopurine S-methyltran 97.3 0.00066 2.3E-08 56.1 7.5 103 27-169 68-226 (252)
112 3kr9_A SAM-dependent methyltra 97.2 0.0046 1.6E-07 51.3 12.0 111 27-180 15-156 (225)
113 3lec_A NADB-rossmann superfami 97.2 0.0044 1.5E-07 51.7 11.6 111 27-180 21-162 (230)
114 2aot_A HMT, histamine N-methyl 97.2 0.00063 2.1E-08 56.1 6.3 50 117-168 140-219 (292)
115 3ofk_A Nodulation protein S; N 97.2 0.0011 3.8E-08 51.4 7.3 81 26-145 50-148 (216)
116 2pjd_A Ribosomal RNA small sub 97.1 3.9E-05 1.3E-09 65.6 -1.3 90 15-145 186-297 (343)
117 1jsx_A Glucose-inhibited divis 97.1 0.0012 4.1E-08 50.8 6.8 94 28-168 66-186 (207)
118 1zx0_A Guanidinoacetate N-meth 97.1 0.00051 1.7E-08 54.7 4.7 100 26-164 59-204 (236)
119 2ld4_A Anamorsin; methyltransf 97.0 0.002 7E-08 48.7 7.0 93 25-162 10-128 (176)
120 2gs9_A Hypothetical protein TT 96.9 0.0031 1.1E-07 48.6 8.0 91 27-161 36-171 (211)
121 3b3j_A Histone-arginine methyl 96.9 0.001 3.5E-08 60.3 6.0 82 25-145 156-257 (480)
122 1yzh_A TRNA (guanine-N(7)-)-me 96.9 0.0062 2.1E-07 47.6 9.5 102 28-169 42-181 (214)
123 3evz_A Methyltransferase; NYSG 96.9 0.0088 3E-07 46.8 10.1 127 25-173 53-209 (230)
124 3orh_A Guanidinoacetate N-meth 96.8 0.00067 2.3E-08 54.9 3.5 105 27-167 60-207 (236)
125 2ozv_A Hypothetical protein AT 96.8 0.0064 2.2E-07 49.8 9.4 132 25-180 34-210 (260)
126 2vdw_A Vaccinia virus capping 96.8 0.0065 2.2E-07 51.4 9.3 29 117-145 134-163 (302)
127 3gnl_A Uncharacterized protein 96.8 0.013 4.4E-07 49.3 11.0 99 27-168 21-147 (244)
128 4hg2_A Methyltransferase type 96.7 0.012 4E-07 48.9 10.1 76 28-145 40-129 (257)
129 1ej0_A FTSJ; methyltransferase 96.6 0.011 3.9E-07 42.9 8.6 107 17-168 13-159 (180)
130 3bzb_A Uncharacterized protein 96.6 0.013 4.4E-07 48.5 9.7 102 27-169 79-236 (281)
131 3p2e_A 16S rRNA methylase; met 96.6 0.024 8.2E-07 45.7 11.1 47 26-73 23-92 (225)
132 4dcm_A Ribosomal RNA large sub 96.6 0.00045 1.6E-08 60.5 0.8 89 16-145 213-328 (375)
133 1xdz_A Methyltransferase GIDB; 96.6 0.0033 1.1E-07 50.3 5.8 99 26-169 69-201 (240)
134 2plw_A Ribosomal RNA methyltra 96.6 0.019 6.4E-07 43.8 9.7 37 131-168 134-177 (201)
135 1af7_A Chemotaxis receptor met 96.5 0.0031 1.1E-07 53.4 5.6 48 59-145 195-246 (274)
136 1g8a_A Fibrillarin-like PRE-rR 96.5 0.019 6.6E-07 44.9 9.7 103 25-173 71-215 (227)
137 3duw_A OMT, O-methyltransferas 96.5 0.0081 2.8E-07 46.9 7.4 77 25-145 56-161 (223)
138 3iei_A Leucine carboxyl methyl 96.4 0.07 2.4E-06 46.6 13.8 25 146-170 257-281 (334)
139 3ntv_A MW1564 protein; rossman 96.4 0.013 4.4E-07 46.8 8.3 78 24-145 68-170 (232)
140 3hp7_A Hemolysin, putative; st 96.4 0.0075 2.6E-07 51.9 7.2 31 148-178 210-242 (291)
141 2pxx_A Uncharacterized protein 96.3 0.013 4.3E-07 44.7 7.3 98 25-162 40-175 (215)
142 3htx_A HEN1; HEN1, small RNA m 96.2 0.066 2.3E-06 53.1 13.8 81 26-145 720-829 (950)
143 3tfw_A Putative O-methyltransf 96.2 0.011 3.9E-07 47.8 7.1 77 25-145 61-164 (248)
144 2avn_A Ubiquinone/menaquinone 96.2 0.0057 2E-07 49.2 5.2 51 27-77 54-118 (260)
145 1ne2_A Hypothetical protein TA 96.2 0.014 4.8E-07 44.8 7.0 99 27-168 51-168 (200)
146 2y1w_A Histone-arginine methyl 96.2 0.0093 3.2E-07 51.1 6.5 81 26-145 49-149 (348)
147 2fca_A TRNA (guanine-N(7)-)-me 96.1 0.024 8.3E-07 44.8 8.4 102 28-169 39-178 (213)
148 3eey_A Putative rRNA methylase 96.1 0.012 4.2E-07 44.9 6.3 115 25-171 20-174 (197)
149 3opn_A Putative hemolysin; str 96.0 0.0064 2.2E-07 49.7 4.7 22 148-169 162-183 (232)
150 3mti_A RRNA methylase; SAM-dep 96.0 0.029 1E-06 42.3 8.0 113 25-172 20-171 (185)
151 1nv8_A HEMK protein; class I a 96.0 0.048 1.6E-06 45.6 9.9 121 27-178 123-278 (284)
152 3tr6_A O-methyltransferase; ce 96.0 0.023 7.8E-07 44.2 7.4 77 25-145 62-168 (225)
153 1i9g_A Hypothetical protein RV 95.9 0.036 1.2E-06 44.6 8.5 107 15-169 89-229 (280)
154 1wy7_A Hypothetical protein PH 95.8 0.039 1.3E-06 42.3 8.2 101 27-169 49-174 (207)
155 3adn_A Spermidine synthase; am 95.8 0.034 1.2E-06 47.1 8.4 52 26-77 82-161 (294)
156 2frn_A Hypothetical protein PH 95.8 0.062 2.1E-06 44.4 9.7 96 25-166 123-253 (278)
157 3lcv_B Sisomicin-gentamicin re 95.7 0.016 5.3E-07 50.4 6.1 101 27-167 132-269 (281)
158 4df3_A Fibrillarin-like rRNA/T 95.7 0.066 2.2E-06 44.5 9.7 105 25-172 75-219 (233)
159 2b25_A Hypothetical protein; s 95.7 0.035 1.2E-06 46.7 8.0 135 15-170 95-281 (336)
160 1ixk_A Methyltransferase; open 95.7 0.023 8E-07 48.1 6.9 118 24-167 115-272 (315)
161 3dou_A Ribosomal RNA large sub 95.7 0.045 1.5E-06 42.9 8.0 122 17-174 16-169 (191)
162 3u81_A Catechol O-methyltransf 95.7 0.11 3.9E-06 40.6 10.4 99 25-165 56-192 (221)
163 2hnk_A SAM-dependent O-methylt 95.5 0.025 8.7E-07 44.9 6.2 46 25-70 58-124 (239)
164 3iv6_A Putative Zn-dependent a 95.5 0.028 9.5E-07 47.3 6.7 87 15-145 35-142 (261)
165 2bm8_A Cephalosporin hydroxyla 95.5 0.09 3.1E-06 42.4 9.5 97 26-166 80-215 (236)
166 1rjd_A PPM1P, carboxy methyl t 95.4 0.088 3E-06 45.6 9.8 44 26-69 96-178 (334)
167 3id6_C Fibrillarin-like rRNA/T 95.4 0.15 5E-06 42.1 10.7 114 15-172 63-218 (232)
168 3gdh_A Trimethylguanosine synt 95.4 0.0045 1.6E-07 48.9 1.5 54 27-80 78-151 (241)
169 1nt2_A Fibrillarin-like PRE-rR 95.4 0.19 6.6E-06 39.7 11.0 102 26-171 56-196 (210)
170 3r3h_A O-methyltransferase, SA 95.4 0.024 8.2E-07 46.0 5.7 47 25-71 58-125 (242)
171 3uwp_A Histone-lysine N-methyl 95.3 0.034 1.2E-06 50.9 7.1 87 15-145 163-282 (438)
172 3c3p_A Methyltransferase; NP_9 95.3 0.018 6.1E-07 44.7 4.4 48 25-72 54-122 (210)
173 1iy9_A Spermidine synthase; ro 95.2 0.019 6.6E-07 47.7 4.8 102 27-168 75-216 (275)
174 3dmg_A Probable ribosomal RNA 95.2 0.015 5.2E-07 51.1 4.2 92 15-145 217-334 (381)
175 2yvl_A TRMI protein, hypotheti 95.2 0.042 1.4E-06 43.1 6.3 104 16-169 82-214 (248)
176 3g89_A Ribosomal RNA small sub 95.1 0.018 6.1E-07 47.2 4.1 99 27-170 80-212 (249)
177 2gpy_A O-methyltransferase; st 95.1 0.012 4.1E-07 46.5 2.9 46 25-70 52-117 (233)
178 2uyo_A Hypothetical protein ML 95.1 0.073 2.5E-06 45.7 8.1 45 26-70 101-165 (310)
179 2i7c_A Spermidine synthase; tr 95.0 0.051 1.7E-06 45.3 6.8 101 27-168 78-219 (283)
180 1inl_A Spermidine synthase; be 95.0 0.027 9.1E-07 47.4 5.0 51 27-77 90-167 (296)
181 2avd_A Catechol-O-methyltransf 95.0 0.067 2.3E-06 41.6 7.0 47 24-70 66-133 (229)
182 2vdv_E TRNA (guanine-N(7)-)-me 94.9 0.039 1.3E-06 44.2 5.5 46 27-72 49-121 (246)
183 1mjf_A Spermidine synthase; sp 94.6 0.064 2.2E-06 44.5 6.3 51 27-77 75-156 (281)
184 1g6q_1 HnRNP arginine N-methyl 94.4 0.085 2.9E-06 44.7 6.7 53 25-77 36-109 (328)
185 3ckk_A TRNA (guanine-N(7)-)-me 94.3 0.1 3.5E-06 42.3 6.8 45 27-71 46-115 (235)
186 3dr5_A Putative O-methyltransf 94.3 0.096 3.3E-06 41.9 6.6 42 30-71 59-122 (221)
187 2pt6_A Spermidine synthase; tr 94.2 0.089 3E-06 44.9 6.5 51 27-77 116-193 (321)
188 1jg1_A PIMT;, protein-L-isoasp 94.1 0.054 1.9E-06 42.9 4.7 60 15-77 81-162 (235)
189 2yxe_A Protein-L-isoaspartate 94.0 0.089 3.1E-06 40.5 5.6 81 16-145 68-171 (215)
190 3fpf_A Mtnas, putative unchara 93.9 0.1 3.4E-06 45.2 6.3 76 25-145 120-216 (298)
191 3fzg_A 16S rRNA methylase; met 93.9 0.072 2.5E-06 44.0 5.0 102 26-171 48-188 (200)
192 2fyt_A Protein arginine N-meth 93.8 0.12 4.2E-06 44.1 6.6 53 25-77 62-135 (340)
193 3q7e_A Protein arginine N-meth 93.8 0.1 3.5E-06 44.6 6.1 81 26-145 65-167 (349)
194 3tma_A Methyltransferase; thum 93.8 0.27 9.2E-06 41.6 8.7 121 15-171 193-340 (354)
195 3lbf_A Protein-L-isoaspartate 93.7 0.12 4.1E-06 39.6 5.7 59 16-77 68-147 (210)
196 2nyu_A Putative ribosomal RNA 93.7 0.13 4.6E-06 38.7 5.9 37 131-168 125-168 (196)
197 3c3y_A Pfomt, O-methyltransfer 93.6 0.056 1.9E-06 43.4 3.9 46 25-70 68-134 (237)
198 3gjy_A Spermidine synthase; AP 93.6 0.073 2.5E-06 46.2 4.8 48 30-77 92-163 (317)
199 2xyq_A Putative 2'-O-methyl tr 93.5 0.21 7.1E-06 42.6 7.5 106 26-168 62-195 (290)
200 1p91_A Ribosomal RNA large sub 93.2 0.34 1.2E-05 38.6 7.8 52 26-77 84-152 (269)
201 2b2c_A Spermidine synthase; be 93.0 0.14 4.8E-06 43.7 5.6 52 26-77 107-185 (314)
202 1o9g_A RRNA methyltransferase; 93.0 0.15 5.2E-06 40.6 5.5 19 127-145 190-208 (250)
203 1zq9_A Probable dimethyladenos 92.9 0.19 6.6E-06 41.7 6.2 67 15-83 18-103 (285)
204 3r0q_C Probable protein argini 92.9 0.18 6.2E-06 43.6 6.2 81 26-145 62-163 (376)
205 1sui_A Caffeoyl-COA O-methyltr 92.6 0.11 3.8E-06 42.2 4.3 46 25-70 77-143 (247)
206 3k6r_A Putative transferase PH 92.4 0.35 1.2E-05 41.0 7.2 58 25-82 123-201 (278)
207 3p9n_A Possible methyltransfer 92.2 0.68 2.3E-05 35.0 8.1 79 27-145 44-147 (189)
208 1uir_A Polyamine aminopropyltr 92.1 0.23 7.9E-06 41.9 5.8 102 27-168 77-223 (314)
209 2fhp_A Methylase, putative; al 92.0 0.096 3.3E-06 39.0 3.0 44 27-70 44-106 (187)
210 2ih2_A Modification methylase 91.9 0.79 2.7E-05 39.0 8.9 120 27-162 39-186 (421)
211 1ws6_A Methyltransferase; stru 91.4 0.18 6.1E-06 36.8 3.8 49 27-77 41-114 (171)
212 3cbg_A O-methyltransferase; cy 91.3 0.18 6.1E-06 40.1 4.0 45 25-69 70-135 (232)
213 2esr_A Methyltransferase; stru 91.3 0.067 2.3E-06 39.9 1.4 62 15-77 20-104 (177)
214 3frh_A 16S rRNA methylase; met 91.2 0.69 2.4E-05 39.4 7.7 80 26-145 104-200 (253)
215 3dxy_A TRNA (guanine-N(7)-)-me 91.1 0.15 5.2E-06 40.7 3.5 44 27-70 34-96 (218)
216 2yxl_A PH0851 protein, 450AA l 91.1 0.54 1.8E-05 41.6 7.3 118 24-167 256-416 (450)
217 1vbf_A 231AA long hypothetical 91.1 0.51 1.7E-05 36.6 6.4 60 16-77 61-138 (231)
218 1u2z_A Histone-lysine N-methyl 90.8 0.77 2.6E-05 41.4 8.1 86 16-145 233-353 (433)
219 1dl5_A Protein-L-isoaspartate 90.5 0.44 1.5E-05 39.8 5.8 60 16-77 66-148 (317)
220 2o07_A Spermidine synthase; st 90.3 0.18 6.3E-06 42.6 3.4 52 26-77 94-172 (304)
221 1sqg_A SUN protein, FMU protei 89.9 0.6 2.1E-05 40.9 6.5 116 24-165 243-399 (429)
222 3tm4_A TRNA (guanine N2-)-meth 89.8 1.9 6.3E-05 37.1 9.4 114 25-171 215-353 (373)
223 1uwv_A 23S rRNA (uracil-5-)-me 89.8 2 7E-05 37.7 9.9 47 25-72 284-348 (433)
224 2zwa_A Leucine carboxyl methyl 89.7 3 0.0001 38.7 11.3 25 146-170 285-309 (695)
225 3ajd_A Putative methyltransfer 89.4 0.84 2.9E-05 37.3 6.6 114 24-167 80-238 (274)
226 1xj5_A Spermidine synthase 1; 89.4 0.54 1.9E-05 40.4 5.7 52 26-77 119-198 (334)
227 3a27_A TYW2, uncharacterized p 89.0 1 3.5E-05 36.9 6.9 52 25-77 117-190 (272)
228 3b5i_A S-adenosyl-L-methionine 88.9 3 0.0001 36.8 10.2 23 146-168 273-296 (374)
229 2igt_A SAM dependent methyltra 88.3 1.6 5.3E-05 37.3 7.8 108 27-165 153-299 (332)
230 2cmg_A Spermidine synthase; tr 87.7 1 3.4E-05 37.3 6.0 50 27-77 72-143 (262)
231 2pbf_A Protein-L-isoaspartate 87.5 1.5 5.3E-05 33.8 6.7 47 25-71 78-153 (227)
232 2p41_A Type II methyltransfera 85.4 1.7 5.8E-05 36.7 6.4 55 25-79 80-154 (305)
233 2qy6_A UPF0209 protein YFCK; s 85.1 0.31 1.1E-05 40.6 1.6 49 131-179 193-244 (257)
234 1m6y_A S-adenosyl-methyltransf 84.3 1.1 3.6E-05 38.2 4.6 69 15-85 16-110 (301)
235 3o4f_A Spermidine synthase; am 83.9 2.9 0.0001 35.9 7.2 52 26-77 82-161 (294)
236 1r18_A Protein-L-isoaspartate( 83.5 1 3.5E-05 35.1 3.9 53 25-77 82-167 (227)
237 2h1r_A Dimethyladenosine trans 83.5 5.2 0.00018 33.3 8.5 68 15-84 32-117 (299)
238 2yx1_A Hypothetical protein MJ 83.2 2 7E-05 36.3 6.0 100 25-169 193-316 (336)
239 3m4x_A NOL1/NOP2/SUN family pr 82.9 0.91 3.1E-05 41.1 3.8 119 24-168 102-261 (456)
240 2frx_A Hypothetical protein YE 82.6 9.7 0.00033 34.3 10.4 109 27-161 117-266 (479)
241 2ift_A Putative methylase HI07 82.1 0.55 1.9E-05 36.4 1.8 51 27-77 53-129 (201)
242 2f8l_A Hypothetical protein LM 81.7 3.3 0.00011 34.8 6.6 115 27-164 130-280 (344)
243 2as0_A Hypothetical protein PH 81.7 1.2 4.2E-05 38.3 4.1 106 27-164 217-360 (396)
244 1i1n_A Protein-L-isoaspartate 81.3 4.4 0.00015 31.1 6.8 61 17-77 67-155 (226)
245 3m6w_A RRNA methylase; rRNA me 81.2 2.7 9.2E-05 38.1 6.2 118 24-168 98-257 (464)
246 2oxt_A Nucleoside-2'-O-methylt 80.7 3.4 0.00012 34.1 6.3 52 25-77 72-144 (265)
247 4auk_A Ribosomal RNA large sub 79.3 16 0.00055 32.5 10.5 53 25-77 209-274 (375)
248 4hc4_A Protein arginine N-meth 77.7 4 0.00014 35.9 6.1 50 28-77 84-153 (376)
249 2wa2_A Non-structural protein 76.6 3.4 0.00012 34.4 5.1 52 25-77 80-152 (276)
250 2efj_A 3,7-dimethylxanthine me 76.2 6.2 0.00021 35.0 6.9 23 146-168 267-290 (384)
251 3sso_A Methyltransferase; macr 75.9 4 0.00014 37.0 5.7 75 27-145 216-318 (419)
252 2qfm_A Spermine synthase; sper 73.5 4 0.00014 36.2 4.9 44 27-70 188-257 (364)
253 1m6e_X S-adenosyl-L-methionnin 71.2 36 0.0012 29.7 10.5 22 146-167 255-277 (359)
254 3c0k_A UPF0064 protein YCCW; P 69.0 4.7 0.00016 34.7 4.3 108 26-165 219-365 (396)
255 1wxx_A TT1595, hypothetical pr 68.4 3.4 0.00011 35.5 3.2 45 27-71 209-270 (382)
256 3ftd_A Dimethyladenosine trans 67.8 14 0.00047 30.0 6.7 68 15-84 21-106 (249)
257 2fpo_A Methylase YHHF; structu 65.7 3.6 0.00012 31.7 2.6 51 27-77 54-126 (202)
258 3v97_A Ribosomal RNA large sub 65.4 3.6 0.00012 38.8 3.1 111 26-167 538-679 (703)
259 2b78_A Hypothetical protein SM 65.0 7.8 0.00027 33.4 4.9 110 26-168 211-360 (385)
260 3tka_A Ribosomal RNA small sub 64.0 19 0.00064 31.9 7.2 68 15-84 47-139 (347)
261 1yub_A Ermam, rRNA methyltrans 62.7 11 0.00037 29.9 5.0 53 15-69 19-86 (245)
262 1wg8_A Predicted S-adenosylmet 62.5 17 0.0006 31.1 6.6 68 15-85 12-101 (285)
263 3gru_A Dimethyladenosine trans 61.4 13 0.00043 31.4 5.4 67 15-84 40-125 (295)
264 3tqs_A Ribosomal RNA small sub 59.9 22 0.00075 29.1 6.5 53 15-69 19-86 (255)
265 3evf_A RNA-directed RNA polyme 59.8 16 0.00055 31.3 5.8 54 125-179 156-220 (277)
266 1qam_A ERMC' methyltransferase 59.3 20 0.00069 28.6 6.1 56 15-72 20-91 (244)
267 4azs_A Methyltransferase WBDD; 54.3 9.6 0.00033 34.6 3.7 83 24-145 63-167 (569)
268 3uzu_A Ribosomal RNA small sub 50.6 13 0.00043 31.0 3.6 53 15-69 32-101 (279)
269 3c6k_A Spermine synthase; sper 49.7 16 0.00054 32.5 4.3 42 28-69 206-273 (381)
270 3vyw_A MNMC2; tRNA wobble urid 45.0 23 0.00079 30.6 4.5 59 119-177 188-255 (308)
271 3fut_A Dimethyladenosine trans 44.2 28 0.00095 28.9 4.8 67 15-84 37-121 (271)
272 3gcz_A Polyprotein; flavivirus 44.0 22 0.00075 30.5 4.2 51 128-179 176-237 (282)
273 4dmg_A Putative uncharacterize 43.3 27 0.00093 30.4 4.7 34 131-164 306-351 (393)
274 4gqb_A Protein arginine N-meth 39.7 27 0.00094 33.0 4.4 50 28-77 358-432 (637)
275 2k4m_A TR8_protein, UPF0146 pr 32.7 52 0.0018 25.9 4.4 53 16-77 24-93 (153)
276 2px2_A Genome polyprotein [con 32.5 62 0.0021 27.7 5.1 56 25-81 71-147 (269)
277 3k0b_A Predicted N6-adenine-sp 31.8 1.7E+02 0.0057 25.3 8.0 41 40-80 264-314 (393)
278 1qyr_A KSGA, high level kasuga 31.0 62 0.0021 26.2 4.7 53 15-69 11-78 (252)
279 3r24_A NSP16, 2'-O-methyl tran 30.8 58 0.002 28.8 4.8 41 127-169 193-240 (344)
280 2z30_B TK-subtilisin; thermoco 28.6 48 0.0016 21.5 3.0 32 36-67 28-60 (65)
281 1whz_A Hypothetical protein; a 28.1 67 0.0023 20.9 3.8 20 148-167 5-24 (70)
282 3eld_A Methyltransferase; flav 26.0 1E+02 0.0035 26.6 5.4 50 129-179 168-227 (300)
283 2jjq_A Uncharacterized RNA met 23.5 3.6E+02 0.012 23.4 10.9 52 25-77 288-357 (425)
284 3ouv_A Serine/threonine protei 22.1 1.6E+02 0.0055 18.8 4.9 23 146-168 14-36 (71)
285 3bt7_A TRNA (uracil-5-)-methyl 21.0 38 0.0013 28.7 1.7 42 29-70 215-273 (369)
286 3ldg_A Putative uncharacterize 20.9 2.2E+02 0.0074 24.6 6.6 41 40-80 257-307 (384)
287 3ldu_A Putative methylase; str 20.7 1.4E+02 0.0047 25.7 5.3 41 40-80 258-308 (385)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.97 E-value=2.3e-31 Score=231.01 Aligned_cols=139 Identities=18% Similarity=0.265 Sum_probs=130.1
Q ss_pred ChHHHhhccccchhHHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeechhhhhhhcc------CCCceE
Q 036440 1 FNQAVASDTQTVTASLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQPHVVANLLD------TNNLKY 62 (181)
Q Consensus 1 F~~aM~~~s~~~~~~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~DlP~Vv~~a~~------~~ri~~ 62 (181)
|+++|.+.+.... +.+++.| ||++.++||||| +||+++++++|+|+|++.++. .+||++
T Consensus 156 f~~aM~~~~~~~~-~~~~~~~--~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~ 232 (353)
T 4a6d_A 156 FMQALQEVWSVNG-RSVLTAF--DLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDF 232 (353)
T ss_dssp HHHHHHTTHHHHH-HHHHHSS--CGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEE
T ss_pred HHHHHHHHHHHHH-HHHHHhc--CcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceee
Confidence 6889998888877 8899999 899999999999 999999999999999987752 689999
Q ss_pred EecCCCCC-CCCcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHh
Q 036440 63 LADDFFQS-IPPVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAI 141 (181)
Q Consensus 63 ~~gDff~~-~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~ 141 (181)
++||||++ .|.+|+| ++++|||||+|++|++||++|+++|
T Consensus 233 ~~gD~~~~~~~~~D~~---------------------------------------~~~~vlh~~~d~~~~~iL~~~~~al 273 (353)
T 4a6d_A 233 QEGDFFKDPLPEADLY---------------------------------------ILARVLHDWADGKCSHLLERIYHTC 273 (353)
T ss_dssp EESCTTTSCCCCCSEE---------------------------------------EEESSGGGSCHHHHHHHHHHHHHHC
T ss_pred ecCccccCCCCCceEE---------------------------------------EeeeecccCCHHHHHHHHHHHHhhC
Confidence 99999975 5669999 9999999999999999999999999
Q ss_pred ccCC--------------------------------ccCCHHHHHHHHHhCCCeEEEEEEcCCCCeEEEEEC
Q 036440 142 TSKA--------------------------------KLSTEKELESLFVEVHFHHYKITPLFGLPSLIEVYP 181 (181)
Q Consensus 142 ~~~g--------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~~~ 181 (181)
+||| +|||.+||++||++|||++++++++++..++||++|
T Consensus 274 ~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~~~~~~~~~i~ArK 345 (353)
T 4a6d_A 274 KPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK 345 (353)
T ss_dssp CTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEECCSSSCEEEEEEC
T ss_pred CCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEEcCCceEEEEEEe
Confidence 9999 899999999999999999999999999999999986
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.94 E-value=2.8e-26 Score=199.82 Aligned_cols=140 Identities=29% Similarity=0.479 Sum_probs=131.0
Q ss_pred ChHHHhhccccchhHHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeechhhhhhhccCCCceEEecCCC
Q 036440 1 FNQAVASDTQTVTASLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQPHVVANLLDTNNLKYLADDFF 68 (181)
Q Consensus 1 F~~aM~~~s~~~~~~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~DlP~Vv~~a~~~~ri~~~~gDff 68 (181)
|+++|+..+.... +.+++.|+ +|+...+||||| +||+++++++|+|++++.+...+||+++.+|||
T Consensus 177 f~~~m~~~~~~~~-~~~~~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~ 254 (364)
T 3p9c_A 177 FNEGMKNHSIIIT-KKLLELYH-GFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMF 254 (364)
T ss_dssp HHHHHHHHHHHHH-HHHHHHCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTT
T ss_pred HHHHHHHhhHHHH-HHHHHhcc-cccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEEeCCcC
Confidence 6788988877766 78899994 399999999999 899999999999999999988899999999999
Q ss_pred CCCCCcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC---
Q 036440 69 QSIPPVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA--- 145 (181)
Q Consensus 69 ~~~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g--- 145 (181)
+++|.+|+| +++++||+|+|+++.++|++++++|+|||
T Consensus 255 ~~~p~~D~v---------------------------------------~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~ 295 (364)
T 3p9c_A 255 KEVPSGDTI---------------------------------------LMKWILHDWSDQHCATLLKNCYDALPAHGKVV 295 (364)
T ss_dssp TCCCCCSEE---------------------------------------EEESCGGGSCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred CCCCCCCEE---------------------------------------EehHHhccCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 988888999 99999999999999999999999999999
Q ss_pred ---------------------------------ccCCHHHHHHHHHhCCCeEEEEEEcCCCCeEEEEEC
Q 036440 146 ---------------------------------KLSTEKELESLFVEVHFHHYKITPLFGLPSLIEVYP 181 (181)
Q Consensus 146 ---------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~~~ 181 (181)
++||.+||+++|++|||+.+++.++++..++||+||
T Consensus 296 i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 296 LVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYIYANAWAIEFTK 364 (364)
T ss_dssp EEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred EEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEEEEcCCceEEEEEeC
Confidence 689999999999999999999999999999999997
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.93 E-value=1.5e-25 Score=195.21 Aligned_cols=140 Identities=29% Similarity=0.482 Sum_probs=130.7
Q ss_pred ChHHHhhccccchhHHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeechhhhhhhccCCCceEEecCCC
Q 036440 1 FNQAVASDTQTVTASLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQPHVVANLLDTNNLKYLADDFF 68 (181)
Q Consensus 1 F~~aM~~~s~~~~~~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~DlP~Vv~~a~~~~ri~~~~gDff 68 (181)
|+++|++.+.... +.+++.|+ +|++..+||||| +||+++++++|+|++++.+...+||+++.+|||
T Consensus 179 f~~~m~~~~~~~~-~~~~~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~ 256 (368)
T 3reo_A 179 FNKGMSSNSTITM-KKILEMYN-GFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMF 256 (368)
T ss_dssp HHHHHHHHHHHHH-HHHHTTCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTT
T ss_pred HHHHHHhhhhhHH-HHHHHhcc-cccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhcCCCEEEecCCC
Confidence 6788988887766 78889884 389999999999 899999999999999999988899999999999
Q ss_pred CCCCCcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC---
Q 036440 69 QSIPPVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA--- 145 (181)
Q Consensus 69 ~~~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g--- 145 (181)
+++|.+|+| +++++||+|+|+++.++|++++++|+|||
T Consensus 257 ~~~p~~D~v---------------------------------------~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~ 297 (368)
T 3reo_A 257 DGVPKGDAI---------------------------------------FIKWICHDWSDEHCLKLLKNCYAALPDHGKVI 297 (368)
T ss_dssp TCCCCCSEE---------------------------------------EEESCGGGBCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred CCCCCCCEE---------------------------------------EEechhhcCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 989988999 99999999999999999999999999999
Q ss_pred ---------------------------------ccCCHHHHHHHHHhCCCeEEEEEEcCCCCeEEEEEC
Q 036440 146 ---------------------------------KLSTEKELESLFVEVHFHHYKITPLFGLPSLIEVYP 181 (181)
Q Consensus 146 ---------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~~~ 181 (181)
++||.+||+++|++|||+.+++.+..+..++||+||
T Consensus 298 i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~~~~vie~~k 366 (368)
T 3reo_A 298 VAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366 (368)
T ss_dssp EEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred EEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEEEEeCCCcEEEEEEe
Confidence 689999999999999999999999999999999997
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.90 E-value=2.8e-23 Score=178.32 Aligned_cols=139 Identities=24% Similarity=0.388 Sum_probs=127.2
Q ss_pred ChHHHhhccccchhHHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeechhhhhhhc-----cCCCceEE
Q 036440 1 FNQAVASDTQTVTASLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQPHVVANLL-----DTNNLKYL 63 (181)
Q Consensus 1 F~~aM~~~s~~~~~~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~DlP~Vv~~a~-----~~~ri~~~ 63 (181)
|+++|++.+.... +.+++.+ +|+...+||||| ++|+++++++|+|+++..+. ..+||+++
T Consensus 161 f~~~m~~~~~~~~-~~~~~~~--~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~ 237 (348)
T 3lst_A 161 YYEGMETVSAAEH-LILARAG--DFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVV 237 (348)
T ss_dssp HHHHHHHHHHTTH-HHHHHHS--CCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEE
T ss_pred HHHHHHHhhhhhH-HHHHHhC--CccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEE
Confidence 5788988888777 8899999 899999999999 89999999999999887332 36799999
Q ss_pred ecCCCCCCCCcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhcc
Q 036440 64 ADDFFQSIPPVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITS 143 (181)
Q Consensus 64 ~gDff~~~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~ 143 (181)
.+|+|+++|..|+| +++++||+|+|+++.++|++++.+++|
T Consensus 238 ~~d~~~~~p~~D~v---------------------------------------~~~~vlh~~~d~~~~~~L~~~~~~Lkp 278 (348)
T 3lst_A 238 EGDFLREVPHADVH---------------------------------------VLKRILHNWGDEDSVRILTNCRRVMPA 278 (348)
T ss_dssp ECCTTTCCCCCSEE---------------------------------------EEESCGGGSCHHHHHHHHHHHHHTCCT
T ss_pred ecCCCCCCCCCcEE---------------------------------------EEehhccCCCHHHHHHHHHHHHHhcCC
Confidence 99999889988999 999999999999999999999999999
Q ss_pred CC-------------------------------ccCCHHHHHHHHHhCCCeEEEEEEcCCCCeEEEEEC
Q 036440 144 KA-------------------------------KLSTEKELESLFVEVHFHHYKITPLFGLPSLIEVYP 181 (181)
Q Consensus 144 ~g-------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~~~ 181 (181)
|| ++||.+||+++|++|||+++++++..+..++||++|
T Consensus 279 gG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 279 HGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVVGTSSVMSIAVGVP 347 (348)
T ss_dssp TCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEEECSSSCEEEEEEE
T ss_pred CCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEEECCCCcEEEEEEe
Confidence 99 579999999999999999999999878899999987
No 5
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.90 E-value=3.8e-23 Score=179.44 Aligned_cols=139 Identities=24% Similarity=0.394 Sum_probs=126.7
Q ss_pred ChHHHhhccccchhHHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeechhhhhhhcc-------CCCce
Q 036440 1 FNQAVASDTQTVTASLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQPHVVANLLD-------TNNLK 61 (181)
Q Consensus 1 F~~aM~~~s~~~~~~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~DlP~Vv~~a~~-------~~ri~ 61 (181)
|+++|...+.... +.+++.+ +|++..+||||| +||+++++++|+|.+++.+.. .+||+
T Consensus 179 f~~~m~~~~~~~~-~~l~~~~--~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~ 255 (369)
T 3gwz_A 179 FNRAMGSVSLTEA-GQVAAAY--DFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCE 255 (369)
T ss_dssp HHHHHHHHHHHHH-HHHHHHS--CCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEE
T ss_pred HHHHHHHHHhhhH-HHHHHhC--CCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcCCceE
Confidence 5678888777766 8889999 799999999999 899999999999999887752 58999
Q ss_pred EEecCCCCCCC-CcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHH
Q 036440 62 YLADDFFQSIP-PVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREA 140 (181)
Q Consensus 62 ~~~gDff~~~P-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a 140 (181)
++.+|+++++| ..|+| +++++||+|+|+++.++|++++.+
T Consensus 256 ~~~~d~~~~~p~~~D~v---------------------------------------~~~~vlh~~~d~~~~~~L~~~~~~ 296 (369)
T 3gwz_A 256 ILPGDFFETIPDGADVY---------------------------------------LIKHVLHDWDDDDVVRILRRIATA 296 (369)
T ss_dssp EEECCTTTCCCSSCSEE---------------------------------------EEESCGGGSCHHHHHHHHHHHHTT
T ss_pred EeccCCCCCCCCCceEE---------------------------------------EhhhhhccCCHHHHHHHHHHHHHH
Confidence 99999998888 48999 999999999999999999999999
Q ss_pred hccCC------------------------------ccCCHHHHHHHHHhCCCeEEEEEE-cCCCCeEEEEEC
Q 036440 141 ITSKA------------------------------KLSTEKELESLFVEVHFHHYKITP-LFGLPSLIEVYP 181 (181)
Q Consensus 141 ~~~~g------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~-~~~~~~viE~~~ 181 (181)
|+||| ++||.+||+++|++|||+++++++ ..+..++||++|
T Consensus 297 L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 297 MKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp CCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEEECSSSSEEEEEEEE
T ss_pred cCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEEECCCCCcEEEEEEe
Confidence 99999 569999999999999999999999 677889999987
No 6
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.90 E-value=4.5e-23 Score=177.31 Aligned_cols=140 Identities=48% Similarity=0.785 Sum_probs=125.5
Q ss_pred ChHHHhhccccchhHHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeechhhhhhhccCCCceEEecCCC
Q 036440 1 FNQAVASDTQTVTASLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQPHVVANLLDTNNLKYLADDFF 68 (181)
Q Consensus 1 F~~aM~~~s~~~~~~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~DlP~Vv~~a~~~~ri~~~~gDff 68 (181)
|+++|.+.+.... .+++.|+++|++..+||||| ++|+++++++|+|++++.+...++++++.+|++
T Consensus 169 f~~~m~~~~~~~~--~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~ 246 (358)
T 1zg3_A 169 FQDAMASDSRMFK--LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMF 246 (358)
T ss_dssp HHHHHHHHHHTHH--HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCCCSSEEEEECCTT
T ss_pred HHHHHhcccHHHH--HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhcccCCCcEEEeCccC
Confidence 5677877665543 67888855788999999999 799999999999999988876677999999999
Q ss_pred CCCCCcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhcc---CC
Q 036440 69 QSIPPVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITS---KA 145 (181)
Q Consensus 69 ~~~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~---~g 145 (181)
+++|.+|+| +++++||+|+|++|.++|++++++|+| ||
T Consensus 247 ~~~~~~D~v---------------------------------------~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG 287 (358)
T 1zg3_A 247 KSIPSADAV---------------------------------------LLKWVLHDWNDEQSLKILKNSKEAISHKGKDG 287 (358)
T ss_dssp TCCCCCSEE---------------------------------------EEESCGGGSCHHHHHHHHHHHHHHTGGGGGGC
T ss_pred CCCCCceEE---------------------------------------EEcccccCCCHHHHHHHHHHHHHhCCCCCCCc
Confidence 988889999 999999999999999999999999999 88
Q ss_pred -----------------------------------ccCCHHHHHHHHHhCCCeEEEEEEcCCCCeEEEEEC
Q 036440 146 -----------------------------------KLSTEKELESLFVEVHFHHYKITPLFGLPSLIEVYP 181 (181)
Q Consensus 146 -----------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~~~ 181 (181)
++||.+||+++|+++||+.+++++.++..++||++|
T Consensus 288 ~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 358 (358)
T 1zg3_A 288 KVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 358 (358)
T ss_dssp EEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEEEETTTEEEEEEEC
T ss_pred EEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEEecCCCcEEEEEeC
Confidence 357999999999999999999999988889999997
No 7
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.89 E-value=4.3e-23 Score=175.12 Aligned_cols=138 Identities=21% Similarity=0.262 Sum_probs=124.0
Q ss_pred ChHHHhhccccchhHHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeechhhhhhhcc-------CCCce
Q 036440 1 FNQAVASDTQTVTASLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQPHVVANLLD-------TNNLK 61 (181)
Q Consensus 1 F~~aM~~~s~~~~~~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~DlP~Vv~~a~~-------~~ri~ 61 (181)
|+++|.+.+.... +.+++.+ +|++..+||||| ++|+++++++|+|++++.+.. .+||+
T Consensus 146 f~~~m~~~~~~~~-~~~~~~~--~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~ 222 (332)
T 3i53_A 146 FDTLMSHHLELDY-TGIAAKY--DWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQ 222 (332)
T ss_dssp HHHHHHHHHHHHH-TTGGGSS--CCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEE
T ss_pred HHHHHHHhHHhhH-HHHHHhC--CCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeE
Confidence 5677777666555 6777888 788889999999 899999999999999987752 58999
Q ss_pred EEecCCCCCCC-CcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHH
Q 036440 62 YLADDFFQSIP-PVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREA 140 (181)
Q Consensus 62 ~~~gDff~~~P-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a 140 (181)
++.+|+++++| ..|+| +++++||+|+|+++.++|++++.+
T Consensus 223 ~~~~d~~~~~p~~~D~v---------------------------------------~~~~vlh~~~~~~~~~~l~~~~~~ 263 (332)
T 3i53_A 223 VVVGSFFDPLPAGAGGY---------------------------------------VLSAVLHDWDDLSAVAILRRCAEA 263 (332)
T ss_dssp EEECCTTSCCCCSCSEE---------------------------------------EEESCGGGSCHHHHHHHHHHHHHH
T ss_pred EecCCCCCCCCCCCcEE---------------------------------------EEehhhccCCHHHHHHHHHHHHHh
Confidence 99999998898 58999 999999999999999999999999
Q ss_pred hccCC----------------------------ccCCHHHHHHHHHhCCCeEEEEEEcCCCCeEEEEEC
Q 036440 141 ITSKA----------------------------KLSTEKELESLFVEVHFHHYKITPLFGLPSLIEVYP 181 (181)
Q Consensus 141 ~~~~g----------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~~~ 181 (181)
|+||| ++||.+||+++|++|||+++++++.++ .++||+++
T Consensus 264 L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~-~~vie~r~ 331 (332)
T 3i53_A 264 AGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPISY-VSIVEMTA 331 (332)
T ss_dssp HTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEECSS-SEEEEEEE
T ss_pred cCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEECCC-cEEEEEee
Confidence 99999 579999999999999999999999998 99999975
No 8
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.88 E-value=2.6e-22 Score=172.28 Aligned_cols=140 Identities=46% Similarity=0.854 Sum_probs=125.5
Q ss_pred ChHHHhhccccchhHHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeechhhhhhhccCCCceEEecCCC
Q 036440 1 FNQAVASDTQTVTASLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQPHVVANLLDTNNLKYLADDFF 68 (181)
Q Consensus 1 F~~aM~~~s~~~~~~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~DlP~Vv~~a~~~~ri~~~~gDff 68 (181)
|+++|+..+.... +. ++.|+++|++..+||||| +||+++++++|+|++++.+...++++++.+|++
T Consensus 164 f~~~m~~~~~~~~-~~-~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~ 241 (352)
T 1fp2_A 164 FNDAMASDSKLIN-LA-LRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMF 241 (352)
T ss_dssp HHHHHHHTHHHHH-HH-HHTCHHHHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCBTTEEEEECCTT
T ss_pred HHHHHHhcchhhh-hH-HHhcccccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhcccCCCcEEEecccc
Confidence 5678887777665 55 777754788999999999 789999999999999998877677999999999
Q ss_pred CCCCCcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhcc---CC
Q 036440 69 QSIPPVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITS---KA 145 (181)
Q Consensus 69 ~~~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~---~g 145 (181)
+++|..|+| +++++||+|+|+++.++|++++.+|+| ||
T Consensus 242 ~~~p~~D~v---------------------------------------~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG 282 (352)
T 1fp2_A 242 TSIPNADAV---------------------------------------LLKYILHNWTDKDCLRILKKCKEAVTNDGKRG 282 (352)
T ss_dssp TCCCCCSEE---------------------------------------EEESCGGGSCHHHHHHHHHHHHHHHSGGGCCC
T ss_pred CCCCCccEE---------------------------------------EeehhhccCCHHHHHHHHHHHHHhCCCCCCCc
Confidence 988889999 999999999999999999999999999 88
Q ss_pred ----------------------------------ccCCHHHHHHHHHhCCCeEEEEEEcCCCCeEEEEEC
Q 036440 146 ----------------------------------KLSTEKELESLFVEVHFHHYKITPLFGLPSLIEVYP 181 (181)
Q Consensus 146 ----------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~~~ 181 (181)
++||.+||+++|+++||+.+++++.++..++||++|
T Consensus 283 ~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 352 (352)
T 1fp2_A 283 KVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352 (352)
T ss_dssp EEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred EEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeEEEecCCCcEEEEEeC
Confidence 137889999999999999999999888889999997
No 9
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.87 E-value=1.3e-21 Score=165.50 Aligned_cols=137 Identities=22% Similarity=0.269 Sum_probs=123.8
Q ss_pred ChHHHhhccccchhHHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeechhhhhhhcc-------CCCce
Q 036440 1 FNQAVASDTQTVTASLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQPHVVANLLD-------TNNLK 61 (181)
Q Consensus 1 F~~aM~~~s~~~~~~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~DlP~Vv~~a~~-------~~ri~ 61 (181)
|+++| +.+.... +.+++.+ +|++ .+|+||| ++|+.+++++|+|++++.+.. .+|++
T Consensus 146 f~~~m-~~~~~~~-~~~~~~~--~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~ 220 (334)
T 2ip2_A 146 FLLAM-KASNLAF-HEIPRLL--DFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVS 220 (334)
T ss_dssp HHHHH-GGGHHHH-HHHHHHS--CCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEE
T ss_pred HHHHH-HHHHHHH-HHHHHhC--CCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEE
Confidence 56788 7776666 7888999 7888 9999999 789999999999998887653 57999
Q ss_pred EEecCCCCCCCC-cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHH
Q 036440 62 YLADDFFQSIPP-VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREA 140 (181)
Q Consensus 62 ~~~gDff~~~P~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a 140 (181)
++.+|+++++|. .|+| +++++||+|+|+++.++|++++.+
T Consensus 221 ~~~~d~~~~~~~~~D~v---------------------------------------~~~~vl~~~~~~~~~~~l~~~~~~ 261 (334)
T 2ip2_A 221 LVGGDMLQEVPSNGDIY---------------------------------------LLSRIIGDLDEAASLRLLGNCREA 261 (334)
T ss_dssp EEESCTTTCCCSSCSEE---------------------------------------EEESCGGGCCHHHHHHHHHHHHHH
T ss_pred EecCCCCCCCCCCCCEE---------------------------------------EEchhccCCCHHHHHHHHHHHHHh
Confidence 999999998886 7999 999999999999999999999999
Q ss_pred hccCC-------------------------------ccCCHHHHHHHHHhCCCeEEEEEEcCCCCeEEEEEC
Q 036440 141 ITSKA-------------------------------KLSTEKELESLFVEVHFHHYKITPLFGLPSLIEVYP 181 (181)
Q Consensus 141 ~~~~g-------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~~~ 181 (181)
++||| ++||.+||+++|+++||+++++++.++..++||++|
T Consensus 262 L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 262 MAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp SCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEETTTEEEEEEEE
T ss_pred cCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEEECCCCCEEEEEEe
Confidence 99999 578999999999999999999999988889999986
No 10
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.86 E-value=1.2e-21 Score=169.62 Aligned_cols=140 Identities=26% Similarity=0.477 Sum_probs=124.8
Q ss_pred ChHHHhhccccchhHHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeechhhhhhhccCCCceEEecCCC
Q 036440 1 FNQAVASDTQTVTASLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQPHVVANLLDTNNLKYLADDFF 68 (181)
Q Consensus 1 F~~aM~~~s~~~~~~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~DlP~Vv~~a~~~~ri~~~~gDff 68 (181)
|+++|...+.... +.+++.|+ +|++..+||||| ++|+++++++|+|++++.+...++++++.+|++
T Consensus 185 f~~~m~~~~~~~~-~~l~~~~~-~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~ 262 (372)
T 1fp1_D 185 FNKSMVDVCATEM-KRMLEIYT-GFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMF 262 (372)
T ss_dssp HHHHHHHHHHHHH-HHHHHHCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTT
T ss_pred HHHHHHhhhHHHH-HHHHHHhh-ccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhhcCCCEEEeCCcc
Confidence 5778887777666 78889983 488889999999 799999999999999998887778999999999
Q ss_pred CCCCCcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC---
Q 036440 69 QSIPPVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA--- 145 (181)
Q Consensus 69 ~~~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g--- 145 (181)
+++|..|+| ++.++||+|+|+++.++|++++.+|+|||
T Consensus 263 ~~~~~~D~v---------------------------------------~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~ 303 (372)
T 1fp1_D 263 ASVPQGDAM---------------------------------------ILKAVCHNWSDEKCIEFLSNCHKALSPNGKVI 303 (372)
T ss_dssp TCCCCEEEE---------------------------------------EEESSGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCCCCCEE---------------------------------------EEecccccCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 988889999 99999999999999999999999999888
Q ss_pred --------------------------------ccCCHHHHHHHHHhCCCeEEEEEE-cCCCCeEEEEEC
Q 036440 146 --------------------------------KLSTEKELESLFVEVHFHHYKITP-LFGLPSLIEVYP 181 (181)
Q Consensus 146 --------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~-~~~~~~viE~~~ 181 (181)
++||.+||+++|+++||+.+++++ .++..++||++|
T Consensus 304 i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 304 IVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp EEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEC
T ss_pred EEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEEEcCCCCeEEEEEeC
Confidence 457899999999999999999998 455249999997
No 11
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.84 E-value=1.1e-20 Score=163.48 Aligned_cols=126 Identities=18% Similarity=0.261 Sum_probs=110.7
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeechhhhhhhcc-------CCCceEEecCCCCC---CC
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQPHVVANLLD-------TNNLKYLADDFFQS---IP 72 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~DlP~Vv~~a~~-------~~ri~~~~gDff~~---~P 72 (181)
..+++.+ ..++..+||||| +||+++++++|+|++++.+.. .+||+++.+|+++. +|
T Consensus 169 ~~~l~~~--~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p 246 (363)
T 3dp7_A 169 GKALEIV--FSHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP 246 (363)
T ss_dssp HHHHHHH--GGGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC
T ss_pred HHHHHHh--cccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCC
Confidence 3556665 346789999999 889999999999999987753 36999999999984 67
Q ss_pred C-cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------
Q 036440 73 P-VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------ 145 (181)
Q Consensus 73 ~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------ 145 (181)
. .|+| +++++||+|+|+++.++|++++.+|+|||
T Consensus 247 ~~~D~v---------------------------------------~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 247 TGFDAV---------------------------------------WMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp CCCSEE---------------------------------------EEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCcCEE---------------------------------------EEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 4 7999 99999999999999999999999999999
Q ss_pred ------------------------------ccCCHHHHHHHHHhCCCeEEEEEEcCCC-CeEEEEEC
Q 036440 146 ------------------------------KLSTEKELESLFVEVHFHHYKITPLFGL-PSLIEVYP 181 (181)
Q Consensus 146 ------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~-~~viE~~~ 181 (181)
++||.+||+++|++|||+++++++..+. .++||++|
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~v~~~~~~g~~~svi~~~~ 354 (363)
T 3dp7_A 288 TLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEVEEIQDNIGLGHSILQCRL 354 (363)
T ss_dssp CCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEESCCCCCBTTTBEEEEEEE
T ss_pred eccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeEEEEEeCCCCCceEEEEee
Confidence 4789999999999999999999977654 89999975
No 12
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.80 E-value=5.4e-19 Score=151.66 Aligned_cols=138 Identities=14% Similarity=0.229 Sum_probs=122.2
Q ss_pred ChHHHhhccc-cchhHHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeechhhhhhhc-------cCCCc
Q 036440 1 FNQAVASDTQ-TVTASLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQPHVVANLL-------DTNNL 60 (181)
Q Consensus 1 F~~aM~~~s~-~~~~~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~DlP~Vv~~a~-------~~~ri 60 (181)
|+++|+..+. ... +.+++.+ +++...+||||| ++|+++++++|+|.+++.+. ..+|+
T Consensus 166 f~~~m~~~~~~~~~-~~l~~~~--~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v 242 (359)
T 1x19_A 166 YFEEIHRSNAKFAI-QLLLEEA--KLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRM 242 (359)
T ss_dssp HHHHHHHTTCHHHH-HHHHHHC--CCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCTTTE
T ss_pred HHHHHHHhccchhH-HHHHHhc--CCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCCCE
Confidence 5778888877 655 7889999 788899999999 79999999999999988775 35689
Q ss_pred eEEecCCCC-CCCCcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHH
Q 036440 61 KYLADDFFQ-SIPPVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICRE 139 (181)
Q Consensus 61 ~~~~gDff~-~~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~ 139 (181)
+++.+|+++ ++|..|+| ++.++||+|+|+++.++|++++.
T Consensus 243 ~~~~~d~~~~~~~~~D~v---------------------------------------~~~~vlh~~~d~~~~~~l~~~~~ 283 (359)
T 1x19_A 243 RGIAVDIYKESYPEADAV---------------------------------------LFCRILYSANEQLSTIMCKKAFD 283 (359)
T ss_dssp EEEECCTTTSCCCCCSEE---------------------------------------EEESCGGGSCHHHHHHHHHHHHT
T ss_pred EEEeCccccCCCCCCCEE---------------------------------------EEechhccCCHHHHHHHHHHHHH
Confidence 999999997 46667999 99999999999999999999999
Q ss_pred HhccCC------------------------------cc----CCHHHHHHHHHhCCCeEEEEEEcCCCCeEEEEEC
Q 036440 140 AITSKA------------------------------KL----STEKELESLFVEVHFHHYKITPLFGLPSLIEVYP 181 (181)
Q Consensus 140 a~~~~g------------------------------~e----Rt~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~~~ 181 (181)
+++||| ++ +|.+||+++|+++||+.+++.+.+ ..++||++|
T Consensus 284 ~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~~~~~-~~~vi~a~k 358 (359)
T 1x19_A 284 AMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDVTMVRKY-DHLLVQAVK 358 (359)
T ss_dssp TCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEEEEET-TEEEEEEEC
T ss_pred hcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEEEecC-CceEEEEeC
Confidence 999998 12 899999999999999999999887 679999986
No 13
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.79 E-value=4.6e-19 Score=150.84 Aligned_cols=136 Identities=10% Similarity=0.138 Sum_probs=114.2
Q ss_pred ChHHHhhccccchhHHHHHHhhhhhcC-CCeEEEec------------CCCCceEEEeechhhhhhhcc-------CCCc
Q 036440 1 FNQAVASDTQTVTASLALKYCKQIFER-LGSLVDVG------------AFPCVKCTEFDQPHVVANLLD-------TNNL 60 (181)
Q Consensus 1 F~~aM~~~s~~~~~~~~l~~~~~d~~~-~~~lvDvG------------~~P~l~~~~~DlP~Vv~~a~~-------~~ri 60 (181)
|+++|.+.... . ..+++.+ ++++ ..+||||| ++|+++++++|+|++++.+.. .+|+
T Consensus 156 f~~~m~~~~~~-~-~~~l~~~--~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v 231 (352)
T 3mcz_A 156 FNDAMVRLSQP-M-VDVVSEL--GVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRV 231 (352)
T ss_dssp HHHHHHHHHHH-H-HHHHHTC--GGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGE
T ss_pred HHHHHHhhhhh-H-HHHHHhC--CCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCce
Confidence 56778763222 1 3688888 7887 89999999 899999999999998876642 4689
Q ss_pred eEEecCCCCC---CCC-cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHH
Q 036440 61 KYLADDFFQS---IPP-VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKI 136 (181)
Q Consensus 61 ~~~~gDff~~---~P~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~ 136 (181)
+++.+|+++. .|. .|+| +++++||+|+|+++.++|++
T Consensus 232 ~~~~~d~~~~~~~~~~~~D~v---------------------------------------~~~~vlh~~~~~~~~~~l~~ 272 (352)
T 3mcz_A 232 EFFEKNLLDARNFEGGAADVV---------------------------------------MLNDCLHYFDAREAREVIGH 272 (352)
T ss_dssp EEEECCTTCGGGGTTCCEEEE---------------------------------------EEESCGGGSCHHHHHHHHHH
T ss_pred EEEeCCcccCcccCCCCccEE---------------------------------------EEecccccCCHHHHHHHHHH
Confidence 9999999976 454 7999 99999999999999999999
Q ss_pred HHHHhccCC---------------------------------ccCCHHHHHHHHHhCCCeEEEEEEcCCCCeEEEEEC
Q 036440 137 CREAITSKA---------------------------------KLSTEKELESLFVEVHFHHYKITPLFGLPSLIEVYP 181 (181)
Q Consensus 137 ~~~a~~~~g---------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~~~ 181 (181)
++.+|+||| ++||.+||+++|++|||++++.. .+..+++.+++
T Consensus 273 ~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~--~g~~~l~~a~k 348 (352)
T 3mcz_A 273 AAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGERS--IGRYTLLIGQR 348 (352)
T ss_dssp HHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEEE--ETTEEEEEEEC
T ss_pred HHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeeec--cCceEEEEEec
Confidence 999999988 68999999999999999999843 35577887764
No 14
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.79 E-value=6.6e-19 Score=150.25 Aligned_cols=139 Identities=21% Similarity=0.350 Sum_probs=122.3
Q ss_pred ChHHHhhccccchhHHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeechhhhhhhcc-------CCCce
Q 036440 1 FNQAVASDTQTVTASLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQPHVVANLLD-------TNNLK 61 (181)
Q Consensus 1 F~~aM~~~s~~~~~~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~DlP~Vv~~a~~-------~~ri~ 61 (181)
|+++|...+.... +.+++.+ +++...+||||| ++|+++++.+|+|.+++.+.. .+|++
T Consensus 160 f~~~~~~~~~~~~-~~l~~~~--~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~ 236 (360)
T 1tw3_A 160 FDSLLACDQDVAF-DAPAAAY--DWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVD 236 (360)
T ss_dssp HHHHHTTTTTTTT-HHHHHHS--CCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEE
T ss_pred HHHHHHHHHHHhH-HHHHHhC--CCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceE
Confidence 5677887777666 7889999 788889999999 789999999999988886642 45999
Q ss_pred EEecCCCCCCCC-cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHH
Q 036440 62 YLADDFFQSIPP-VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREA 140 (181)
Q Consensus 62 ~~~gDff~~~P~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a 140 (181)
++.+|+++++|. .|+| ++.++||+|+|+++.++|++++.+
T Consensus 237 ~~~~d~~~~~~~~~D~v---------------------------------------~~~~vl~~~~~~~~~~~l~~~~~~ 277 (360)
T 1tw3_A 237 VVEGDFFEPLPRKADAI---------------------------------------ILSFVLLNWPDHDAVRILTRCAEA 277 (360)
T ss_dssp EEECCTTSCCSSCEEEE---------------------------------------EEESCGGGSCHHHHHHHHHHHHHT
T ss_pred EEeCCCCCCCCCCccEE---------------------------------------EEcccccCCCHHHHHHHHHHHHHh
Confidence 999999998887 7998 999999999999999999999999
Q ss_pred hccCC--------------------------------ccCCHHHHHHHHHhCCCeEEEEEEcCCC-----CeEEEEEC
Q 036440 141 ITSKA--------------------------------KLSTEKELESLFVEVHFHHYKITPLFGL-----PSLIEVYP 181 (181)
Q Consensus 141 ~~~~g--------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~-----~~viE~~~ 181 (181)
++||| +++|.+||+++|+++||+++++.+.++. .++||++|
T Consensus 278 L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 278 LEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAP 355 (360)
T ss_dssp EEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred cCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEeCCCCcccCccEEEEEEe
Confidence 99888 3478999999999999999999988765 78999975
No 15
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.78 E-value=1.5e-18 Score=148.42 Aligned_cols=139 Identities=16% Similarity=0.262 Sum_probs=121.6
Q ss_pred ChHHHhhccccchhHHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeechhhhhhhcc-------CCCce
Q 036440 1 FNQAVASDTQTVTASLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQPHVVANLLD-------TNNLK 61 (181)
Q Consensus 1 F~~aM~~~s~~~~~~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~DlP~Vv~~a~~-------~~ri~ 61 (181)
|+++|...+.... +.+++.+ +++...+||||| ++|+++++.+|+|.+++.+.. .+|++
T Consensus 159 f~~~~~~~~~~~~-~~~~~~~--~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~ 235 (374)
T 1qzz_A 159 FDALMSCDEDLAY-EAPADAY--DWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVT 235 (374)
T ss_dssp HHHTCGGGSTTTT-HHHHHTS--CCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEE
T ss_pred HHHHHHHhhHhHH-HHHHHhC--CCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceE
Confidence 4567777766666 7888888 788889999999 789999999999988887652 45999
Q ss_pred EEecCCCCCCCC-cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHH
Q 036440 62 YLADDFFQSIPP-VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREA 140 (181)
Q Consensus 62 ~~~gDff~~~P~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a 140 (181)
++.+|+++++|. .|+| ++++++|+|+|+++.++|++++.+
T Consensus 236 ~~~~d~~~~~~~~~D~v---------------------------------------~~~~vl~~~~~~~~~~~l~~~~~~ 276 (374)
T 1qzz_A 236 VAEGDFFKPLPVTADVV---------------------------------------LLSFVLLNWSDEDALTILRGCVRA 276 (374)
T ss_dssp EEECCTTSCCSCCEEEE---------------------------------------EEESCGGGSCHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcCCCCCCEE---------------------------------------EEeccccCCCHHHHHHHHHHHHHh
Confidence 999999998887 7998 999999999999999999999999
Q ss_pred hccCC---------------------------------ccCCHHHHHHHHHhCCCeEEEEEEcCCCC-----eEEEEEC
Q 036440 141 ITSKA---------------------------------KLSTEKELESLFVEVHFHHYKITPLFGLP-----SLIEVYP 181 (181)
Q Consensus 141 ~~~~g---------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~~-----~viE~~~ 181 (181)
++||| +++|.+||+++|+++||+++++.+.++.. ++||++|
T Consensus 277 L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 277 LEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASERTSGSTTLPFDFSILEFTA 355 (374)
T ss_dssp EEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred cCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEECCCCcccCCcEEEEEEE
Confidence 99888 23699999999999999999999988877 9999874
No 16
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.76 E-value=6.4e-18 Score=141.93 Aligned_cols=138 Identities=16% Similarity=0.182 Sum_probs=118.7
Q ss_pred ChHHHhhccccchhHHHHHHhhhhh--cCCCeEEEec------------CCCCceEEEeechhhhhhhcc-------CCC
Q 036440 1 FNQAVASDTQTVTASLALKYCKQIF--ERLGSLVDVG------------AFPCVKCTEFDQPHVVANLLD-------TNN 59 (181)
Q Consensus 1 F~~aM~~~s~~~~~~~~l~~~~~d~--~~~~~lvDvG------------~~P~l~~~~~DlP~Vv~~a~~-------~~r 59 (181)
|+++|...+.... ..+++.+ ++ +...+|+||| ++|+.+++.+|++.+++.+.. .+|
T Consensus 140 ~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~ 216 (335)
T 2r3s_A 140 FAKAMSPMMANPA-QLIAQLV--NENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASR 216 (335)
T ss_dssp HHHHSGGGGHHHH-HHHHHHH--TC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGG
T ss_pred HHHHHHHHHhhhH-HHHHHhc--ccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcc
Confidence 4567776666555 7788888 67 8889999999 789999999999987776642 468
Q ss_pred ceEEecCCCC-CCCC-cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHH
Q 036440 60 LKYLADDFFQ-SIPP-VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKIC 137 (181)
Q Consensus 60 i~~~~gDff~-~~P~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~ 137 (181)
++++.+|+++ ++|. .|+| ++++++|+|+|+++.++|+++
T Consensus 217 v~~~~~d~~~~~~~~~~D~v---------------------------------------~~~~~l~~~~~~~~~~~l~~~ 257 (335)
T 2r3s_A 217 YHTIAGSAFEVDYGNDYDLV---------------------------------------LLPNFLHHFDVATCEQLLRKI 257 (335)
T ss_dssp EEEEESCTTTSCCCSCEEEE---------------------------------------EEESCGGGSCHHHHHHHHHHH
T ss_pred eEEEecccccCCCCCCCcEE---------------------------------------EEcchhccCCHHHHHHHHHHH
Confidence 9999999997 5665 7998 999999999999999999999
Q ss_pred HHHhccCC---------------------------------ccCCHHHHHHHHHhCCCeEEEEEEcCCCCeEEEEE
Q 036440 138 REAITSKA---------------------------------KLSTEKELESLFVEVHFHHYKITPLFGLPSLIEVY 180 (181)
Q Consensus 138 ~~a~~~~g---------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~~ 180 (181)
+.+++||| +++|.+||+++|+++||+.+++.+..+..++|+++
T Consensus 258 ~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~~~~~~~~~i~~~ 333 (335)
T 2r3s_A 258 KTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLHSLPTTQQQVIVA 333 (335)
T ss_dssp HHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEECCTTSSSEEEEE
T ss_pred HHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEEECCCCceeEEEe
Confidence 99999888 56789999999999999999999998877877764
No 17
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.12 E-value=7.4e-10 Score=87.88 Aligned_cols=112 Identities=15% Similarity=0.206 Sum_probs=91.2
Q ss_pred CCCeEEEec------------CCCCceEEEeec-hhhhhhhcc----CCCceEEecCCCCC-CCC-cceEeccccchhhh
Q 036440 27 RLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD----TNNLKYLADDFFQS-IPP-VCMIPLRLGYSHIK 87 (181)
Q Consensus 27 ~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~----~~ri~~~~gDff~~-~P~-~d~~~~~~~~~~~~ 87 (181)
.-.+|||+| ++|+.+.+.+|+ |..++.+.. .++++++.+|+.+. .+. .|++
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v---------- 113 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMV---------- 113 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEE----------
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEE----------
Confidence 447999999 789999999999 777766642 34899999999874 332 6888
Q ss_pred HHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC----------------------
Q 036440 88 IMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA---------------------- 145 (181)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g---------------------- 145 (181)
++..++|.+++.+..++|++++..++|||
T Consensus 114 -----------------------------~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 164 (234)
T 3dtn_A 114 -----------------------------VSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTI 164 (234)
T ss_dssp -----------------------------EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHH
T ss_pred -----------------------------EEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHH
Confidence 88999999999999999999999999999
Q ss_pred -------------------------ccCCHHHHHHHHHhCCCeEEEEEEcCCCCeEE
Q 036440 146 -------------------------KLSTEKELESLFVEVHFHHYKITPLFGLPSLI 177 (181)
Q Consensus 146 -------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~~~vi 177 (181)
+..|.+|+.++|++|||+.++++......+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~~~ 221 (234)
T 3dtn_A 165 WRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCIYKYYQFAVM 221 (234)
T ss_dssp HHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTTCEEEEEEEEETTEEEE
T ss_pred HHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcCCCceeeeeeecceeEE
Confidence 22577899999999999999987554433333
No 18
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.08 E-value=1.6e-09 Score=90.65 Aligned_cols=114 Identities=13% Similarity=0.233 Sum_probs=90.9
Q ss_pred hcCCCeEEEec--------------CCCCceEEEeec-hhhhhhhc-------cCCCceEEecCCCC-CCCCcceEeccc
Q 036440 25 FERLGSLVDVG--------------AFPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQ-SIPPVCMIPLRL 81 (181)
Q Consensus 25 ~~~~~~lvDvG--------------~~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~-~~P~~d~~~~~~ 81 (181)
.+.-.+|+|+| ..|+++.+.+|+ |..++.++ ...+|+++.+|+.+ +.+..|++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v---- 143 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMV---- 143 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEE----
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccc----
Confidence 34557899999 458899999998 66777654 25689999999986 34557888
Q ss_pred cchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC----------------
Q 036440 82 GYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA---------------- 145 (181)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g---------------- 145 (181)
++..+||..++++..++|++++..++|||
T Consensus 144 -----------------------------------~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~ 188 (261)
T 4gek_A 144 -----------------------------------VLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVG 188 (261)
T ss_dssp -----------------------------------EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHH
T ss_pred -----------------------------------eeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHH
Confidence 77889999999998999999999999999
Q ss_pred --------------------------------ccCCHHHHHHHHHhCCCeEEEEE-EcCCCCeEE
Q 036440 146 --------------------------------KLSTEKELESLFVEVHFHHYKIT-PLFGLPSLI 177 (181)
Q Consensus 146 --------------------------------~eRt~~E~~~Ll~~aGf~~~~i~-~~~~~~~vi 177 (181)
...|.+|+.++|++|||+.++++ ......++|
T Consensus 189 ~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AGF~~ve~~fq~~nF~~~i 253 (261)
T 4gek_A 189 ELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAGFEHSELWFQCFNFGSLV 253 (261)
T ss_dssp HHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHTCSEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCCHHHHHHHHHHcCCCeEEEEEEeccEEEEE
Confidence 23688999999999999999886 333334444
No 19
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.05 E-value=1.2e-09 Score=85.60 Aligned_cols=115 Identities=16% Similarity=0.163 Sum_probs=92.1
Q ss_pred cCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-----CCCceEEecCCCC-CCCC--cceEeccccch
Q 036440 26 ERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQ-SIPP--VCMIPLRLGYS 84 (181)
Q Consensus 26 ~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~-~~P~--~d~~~~~~~~~ 84 (181)
....+|||+| .+| +.+.+|+ |..++.+.. ..+++++.+|+.+ ++|. .|++
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v------- 107 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYV------- 107 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEE-------
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEE-------
Confidence 3467999999 555 7888888 777776643 3789999999987 3443 6888
Q ss_pred hhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC--------------c----
Q 036440 85 HIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA--------------K---- 146 (181)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g--------------~---- 146 (181)
+...++|.+..++..++|++++..++||| .
T Consensus 108 --------------------------------~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~ 155 (227)
T 1ve3_A 108 --------------------------------IFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKES 155 (227)
T ss_dssp --------------------------------EEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC-
T ss_pred --------------------------------EEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhh
Confidence 77788888888888899999999999998 0
Q ss_pred -----------------cCC---H----------------HHHHHHHHhCCCeEEEEEEcCCCCeEEEEEC
Q 036440 147 -----------------LST---E----------------KELESLFVEVHFHHYKITPLFGLPSLIEVYP 181 (181)
Q Consensus 147 -----------------eRt---~----------------~E~~~Ll~~aGf~~~~i~~~~~~~~viE~~~ 181 (181)
+++ . +++.++|+++||+.+++.++.+...+||.+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~l~~~GF~~v~~~~~~~~~~~i~~~~ 226 (227)
T 1ve3_A 156 LVVGQKYWISKVIPDQEERTVVIEFKSEQDSFRVRFNVWGKTGVELLAKLYFTKEAEEKVGNYSYLTVYNP 226 (227)
T ss_dssp --------CCEEEEETTTTEEEEEC-----CCEEEEECCCHHHHHHHHTTTEEEEEEEEETTTEEEEEEEE
T ss_pred hhcccceeecccccCccccEEEEEeccchhhheeehhhhchHHHHHHHHHhhhHHHHHHhCCceeEEeeCC
Confidence 000 0 6899999999999999999987789999987
No 20
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.89 E-value=2.2e-08 Score=78.35 Aligned_cols=122 Identities=16% Similarity=0.135 Sum_probs=96.6
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------C-CCCceEEEeec-hhhhhhhcc------CCCceEEecCCCC-CCCC
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------A-FPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQ-SIPP 73 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~-~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~-~~P~ 73 (181)
..+++.+ +...-.+|||+| . .|..+.+.+|. |..++.+.. .+++++..+|+.+ ++|.
T Consensus 27 ~~~~~~~--~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 27 EKVLKEF--GLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHHH--TCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCS
T ss_pred HHHHHHh--CCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCC
Confidence 5677777 577778999999 3 37889999998 677766542 2489999999976 3443
Q ss_pred --cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------
Q 036440 74 --VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------ 145 (181)
Q Consensus 74 --~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------ 145 (181)
.|++ ++..++|.+.|. .++|++++..++|||
T Consensus 105 ~~fD~v---------------------------------------~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 105 NTVDFI---------------------------------------FMAFTFHELSEP--LKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp SCEEEE---------------------------------------EEESCGGGCSSH--HHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeeEE---------------------------------------EeehhhhhcCCH--HHHHHHHHHHhCCCeEEEEEE
Confidence 5888 888999999754 679999999999999
Q ss_pred -------------ccCCHHHHHHHHHhCCCeEEEEEEcCCCCeEEEE
Q 036440 146 -------------KLSTEKELESLFVEVHFHHYKITPLFGLPSLIEV 179 (181)
Q Consensus 146 -------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~ 179 (181)
...|.+++..+++++||+++++....+....+.+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~ 190 (219)
T 3dh0_A 144 WKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGKYCFGVYA 190 (219)
T ss_dssp ECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETTTEEEEEE
T ss_pred ecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCCceEEEEE
Confidence 4457899999999999999999887765444443
No 21
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.81 E-value=9.7e-08 Score=74.03 Aligned_cols=113 Identities=13% Similarity=0.181 Sum_probs=88.4
Q ss_pred HHHHHHhhhhhcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc--CCCceEEecCCCCCCCC--cceEe
Q 036440 15 SLALKYCKQIFERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD--TNNLKYLADDFFQSIPP--VCMIP 78 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~--~~ri~~~~gDff~~~P~--~d~~~ 78 (181)
..+++... .+..-.+|||+| +. +.+.+.+|+ |..++.+.. .++++++.+|+.+..|. .|++
T Consensus 35 ~~~~~~l~-~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v- 111 (218)
T 3ou2_A 35 PAALERLR-AGNIRGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAV- 111 (218)
T ss_dssp HHHHHHHT-TTTSCSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEE-
T ss_pred HHHHHHHh-cCCCCCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEE-
Confidence 34555553 355557999999 22 568899998 666766653 36899999999876544 6888
Q ss_pred ccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCCc------------
Q 036440 79 LRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKAK------------ 146 (181)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g~------------ 146 (181)
++..++|.+++++..++|++++..++|||+
T Consensus 112 --------------------------------------~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 153 (218)
T 3ou2_A 112 --------------------------------------FFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERR 153 (218)
T ss_dssp --------------------------------------EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC--
T ss_pred --------------------------------------EEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccc
Confidence 889999999999999999999999999980
Q ss_pred ----------------------------cCCHHHHHHHHHhCCCeEEEEE
Q 036440 147 ----------------------------LSTEKELESLFVEVHFHHYKIT 168 (181)
Q Consensus 147 ----------------------------eRt~~E~~~Ll~~aGf~~~~i~ 168 (181)
..|.+++.++|+++||++....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~ 203 (218)
T 3ou2_A 154 LEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSVDE 203 (218)
T ss_dssp ----------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred cchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEeee
Confidence 2389999999999999954433
No 22
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.79 E-value=2.8e-08 Score=79.23 Aligned_cols=109 Identities=17% Similarity=0.214 Sum_probs=87.8
Q ss_pred hcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc----CCCceEEecCCCCC-CCC--cceEeccccch
Q 036440 25 FERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD----TNNLKYLADDFFQS-IPP--VCMIPLRLGYS 84 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~----~~ri~~~~gDff~~-~P~--~d~~~~~~~~~ 84 (181)
...-.+||||| +. ..+.+.+|. |..++.+.. .++++++.+|+.+. +|. .|++
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v------- 162 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLI------- 162 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEE-------
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEE-------
Confidence 34567999999 22 346889997 667766643 26899999998763 343 5888
Q ss_pred hhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------------------
Q 036440 85 HIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------------------- 145 (181)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------------------- 145 (181)
+...+||.+++++..++|++++..++|||
T Consensus 163 --------------------------------~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~ 210 (254)
T 1xtp_A 163 --------------------------------VIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKE 210 (254)
T ss_dssp --------------------------------EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETT
T ss_pred --------------------------------EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceeccc
Confidence 88999999999999999999999999999
Q ss_pred ---ccCCHHHHHHHHHhCCCeEEEEEEcCCC
Q 036440 146 ---KLSTEKELESLFVEVHFHHYKITPLFGL 173 (181)
Q Consensus 146 ---~eRt~~E~~~Ll~~aGf~~~~i~~~~~~ 173 (181)
..+|.+++.++|+++||+++++....+.
T Consensus 211 ~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~ 241 (254)
T 1xtp_A 211 DSSLTRSDIHYKRLFNESGVRVVKEAFQEEW 241 (254)
T ss_dssp TTEEEBCHHHHHHHHHHHTCCEEEEEECTTC
T ss_pred CCcccCCHHHHHHHHHHCCCEEEEeeecCCC
Confidence 2468999999999999999998766543
No 23
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.79 E-value=1e-07 Score=77.14 Aligned_cols=117 Identities=13% Similarity=0.035 Sum_probs=89.1
Q ss_pred hcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc-CCCceEEecCCCCC-CCC-cceEeccccchhhhHHh
Q 036440 25 FERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD-TNNLKYLADDFFQS-IPP-VCMIPLRLGYSHIKIMI 90 (181)
Q Consensus 25 ~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~-~~ri~~~~gDff~~-~P~-~d~~~~~~~~~~~~~~~ 90 (181)
.....+|||+| +--..+.+.+|+ |..++.+.. ..+++++.+|+.+. .+. .|++
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v------------- 114 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAV------------- 114 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEE-------------
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEE-------------
Confidence 34557999999 212447899998 777777654 45899999999873 333 6888
Q ss_pred hhhhhhhcCCCccchhhhhhcccccceeee-eeccCCh-HHHHHHHHHHHHHhccCCc----------------------
Q 036440 91 AFFIRLVVGRGRLHIFSWLNFMKRVINMQI-IIHVFGD-EESVKILKICREAITSKAK---------------------- 146 (181)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-iLHdw~D-~~~~~iL~~~~~a~~~~g~---------------------- 146 (181)
+... +||.+.+ ++..++|++++..++|||+
T Consensus 115 --------------------------~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3pfg_A 115 --------------------------TCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTV 168 (263)
T ss_dssp --------------------------EECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEE
T ss_pred --------------------------EEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhcccccccccee
Confidence 6665 8888755 6777999999999999880
Q ss_pred ---------------------------------------------cCCHHHHHHHHHhCCCeEEEEEEcCCCCeEEEEE
Q 036440 147 ---------------------------------------------LSTEKELESLFVEVHFHHYKITPLFGLPSLIEVY 180 (181)
Q Consensus 147 ---------------------------------------------eRt~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~~ 180 (181)
..|.+|++++|++|||+++++...++...++.++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~ 247 (263)
T 3pfg_A 169 EAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGL 247 (263)
T ss_dssp EETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEE
T ss_pred ccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEe
Confidence 1278999999999999999998776666666554
No 24
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.78 E-value=1.3e-07 Score=73.89 Aligned_cols=123 Identities=11% Similarity=0.160 Sum_probs=93.3
Q ss_pred HHHHHhhhhhcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc--CCCceEEecCCCCC-CC-CcceEecc
Q 036440 16 LALKYCKQIFERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD--TNNLKYLADDFFQS-IP-PVCMIPLR 80 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~--~~ri~~~~gDff~~-~P-~~d~~~~~ 80 (181)
.+++.. ....-.+|||+| +--+.+.+.+|. |..++.+.. .++++++.+|+.+. .+ ..|++
T Consensus 36 ~~l~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v--- 110 (220)
T 3hnr_A 36 DILEDV--VNKSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTI--- 110 (220)
T ss_dssp HHHHHH--HHTCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEE---
T ss_pred HHHHHh--hccCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEE---
Confidence 455655 345667999999 112668999998 566665543 25899999999873 33 36888
Q ss_pred ccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC---------------
Q 036440 81 LGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA--------------- 145 (181)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g--------------- 145 (181)
+...++|.+++.+..++|++++..++|||
T Consensus 111 ------------------------------------~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 154 (220)
T 3hnr_A 111 ------------------------------------VSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAY 154 (220)
T ss_dssp ------------------------------------EEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHH
T ss_pred ------------------------------------EECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHH
Confidence 88999999999999999999999999999
Q ss_pred ----------------------ccCCHHHHHHHHHhCCCeEEEEEEcCCCCeEEEEE
Q 036440 146 ----------------------KLSTEKELESLFVEVHFHHYKITPLFGLPSLIEVY 180 (181)
Q Consensus 146 ----------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~~ 180 (181)
.-.|.++++++|+++||+++.+... +..-++++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~-~~~w~~~~~ 210 (220)
T 3hnr_A 155 DKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRLN-HFVWVMEAT 210 (220)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEECS-SSEEEEEEE
T ss_pred HHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeecc-ceEEEEeeh
Confidence 1227899999999999987765443 445555543
No 25
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.78 E-value=5.3e-08 Score=77.72 Aligned_cols=106 Identities=17% Similarity=0.311 Sum_probs=87.6
Q ss_pred hcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc----CCCceEEecCCCC-CCCC--cceEeccccch
Q 036440 25 FERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD----TNNLKYLADDFFQ-SIPP--VCMIPLRLGYS 84 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~----~~ri~~~~gDff~-~~P~--~d~~~~~~~~~ 84 (181)
...-.+|||+| ++ +.+.+.+|+ |..++.+.. .++++++.+|+.+ ++|. .|++
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v------- 124 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLI------- 124 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEE-------
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEE-------
Confidence 44557999999 34 678999998 566666543 2799999999986 3443 5888
Q ss_pred hhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------------------
Q 036440 85 HIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------------------- 145 (181)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------------------- 145 (181)
+...++|.+++++..++|++++..++|||
T Consensus 125 --------------------------------~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~ 172 (266)
T 3ujc_A 125 --------------------------------YSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEF 172 (266)
T ss_dssp --------------------------------EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHH
T ss_pred --------------------------------eHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHH
Confidence 88999999999999999999999999999
Q ss_pred ---------ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 ---------KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 ---------~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
...|.+++..+|+++||+++++...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 206 (266)
T 3ujc_A 173 KEYVKQRKYTLITVEEYADILTACNFKNVVSKDL 206 (266)
T ss_dssp HHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEeC
Confidence 2468999999999999999988754
No 26
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.77 E-value=3.3e-08 Score=78.69 Aligned_cols=105 Identities=15% Similarity=0.154 Sum_probs=88.3
Q ss_pred CeEEEec----------CCCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCCCCC--cceEeccccchhhhH
Q 036440 29 GSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQSIPP--VCMIPLRLGYSHIKI 88 (181)
Q Consensus 29 ~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~~P~--~d~~~~~~~~~~~~~ 88 (181)
.+|||+| +-++.+.+.+|+ |..++.+.. .++++++.+|+.+..|. .|++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v----------- 136 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLI----------- 136 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEE-----------
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEE-----------
Confidence 5899999 668889999998 666665542 35799999999985444 6888
Q ss_pred HhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----------------ccCCHH
Q 036440 89 MIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-----------------KLSTEK 151 (181)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-----------------~eRt~~ 151 (181)
+...++|.+++++..++|++++..++||| ...|.+
T Consensus 137 ----------------------------~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~ 188 (235)
T 3lcc_A 137 ----------------------------FDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVS 188 (235)
T ss_dssp ----------------------------EEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHH
T ss_pred ----------------------------EEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHH
Confidence 88999999999999999999999999999 225899
Q ss_pred HHHHHHHhCCCeEEEEEEcCC
Q 036440 152 ELESLFVEVHFHHYKITPLFG 172 (181)
Q Consensus 152 E~~~Ll~~aGf~~~~i~~~~~ 172 (181)
+++++|+++||+++.+...+.
T Consensus 189 ~~~~~l~~~Gf~~~~~~~~~~ 209 (235)
T 3lcc_A 189 TFEEVLVPIGFKAVSVEENPH 209 (235)
T ss_dssp HHHHHHGGGTEEEEEEEECTT
T ss_pred HHHHHHHHcCCeEEEEEecCC
Confidence 999999999999999886653
No 27
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.76 E-value=1.4e-08 Score=78.38 Aligned_cols=103 Identities=13% Similarity=0.166 Sum_probs=80.7
Q ss_pred eEEEec-----------CCCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCC-CCCC--cceEeccccchhhh
Q 036440 30 SLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQ-SIPP--VCMIPLRLGYSHIK 87 (181)
Q Consensus 30 ~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~-~~P~--~d~~~~~~~~~~~~ 87 (181)
+|||+| +.|..+.+.+|. |..++.+.. .++++++.+|+.+ ++|. .|++
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v---------- 115 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLI---------- 115 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEE----------
T ss_pred EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEE----------
Confidence 999999 338889999998 676665542 4689999999987 4553 5888
Q ss_pred HHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC----------------------
Q 036440 88 IMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA---------------------- 145 (181)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g---------------------- 145 (181)
++..++|.+.| ..++|++++..++|||
T Consensus 116 -----------------------------~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~ 164 (219)
T 3dlc_A 116 -----------------------------VSRGSVFFWED--VATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMI 164 (219)
T ss_dssp -----------------------------EEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHH
T ss_pred -----------------------------EECchHhhccC--HHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHH
Confidence 77788888854 3468888888888888
Q ss_pred --------------ccCCHHHHHHHHHhCCCeEEEEEEcCCC
Q 036440 146 --------------KLSTEKELESLFVEVHFHHYKITPLFGL 173 (181)
Q Consensus 146 --------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~ 173 (181)
...|.++++++|+++||+.+++.+....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~ 206 (219)
T 3dlc_A 165 RKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEIILGDEG 206 (219)
T ss_dssp HHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEEEETTE
T ss_pred HhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEEecCCc
Confidence 2235699999999999999998876543
No 28
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.75 E-value=5.4e-08 Score=81.63 Aligned_cols=99 Identities=18% Similarity=0.265 Sum_probs=81.6
Q ss_pred CCCeEEEec---------------CCCCceEEEeec-hhhhhhhcc----CCCceEEecCCCCC------------CC--
Q 036440 27 RLGSLVDVG---------------AFPCVKCTEFDQ-PHVVANLLD----TNNLKYLADDFFQS------------IP-- 72 (181)
Q Consensus 27 ~~~~lvDvG---------------~~P~l~~~~~Dl-P~Vv~~a~~----~~ri~~~~gDff~~------------~P-- 72 (181)
...++|||| .+|+.+.+.+|+ |.+++.++. .++++++.+|+++. +|
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 457999999 358899999999 888887653 47999999999862 22
Q ss_pred CcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------
Q 036440 73 PVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------- 145 (181)
Q Consensus 73 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------- 145 (181)
..|++ ++..+||.++|++..++|++++.+++|||
T Consensus 157 ~~d~v---------------------------------------~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 157 RPAAI---------------------------------------MLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp SCCEE---------------------------------------EETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCEEE---------------------------------------EEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 35666 88889999999888999999999999998
Q ss_pred ----------------------ccCCHHHHHHHHHhCCCeEEE
Q 036440 146 ----------------------KLSTEKELESLFVEVHFHHYK 166 (181)
Q Consensus 146 ----------------------~eRt~~E~~~Ll~~aGf~~~~ 166 (181)
+.||.+|++++| +||+++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 198 VDTGLPAQQKLARITRENLGEGWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp BCSSCHHHHHHHHHHHHHHSCCCCBCHHHHHHTT--TTCEECT
T ss_pred cCcchHHHHHHHHHHHhcCCCCccCCHHHHHHHh--CCCeEcc
Confidence 357999999999 5998764
No 29
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.72 E-value=1.4e-07 Score=78.19 Aligned_cols=115 Identities=13% Similarity=0.133 Sum_probs=88.4
Q ss_pred CCeEEEec----------CCCCceEEEeec-hhhhhhhcc-----C----CCceEEecCCCCC-CCC-cceEeccccchh
Q 036440 28 LGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD-----T----NNLKYLADDFFQS-IPP-VCMIPLRLGYSH 85 (181)
Q Consensus 28 ~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~-----~----~ri~~~~gDff~~-~P~-~d~~~~~~~~~~ 85 (181)
-.+||||| +--+.+.+.+|+ |..++.+.. . .+++++.+|+.+. .+. .|++
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v-------- 154 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTV-------- 154 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEE--------
T ss_pred CCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEE--------
Confidence 35999999 222568899998 667766642 1 7899999999873 333 5766
Q ss_pred hhHHhhhhhhhhcCCCccchhhhhhcccccce-eeeeeccCChHHHHHHHHHHHHHhccCC-----------c-------
Q 036440 86 IKIMIAFFIRLVVGRGRLHIFSWLNFMKRVIN-MQIIIHVFGDEESVKILKICREAITSKA-----------K------- 146 (181)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~iLHdw~D~~~~~iL~~~~~a~~~~g-----------~------- 146 (181)
+ ...++|.+++++..++|++++..++||| .
T Consensus 155 -------------------------------~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~ 203 (299)
T 3g2m_A 155 -------------------------------VISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLER 203 (299)
T ss_dssp -------------------------------EECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC
T ss_pred -------------------------------EECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhc
Confidence 4 4477888888889999999999999998 0
Q ss_pred -----------------------------------------------cCCHHHHHHHHHhCCCeEEEEEEcCCC------
Q 036440 147 -----------------------------------------------LSTEKELESLFVEVHFHHYKITPLFGL------ 173 (181)
Q Consensus 147 -----------------------------------------------eRt~~E~~~Ll~~aGf~~~~i~~~~~~------ 173 (181)
..|.+|++++|++|||+++++.+....
T Consensus 204 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g~~~~~ 283 (299)
T 3g2m_A 204 KQELPGRSGRRYVLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGGAGRKD 283 (299)
T ss_dssp -------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTSSSSCC
T ss_pred cceeecCCCcEEEEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCCCCccc
Confidence 139999999999999999999877632
Q ss_pred CeEEEEEC
Q 036440 174 PSLIEVYP 181 (181)
Q Consensus 174 ~~viE~~~ 181 (181)
..+||+.+
T Consensus 284 ~~lvea~~ 291 (299)
T 3g2m_A 284 MVLVEAVM 291 (299)
T ss_dssp EEEEEEEC
T ss_pred eeeeehhh
Confidence 25777753
No 30
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.69 E-value=1.7e-07 Score=78.17 Aligned_cols=107 Identities=12% Similarity=0.130 Sum_probs=85.3
Q ss_pred hcCCCeEEEec-------------CCCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCC-CCC-cceEeccc
Q 036440 25 FERLGSLVDVG-------------AFPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQS-IPP-VCMIPLRL 81 (181)
Q Consensus 25 ~~~~~~lvDvG-------------~~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~-~P~-~d~~~~~~ 81 (181)
+..-.+|+||| .+|+.+.+.+|+ |..++.+.. .+|++++.+|+.+. .|. .|++
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v---- 191 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLL---- 191 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEE----
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEE----
Confidence 45667899999 478999999999 777766542 45799999999873 333 6888
Q ss_pred cchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCC-hHHHHHHHHHHHHHhccCCc--------------
Q 036440 82 GYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFG-DEESVKILKICREAITSKAK-------------- 146 (181)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~-D~~~~~iL~~~~~a~~~~g~-------------- 146 (181)
+...++|.++ ++...++|++++..++|||+
T Consensus 192 -----------------------------------~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 236 (305)
T 3ocj_A 192 -----------------------------------TSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSP 236 (305)
T ss_dssp -----------------------------------ECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCT
T ss_pred -----------------------------------EECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccc
Confidence 7777888874 55556899999999999880
Q ss_pred -------------------------------cCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 147 -------------------------------LSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 147 -------------------------------eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
.+|.+++.++|+++||+++++...
T Consensus 237 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 291 (305)
T 3ocj_A 237 DSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFEDD 291 (305)
T ss_dssp TCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEECC
T ss_pred cccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEcc
Confidence 158999999999999999998854
No 31
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.67 E-value=1.7e-07 Score=75.63 Aligned_cols=111 Identities=12% Similarity=0.203 Sum_probs=82.3
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCC-CCCC-
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQ-SIPP- 73 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~-~~P~- 73 (181)
..+++.. ......+||||| .++ +.+.+|+ |..++.+.. .++++++.+|+.+ ++|.
T Consensus 27 ~~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~ 102 (260)
T 1vl5_A 27 AKLMQIA--ALKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDE 102 (260)
T ss_dssp HHHHHHH--TCCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTT
T ss_pred HHHHHHh--CCCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCC
Confidence 5666766 566778999999 333 8899998 666665542 2579999999976 3443
Q ss_pred -cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------
Q 036440 74 -VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------- 145 (181)
Q Consensus 74 -~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------- 145 (181)
.|++ +...++|.++|.. ++|++++..++|||
T Consensus 103 ~fD~V---------------------------------------~~~~~l~~~~d~~--~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 103 RFHIV---------------------------------------TCRIAAHHFPNPA--SFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp CEEEE---------------------------------------EEESCGGGCSCHH--HHHHHHHHHEEEEEEEEEEEE
T ss_pred CEEEE---------------------------------------EEhhhhHhcCCHH--HHHHHHHHHcCCCCEEEEEEc
Confidence 5888 6677777777653 67788888888777
Q ss_pred ------------------------ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 ------------------------KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 ------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
+..+.++|.++|+++||+++++...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 142 SAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp EBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEEe
Confidence 3467899999999999998877643
No 32
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.66 E-value=9.4e-08 Score=74.10 Aligned_cols=107 Identities=15% Similarity=0.048 Sum_probs=87.8
Q ss_pred CCeEEEec----------CCCCceEEEeec-hhhhhhhcc-CCCceEEecCCCC-CCCC--cceEeccccchhhhHHhhh
Q 036440 28 LGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD-TNNLKYLADDFFQ-SIPP--VCMIPLRLGYSHIKIMIAF 92 (181)
Q Consensus 28 ~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~-~~ri~~~~gDff~-~~P~--~d~~~~~~~~~~~~~~~~~ 92 (181)
-.+|||+| +--+.+.+.+|. |..++.+.. .++++++.+|+.+ +.|. .|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v--------------- 106 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGL--------------- 106 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEE---------------
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEE---------------
Confidence 67899999 111558899998 566666654 5689999999986 2333 5888
Q ss_pred hhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC----------------------ccCCH
Q 036440 93 FIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA----------------------KLSTE 150 (181)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g----------------------~eRt~ 150 (181)
++..++|.+++++..++|++++..++||| ...|.
T Consensus 107 ------------------------~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 162 (203)
T 3h2b_A 107 ------------------------LAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPL 162 (203)
T ss_dssp ------------------------EEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCH
T ss_pred ------------------------EehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCH
Confidence 88899999998899999999999999999 24789
Q ss_pred HHHHHHHHhCCCeEEEEEEcCCC
Q 036440 151 KELESLFVEVHFHHYKITPLFGL 173 (181)
Q Consensus 151 ~E~~~Ll~~aGf~~~~i~~~~~~ 173 (181)
+++.++|+++||+++++...++.
T Consensus 163 ~~~~~~l~~~Gf~~~~~~~~~~~ 185 (203)
T 3h2b_A 163 PELAQALETAGFQVTSSHWDPRF 185 (203)
T ss_dssp HHHHHHHHHTTEEEEEEEECTTS
T ss_pred HHHHHHHHHCCCcEEEEEecCCC
Confidence 99999999999999999876654
No 33
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.66 E-value=2.1e-07 Score=74.75 Aligned_cols=118 Identities=15% Similarity=0.237 Sum_probs=82.6
Q ss_pred ccccchhHHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCC
Q 036440 8 DTQTVTASLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFF 68 (181)
Q Consensus 8 ~s~~~~~~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff 68 (181)
.++......+++.. +...-.+|||+| .++ +.+.+|+ |..++.+.. .++++++.+|+.
T Consensus 4 ~~~~~~~~~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 79 (239)
T 1xxl_A 4 HHHHHSLGLMIKTA--ECRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAE 79 (239)
T ss_dssp --CHHHHHHHHHHH--TCCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTT
T ss_pred cccCCCcchHHHHh--CcCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccc
Confidence 33333336677777 678888999999 333 7889998 566665542 258999999986
Q ss_pred C-CCCC--cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC
Q 036440 69 Q-SIPP--VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA 145 (181)
Q Consensus 69 ~-~~P~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g 145 (181)
+ ++|. .|++ +...++|.|+|. .++|++++..++|||
T Consensus 80 ~~~~~~~~fD~v---------------------------------------~~~~~l~~~~~~--~~~l~~~~~~LkpgG 118 (239)
T 1xxl_A 80 SLPFPDDSFDII---------------------------------------TCRYAAHHFSDV--RKAVREVARVLKQDG 118 (239)
T ss_dssp BCCSCTTCEEEE---------------------------------------EEESCGGGCSCH--HHHHHHHHHHEEEEE
T ss_pred cCCCCCCcEEEE---------------------------------------EECCchhhccCH--HHHHHHHHHHcCCCc
Confidence 5 2332 5888 556666666553 356666666666666
Q ss_pred -------------------------------ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 -------------------------------KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 -------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
+..|.++|.++|+++||+++++...
T Consensus 119 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 119 RFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQKW 174 (239)
T ss_dssp EEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEEEee
Confidence 4578999999999999998887643
No 34
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.65 E-value=7.8e-08 Score=77.17 Aligned_cols=102 Identities=13% Similarity=0.117 Sum_probs=81.2
Q ss_pred CCCeEEEec------------CCCCceEEEeec-hhhhhhhcc---CCCceEEecCCCC-CCCC--cceEeccccchhhh
Q 036440 27 RLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD---TNNLKYLADDFFQ-SIPP--VCMIPLRLGYSHIK 87 (181)
Q Consensus 27 ~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~---~~ri~~~~gDff~-~~P~--~d~~~~~~~~~~~~ 87 (181)
.-.+|||+| ..+. +.+.+|+ |..++.+.. ..+++++.+|+.+ ++|. .|++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v---------- 112 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVV---------- 112 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEE----------
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEE----------
Confidence 447899999 4443 8899998 667766643 4799999999975 3433 5888
Q ss_pred HHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------------c---------
Q 036440 88 IMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------------K--------- 146 (181)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------------~--------- 146 (181)
++..++|.+.| ..++|++++..++||| .
T Consensus 113 -----------------------------~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 161 (253)
T 3g5l_A 113 -----------------------------LSSLALHYIAS--FDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTD 161 (253)
T ss_dssp -----------------------------EEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEEC
T ss_pred -----------------------------EEchhhhhhhh--HHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceec
Confidence 88889999855 5689999999999999 0
Q ss_pred -------------------------------cCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 147 -------------------------------LSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 147 -------------------------------eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
.+|.++|.++|++|||+++++...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 162 ETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp SSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEECC
T ss_pred cCCceEEEEeccccccceEEEeeccccCccEecCHHHHHHHHHHcCCeeeeeecC
Confidence 129999999999999999998844
No 35
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.62 E-value=9.1e-08 Score=74.79 Aligned_cols=107 Identities=12% Similarity=0.104 Sum_probs=86.3
Q ss_pred hcCCCeEEEec----------CCCCceEEEeec-hhhhhhhccCCCceEEecCCCCCCCC--cceEeccccchhhhHHhh
Q 036440 25 FERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLDTNNLKYLADDFFQSIPP--VCMIPLRLGYSHIKIMIA 91 (181)
Q Consensus 25 ~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~~~ri~~~~gDff~~~P~--~d~~~~~~~~~~~~~~~~ 91 (181)
+..-.+|||+| +-.+.+.+.+|+ |..++.+....++++..+|+.+.-+. .|++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v-------------- 106 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAV-------------- 106 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEE--------------
T ss_pred cCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEE--------------
Confidence 44557999999 222568899998 66777666544788889998753232 5888
Q ss_pred hhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC---------------------ccCCH
Q 036440 92 FFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA---------------------KLSTE 150 (181)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g---------------------~eRt~ 150 (181)
+...+||.+++++..++|++++..++||| ...|.
T Consensus 107 -------------------------~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 161 (211)
T 3e23_A 107 -------------------------WAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSE 161 (211)
T ss_dssp -------------------------EECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCH
T ss_pred -------------------------EecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCH
Confidence 88999999999999999999999999999 23699
Q ss_pred HHHHHHHHhCC-CeEEEEEEc
Q 036440 151 KELESLFVEVH-FHHYKITPL 170 (181)
Q Consensus 151 ~E~~~Ll~~aG-f~~~~i~~~ 170 (181)
+++..+|+++| |+++++...
T Consensus 162 ~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 162 EWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp HHHHHHHHHHCCCSEEEEEEE
T ss_pred HHHHHHHHhCCCcEEEEEEec
Confidence 99999999999 999988744
No 36
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.62 E-value=2.2e-07 Score=76.42 Aligned_cols=104 Identities=15% Similarity=0.161 Sum_probs=82.8
Q ss_pred hcCCCeEEEec------------CCCCceEEEeec-hhhhhhhc-------cCCCceEEecCCCC-CCCC--cceEeccc
Q 036440 25 FERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQ-SIPP--VCMIPLRL 81 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~-~~P~--~d~~~~~~ 81 (181)
+..-.+||||| ++ +.+.+.+|+ |..++.+. ..++++++.+|+.+ ++|. .|++
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v---- 154 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFI---- 154 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEE----
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEE----
Confidence 45667999999 33 458999998 55555443 24789999999986 3443 5888
Q ss_pred cchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC----------------
Q 036440 82 GYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA---------------- 145 (181)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g---------------- 145 (181)
+...++|.++| ..++|++++..++|||
T Consensus 155 -----------------------------------~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 197 (297)
T 2o57_A 155 -----------------------------------WSQDAFLHSPD--KLKVFQECARVLKPRGVMAITDPMKEDGIDKS 197 (297)
T ss_dssp -----------------------------------EEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGG
T ss_pred -----------------------------------EecchhhhcCC--HHHHHHHHHHHcCCCeEEEEEEeccCCCCchH
Confidence 88889999887 5789999999999998
Q ss_pred ------------ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 ------------KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 ------------~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
...|.+++.++|+++||+++++.+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 234 (297)
T 2o57_A 198 SIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTFSR 234 (297)
T ss_dssp GGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEEEC
Confidence 2358999999999999999988764
No 37
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.61 E-value=2.2e-07 Score=74.32 Aligned_cols=106 Identities=14% Similarity=0.239 Sum_probs=85.5
Q ss_pred hcCCCeEEEec----------CCCCceEEEeec-hhhhhhhccCCCceEEecCCCC---CCCC--cceEeccccchhhhH
Q 036440 25 FERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLDTNNLKYLADDFFQ---SIPP--VCMIPLRLGYSHIKI 88 (181)
Q Consensus 25 ~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~~~ri~~~~gDff~---~~P~--~d~~~~~~~~~~~~~ 88 (181)
++.-.+||||| +-.+.+.+.+|+ |..++.+... ++++.+|..+ ++|. .|++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i----------- 105 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGV----------- 105 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEE-----------
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEE-----------
Confidence 45567999999 112457899998 5666666533 9999999876 4554 6888
Q ss_pred HhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----------------------
Q 036440 89 MIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA----------------------- 145 (181)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g----------------------- 145 (181)
+...++|.+++++..++|++++..++|||
T Consensus 106 ----------------------------~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~ 157 (240)
T 3dli_A 106 ----------------------------MISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPT 157 (240)
T ss_dssp ----------------------------EEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTT
T ss_pred ----------------------------EECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCcc
Confidence 88999999999999999999999999999
Q ss_pred --ccCCHHHHHHHHHhCCCeEEEEEEcC
Q 036440 146 --KLSTEKELESLFVEVHFHHYKITPLF 171 (181)
Q Consensus 146 --~eRt~~E~~~Ll~~aGf~~~~i~~~~ 171 (181)
...|.+++.++++++||+++++....
T Consensus 158 ~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 158 HKKPVHPETLKFILEYLGFRDVKIEFFE 185 (240)
T ss_dssp CCSCCCHHHHHHHHHHHTCEEEEEEEEC
T ss_pred ccccCCHHHHHHHHHHCCCeEEEEEEec
Confidence 34688999999999999999887543
No 38
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.60 E-value=1.3e-07 Score=76.82 Aligned_cols=105 Identities=16% Similarity=0.308 Sum_probs=81.6
Q ss_pred hcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCC-CCC--cceEecccc
Q 036440 25 FERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQS-IPP--VCMIPLRLG 82 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~-~P~--~d~~~~~~~ 82 (181)
+..-.+|||+| .+|+.+.+.+|. |..++.+.. .+++++..+|+.+. .|. .|++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v----- 109 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHI----- 109 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEE-----
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEE-----
Confidence 34567999999 688999999998 666665542 35899999999863 333 6888
Q ss_pred chhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----------------
Q 036440 83 YSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA----------------- 145 (181)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g----------------- 145 (181)
+...++|.++|.. .+|++++..++|||
T Consensus 110 ----------------------------------~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 153 (276)
T 3mgg_A 110 ----------------------------------FVCFVLEHLQSPE--EALKSLKKVLKPGGTITVIEGDHGSCYFHPE 153 (276)
T ss_dssp ----------------------------------EEESCGGGCSCHH--HHHHHHHHHEEEEEEEEEEEECGGGCEEESC
T ss_pred ----------------------------------EEechhhhcCCHH--HHHHHHHHHcCCCcEEEEEEcCCCCceECCC
Confidence 7778888887765 67888888888887
Q ss_pred --------------------ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 --------------------KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 --------------------~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
...+.+++..+|+++||+++++.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 154 GKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIRVEPR 198 (276)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEEEeeE
Confidence 2355688999999999999988643
No 39
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.59 E-value=4.6e-07 Score=74.09 Aligned_cols=106 Identities=14% Similarity=0.166 Sum_probs=81.3
Q ss_pred hhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCCCCC-cceEecccc
Q 036440 24 IFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQSIPP-VCMIPLRLG 82 (181)
Q Consensus 24 d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~~P~-~d~~~~~~~ 82 (181)
+...-.+||||| +++ .+.+.+|+ |..++.+.. .+++++..+|+.+ +|. .|++
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~fD~v----- 133 (287)
T 1kpg_A 61 GLQPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ-FDEPVDRI----- 133 (287)
T ss_dssp TCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG-CCCCCSEE-----
T ss_pred CCCCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh-CCCCeeEE-----
Confidence 345557999999 444 38999998 666665532 4689999999853 554 6888
Q ss_pred chhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----------------
Q 036440 83 YSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA----------------- 145 (181)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g----------------- 145 (181)
+...++|.+++++..++|++++..++|||
T Consensus 134 ----------------------------------~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 179 (287)
T 1kpg_A 134 ----------------------------------VSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHE 179 (287)
T ss_dssp ----------------------------------EEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTT
T ss_pred ----------------------------------EEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCcccccc
Confidence 77777888877777778888888888887
Q ss_pred ------------------------ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 ------------------------KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 ------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
...|.+++.++++++||+++++...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 180 RGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp TTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEEEEC
T ss_pred ccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEEEEeC
Confidence 1248999999999999999988754
No 40
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.57 E-value=4.3e-07 Score=72.63 Aligned_cols=106 Identities=11% Similarity=0.145 Sum_probs=85.1
Q ss_pred CCeEEEec------------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCC-CCC--cceEeccccchh
Q 036440 28 LGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQS-IPP--VCMIPLRLGYSH 85 (181)
Q Consensus 28 ~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~-~P~--~d~~~~~~~~~~ 85 (181)
-.+|||+| ++ ..+.+.+|+ |..++.+.. ..+++++.+|+.+. .+. .|++
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v-------- 150 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVI-------- 150 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEE--------
T ss_pred CCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEE--------
Confidence 57999999 22 458899998 666665542 34689999998653 332 5888
Q ss_pred hhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC--------------------
Q 036440 86 IKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-------------------- 145 (181)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-------------------- 145 (181)
++..++|.+++++..++|+.++..++|||
T Consensus 151 -------------------------------~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~ 199 (241)
T 2ex4_A 151 -------------------------------WIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDS 199 (241)
T ss_dssp -------------------------------EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTT
T ss_pred -------------------------------EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCC
Confidence 88999999999999999999999999999
Q ss_pred -ccCCHHHHHHHHHhCCCeEEEEEEcCCC
Q 036440 146 -KLSTEKELESLFVEVHFHHYKITPLFGL 173 (181)
Q Consensus 146 -~eRt~~E~~~Ll~~aGf~~~~i~~~~~~ 173 (181)
..+|.+++.++|+++||+++++....+.
T Consensus 200 ~~~~~~~~~~~~l~~aGf~~~~~~~~~~~ 228 (241)
T 2ex4_A 200 SVCRDLDVVRRIICSAGLSLLAEERQENL 228 (241)
T ss_dssp EEEEBHHHHHHHHHHTTCCEEEEEECCSC
T ss_pred cccCCHHHHHHHHHHcCCeEEEeeecCCC
Confidence 1348999999999999999999876553
No 41
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.56 E-value=2.8e-07 Score=77.12 Aligned_cols=104 Identities=8% Similarity=-0.023 Sum_probs=82.9
Q ss_pred hcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhc-------cCCCceEEecCCCC-CCCC--cceEecccc
Q 036440 25 FERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQ-SIPP--VCMIPLRLG 82 (181)
Q Consensus 25 ~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~-~~P~--~d~~~~~~~ 82 (181)
+..-.+|||+| +..+.+.+.+|+ |..++.+. ..++++++.+|+.+ ++|. .|++
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V----- 189 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTAS----- 189 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEE-----
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEE-----
Confidence 55567999999 222678999998 66666554 24689999999986 3443 6888
Q ss_pred chhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----------------
Q 036440 83 YSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA----------------- 145 (181)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g----------------- 145 (181)
+...++|.++ ..++|++++..++|||
T Consensus 190 ----------------------------------~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 232 (312)
T 3vc1_A 190 ----------------------------------WNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPS 232 (312)
T ss_dssp ----------------------------------EEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCC
T ss_pred ----------------------------------EECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccccccccchh
Confidence 7888898884 7889999999999999
Q ss_pred ------------ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 ------------KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 ------------~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
..+|.+++.++|+++||+++++...
T Consensus 233 ~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 233 KWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVDL 269 (312)
T ss_dssp HHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEEC
T ss_pred HHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEeC
Confidence 2358999999999999999988764
No 42
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.55 E-value=1e-07 Score=79.69 Aligned_cols=54 Identities=15% Similarity=0.260 Sum_probs=42.6
Q ss_pred eeeeee---c-cCChHHHHHHHHHHHHHhccCC----------------------------ccCCHHHHHHHHHh--CCC
Q 036440 117 NMQIII---H-VFGDEESVKILKICREAITSKA----------------------------KLSTEKELESLFVE--VHF 162 (181)
Q Consensus 117 ~l~~iL---H-dw~D~~~~~iL~~~~~a~~~~g----------------------------~eRt~~E~~~Ll~~--aGf 162 (181)
+...++ | +|+++...++|++++..++||| ...+.+++.++|.+ +||
T Consensus 182 ~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF 261 (292)
T 3g07_A 182 LCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGF 261 (292)
T ss_dssp EEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCC
T ss_pred EEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCc
Confidence 666666 4 5699999999999999999999 22336788999999 999
Q ss_pred eEEEEEEc
Q 036440 163 HHYKITPL 170 (181)
Q Consensus 163 ~~~~i~~~ 170 (181)
+.+++...
T Consensus 262 ~~~~~~~~ 269 (292)
T 3g07_A 262 SSYELVAT 269 (292)
T ss_dssp CEEEEC--
T ss_pred eEEEEecc
Confidence 98887654
No 43
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.54 E-value=7.7e-07 Score=70.02 Aligned_cols=115 Identities=14% Similarity=0.102 Sum_probs=85.0
Q ss_pred cCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-CCCceEEecCCCCC-CCC-cceEeccccchhhhHH
Q 036440 26 ERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-TNNLKYLADDFFQS-IPP-VCMIPLRLGYSHIKIM 89 (181)
Q Consensus 26 ~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-~~ri~~~~gDff~~-~P~-~d~~~~~~~~~~~~~~ 89 (181)
....+|||+| .++ +.+.+|+ |..++.+.. .++++++.+|+.+. .+. .|++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v------------ 104 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAV------------ 104 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEE------------
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEE------------
Confidence 4567999999 344 7888998 777776653 46799999999863 232 5777
Q ss_pred hhhhhhhhcCCCccchhhhhhcccccce-eeeeeccC-ChHHHHHHHHHHHHHhccCC----------------------
Q 036440 90 IAFFIRLVVGRGRLHIFSWLNFMKRVIN-MQIIIHVF-GDEESVKILKICREAITSKA---------------------- 145 (181)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~iLHdw-~D~~~~~iL~~~~~a~~~~g---------------------- 145 (181)
+ ...++|.. +.++..++|++++..++|||
T Consensus 105 ---------------------------~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~ 157 (239)
T 3bxo_A 105 ---------------------------VSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADV 157 (239)
T ss_dssp ---------------------------EECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEE
T ss_pred ---------------------------EEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeE
Confidence 4 34356655 44777888999999988887
Q ss_pred ---------------------------------------------ccCCHHHHHHHHHhCCCeEEEEEEcCCCCeEEEEE
Q 036440 146 ---------------------------------------------KLSTEKELESLFVEVHFHHYKITPLFGLPSLIEVY 180 (181)
Q Consensus 146 ---------------------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~~ 180 (181)
+..|.+||+.+|++|||+++.+....+...++.++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~ 237 (239)
T 3bxo_A 158 VRRDGRTVARVSHSVREGNATRMEVHFTVADPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGV 237 (239)
T ss_dssp EEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEE
T ss_pred EecCCceEEEEEEEecCCCEEEEEEEEEEecCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEe
Confidence 01378999999999999888777666667777775
Q ss_pred C
Q 036440 181 P 181 (181)
Q Consensus 181 ~ 181 (181)
|
T Consensus 238 K 238 (239)
T 3bxo_A 238 P 238 (239)
T ss_dssp E
T ss_pred c
Confidence 4
No 44
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.54 E-value=1.8e-06 Score=67.35 Aligned_cols=105 Identities=18% Similarity=0.189 Sum_probs=81.6
Q ss_pred hcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc-----------CCCceEEecCCCCC-CCC--cceEec
Q 036440 25 FERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD-----------TNNLKYLADDFFQS-IPP--VCMIPL 79 (181)
Q Consensus 25 ~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~-----------~~ri~~~~gDff~~-~P~--~d~~~~ 79 (181)
+..-.+|||+| +--+.+.+.+|+ |..++.+.. .+++++..+|+.+. +|. .|++
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v-- 105 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFA-- 105 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEE--
T ss_pred CCCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEE--
Confidence 34567999999 112668999998 666665542 23689999999863 333 5888
Q ss_pred cccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCCh-HHHHHHHHHHHHHhccCC-------------
Q 036440 80 RLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGD-EESVKILKICREAITSKA------------- 145 (181)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D-~~~~~iL~~~~~a~~~~g------------- 145 (181)
++..++|.+.| +...++|++++..++|||
T Consensus 106 -------------------------------------~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 148 (235)
T 3sm3_A 106 -------------------------------------VMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHL 148 (235)
T ss_dssp -------------------------------------EEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTS
T ss_pred -------------------------------------EEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhH
Confidence 88889999865 557789999999999998
Q ss_pred ----------------------------------ccCCHHHHHHHHHhCCCeEEEEE
Q 036440 146 ----------------------------------KLSTEKELESLFVEVHFHHYKIT 168 (181)
Q Consensus 146 ----------------------------------~eRt~~E~~~Ll~~aGf~~~~i~ 168 (181)
+.+|.+|++++|+++||+++++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~ 205 (235)
T 3sm3_A 149 KLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDYFR 205 (235)
T ss_dssp HHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEE
T ss_pred HHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEEEEE
Confidence 14689999999999999999886
No 45
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.52 E-value=8.9e-07 Score=69.48 Aligned_cols=110 Identities=11% Similarity=0.041 Sum_probs=85.3
Q ss_pred HHHHHhhhhhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-------C----CCceEEecCCCCC-
Q 036440 16 LALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-------T----NNLKYLADDFFQS- 70 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-------~----~ri~~~~gDff~~- 70 (181)
.+++.. ......+|||+| .+|..+.+.+|+ |..++.+.. . ++++++.+|+...
T Consensus 20 ~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 20 TVVAVL--KSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD 97 (219)
T ss_dssp HHHHHH--HHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC
T ss_pred HHHHHH--hhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc
Confidence 344444 334567999999 578889999998 666665542 1 2899999998542
Q ss_pred CC--CcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC---
Q 036440 71 IP--PVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA--- 145 (181)
Q Consensus 71 ~P--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g--- 145 (181)
.+ ..|++ ++..++|.+++++..++|++++..++|||
T Consensus 98 ~~~~~fD~V---------------------------------------~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i 138 (219)
T 3jwg_A 98 KRFSGYDAA---------------------------------------TVIEVIEHLDENRLQAFEKVLFEFTRPQTVIV 138 (219)
T ss_dssp GGGTTCSEE---------------------------------------EEESCGGGCCHHHHHHHHHHHHTTTCCSEEEE
T ss_pred cccCCCCEE---------------------------------------EEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEE
Confidence 22 26888 88999999999999999999999999998
Q ss_pred -------------------------ccCCHHHHH----HHHHhCCCeEEE
Q 036440 146 -------------------------KLSTEKELE----SLFVEVHFHHYK 166 (181)
Q Consensus 146 -------------------------~eRt~~E~~----~Ll~~aGf~~~~ 166 (181)
...|.+|++ ++++++||++.-
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~ 188 (219)
T 3jwg_A 139 STPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRF 188 (219)
T ss_dssp EEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEE
T ss_pred EccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEEE
Confidence 124899999 889999997643
No 46
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.52 E-value=1e-06 Score=71.21 Aligned_cols=112 Identities=14% Similarity=0.078 Sum_probs=76.3
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhc-------cCCCceEEecCCCC-CCCC
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQ-SIPP 73 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~-~~P~ 73 (181)
..+++.. +...-.+||||| ++ +.+.+.+|+ |..++.+. ..++++++.+|+.+ ++|.
T Consensus 51 ~~l~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 127 (273)
T 3bus_A 51 DEMIALL--DVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFED 127 (273)
T ss_dssp HHHHHHS--CCCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCT
T ss_pred HHHHHhc--CCCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCC
Confidence 3444555 455667999999 34 678999998 56655443 25689999999986 3443
Q ss_pred --cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------
Q 036440 74 --VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------ 145 (181)
Q Consensus 74 --~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------ 145 (181)
.|++ +...++|.++|. .++|++++..++|||
T Consensus 128 ~~fD~v---------------------------------------~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 128 ASFDAV---------------------------------------WALESLHHMPDR--GRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp TCEEEE---------------------------------------EEESCTTTSSCH--HHHHHHHHTTEEEEEEEEEEE
T ss_pred CCccEE---------------------------------------EEechhhhCCCH--HHHHHHHHHHcCCCeEEEEEE
Confidence 5888 444444444333 344555555555444
Q ss_pred -------------------------ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 -------------------------KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 -------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
...|.+++.++++++||+++++...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 216 (273)
T 3bus_A 167 FVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTVDI 216 (273)
T ss_dssp EEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEEEC
T ss_pred eeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEEEEC
Confidence 5678899999999999999988764
No 47
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.51 E-value=1.1e-06 Score=68.91 Aligned_cols=102 Identities=16% Similarity=0.207 Sum_probs=78.4
Q ss_pred cCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc--CCCceEEecCCCCCCCC--cceEeccccchhhhH
Q 036440 26 ERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD--TNNLKYLADDFFQSIPP--VCMIPLRLGYSHIKI 88 (181)
Q Consensus 26 ~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~--~~ri~~~~gDff~~~P~--~d~~~~~~~~~~~~~ 88 (181)
..-.+||||| .+| +.+.+|+ |..++.+.. ..+++++.+|+.+..|. .|++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v----------- 107 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNI----------- 107 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEE-----------
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEE-----------
Confidence 3456899999 444 6778887 456665543 22899999999876443 5888
Q ss_pred HhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHH-HHhccCC----------------------
Q 036440 89 MIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICR-EAITSKA---------------------- 145 (181)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~-~a~~~~g---------------------- 145 (181)
++..+||.++|. .++|++++ ..++|||
T Consensus 108 ----------------------------~~~~~l~~~~~~--~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~ 157 (250)
T 2p7i_A 108 ----------------------------VLTHVLEHIDDP--VALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGI 157 (250)
T ss_dssp ----------------------------EEESCGGGCSSH--HHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTS
T ss_pred ----------------------------EEhhHHHhhcCH--HHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCc
Confidence 888889888765 47899999 8999888
Q ss_pred -----------------ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 -----------------KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 -----------------~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
+..|.++++++|+++||+++++...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 199 (250)
T 2p7i_A 158 ISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRSGI 199 (250)
T ss_dssp SSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred cccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEeee
Confidence 1258899999999999999988643
No 48
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.51 E-value=6.3e-07 Score=71.62 Aligned_cols=104 Identities=11% Similarity=0.055 Sum_probs=79.9
Q ss_pred hcCCCeEEEec------------CCCCceEEEeec-hhhhhhhc-------cCCCceEEecCCCC-CCCC--cceEeccc
Q 036440 25 FERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQ-SIPP--VCMIPLRL 81 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~-~~P~--~d~~~~~~ 81 (181)
...-.+|||+| .+|+ +.+.+|+ |..++.+. ..+|++++.+|+.+ ++|. .|++
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v---- 118 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLI---- 118 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEE----
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEE----
Confidence 34456999999 5675 8999998 66666543 25689999999964 2332 5888
Q ss_pred cchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC----------------
Q 036440 82 GYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA---------------- 145 (181)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g---------------- 145 (181)
+...++|.++ -.++|++++..++|||
T Consensus 119 -----------------------------------~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~ 160 (257)
T 3f4k_A 119 -----------------------------------WSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEASWFTSERPA 160 (257)
T ss_dssp -----------------------------------EEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCH
T ss_pred -----------------------------------EecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEeeccCCCChH
Confidence 7778888773 3568888888899888
Q ss_pred -----------ccCCHHHHHHHHHhCCCeEEEEEEcC
Q 036440 146 -----------KLSTEKELESLFVEVHFHHYKITPLF 171 (181)
Q Consensus 146 -----------~eRt~~E~~~Ll~~aGf~~~~i~~~~ 171 (181)
...|.+++.++|+++||+++.+...+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 197 (257)
T 3f4k_A 161 EIEDFWMDAYPEISVIPTCIDKMERAGYTPTAHFILP 197 (257)
T ss_dssp HHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEEEECC
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEEEECC
Confidence 24588999999999999999987654
No 49
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.50 E-value=2.1e-06 Score=67.43 Aligned_cols=111 Identities=8% Similarity=-0.049 Sum_probs=86.4
Q ss_pred HHHHHhhhhhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-----------CCCceEEecCCCCC-
Q 036440 16 LALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-----------TNNLKYLADDFFQS- 70 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-----------~~ri~~~~gDff~~- 70 (181)
.+++.. ....-.+|||+| .+|..+.+.+|+ |..++.+.. .++++++.+|+...
T Consensus 20 ~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (217)
T 3jwh_A 20 GVVAAL--KQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD 97 (217)
T ss_dssp HHHHHH--HHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC
T ss_pred HHHHHH--HhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc
Confidence 344444 344567999999 578889999998 666665542 12899999998532
Q ss_pred CC--CcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC---
Q 036440 71 IP--PVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA--- 145 (181)
Q Consensus 71 ~P--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g--- 145 (181)
.+ ..|++ ++..++|.+++++..++|++++..++|||
T Consensus 98 ~~~~~fD~v---------------------------------------~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li 138 (217)
T 3jwh_A 98 KRFHGYDAA---------------------------------------TVIEVIEHLDLSRLGAFERVLFEFAQPKIVIV 138 (217)
T ss_dssp GGGCSCSEE---------------------------------------EEESCGGGCCHHHHHHHHHHHHTTTCCSEEEE
T ss_pred ccCCCcCEE---------------------------------------eeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 22 36888 88999999999999999999999999999
Q ss_pred -------------------------ccCCHHHHH----HHHHhCCCeEEEE
Q 036440 146 -------------------------KLSTEKELE----SLFVEVHFHHYKI 167 (181)
Q Consensus 146 -------------------------~eRt~~E~~----~Ll~~aGf~~~~i 167 (181)
.+.|.+|++ ++++++||++.-.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 139 TTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQFQ 189 (217)
T ss_dssp EEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEEEEC
T ss_pred EccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceEEEE
Confidence 224899999 9999999986543
No 50
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.49 E-value=1.4e-06 Score=68.92 Aligned_cols=105 Identities=14% Similarity=0.128 Sum_probs=83.0
Q ss_pred hcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc---CCCceEEecCCCCC-CCC--cceEeccccchhhh
Q 036440 25 FERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD---TNNLKYLADDFFQS-IPP--VCMIPLRLGYSHIK 87 (181)
Q Consensus 25 ~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~---~~ri~~~~gDff~~-~P~--~d~~~~~~~~~~~~ 87 (181)
...-.+|||+| +--+.+.+.+|. |..++.+.. ..+++++.+|+.+. +|. .|++
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v---------- 120 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAI---------- 120 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEE----------
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEE----------
Confidence 44567999999 111568899998 566666653 57899999999863 443 5888
Q ss_pred HHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC----------------------
Q 036440 88 IMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA---------------------- 145 (181)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g---------------------- 145 (181)
+...++|.++|.. ++|+.++..++|||
T Consensus 121 -----------------------------~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~ 169 (242)
T 3l8d_A 121 -----------------------------MAINSLEWTEEPL--RALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLY 169 (242)
T ss_dssp -----------------------------EEESCTTSSSCHH--HHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGG
T ss_pred -----------------------------EEcChHhhccCHH--HHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhc
Confidence 8889999886654 78999999999999
Q ss_pred ------ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 ------KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 ------~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
...|.++++.+++++||+++++.++
T Consensus 170 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 200 (242)
T 3l8d_A 170 GKDVVCNTMMPWEFEQLVKEQGFKVVDGIGV 200 (242)
T ss_dssp TCCCSSCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred cccccccCCCHHHHHHHHHHcCCEEEEeecc
Confidence 3378899999999999999988754
No 51
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.49 E-value=3.7e-07 Score=68.80 Aligned_cols=116 Identities=17% Similarity=0.137 Sum_probs=90.0
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-CCCceEEecCCCCCCCC--cceEe
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-TNNLKYLADDFFQSIPP--VCMIP 78 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-~~ri~~~~gDff~~~P~--~d~~~ 78 (181)
..+++.+ +...-.+|||+| .+ . +.+.+|+ |..++.+.. .+++++..+| .++|. .|++
T Consensus 7 ~~~~~~~--~~~~~~~vLDiG~G~G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~~~~~~D~v- 79 (170)
T 3i9f_A 7 EEYLPNI--FEGKKGVIVDYGCGNGFYCKYLLEFA-T-KLYCIDINVIALKEVKEKFDSVITLSDP--KEIPDNSVDFI- 79 (170)
T ss_dssp TTTHHHH--HSSCCEEEEEETCTTCTTHHHHHTTE-E-EEEEECSCHHHHHHHHHHCTTSEEESSG--GGSCTTCEEEE-
T ss_pred HHHHHhc--CcCCCCeEEEECCCCCHHHHHHHhhc-C-eEEEEeCCHHHHHHHHHhCCCcEEEeCC--CCCCCCceEEE-
Confidence 3456666 567778999999 33 2 7899998 666666654 6799999999 44443 6888
Q ss_pred ccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------------
Q 036440 79 LRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------------- 145 (181)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------------- 145 (181)
++..++|.++|. .++|++++..++|+|
T Consensus 80 --------------------------------------~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 119 (170)
T 3i9f_A 80 --------------------------------------LFANSFHDMDDK--QHVISEVKRILKDDGRVIIIDWRKENTG 119 (170)
T ss_dssp --------------------------------------EEESCSTTCSCH--HHHHHHHHHHEEEEEEEEEEEECSSCCS
T ss_pred --------------------------------------EEccchhcccCH--HHHHHHHHHhcCCCCEEEEEEcCccccc
Confidence 889999998754 579999999999999
Q ss_pred ------ccCCHHHHHHHHHhCCCeEEEEEEcCCCCeEEEE
Q 036440 146 ------KLSTEKELESLFVEVHFHHYKITPLFGLPSLIEV 179 (181)
Q Consensus 146 ------~eRt~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~ 179 (181)
...|.++++++|+ ||+++++.........+.+
T Consensus 120 ~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~~~~~l~~ 157 (170)
T 3i9f_A 120 IGPPLSIRMDEKDYMGWFS--NFVVEKRFNPTPYHFGLVL 157 (170)
T ss_dssp SSSCGGGCCCHHHHHHHTT--TEEEEEEECSSTTEEEEEE
T ss_pred cCchHhhhcCHHHHHHHHh--CcEEEEccCCCCceEEEEE
Confidence 3468999999999 9999999888765544443
No 52
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.48 E-value=2.3e-06 Score=64.58 Aligned_cols=106 Identities=10% Similarity=0.070 Sum_probs=85.4
Q ss_pred hcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-CCCceEEecCCCC-CCCC--cceEeccccchhhhH
Q 036440 25 FERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-TNNLKYLADDFFQ-SIPP--VCMIPLRLGYSHIKI 88 (181)
Q Consensus 25 ~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-~~ri~~~~gDff~-~~P~--~d~~~~~~~~~~~~~ 88 (181)
...-.+|+|+| +. +.+.+.+|. |..++.+.. ..+++++.+|+.+ ++|. .|++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i----------- 111 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLI----------- 111 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEE-----------
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEE-----------
Confidence 44667999999 22 568899998 666666653 4679999999986 3443 5887
Q ss_pred HhhhhhhhhcCCCccchhhhhhcccccceee-eeeccCChHHHHHHHHHHHHHhccCC---------ccCCHHHHHHHHH
Q 036440 89 MIAFFIRLVVGRGRLHIFSWLNFMKRVINMQ-IIIHVFGDEESVKILKICREAITSKA---------KLSTEKELESLFV 158 (181)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~iLHdw~D~~~~~iL~~~~~a~~~~g---------~eRt~~E~~~Ll~ 158 (181)
++. .++|..+++...++|+.++..++|+| +..+.+++..+++
T Consensus 112 ----------------------------~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~ 163 (195)
T 3cgg_A 112 ----------------------------VSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAE 163 (195)
T ss_dssp ----------------------------EECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHH
T ss_pred ----------------------------EECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHH
Confidence 666 78888888889999999999999999 4578999999999
Q ss_pred hCCCeEEEEEEc
Q 036440 159 EVHFHHYKITPL 170 (181)
Q Consensus 159 ~aGf~~~~i~~~ 170 (181)
++||+++++...
T Consensus 164 ~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 164 RVGLELENAFES 175 (195)
T ss_dssp HHTEEEEEEESS
T ss_pred HcCCEEeeeecc
Confidence 999999988644
No 53
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.47 E-value=8.3e-07 Score=72.02 Aligned_cols=105 Identities=11% Similarity=0.047 Sum_probs=79.6
Q ss_pred hcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhc-------cCCCceEEecCCCC-CCCC--cceEecccc
Q 036440 25 FERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQ-SIPP--VCMIPLRLG 82 (181)
Q Consensus 25 ~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~-~~P~--~d~~~~~~~ 82 (181)
...-.+||||| +.|..+.+.+|+ |..++.+. ..++++++.+|+.+ ++|. .|++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i----- 118 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLI----- 118 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEE-----
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEE-----
Confidence 44567999999 558889999998 66666553 24789999999975 2333 5888
Q ss_pred chhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----------------
Q 036440 83 YSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA----------------- 145 (181)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g----------------- 145 (181)
+...++|.++ -.++|++++..++|||
T Consensus 119 ----------------------------------~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 161 (267)
T 3kkz_A 119 ----------------------------------WSEGAIYNIG---FERGLNEWRKYLKKGGYLAVSECSWFTDERPAE 161 (267)
T ss_dssp ----------------------------------EESSCGGGTC---HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHH
T ss_pred ----------------------------------EEcCCceecC---HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHH
Confidence 6666777662 3456777777777777
Q ss_pred ----------ccCCHHHHHHHHHhCCCeEEEEEEcC
Q 036440 146 ----------KLSTEKELESLFVEVHFHHYKITPLF 171 (181)
Q Consensus 146 ----------~eRt~~E~~~Ll~~aGf~~~~i~~~~ 171 (181)
...|.+++.++|+++||+++.+..++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 162 INDFWMDAYPEIDTIPNQVAKIHKAGYLPVATFILP 197 (267)
T ss_dssp HHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEEECC
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEEECC
Confidence 23478999999999999999988765
No 54
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.47 E-value=7.9e-07 Score=71.02 Aligned_cols=111 Identities=9% Similarity=0.085 Sum_probs=83.5
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCCC-C
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSIP-P 73 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~P-~ 73 (181)
..+++.. ....-.+||||| .+ +.+++.+|+ |..++.+. ..++++++.+|+.+..+ .
T Consensus 26 ~~l~~~~--~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 102 (256)
T 1nkv_A 26 ATLGRVL--RMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANE 102 (256)
T ss_dssp HHHHHHT--CCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSS
T ss_pred HHHHHhc--CCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCC
Confidence 3445555 456667999999 34 568899998 66666553 24689999999986433 2
Q ss_pred -cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------
Q 036440 74 -VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------- 145 (181)
Q Consensus 74 -~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------- 145 (181)
.|++ +...++|.++| ..++|++++..++|||
T Consensus 103 ~fD~V---------------------------------------~~~~~~~~~~~--~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 103 KCDVA---------------------------------------ACVGATWIAGG--FAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp CEEEE---------------------------------------EEESCGGGTSS--SHHHHHHHTTSEEEEEEEEEEEE
T ss_pred CCCEE---------------------------------------EECCChHhcCC--HHHHHHHHHHHcCCCeEEEEecC
Confidence 5888 77788888875 4668889999999888
Q ss_pred ---------------------ccCCHHHHHHHHHhCCCeEEEEEE
Q 036440 146 ---------------------KLSTEKELESLFVEVHFHHYKITP 169 (181)
Q Consensus 146 ---------------------~eRt~~E~~~Ll~~aGf~~~~i~~ 169 (181)
...|.+++.++|+++||+.+++..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 186 (256)
T 1nkv_A 142 YWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEMVL 186 (256)
T ss_dssp EETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCEEEE
T ss_pred cccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEEEEe
Confidence 234779999999999999987754
No 55
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.46 E-value=1.3e-06 Score=71.03 Aligned_cols=111 Identities=13% Similarity=0.155 Sum_probs=85.5
Q ss_pred HHHHHHhhhhhcCCCeEEEec----------CCCCceEEEeec-hhhhhhhccCCCceEEecCCCC-CCCC--cceEecc
Q 036440 15 SLALKYCKQIFERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLDTNNLKYLADDFFQ-SIPP--VCMIPLR 80 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~~~ri~~~~gDff~-~~P~--~d~~~~~ 80 (181)
..+++.. ....-.+||||| +-|+.+.+.+|+ |..++.+....+++++.+|+.+ ++|. .|++
T Consensus 24 ~~l~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v--- 98 (261)
T 3ege_A 24 NAIINLL--NLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGV--- 98 (261)
T ss_dssp HHHHHHH--CCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEE---
T ss_pred HHHHHHh--CCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEE---
Confidence 3444555 346678999999 448899999998 5566666655699999999975 3343 5888
Q ss_pred ccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC---------------
Q 036440 81 LGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA--------------- 145 (181)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g--------------- 145 (181)
+...++|.+.|- .++|++++..++ ||
T Consensus 99 ------------------------------------~~~~~l~~~~~~--~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~ 139 (261)
T 3ege_A 99 ------------------------------------ISILAIHHFSHL--EKSFQEMQRIIR-DGTIVLLTFDIRLAQRI 139 (261)
T ss_dssp ------------------------------------EEESCGGGCSSH--HHHHHHHHHHBC-SSCEEEEEECGGGCCCC
T ss_pred ------------------------------------EEcchHhhccCH--HHHHHHHHHHhC-CcEEEEEEcCCchhHHH
Confidence 888889988554 578999999999 88
Q ss_pred ---------------ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 ---------------KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 ---------------~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
...+.+++. +|++|||+++++.+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 140 WLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIPF 178 (261)
T ss_dssp GGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEEC
T ss_pred HHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEEe
Confidence 245677888 999999999888654
No 56
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.45 E-value=8.7e-07 Score=77.00 Aligned_cols=102 Identities=12% Similarity=0.201 Sum_probs=82.1
Q ss_pred CCCeEEEec------------CC-CCceEEEeec-hhhhhhhccC--------------CCceEEecCCCC-------CC
Q 036440 27 RLGSLVDVG------------AF-PCVKCTEFDQ-PHVVANLLDT--------------NNLKYLADDFFQ-------SI 71 (181)
Q Consensus 27 ~~~~lvDvG------------~~-P~l~~~~~Dl-P~Vv~~a~~~--------------~ri~~~~gDff~-------~~ 71 (181)
.-.+|||+| .+ |..+.+.+|+ |..++.+... ++++++.+|+.+ ++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 446899999 33 8889999999 6666655431 699999999986 45
Q ss_pred CC--cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC----
Q 036440 72 PP--VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA---- 145 (181)
Q Consensus 72 P~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g---- 145 (181)
|. .|++ +...++|.++|. .++|++++..++|||
T Consensus 163 ~~~~fD~V---------------------------------------~~~~~l~~~~d~--~~~l~~~~r~LkpgG~l~i 201 (383)
T 4fsd_A 163 PDSSVDIV---------------------------------------ISNCVCNLSTNK--LALFKEIHRVLRDGGELYF 201 (383)
T ss_dssp CTTCEEEE---------------------------------------EEESCGGGCSCH--HHHHHHHHHHEEEEEEEEE
T ss_pred CCCCEEEE---------------------------------------EEccchhcCCCH--HHHHHHHHHHcCCCCEEEE
Confidence 54 5888 888899988774 589999999999999
Q ss_pred -------------------------ccCCHHHHHHHHHhCCCeEEEEEE
Q 036440 146 -------------------------KLSTEKELESLFVEVHFHHYKITP 169 (181)
Q Consensus 146 -------------------------~eRt~~E~~~Ll~~aGf~~~~i~~ 169 (181)
...+.++|.++|+++||+.+++..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 202 SDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp EEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTTCCCEEEEE
T ss_pred EEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCCCceEEEEe
Confidence 226779999999999999887653
No 57
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.45 E-value=1.2e-06 Score=67.94 Aligned_cols=109 Identities=9% Similarity=0.041 Sum_probs=82.9
Q ss_pred HHHHHhhhhhcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhccCCCceEEecCCCCC-----CCC--cce
Q 036440 16 LALKYCKQIFERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLDTNNLKYLADDFFQS-----IPP--VCM 76 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~~~ri~~~~gDff~~-----~P~--~d~ 76 (181)
.+++.. ....-.+|||+| .. +.+.+.+|+ |..++.+....++++..+|+.+. .+. .|+
T Consensus 43 ~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~ 119 (227)
T 3e8s_A 43 AILLAI--LGRQPERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDL 119 (227)
T ss_dssp HHHHHH--HHTCCSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEE
T ss_pred HHHHHh--hcCCCCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccE
Confidence 344555 233458999999 33 668999998 66777777678889999887642 122 577
Q ss_pred EeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----------
Q 036440 77 IPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA----------- 145 (181)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g----------- 145 (181)
+ +...++| +. +..++|++++..++|||
T Consensus 120 v---------------------------------------~~~~~l~-~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 157 (227)
T 3e8s_A 120 I---------------------------------------CANFALL-HQ--DIIELLSAMRTLLVPGGALVIQTLHPWS 157 (227)
T ss_dssp E---------------------------------------EEESCCC-SS--CCHHHHHHHHHTEEEEEEEEEEECCTTT
T ss_pred E---------------------------------------EECchhh-hh--hHHHHHHHHHHHhCCCeEEEEEecCccc
Confidence 7 8888888 44 34579999999999998
Q ss_pred ---------------------------ccCCHHHHHHHHHhCCCeEEEEEE
Q 036440 146 ---------------------------KLSTEKELESLFVEVHFHHYKITP 169 (181)
Q Consensus 146 ---------------------------~eRt~~E~~~Ll~~aGf~~~~i~~ 169 (181)
..+|.++|.++|+++||+++++..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 158 VADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp TCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEEC
T ss_pred cCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEec
Confidence 124899999999999999999874
No 58
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.43 E-value=3.1e-06 Score=66.70 Aligned_cols=111 Identities=12% Similarity=0.149 Sum_probs=82.4
Q ss_pred HHHHhhhhhcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc---CCCceEEecCCCCC-CCC--cceEe
Q 036440 17 ALKYCKQIFERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD---TNNLKYLADDFFQS-IPP--VCMIP 78 (181)
Q Consensus 17 ~l~~~~~d~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~---~~ri~~~~gDff~~-~P~--~d~~~ 78 (181)
+.+.. ....-.+|||+| +.+..+.+.+|. |..++.+.. ..+++++.+|+.+. +|. .|++
T Consensus 35 l~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v- 111 (243)
T 3bkw_A 35 LRAML--PEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLA- 111 (243)
T ss_dssp HHHHS--CCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEE-
T ss_pred HHHhc--cccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEE-
Confidence 44444 334557999999 233238899998 566666643 35799999999863 433 5888
Q ss_pred ccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------------
Q 036440 79 LRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------------- 145 (181)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------------- 145 (181)
+...++|.++| ..++|++++..++|||
T Consensus 112 --------------------------------------~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 151 (243)
T 3bkw_A 112 --------------------------------------YSSLALHYVED--VARLFRTVHQALSPGGHFVFSTEHPIYMA 151 (243)
T ss_dssp --------------------------------------EEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECHHHHC
T ss_pred --------------------------------------EEeccccccch--HHHHHHHHHHhcCcCcEEEEEeCCccccc
Confidence 77888888865 4578999999999988
Q ss_pred --c------------------------------------cCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 --K------------------------------------LSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 --~------------------------------------eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
. .+|.++|.++|+++||+++++...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 152 PARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp CSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred CcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHHHHHHHHHHcCCEeeeeccC
Confidence 0 048999999999999999998754
No 59
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.41 E-value=1.1e-06 Score=68.49 Aligned_cols=123 Identities=10% Similarity=0.060 Sum_probs=91.7
Q ss_pred HHHHHHhhhhhcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCCCCC-cc
Q 036440 15 SLALKYCKQIFERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQSIPP-VC 75 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~~P~-~d 75 (181)
..+++........-.++||+| ++|..+.+.+|. |..++.+.. ..++++..+|+.+..+. .|
T Consensus 48 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD 127 (205)
T 3grz_A 48 QLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFD 127 (205)
T ss_dssp HHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEE
T ss_pred HHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCce
Confidence 344444432245567999999 667789999998 666665542 22399999999876554 68
Q ss_pred eEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------ccC
Q 036440 76 MIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-------KLS 148 (181)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-------~eR 148 (181)
++ +....+| ...++|+++...++|+| ...
T Consensus 128 ~i---------------------------------------~~~~~~~-----~~~~~l~~~~~~L~~gG~l~~~~~~~~ 163 (205)
T 3grz_A 128 LI---------------------------------------VANILAE-----ILLDLIPQLDSHLNEDGQVIFSGIDYL 163 (205)
T ss_dssp EE---------------------------------------EEESCHH-----HHHHHGGGSGGGEEEEEEEEEEEEEGG
T ss_pred EE---------------------------------------EECCcHH-----HHHHHHHHHHHhcCCCCEEEEEecCcc
Confidence 77 4444443 34678999999999999 455
Q ss_pred CHHHHHHHHHhCCCeEEEEEEcCCCCeEEEEEC
Q 036440 149 TEKELESLFVEVHFHHYKITPLFGLPSLIEVYP 181 (181)
Q Consensus 149 t~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~~~ 181 (181)
+.+++.++++++||+.+++....+..+++...|
T Consensus 164 ~~~~~~~~~~~~Gf~~~~~~~~~~w~~~~~~~~ 196 (205)
T 3grz_A 164 QLPKIEQALAENSFQIDLKMRAGRWIGLAISRK 196 (205)
T ss_dssp GHHHHHHHHHHTTEEEEEEEEETTEEEEEEEEC
T ss_pred cHHHHHHHHHHcCCceEEeeccCCEEEEEEecc
Confidence 789999999999999999998888888887654
No 60
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.40 E-value=2.5e-06 Score=70.73 Aligned_cols=107 Identities=12% Similarity=0.067 Sum_probs=80.5
Q ss_pred hhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCCCC-cceEecccc
Q 036440 24 IFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSIPP-VCMIPLRLG 82 (181)
Q Consensus 24 d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~P~-~d~~~~~~~ 82 (181)
+...-.+||||| ++| .+.+.+|+ |..++.+. ..++++++.+|+.+- +. .|++
T Consensus 69 ~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~fD~v----- 141 (302)
T 3hem_A 69 NLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-DEPVDRI----- 141 (302)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-CCCCSEE-----
T ss_pred CCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-CCCccEE-----
Confidence 345567999999 456 78999998 66666553 245899999999764 44 6888
Q ss_pred chhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCCh-------HHHHHHHHHHHHHhccCC----------
Q 036440 83 YSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGD-------EESVKILKICREAITSKA---------- 145 (181)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D-------~~~~~iL~~~~~a~~~~g---------- 145 (181)
+...++|.++| +...++|++++..++|||
T Consensus 142 ----------------------------------~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 142 ----------------------------------VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp ----------------------------------EEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred ----------------------------------EEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 66667777733 556677777777777777
Q ss_pred -------------------------------ccCCHHHHHHHHHhCCCeEEEEEEcC
Q 036440 146 -------------------------------KLSTEKELESLFVEVHFHHYKITPLF 171 (181)
Q Consensus 146 -------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~ 171 (181)
...|.+++.++++++||+++.+....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 244 (302)
T 3hem_A 188 DKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNAGWKVERYHRIG 244 (302)
T ss_dssp CHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEEEEECG
T ss_pred CccchhhccccccccccchHHHHHHhcCCCCCCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 24678899999999999999887653
No 61
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.37 E-value=5e-06 Score=65.24 Aligned_cols=105 Identities=9% Similarity=0.087 Sum_probs=80.9
Q ss_pred CCCeEEEec----------CCCCceEEEeec-hhhhhhhcc-----CCCceEEecCCCCC-CCC-cceEeccccchhhhH
Q 036440 27 RLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQS-IPP-VCMIPLRLGYSHIKI 88 (181)
Q Consensus 27 ~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~~-~P~-~d~~~~~~~~~~~~~ 88 (181)
.-.+|||+| +--+.+.+.+|. |..++.+.. ..+++++.+|+.+. .|. .|++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v----------- 105 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLI----------- 105 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEE-----------
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEE-----------
Confidence 447999999 112457899998 666665542 23899999999863 333 5888
Q ss_pred HhhhhhhhhcCCCccchhhhhhcccccceeee-eeccC-ChHHHHHHHHHHHHHhccCCc--------------------
Q 036440 89 MIAFFIRLVVGRGRLHIFSWLNFMKRVINMQI-IIHVF-GDEESVKILKICREAITSKAK-------------------- 146 (181)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-iLHdw-~D~~~~~iL~~~~~a~~~~g~-------------------- 146 (181)
++.. ++|.+ ++++..++|++++..++|||+
T Consensus 106 ----------------------------~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~ 157 (246)
T 1y8c_A 106 ----------------------------TCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDF 157 (246)
T ss_dssp ----------------------------EECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCE
T ss_pred ----------------------------EEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceE
Confidence 7777 88887 447788999999999999980
Q ss_pred --------------------------------------------cCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 147 --------------------------------------------LSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 147 --------------------------------------------eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
..|.+|++++|+++||+++++...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 225 (246)
T 1y8c_A 158 NYDDDEVFYYWENQFEDDLVSMYISFFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDC 225 (246)
T ss_dssp EEEETTEEEEEEEEEETTEEEEEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEES
T ss_pred EecCCcEEEEEecccCCceEEEEEEEEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcc
Confidence 129999999999999999999754
No 62
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.36 E-value=1.9e-06 Score=70.56 Aligned_cols=103 Identities=10% Similarity=0.077 Sum_probs=80.5
Q ss_pred CCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCCC--CC--cceEeccccch
Q 036440 28 LGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQSI--PP--VCMIPLRLGYS 84 (181)
Q Consensus 28 ~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~~--P~--~d~~~~~~~~~ 84 (181)
-.+|||+| +. +.+.+.+|+ |..++.+.. .++++++.+|+.+.. +. .|++
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v------- 140 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLI------- 140 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEE-------
T ss_pred CCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEE-------
Confidence 35899999 22 668999998 667766542 378999999998642 33 6888
Q ss_pred hhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------------------
Q 036440 85 HIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------------------- 145 (181)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------------------- 145 (181)
++..++|.++|. .++|+.++..++|||
T Consensus 141 --------------------------------~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~ 186 (285)
T 4htf_A 141 --------------------------------LFHAVLEWVADP--RSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVA 186 (285)
T ss_dssp --------------------------------EEESCGGGCSCH--HHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHT
T ss_pred --------------------------------EECchhhcccCH--HHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHh
Confidence 778888888765 468888999998888
Q ss_pred ---------------------ccCCHHHHHHHHHhCCCeEEEEEEcCC
Q 036440 146 ---------------------KLSTEKELESLFVEVHFHHYKITPLFG 172 (181)
Q Consensus 146 ---------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~~ 172 (181)
...|.+++.++|+++||+++++..+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~~~~ 234 (285)
T 4htf_A 187 GNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGKTGVRV 234 (285)
T ss_dssp TCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCEEEEEEEESS
T ss_pred cCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCceeeeeeEEE
Confidence 235789999999999999998877643
No 63
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.35 E-value=2.3e-06 Score=71.30 Aligned_cols=105 Identities=16% Similarity=0.164 Sum_probs=79.2
Q ss_pred hcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCCCCC-cceEeccccc
Q 036440 25 FERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQSIPP-VCMIPLRLGY 83 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~~P~-~d~~~~~~~~ 83 (181)
...-.+|||+| .+ +.+.+.+|+ |..++.+.. .++++++.+|+.+ +|. .|++
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~fD~v------ 159 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED-FAEPVDRI------ 159 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG-CCCCCSEE------
T ss_pred CCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH-CCCCcCEE------
Confidence 44557999999 33 558999998 666665532 4689999999854 454 6888
Q ss_pred hhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------------------
Q 036440 84 SHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------------------ 145 (181)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------------------ 145 (181)
+...++|.+++++..++|++++..++|||
T Consensus 160 ---------------------------------~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~ 206 (318)
T 2fk8_A 160 ---------------------------------VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAAR 206 (318)
T ss_dssp ---------------------------------EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTT
T ss_pred ---------------------------------EEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhc
Confidence 66777777777777777777777777777
Q ss_pred -----------------------ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 -----------------------KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 -----------------------~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
...|.+++.++++++||+++++...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~ 254 (318)
T 2fk8_A 207 GKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPEPLSL 254 (318)
T ss_dssp CHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTTCBCCCCEEC
T ss_pred cccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCCCEEEEEEec
Confidence 2247899999999999999887654
No 64
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.31 E-value=4.6e-06 Score=64.65 Aligned_cols=111 Identities=11% Similarity=0.171 Sum_probs=77.7
Q ss_pred HHHHHHhhhhhcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhccCCCceEEecCCCC---CCCC--cceE
Q 036440 15 SLALKYCKQIFERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLDTNNLKYLADDFFQ---SIPP--VCMI 77 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~~~ri~~~~gDff~---~~P~--~d~~ 77 (181)
..+++.. . ..-.+|+|+| +.+ .+.+.+|. |..++.+.. ...++..+|+.+ ++|. .|++
T Consensus 23 ~~l~~~~--~-~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 23 PNLLKHI--K-KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKE-KLDHVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp HHHHTTC--C-TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHT-TSSEEEESCTTTCCCCSCTTCEEEE
T ss_pred HHHHHHh--c-cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHH-hCCcEEEcchhhcCCCCCCCccCEE
Confidence 4455544 2 4567999999 444 78999998 556665543 224788899875 2332 5887
Q ss_pred eccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------------
Q 036440 78 PLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------------ 145 (181)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------------ 145 (181)
++..++|.++|. .++|++++..++|||
T Consensus 98 ---------------------------------------~~~~~l~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~~~ 136 (230)
T 3cc8_A 98 ---------------------------------------IFGDVLEHLFDP--WAVIEKVKPYIKQNGVILASIPNVSHI 136 (230)
T ss_dssp ---------------------------------------EEESCGGGSSCH--HHHHHHTGGGEEEEEEEEEEEECTTSH
T ss_pred ---------------------------------------EECChhhhcCCH--HHHHHHHHHHcCCCCEEEEEeCCcchH
Confidence 666777776655 367777777777766
Q ss_pred ------------------------ccCCHHHHHHHHHhCCCeEEEEEEcC
Q 036440 146 ------------------------KLSTEKELESLFVEVHFHHYKITPLF 171 (181)
Q Consensus 146 ------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~ 171 (181)
+..|.+++.++|+++||+++++....
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 186 (230)
T 3cc8_A 137 SVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVDRVY 186 (230)
T ss_dssp HHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEEecc
Confidence 22589999999999999999887643
No 65
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.30 E-value=6e-06 Score=64.54 Aligned_cols=113 Identities=9% Similarity=0.008 Sum_probs=82.4
Q ss_pred HHHHhhhhhcCCCeEEEecCCC-------CceEEEeechhhhhhhccCCCceEEecCCCC-CCCC--cceEeccccchhh
Q 036440 17 ALKYCKQIFERLGSLVDVGAFP-------CVKCTEFDQPHVVANLLDTNNLKYLADDFFQ-SIPP--VCMIPLRLGYSHI 86 (181)
Q Consensus 17 ~l~~~~~d~~~~~~lvDvG~~P-------~l~~~~~DlP~Vv~~a~~~~ri~~~~gDff~-~~P~--~d~~~~~~~~~~~ 86 (181)
+++... ....-.+|||+|.-+ ..+.+.+|.... ++++..+|+.+ ++|. .|++
T Consensus 58 ~~~~l~-~~~~~~~vLDiG~G~G~~~~~l~~~v~~~D~s~~--------~~~~~~~d~~~~~~~~~~fD~v--------- 119 (215)
T 2zfu_A 58 IARDLR-QRPASLVVADFGCGDCRLASSIRNPVHCFDLASL--------DPRVTVCDMAQVPLEDESVDVA--------- 119 (215)
T ss_dssp HHHHHH-TSCTTSCEEEETCTTCHHHHHCCSCEEEEESSCS--------STTEEESCTTSCSCCTTCEEEE---------
T ss_pred HHHHHh-ccCCCCeEEEECCcCCHHHHHhhccEEEEeCCCC--------CceEEEeccccCCCCCCCEeEE---------
Confidence 444442 234557899999222 246777777544 78889999886 3443 5888
Q ss_pred hHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC---------ccCCHHHHHHHH
Q 036440 87 KIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA---------KLSTEKELESLF 157 (181)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g---------~eRt~~E~~~Ll 157 (181)
+...++| + ++..++|+.++..++||| +..+.+++..+|
T Consensus 120 ------------------------------~~~~~l~-~--~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l 166 (215)
T 2zfu_A 120 ------------------------------VFCLSLM-G--TNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAV 166 (215)
T ss_dssp ------------------------------EEESCCC-S--SCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHH
T ss_pred ------------------------------EEehhcc-c--cCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHH
Confidence 7888888 4 445789999999999999 345899999999
Q ss_pred HhCCCeEEEEEEcCCCCeEEEEE
Q 036440 158 VEVHFHHYKITPLFGLPSLIEVY 180 (181)
Q Consensus 158 ~~aGf~~~~i~~~~~~~~viE~~ 180 (181)
+++||+++++....+...++.++
T Consensus 167 ~~~Gf~~~~~~~~~~~~~~~~~~ 189 (215)
T 2zfu_A 167 TKLGFKIVSKDLTNSHFFLFDFQ 189 (215)
T ss_dssp HHTTEEEEEEECCSTTCEEEEEE
T ss_pred HHCCCEEEEEecCCCeEEEEEEE
Confidence 99999998876665555666654
No 66
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.29 E-value=5.1e-06 Score=68.54 Aligned_cols=104 Identities=13% Similarity=0.160 Sum_probs=73.9
Q ss_pred hhcCCCeEEEec------------CCCC-ceEEEeec-hhhhhhhcc-----CCCceEEecCCCCC-CCC-cceEecccc
Q 036440 24 IFERLGSLVDVG------------AFPC-VKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQS-IPP-VCMIPLRLG 82 (181)
Q Consensus 24 d~~~~~~lvDvG------------~~P~-l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~~-~P~-~d~~~~~~~ 82 (181)
....-.+||||| .+|. .+.+.+|+ |..++.+.. ..+++++.+|+.+. .+. .|++
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v----- 93 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIA----- 93 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEE-----
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEE-----
Confidence 345668999999 7784 89999998 556654432 34899999999862 233 6888
Q ss_pred chhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----------------
Q 036440 83 YSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA----------------- 145 (181)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g----------------- 145 (181)
+...++|.++|.. ++|++++..++|||
T Consensus 94 ----------------------------------~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 137 (284)
T 3gu3_A 94 ----------------------------------ICHAFLLHMTTPE--TMLQKMIHSVKKGGKIICFEPHWISNMASYL 137 (284)
T ss_dssp ----------------------------------EEESCGGGCSSHH--HHHHHHHHTEEEEEEEEEEECCHHHHHHSEE
T ss_pred ----------------------------------EECChhhcCCCHH--HHHHHHHHHcCCCCEEEEEecchhcccccce
Confidence 5566666665543 56666666666666
Q ss_pred ----------------------------ccCCHHHHHHHHHhCCCeEEEEE
Q 036440 146 ----------------------------KLSTEKELESLFVEVHFHHYKIT 168 (181)
Q Consensus 146 ----------------------------~eRt~~E~~~Ll~~aGf~~~~i~ 168 (181)
...+.+++.++|++|||+++++.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~v~~~ 188 (284)
T 3gu3_A 138 LDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKIPIYLSELGVKNIECR 188 (284)
T ss_dssp ETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTHHHHHHHTTCEEEEEE
T ss_pred ecCcchhhccchHHHHHHHHHHhhhhcccccHHHHHHHHHHHcCCCeEEEE
Confidence 23345678999999999999774
No 67
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.26 E-value=5.4e-06 Score=67.75 Aligned_cols=113 Identities=12% Similarity=0.089 Sum_probs=76.3
Q ss_pred HHHHHHhhhhhcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc-CCCceEEecCCCCC-CCC-cceEecc
Q 036440 15 SLALKYCKQIFERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD-TNNLKYLADDFFQS-IPP-VCMIPLR 80 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~-~~ri~~~~gDff~~-~P~-~d~~~~~ 80 (181)
..+++.. ....-.+||||| +-|+.+.+.+|+ |..++.+.. .+++++..+|+.+- .+. .|++
T Consensus 47 ~~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v--- 121 (279)
T 3ccf_A 47 EDLLQLL--NPQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAV--- 121 (279)
T ss_dssp CHHHHHH--CCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEE---
T ss_pred HHHHHHh--CCCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEE---
Confidence 4556666 455667999999 237889999998 666666543 37899999999762 222 5887
Q ss_pred ccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC---------------
Q 036440 81 LGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA--------------- 145 (181)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g--------------- 145 (181)
+...++|.++|.. ++|++++..++|||
T Consensus 122 ------------------------------------~~~~~l~~~~d~~--~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 163 (279)
T 3ccf_A 122 ------------------------------------FSNAMLHWVKEPE--AAIASIHQALKSGGRFVAEFGGKGNIKYI 163 (279)
T ss_dssp ------------------------------------EEESCGGGCSCHH--HHHHHHHHHEEEEEEEEEEEECTTTTHHH
T ss_pred ------------------------------------EEcchhhhCcCHH--HHHHHHHHhcCCCcEEEEEecCCcchHHH
Confidence 4444444444322 34455555555544
Q ss_pred ----------------------ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 ----------------------KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 ----------------------~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
...|.+++.++|+++||+++++...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 164 LEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTYAALF 210 (279)
T ss_dssp HHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEEEEEe
Confidence 2458999999999999999887643
No 68
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.25 E-value=5.6e-06 Score=67.11 Aligned_cols=106 Identities=11% Similarity=0.040 Sum_probs=80.9
Q ss_pred cCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCC-CC-CC--cceEecccc
Q 036440 26 ERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQ-SI-PP--VCMIPLRLG 82 (181)
Q Consensus 26 ~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~-~~-P~--~d~~~~~~~ 82 (181)
..-.+|||+| +.+..+.+.+|+ |..++.+.. ..+++++.+|+.+ ++ +. .|++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v----- 137 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVI----- 137 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEE-----
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEE-----
Confidence 4557999999 345568999998 566665532 2579999999986 34 22 5888
Q ss_pred chhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeecc--CChHHHHHHHHHHHHHhccCCc--------------
Q 036440 83 YSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHV--FGDEESVKILKICREAITSKAK-------------- 146 (181)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHd--w~D~~~~~iL~~~~~a~~~~g~-------------- 146 (181)
+...++|. .+.++..++|++++..++|||+
T Consensus 138 ----------------------------------~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 183 (298)
T 1ri5_A 138 ----------------------------------SSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILER 183 (298)
T ss_dssp ----------------------------------EEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHH
T ss_pred ----------------------------------EECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHH
Confidence 77777877 6677788889999988888881
Q ss_pred -------------------------------------------cCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 147 -------------------------------------------LSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 147 -------------------------------------------eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
..|.++++.+|+++||+++++.+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 184 YKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp HHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred HccCccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 126799999999999999988764
No 69
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.24 E-value=2.2e-05 Score=61.75 Aligned_cols=105 Identities=12% Similarity=0.202 Sum_probs=78.4
Q ss_pred hcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-----CCCceEEecCCCCC-CCC-cceEeccccchh
Q 036440 25 FERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQS-IPP-VCMIPLRLGYSH 85 (181)
Q Consensus 25 ~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~~-~P~-~d~~~~~~~~~~ 85 (181)
+..-.+|||+| +. .+.+.+|. |..++.+.. ..+++++.+|+.+. .|. .|++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v-------- 100 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAI-------- 100 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEE--------
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEE--------
Confidence 33447999999 22 68999998 667666542 36899999998863 333 5777
Q ss_pred hhHHhhhhhhhhcCCCccchhhhhhcccccceeee-eeccC-ChHHHHHHHHHHHHHhccCC------------------
Q 036440 86 IKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQI-IIHVF-GDEESVKILKICREAITSKA------------------ 145 (181)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-iLHdw-~D~~~~~iL~~~~~a~~~~g------------------ 145 (181)
++.. ++|.+ +.++..++|++++..++|||
T Consensus 101 -------------------------------~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~ 149 (243)
T 3d2l_A 101 -------------------------------TILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNG 149 (243)
T ss_dssp -------------------------------EECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTSS
T ss_pred -------------------------------EEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcCC
Confidence 4443 66665 56677788888888888877
Q ss_pred -------------------------------------------------ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 -------------------------------------------------KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 -------------------------------------------------~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
+..|.+|++++|++|||+++++...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 223 (243)
T 3d2l_A 150 KTYATHAEQSSYIWFADPGEEPLSVVHELTFFIEGEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGD 223 (243)
T ss_dssp EEEEEECSSEEEEEEEEECSSTTEEEEEEEEEEECTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEET
T ss_pred cceeEECCCcEEEEEeecCccccEEEEEEEEEEEcCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecC
Confidence 0248999999999999999999754
No 70
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.18 E-value=5.6e-06 Score=65.99 Aligned_cols=66 Identities=17% Similarity=0.122 Sum_probs=45.9
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-CCCceEEecCCCCCCCC--cceEe
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-TNNLKYLADDFFQSIPP--VCMIP 78 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-~~ri~~~~gDff~~~P~--~d~~~ 78 (181)
..+++.. ....-.+|||+| .+|..+.+.+|+ |..++.+.. .++++++.+|+.+..|. .|++.
T Consensus 23 ~~l~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~ 100 (259)
T 2p35_A 23 RDLLAQV--PLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLY 100 (259)
T ss_dssp HHHHTTC--CCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEE
T ss_pred HHHHHhc--CCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEE
Confidence 3444444 345567999999 678999999998 566666643 57899999998763233 58874
Q ss_pred cccc
Q 036440 79 LRLG 82 (181)
Q Consensus 79 ~~~~ 82 (181)
.+..
T Consensus 101 ~~~~ 104 (259)
T 2p35_A 101 ANAV 104 (259)
T ss_dssp EESC
T ss_pred EeCc
Confidence 4333
No 71
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.17 E-value=1.4e-05 Score=64.51 Aligned_cols=140 Identities=9% Similarity=0.017 Sum_probs=75.3
Q ss_pred HHHHHhhhhhcCCCeEEEec------------CC-CCceEEEeechh-------hhhhhcc-------CCCceEEecC-C
Q 036440 16 LALKYCKQIFERLGSLVDVG------------AF-PCVKCTEFDQPH-------VVANLLD-------TNNLKYLADD-F 67 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG------------~~-P~l~~~~~DlP~-------Vv~~a~~-------~~ri~~~~gD-f 67 (181)
.+++.. +...-.+||||| ++ |..+.+.+|+-. .++.+.. .+++++..+| +
T Consensus 34 ~l~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 111 (275)
T 3bkx_A 34 AIAEAW--QVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNL 111 (275)
T ss_dssp HHHHHH--TCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCT
T ss_pred HHHHHc--CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChh
Confidence 444555 456668999999 44 778999999843 5554432 3689999998 6
Q ss_pred CC-CC--CC--cceEeccccchhhhH---Hhhhhhhhhc-CCCccchhhhhhcccccceeeeeeccCChHHHHH----HH
Q 036440 68 FQ-SI--PP--VCMIPLRLGYSHIKI---MIAFFIRLVV-GRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVK----IL 134 (181)
Q Consensus 68 f~-~~--P~--~d~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~----iL 134 (181)
.. .+ |. .|++.....+.|+.- .+.-+-++.+ |+ . +++............... +.
T Consensus 112 ~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG-~------------l~~~~~~~~~~~~~~~~~~~~~~~ 178 (275)
T 3bkx_A 112 SDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCD-H------------VDVAEWSMQPTALDQIGHLQAAMI 178 (275)
T ss_dssp TTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCS-E------------EEEEEECSSCSSGGGHHHHHHHHH
T ss_pred hhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCC-E------------EEEEEecCCCCchhhhhHHHHHHH
Confidence 53 23 32 588743333333211 1111112222 32 1 111111111111112122 22
Q ss_pred HHHHHHhccCC-----ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 135 KICREAITSKA-----KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 135 ~~~~~a~~~~g-----~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
+.......+.+ ...|.+++.++++++||+++++.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 179 QGLLYAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HHHHHHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred HHHHhhccccccccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 22222222221 4679999999999999999988765
No 72
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.17 E-value=1.9e-05 Score=61.51 Aligned_cols=105 Identities=10% Similarity=0.105 Sum_probs=79.3
Q ss_pred HHHHHhhhhhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCCCC---C
Q 036440 16 LALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQSIP---P 73 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~~P---~ 73 (181)
.+++.. +...-.+|+|+| .+|..+.+.+|. |..++.+.. .++++++.+|+.+.++ .
T Consensus 31 ~~l~~l--~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 108 (204)
T 3e05_A 31 VTLSKL--RLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPD 108 (204)
T ss_dssp HHHHHT--TCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCC
T ss_pred HHHHHc--CCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCC
Confidence 445555 456668999999 778899999998 677766542 2789999999987654 3
Q ss_pred cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------c
Q 036440 74 VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-------K 146 (181)
Q Consensus 74 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-------~ 146 (181)
.|++ ++...++ ...++|+.+...++||| .
T Consensus 109 ~D~i---------------------------------------~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 109 PDRV---------------------------------------FIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp CSEE---------------------------------------EESCCTT-----CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred CCEE---------------------------------------EECCCCc-----CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 6777 4444443 55689999999999999 3
Q ss_pred cCCHHHHHHHHHhCCCeEEEE
Q 036440 147 LSTEKELESLFVEVHFHHYKI 167 (181)
Q Consensus 147 eRt~~E~~~Ll~~aGf~~~~i 167 (181)
..+.+++..+++++|| .+++
T Consensus 145 ~~~~~~~~~~l~~~g~-~~~~ 164 (204)
T 3e05_A 145 LDTLTKAVEFLEDHGY-MVEV 164 (204)
T ss_dssp HHHHHHHHHHHHHTTC-EEEE
T ss_pred cccHHHHHHHHHHCCC-ceeE
Confidence 4567889999999999 4443
No 73
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.12 E-value=1.4e-05 Score=63.61 Aligned_cols=102 Identities=18% Similarity=0.178 Sum_probs=79.5
Q ss_pred hcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc---CCCceEEecCCCCC-CCC-------cceEecc
Q 036440 25 FERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD---TNNLKYLADDFFQS-IPP-------VCMIPLR 80 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~---~~ri~~~~gDff~~-~P~-------~d~~~~~ 80 (181)
...-.+|||+| .++ +.+.+|. |..++.+.. ..+++++.+|+.+. .+. .|++
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v--- 128 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANI--- 128 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEE---
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEE---
Confidence 34457899999 455 6788887 566665542 45899999999873 111 4566
Q ss_pred ccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCCc--------------
Q 036440 81 LGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKAK-------------- 146 (181)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g~-------------- 146 (181)
+...++|..++++..++|++++..++|||+
T Consensus 129 ------------------------------------~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 172 (245)
T 3ggd_A 129 ------------------------------------YMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFF 172 (245)
T ss_dssp ------------------------------------EEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHH
T ss_pred ------------------------------------EEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHH
Confidence 888999999999999999999999999991
Q ss_pred -------------------------cCCHHHHHHHHHhCCCeEEEEEE
Q 036440 147 -------------------------LSTEKELESLFVEVHFHHYKITP 169 (181)
Q Consensus 147 -------------------------eRt~~E~~~Ll~~aGf~~~~i~~ 169 (181)
..|.+|+.++| +||+++....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--aGf~~~~~~~ 218 (245)
T 3ggd_A 173 NSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF--PDFEILSQGE 218 (245)
T ss_dssp HHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC--TTEEEEEEEC
T ss_pred HHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh--CCCEEEeccc
Confidence 24889999999 9999987653
No 74
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.09 E-value=1.5e-05 Score=61.54 Aligned_cols=112 Identities=11% Similarity=0.110 Sum_probs=84.5
Q ss_pred HHHHHhhhhhcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-----CCCceEEecCCCC-CCCC--cc
Q 036440 16 LALKYCKQIFERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQ-SIPP--VC 75 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~-~~P~--~d 75 (181)
.+++... ....-.+|||+| +.++.+.+.+|. |..++.+.. ..+++++.+|+.+ ++|. .|
T Consensus 13 ~~~~~~~-~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 91 (209)
T 2p8j_A 13 RFLKYCN-ESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMS 91 (209)
T ss_dssp HHHHHHH-HSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEE
T ss_pred HHHHHHh-ccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCcee
Confidence 3444432 344557999999 346678999998 566655542 4689999999986 3443 58
Q ss_pred eEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC----------
Q 036440 76 MIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA---------- 145 (181)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g---------- 145 (181)
++ +...++|.++.++..++|++++..++|||
T Consensus 92 ~v---------------------------------------~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 92 FV---------------------------------------YSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp EE---------------------------------------EECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred EE---------------------------------------EEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 88 77788999988899999999999999999
Q ss_pred --------------------------ccCCHHHHHHHHHhCCCeEEEE
Q 036440 146 --------------------------KLSTEKELESLFVEVHFHHYKI 167 (181)
Q Consensus 146 --------------------------~eRt~~E~~~Ll~~aGf~~~~i 167 (181)
+..|.+|++++++++||.....
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~~ 180 (209)
T 2p8j_A 133 DERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKED 180 (209)
T ss_dssp STTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEEE
T ss_pred chhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeeee
Confidence 1237899999999999876543
No 75
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.08 E-value=2e-05 Score=64.88 Aligned_cols=129 Identities=17% Similarity=0.176 Sum_probs=88.8
Q ss_pred cCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCCCCC--cceEeccccch
Q 036440 26 ERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQSIPP--VCMIPLRLGYS 84 (181)
Q Consensus 26 ~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~~P~--~d~~~~~~~~~ 84 (181)
..-.+|+|+| .+|+.+.+.+|. |..++.+.. .++++++.+|+++.+|. .|++..+.-|.
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYI 187 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEECCCCB
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEECCCCC
Confidence 3456899999 689999999998 666665542 24899999999987643 68884433221
Q ss_pred hhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCCh----------HHHHHHHHHHHHHhccCC------ccC
Q 036440 85 HIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGD----------EESVKILKICREAITSKA------KLS 148 (181)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D----------~~~~~iL~~~~~a~~~~g------~eR 148 (181)
.... . -+...+++..++ +...++++.+...++||| ...
T Consensus 188 ~~~~-~-------------------------~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 241 (276)
T 2b3t_A 188 DEQD-P-------------------------HLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ 241 (276)
T ss_dssp CTTC-H-------------------------HHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS
T ss_pred Cccc-c-------------------------ccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch
Confidence 1100 0 012233332221 345789999999999999 567
Q ss_pred CHHHHHHHHHhCCCeEEEEEE-cCCCCeEEEEE
Q 036440 149 TEKELESLFVEVHFHHYKITP-LFGLPSLIEVY 180 (181)
Q Consensus 149 t~~E~~~Ll~~aGf~~~~i~~-~~~~~~viE~~ 180 (181)
+.++++++++++||+.+++.+ ..|...++-++
T Consensus 242 ~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~ 274 (276)
T 2b3t_A 242 QGEAVRQAFILAGYHDVETCRDYGDNERVTLGR 274 (276)
T ss_dssp CHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEE
T ss_pred HHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEE
Confidence 889999999999999887775 56666666554
No 76
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.06 E-value=0.00012 Score=56.27 Aligned_cols=119 Identities=10% Similarity=0.030 Sum_probs=83.2
Q ss_pred HHHHHHhhhhh--cCCCeEEEec----------CCCCceEEEeec-hhhhhhhccCCCceEEecCCCCCCCC--cceEec
Q 036440 15 SLALKYCKQIF--ERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLDTNNLKYLADDFFQSIPP--VCMIPL 79 (181)
Q Consensus 15 ~~~l~~~~~d~--~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~~~ri~~~~gDff~~~P~--~d~~~~ 79 (181)
..+++.. +. ..-.+++|+| +--. +.+.+|+ |..++. .++++++.+|+++.++. .|++
T Consensus 11 ~~l~~~l--~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~---~~~~~~~~~d~~~~~~~~~fD~i-- 82 (170)
T 3q87_B 11 YTLMDAL--EREGLEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES---HRGGNLVRADLLCSINQESVDVV-- 82 (170)
T ss_dssp HHHHHHH--HHHTCCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT---CSSSCEEECSTTTTBCGGGCSEE--
T ss_pred HHHHHHH--HhhcCCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc---ccCCeEEECChhhhcccCCCCEE--
Confidence 4445554 23 3456999999 2222 8899998 445554 67899999999987663 5887
Q ss_pred cccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChH-------HHHHHHHHHHHHhccCC-------
Q 036440 80 RLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDE-------ESVKILKICREAITSKA------- 145 (181)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~-------~~~~iL~~~~~a~~~~g------- 145 (181)
+..-..|..++. +..++++.+...+ |+|
T Consensus 83 -------------------------------------~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~ 124 (170)
T 3q87_B 83 -------------------------------------VFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVI 124 (170)
T ss_dssp -------------------------------------EECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEE
T ss_pred -------------------------------------EECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEe
Confidence 444444543332 4567888888888 888
Q ss_pred ccCCHHHHHHHHHhCCCeEEEEEEc-CCCCeEEEE
Q 036440 146 KLSTEKELESLFVEVHFHHYKITPL-FGLPSLIEV 179 (181)
Q Consensus 146 ~eRt~~E~~~Ll~~aGf~~~~i~~~-~~~~~viE~ 179 (181)
...+.+++.++++++||+.+.+... .+.+.++..
T Consensus 125 ~~~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~ 159 (170)
T 3q87_B 125 EANRPKEVLARLEERGYGTRILKVRKILGETVYII 159 (170)
T ss_dssp GGGCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEE
T ss_pred cCCCHHHHHHHHHHCCCcEEEEEeeccCCceEEEE
Confidence 5578899999999999999888743 555655543
No 77
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.02 E-value=5e-05 Score=59.82 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=74.1
Q ss_pred CCeEEEecCCCC------ceEEEeec-hhhhhhhccCCCceEEecCCCC-CCCC--cceEeccccchhhhHHhhhhhhhh
Q 036440 28 LGSLVDVGAFPC------VKCTEFDQ-PHVVANLLDTNNLKYLADDFFQ-SIPP--VCMIPLRLGYSHIKIMIAFFIRLV 97 (181)
Q Consensus 28 ~~~lvDvG~~P~------l~~~~~Dl-P~Vv~~a~~~~ri~~~~gDff~-~~P~--~d~~~~~~~~~~~~~~~~~~~~~~ 97 (181)
-.+|||+|.-.+ .+.+.+|. |..++.+... +++++.+|+.+ +.|. .|++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~v-------------------- 106 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIKIGVEPSERMAEIARKR-GVFVLKGTAENLPLKDESFDFA-------------------- 106 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCCEEEESCHHHHHHHHHT-TCEEEECBTTBCCSCTTCEEEE--------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHhccCCCHHHHHHHHhc-CCEEEEcccccCCCCCCCeeEE--------------------
Confidence 679999991111 01188888 5666666544 89999999865 2333 5888
Q ss_pred cCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------------------------------cc
Q 036440 98 VGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------------------------------KL 147 (181)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------------------------------~e 147 (181)
++..+||.++|. .++|++++..++||| +.
T Consensus 107 -------------------~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (219)
T 1vlm_A 107 -------------------LMVTTICFVDDP--ERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARF 165 (219)
T ss_dssp -------------------EEESCGGGSSCH--HHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCC
T ss_pred -------------------EEcchHhhccCH--HHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhccccc
Confidence 777788877654 468888888888887 22
Q ss_pred CCHHHHHHHHHhCCCeEEEEEEcC
Q 036440 148 STEKELESLFVEVHFHHYKITPLF 171 (181)
Q Consensus 148 Rt~~E~~~Ll~~aGf~~~~i~~~~ 171 (181)
.|.+++.++|+++||+++++....
T Consensus 166 ~~~~~l~~~l~~~Gf~~~~~~~~~ 189 (219)
T 1vlm_A 166 FSTEELMDLMRKAGFEEFKVVQTL 189 (219)
T ss_dssp CCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred CCHHHHHHHHHHCCCeEEEEeccc
Confidence 589999999999999999887543
No 78
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.01 E-value=3.2e-05 Score=58.86 Aligned_cols=112 Identities=15% Similarity=0.146 Sum_probs=87.1
Q ss_pred HHHHHHhhhhhcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCC-CCC-c
Q 036440 15 SLALKYCKQIFERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQS-IPP-V 74 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~-~P~-~ 74 (181)
+.+++.. +...-.+|+|+| +. +.+.+.+|. |..++.+.. .++++++.+|+.+. .+. .
T Consensus 22 ~~l~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 98 (199)
T 2xvm_A 22 SEVLEAV--KVVKPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQY 98 (199)
T ss_dssp HHHHHHT--TTSCSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCE
T ss_pred HHHHHHh--hccCCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCc
Confidence 4566666 455567999999 22 568999998 666665542 24799999999863 222 5
Q ss_pred ceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC---------
Q 036440 75 CMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA--------- 145 (181)
Q Consensus 75 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g--------- 145 (181)
|++ +...++|.+++++..++|++++..++|||
T Consensus 99 D~v---------------------------------------~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (199)
T 2xvm_A 99 DFI---------------------------------------LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMD 139 (199)
T ss_dssp EEE---------------------------------------EEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred eEE---------------------------------------EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeec
Confidence 888 88899999998899999999999999999
Q ss_pred -----------ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 -----------KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 -----------~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
...|.+|++++|++ |++++....
T Consensus 140 ~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 140 TADYPCTVGFPFAFKEGELRRYYEG--WERVKYNED 173 (199)
T ss_dssp CSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred cCCcCCCCCCCCccCHHHHHHHhcC--CeEEEeccc
Confidence 13489999999987 999887643
No 79
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.95 E-value=7.3e-05 Score=56.15 Aligned_cols=122 Identities=14% Similarity=0.222 Sum_probs=87.0
Q ss_pred HHHHHHhhhhhcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-------CC-CceEEecCCCCCCCC-
Q 036440 15 SLALKYCKQIFERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-------TN-NLKYLADDFFQSIPP- 73 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-------~~-ri~~~~gDff~~~P~- 73 (181)
..+++.. ....-.+|+|+| +. ..+.+.+|. |..++.+.. .+ |++++.+|+.+..+.
T Consensus 42 ~~l~~~~--~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (194)
T 1dus_A 42 KILVENV--VVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDR 118 (194)
T ss_dssp HHHHHHC--CCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTS
T ss_pred HHHHHHc--ccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccC
Confidence 5566666 455667999999 33 678999998 666665532 22 599999999986654
Q ss_pred -cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------
Q 036440 74 -VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------- 145 (181)
Q Consensus 74 -~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------- 145 (181)
.|++ ++...+| ++.+...++|+.+...++|+|
T Consensus 119 ~~D~v---------------------------------------~~~~~~~-~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 119 KYNKI---------------------------------------ITNPPIR-AGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp CEEEE---------------------------------------EECCCST-TCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CceEE---------------------------------------EECCCcc-cchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 5877 5555555 456777899999999999999
Q ss_pred ccCCHHHHHHHHHhCCCeEEEEEEcCCCCeEEEEE
Q 036440 146 KLSTEKELESLFVEVHFHHYKITPLFGLPSLIEVY 180 (181)
Q Consensus 146 ~eRt~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~~ 180 (181)
.....+++.+.+++. |..+++........++.+.
T Consensus 159 ~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~ 192 (194)
T 1dus_A 159 TKQGAKSLAKYMKDV-FGNVETVTIKGGYRVLKSK 192 (194)
T ss_dssp STHHHHHHHHHHHHH-HSCCEEEEEETTEEEEEEE
T ss_pred CCCChHHHHHHHHHH-hcceEEEecCCcEEEEEEe
Confidence 333456688889888 7777776655544555543
No 80
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=97.94 E-value=2.1e-05 Score=62.13 Aligned_cols=107 Identities=6% Similarity=0.003 Sum_probs=82.1
Q ss_pred hcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc------------------CCCceEEecCCCCCCC---
Q 036440 25 FERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD------------------TNNLKYLADDFFQSIP--- 72 (181)
Q Consensus 25 ~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~------------------~~ri~~~~gDff~~~P--- 72 (181)
...-.+|+|+| +-.+.+.+.+|+ |..++.+.. ..+++++.+|+++--+
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 34567999999 212558999998 456655531 3589999999987322
Q ss_pred -CcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCCc-----
Q 036440 73 -PVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKAK----- 146 (181)
Q Consensus 73 -~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g~----- 146 (181)
..|++ +...++|..++++..+.++.++..++|||+
T Consensus 100 ~~fD~v---------------------------------------~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 100 GHCAAF---------------------------------------YDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp HSEEEE---------------------------------------EEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred CCEEEE---------------------------------------EECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 25777 677788888888888999999999999993
Q ss_pred -------------cCCHHHHHHHHHhCCCeEEEEEEcC
Q 036440 147 -------------LSTEKELESLFVEVHFHHYKITPLF 171 (181)
Q Consensus 147 -------------eRt~~E~~~Ll~~aGf~~~~i~~~~ 171 (181)
..|.+|+++++++ ||++..+....
T Consensus 141 ~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~~~~~ 177 (203)
T 1pjz_A 141 LEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKVGGQD 177 (203)
T ss_dssp ESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEEEESS
T ss_pred EecCccccCCCCCCCCHHHHHHHhcC-CcEEEEecccc
Confidence 2479999999999 99988776543
No 81
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=97.91 E-value=4.3e-05 Score=60.82 Aligned_cols=55 Identities=4% Similarity=-0.106 Sum_probs=44.2
Q ss_pred eeeeeeccCC--hHHHHHHHHHHHHHhccCC----------------------ccCCHHHHHHHHHhCCCeEEEEEEcC
Q 036440 117 NMQIIIHVFG--DEESVKILKICREAITSKA----------------------KLSTEKELESLFVEVHFHHYKITPLF 171 (181)
Q Consensus 117 ~l~~iLHdw~--D~~~~~iL~~~~~a~~~~g----------------------~eRt~~E~~~Ll~~aGf~~~~i~~~~ 171 (181)
+...+||... .++-.++|++++..++||| ...+.+++.++|+++||+++++...+
T Consensus 162 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 162 LSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp EEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred EEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 7788888432 3366789999999999998 12478899999999999999887554
No 82
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.85 E-value=0.00016 Score=57.53 Aligned_cols=52 Identities=10% Similarity=0.164 Sum_probs=36.5
Q ss_pred CCCeEEEec----------CCCCceEEEeec-hhhhhhhcc-----CCCceEEecCCCCC-CCC-cceEe
Q 036440 27 RLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQS-IPP-VCMIP 78 (181)
Q Consensus 27 ~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~~-~P~-~d~~~ 78 (181)
...+|||+| +-.+.+.+.+|+ |..++.+.. ..+++++.+|+.+. .+. .|++.
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~ 110 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVT 110 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCccEEE
Confidence 447999999 222568999998 666665542 34799999999863 333 57773
No 83
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.84 E-value=6.6e-05 Score=64.70 Aligned_cols=98 Identities=22% Similarity=0.387 Sum_probs=74.3
Q ss_pred CCCeEEEec---------------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCC---C--CC----cc
Q 036440 27 RLGSLVDVG---------------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQS---I--PP----VC 75 (181)
Q Consensus 27 ~~~~lvDvG---------------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~---~--P~----~d 75 (181)
+.+.+||+| ..|+.+.+.+|. |.+++.++. ..+++++.+|+.+. + |. .|
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 668999999 359999999999 888887652 24799999999763 1 10 11
Q ss_pred -----eEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHH-HHHHHHHHHHHhccCC----
Q 036440 76 -----MIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEE-SVKILKICREAITSKA---- 145 (181)
Q Consensus 76 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~-~~~iL~~~~~a~~~~g---- 145 (181)
.+ ++..+||-.+|++ ...+|+.++.+++|||
T Consensus 158 ~~~p~av---------------------------------------~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvl 198 (277)
T 3giw_A 158 LTRPVAL---------------------------------------TVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAM 198 (277)
T ss_dssp TTSCCEE---------------------------------------EEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEE
T ss_pred cCCcchH---------------------------------------HhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEE
Confidence 23 6677788777766 4678888888888888
Q ss_pred --------------------------ccCCHHHHHHHHHhCCCeEE
Q 036440 146 --------------------------KLSTEKELESLFVEVHFHHY 165 (181)
Q Consensus 146 --------------------------~eRt~~E~~~Ll~~aGf~~~ 165 (181)
+.||.+|++++|. ||.++
T Consensus 199 s~~~~d~~p~~~~~~~~~~~~~g~p~~~rs~~ei~~~f~--Glelv 242 (277)
T 3giw_A 199 SIGTAEFAPQEVGRVAREYAARNMPMRLRTHAEAEEFFE--GLELV 242 (277)
T ss_dssp EEECCTTSHHHHHHHHHHHHHTTCCCCCCCHHHHHHTTT--TSEEC
T ss_pred EeccCCCCHHHHHHHHHHHHhcCCCCccCCHHHHHHHhC--CCccc
Confidence 5689999999994 99864
No 84
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.79 E-value=6.2e-05 Score=61.83 Aligned_cols=54 Identities=7% Similarity=0.103 Sum_probs=44.0
Q ss_pred eeeeeeccCChH--HHHHHHHHHHHHhccCC----------------------ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 117 NMQIIIHVFGDE--ESVKILKICREAITSKA----------------------KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 117 ~l~~iLHdw~D~--~~~~iL~~~~~a~~~~g----------------------~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
+...+||...++ +-.++|++++..++||| ...|.++|.++|+++||+++++...
T Consensus 179 ~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 256 (289)
T 2g72_A 179 VSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRTY 256 (289)
T ss_dssp EEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred EehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeEe
Confidence 777788774433 67789999999999999 1358999999999999999887643
No 85
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.78 E-value=5.5e-05 Score=61.88 Aligned_cols=54 Identities=7% Similarity=0.017 Sum_probs=44.1
Q ss_pred eeeeeeccC--ChHHHHHHHHHHHHHhccCC--------c--------------cCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 117 NMQIIIHVF--GDEESVKILKICREAITSKA--------K--------------LSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 117 ~l~~iLHdw--~D~~~~~iL~~~~~a~~~~g--------~--------------eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
+...+||.- +.++-.++|++++..|+||| . ..|.+|+.++|+++||+++++...
T Consensus 161 ~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 161 LTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp EEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred eehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEeec
Confidence 788888752 23566789999999999999 1 138999999999999999988754
No 86
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.77 E-value=0.00016 Score=57.40 Aligned_cols=127 Identities=9% Similarity=0.026 Sum_probs=68.7
Q ss_pred hcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-----CCCceEEecCCCCC-CCC--cceEeccccch
Q 036440 25 FERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQS-IPP--VCMIPLRLGYS 84 (181)
Q Consensus 25 ~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~~-~P~--~d~~~~~~~~~ 84 (181)
...-.+|+|+| +. +.+.+.+|. |..++.+.. .++++++.+|+.+. +|. .|++.....+.
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchh
Confidence 45567999999 22 568899998 556655532 47899999999652 333 58874443333
Q ss_pred hhhHHhhhh---hhh-hcCCCccchhhhhhcccccceeeeeeccCChHH---HHHHHHHHHHHhcc----CCccCCHHHH
Q 036440 85 HIKIMIAFF---IRL-VVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEE---SVKILKICREAITS----KAKLSTEKEL 153 (181)
Q Consensus 85 ~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~---~~~iL~~~~~a~~~----~g~eRt~~E~ 153 (181)
++.-..+++ .|. .+|+ .+++. ..+.++.. ..+.++.....+.. .....+.+++
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG--------------~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (263)
T 2yqz_A 116 LVPDWPKVLAEAIRVLKPGG--------------ALLEG--WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEV 179 (263)
T ss_dssp GCTTHHHHHHHHHHHEEEEE--------------EEEEE--EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHCCCCc--------------EEEEE--ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHH
Confidence 331111111 111 2222 11111 11111011 23344444333321 1145678899
Q ss_pred HHHHHhCCCeEEEEE
Q 036440 154 ESLFVEVHFHHYKIT 168 (181)
Q Consensus 154 ~~Ll~~aGf~~~~i~ 168 (181)
.++|+++||+++.+.
T Consensus 180 ~~~l~~~Gf~~~~~~ 194 (263)
T 2yqz_A 180 EEALRRLGLKPRTRE 194 (263)
T ss_dssp HHHHHHTTCCCEEEE
T ss_pred HHHHHHcCCCcceEE
Confidence 999999999977653
No 87
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.76 E-value=0.00011 Score=59.85 Aligned_cols=82 Identities=11% Similarity=0.021 Sum_probs=61.1
Q ss_pred hcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc----------CCCceEEecCCCCC----CCC--cceE
Q 036440 25 FERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD----------TNNLKYLADDFFQS----IPP--VCMI 77 (181)
Q Consensus 25 ~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~----------~~ri~~~~gDff~~----~P~--~d~~ 77 (181)
.....+|||+| +--+.+.+.+|+ |..++.+.. ..++.+..+|+.+. .|. .|++
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 55 QHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp HTTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 34557999999 112448899998 556655531 25788999998762 232 6888
Q ss_pred eccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceee-eeeccCCh-----HHHHHHHHHHHHHhccCC
Q 036440 78 PLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQ-IIIHVFGD-----EESVKILKICREAITSKA 145 (181)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~iLHdw~D-----~~~~~iL~~~~~a~~~~g 145 (181)
+.. .++|.+.| ++..++|++++..++|||
T Consensus 135 ---------------------------------------~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG 169 (293)
T 3thr_A 135 ---------------------------------------ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGG 169 (293)
T ss_dssp ---------------------------------------EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEE
T ss_pred ---------------------------------------EEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCe
Confidence 666 78888888 888999999999999999
No 88
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.75 E-value=0.00017 Score=56.48 Aligned_cols=112 Identities=17% Similarity=0.176 Sum_probs=73.8
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeech-hhhhh----hc------cCCCceEEecCCCCCC
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQP-HVVAN----LL------DTNNLKYLADDFFQSI 71 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~DlP-~Vv~~----a~------~~~ri~~~~gDff~~~ 71 (181)
...++.. +...-.+|||+| .+|+.+.+.+|+- ..++. +. ..++++++.+|+.+ +
T Consensus 17 ~~~~~~l--~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~-l 93 (218)
T 3mq2_A 17 DAEFEQL--RSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER-L 93 (218)
T ss_dssp HHHHHHH--HTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT-C
T ss_pred HHHHHHh--hccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh-C
Confidence 3455665 456668999999 7899999999994 43332 21 13489999999987 4
Q ss_pred CCc---ceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChH------HHHHHHHHHHHHhc
Q 036440 72 PPV---CMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDE------ESVKILKICREAIT 142 (181)
Q Consensus 72 P~~---d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~------~~~~iL~~~~~a~~ 142 (181)
|.. |.+ . ++..|... +..++|++++..++
T Consensus 94 ~~~~~~d~v---------------------------------------~---~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 131 (218)
T 3mq2_A 94 PPLSGVGEL---------------------------------------H---VLMPWGSLLRGVLGSSPEMLRGMAAVCR 131 (218)
T ss_dssp CSCCCEEEE---------------------------------------E---EESCCHHHHHHHHTSSSHHHHHHHHTEE
T ss_pred CCCCCCCEE---------------------------------------E---EEccchhhhhhhhccHHHHHHHHHHHcC
Confidence 432 555 1 11111111 01467888888888
Q ss_pred cCCc-------------------------cCCHHHHHHHHHhCCCeEEEEEEcC
Q 036440 143 SKAK-------------------------LSTEKELESLFVEVHFHHYKITPLF 171 (181)
Q Consensus 143 ~~g~-------------------------eRt~~E~~~Ll~~aGf~~~~i~~~~ 171 (181)
|||+ +...++++.+++++||++..+..+.
T Consensus 132 pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~~~~ 185 (218)
T 3mq2_A 132 PGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCRYLE 185 (218)
T ss_dssp EEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEEEEC
T ss_pred CCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceeeeccc
Confidence 8881 1123458889999999998876543
No 89
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.71 E-value=3.4e-05 Score=63.57 Aligned_cols=106 Identities=12% Similarity=0.099 Sum_probs=75.4
Q ss_pred HHHHHhhhhhcCCCeEEEec------------C-CCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCCCCC-
Q 036440 16 LALKYCKQIFERLGSLVDVG------------A-FPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQSIPP- 73 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG------------~-~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~~P~- 73 (181)
.+++.. ++..-.+|+|+| . +|..+.+.+|. |..++.+.. .+++++..+|+.+.+|.
T Consensus 101 ~~~~~~--~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~ 178 (275)
T 1yb2_A 101 YIIMRC--GLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQ 178 (275)
T ss_dssp -----C--CCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSC
T ss_pred HHHHHc--CCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCC
Confidence 344555 566668999999 3 68999999999 777665532 25899999999986664
Q ss_pred -cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC----ccC
Q 036440 74 -VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA----KLS 148 (181)
Q Consensus 74 -~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g----~eR 148 (181)
.|++ ++ +.++. .++|+++...++||| -..
T Consensus 179 ~fD~V---------------------------------------i~-----~~~~~--~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 179 MYDAV---------------------------------------IA-----DIPDP--WNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp CEEEE---------------------------------------EE-----CCSCG--GGSHHHHHHTEEEEEEEEEEES
T ss_pred CccEE---------------------------------------EE-----cCcCH--HHHHHHHHHHcCCCCEEEEEeC
Confidence 5777 33 23332 378999999999999 222
Q ss_pred ---CHHHHHHHHHhCCCeEEEEEE
Q 036440 149 ---TEKELESLFVEVHFHHYKITP 169 (181)
Q Consensus 149 ---t~~E~~~Ll~~aGf~~~~i~~ 169 (181)
..+++.+.++++||..+++..
T Consensus 213 ~~~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 213 NFDQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp SHHHHHHHHHHSGGGTEEEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCeEEEEEE
Confidence 446777888899999888765
No 90
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.70 E-value=0.00017 Score=53.94 Aligned_cols=105 Identities=11% Similarity=0.084 Sum_probs=76.9
Q ss_pred HHHHHhhhhhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCCCCC--
Q 036440 16 LALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQSIPP-- 73 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~~P~-- 73 (181)
.+++.. +...-.+|+|+| .+|..+.+.+|. |..++.+.. .+++ ++.+|..+.+|.
T Consensus 16 ~~~~~~--~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~ 92 (178)
T 3hm2_A 16 LAISAL--APKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVP 92 (178)
T ss_dssp HHHHHH--CCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCC
T ss_pred HHHHHh--cccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccC
Confidence 444555 455567999999 779999999999 556665542 3478 888988765543
Q ss_pred --cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------
Q 036440 74 --VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------ 145 (181)
Q Consensus 74 --~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------ 145 (181)
.|++ ++...+|. .++|+.+...++|+|
T Consensus 93 ~~~D~i---------------------------------------~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~ 127 (178)
T 3hm2_A 93 DNPDVI---------------------------------------FIGGGLTA------PGVFAAAWKRLPVGGRLVANA 127 (178)
T ss_dssp SCCSEE---------------------------------------EECC-TTC------TTHHHHHHHTCCTTCEEEEEE
T ss_pred CCCCEE---------------------------------------EECCcccH------HHHHHHHHHhcCCCCEEEEEe
Confidence 6777 66666665 679999999999999
Q ss_pred -ccCCHHHHHHHHHhCCCeEEEEE
Q 036440 146 -KLSTEKELESLFVEVHFHHYKIT 168 (181)
Q Consensus 146 -~eRt~~E~~~Ll~~aGf~~~~i~ 168 (181)
...+..++..++++.|+...++.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~ 151 (178)
T 3hm2_A 128 VTVESEQMLWALRKQFGGTISSFA 151 (178)
T ss_dssp CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred eccccHHHHHHHHHHcCCeeEEEE
Confidence 23456778889999998876653
No 91
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.69 E-value=9.3e-05 Score=59.28 Aligned_cols=109 Identities=11% Similarity=0.148 Sum_probs=81.1
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------C-CCCceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCCCC
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------A-FPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSIPP 73 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~-~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~P~ 73 (181)
..+++.. +...-.+|+|+| + .|..+.+.+|+ |..++.+. ..+|+++..+|+.+.+|.
T Consensus 83 ~~i~~~~--~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 160 (255)
T 3mb5_A 83 ALIVAYA--GISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEE 160 (255)
T ss_dssp HHHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCC
T ss_pred HHHHHhh--CCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCC
Confidence 3455555 566678999999 4 78999999999 66666554 256799999999987765
Q ss_pred --cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------
Q 036440 74 --VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------ 145 (181)
Q Consensus 74 --~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------ 145 (181)
.|++ ++ +.++. .++|+++...++|+|
T Consensus 161 ~~~D~v---------------------------------------~~-----~~~~~--~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 161 ENVDHV---------------------------------------IL-----DLPQP--ERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp CSEEEE---------------------------------------EE-----CSSCG--GGGHHHHHHHEEEEEEEEEEE
T ss_pred CCcCEE---------------------------------------EE-----CCCCH--HHHHHHHHHHcCCCCEEEEEE
Confidence 5766 32 33433 468999999999999
Q ss_pred -ccCCHHHHHHHHHhCC--CeEEEEEEcC
Q 036440 146 -KLSTEKELESLFVEVH--FHHYKITPLF 171 (181)
Q Consensus 146 -~eRt~~E~~~Ll~~aG--f~~~~i~~~~ 171 (181)
.....+++.++++++| |..+++....
T Consensus 195 ~~~~~~~~~~~~l~~~g~~f~~~~~~e~~ 223 (255)
T 3mb5_A 195 PCSNQVMRLHEKLREFKDYFMKPRTINVL 223 (255)
T ss_dssp SSHHHHHHHHHHHHHTGGGBSCCEEECCC
T ss_pred CCHHHHHHHHHHHHHcCCCccccEEEEEe
Confidence 2234567888999999 9988887553
No 92
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.68 E-value=1.4e-05 Score=61.33 Aligned_cols=120 Identities=17% Similarity=0.128 Sum_probs=72.5
Q ss_pred cCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-----CCCceEEecCCCCCCC-------CcceEecc
Q 036440 26 ERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQSIP-------PVCMIPLR 80 (181)
Q Consensus 26 ~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~~~P-------~~d~~~~~ 80 (181)
..-.+|+|+| .+|+.+.+.+|+ |..++.+.. ..+++++.+|+++.++ ..|++..+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 5667999999 788999999999 667766643 1178999999887544 25777333
Q ss_pred ccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHH------------------HHHHHHHHHHhc
Q 036440 81 LGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEES------------------VKILKICREAIT 142 (181)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~------------------~~iL~~~~~a~~ 142 (181)
.-| .....+|.++++.. .++++.++..++
T Consensus 109 pp~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 155 (215)
T 4dzr_A 109 PPY---------------------------------IPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLA 155 (215)
T ss_dssp CCC---------------------------------CC------------------------CTTHHHHHHHTCCGGGBC
T ss_pred CCC---------------------------------CCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhc
Confidence 322 11222222222222 788999999999
Q ss_pred cCCc-------cCCHHHHHHHHH--hCCCeEEEEEEcC-CCCeEEE
Q 036440 143 SKAK-------LSTEKELESLFV--EVHFHHYKITPLF-GLPSLIE 178 (181)
Q Consensus 143 ~~g~-------eRt~~E~~~Ll~--~aGf~~~~i~~~~-~~~~viE 178 (181)
|||+ ....+++..+++ ++||..+++.+.. +...++-
T Consensus 156 pgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~ 201 (215)
T 4dzr_A 156 RGRAGVFLEVGHNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIA 201 (215)
T ss_dssp SSSEEEEEECTTSCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEE
T ss_pred CCCeEEEEEECCccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEE
Confidence 9996 678999999999 9999998887654 4444443
No 93
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.66 E-value=0.00028 Score=61.14 Aligned_cols=101 Identities=9% Similarity=0.023 Sum_probs=76.9
Q ss_pred CCeEEEec-----------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCCCCC-----cceEeccccch
Q 036440 28 LGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQSIPP-----VCMIPLRLGYS 84 (181)
Q Consensus 28 ~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~~P~-----~d~~~~~~~~~ 84 (181)
-.+|+|+| ..|..+++.+|+ |..++.+.. -+|++++.+|+++.+|. .|++
T Consensus 173 ~~~VLDlGG~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~V------- 245 (373)
T 2qm3_A 173 NKDIFVLGDDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTF------- 245 (373)
T ss_dssp TCEEEEESCTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEE-------
T ss_pred CCEEEEECCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEE-------
Confidence 47899998 457789999999 888876642 12899999999986663 5887
Q ss_pred hhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCCc---------cCCH---HH
Q 036440 85 HIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKAK---------LSTE---KE 152 (181)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g~---------eRt~---~E 152 (181)
++....|.+ ...++|+++..+++|||+ ..+. .+
T Consensus 246 --------------------------------i~~~p~~~~---~~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~ 290 (373)
T 2qm3_A 246 --------------------------------ITDPPETLE---AIRAFVGRGIATLKGPRCAGYFGITRRESSLDKWRE 290 (373)
T ss_dssp --------------------------------EECCCSSHH---HHHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHH
T ss_pred --------------------------------EECCCCchH---HHHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHH
Confidence 555444433 248899999999999994 3777 67
Q ss_pred HHHHHH-hCCCeEEEEEEc
Q 036440 153 LESLFV-EVHFHHYKITPL 170 (181)
Q Consensus 153 ~~~Ll~-~aGf~~~~i~~~ 170 (181)
....+. +.||....+.+.
T Consensus 291 ~~~~l~~~~g~~~~~~~~~ 309 (373)
T 2qm3_A 291 IQKLLLNEFNVVITDIIRN 309 (373)
T ss_dssp HHHHHHHTSCCEEEEEEEE
T ss_pred HHHHHHHhcCcchhhhhhh
Confidence 778888 999988776653
No 94
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.66 E-value=0.00034 Score=53.76 Aligned_cols=96 Identities=10% Similarity=0.054 Sum_probs=73.4
Q ss_pred eEEEec-----------CCCCceEEEeec-hhhhhhhcc-----CCCceEEecCCCCC-CCC--cceEeccccchhhhHH
Q 036440 30 SLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQS-IPP--VCMIPLRLGYSHIKIM 89 (181)
Q Consensus 30 ~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~~-~P~--~d~~~~~~~~~~~~~~ 89 (181)
+|||+| +. +.+.+.+|. |..++.+.. ..++++..+|+.+. +|. .|++
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v------------ 98 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGI------------ 98 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEE------------
T ss_pred CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEE------------
Confidence 999999 33 458999998 566665542 34899999999863 443 5877
Q ss_pred hhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----------------------c
Q 036440 90 IAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-----------------------K 146 (181)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-----------------------~ 146 (181)
+. .. +.++.++..++|++++..++||| .
T Consensus 99 ---------------------------~~-~~-~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~ 149 (202)
T 2kw5_A 99 ---------------------------VS-IF-CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDL 149 (202)
T ss_dssp ---------------------------EE-EC-CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGG
T ss_pred ---------------------------EE-Eh-hcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCccee
Confidence 44 22 34577888999999999999999 3
Q ss_pred cCCHHHHHHHHHhCCCeEEEEEE
Q 036440 147 LSTEKELESLFVEVHFHHYKITP 169 (181)
Q Consensus 147 eRt~~E~~~Ll~~aGf~~~~i~~ 169 (181)
..|.+|++++|+ ||+++++..
T Consensus 150 ~~~~~~l~~~l~--Gf~v~~~~~ 170 (202)
T 2kw5_A 150 LPKLETLQSELP--SLNWLIANN 170 (202)
T ss_dssp CCCHHHHHHHCS--SSCEEEEEE
T ss_pred ecCHHHHHHHhc--CceEEEEEE
Confidence 579999999999 999988753
No 95
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.65 E-value=0.00016 Score=62.67 Aligned_cols=113 Identities=13% Similarity=0.115 Sum_probs=78.6
Q ss_pred HHHHHHhhhhhcCCCeEEEec----------CCCCceEEEeech-hhhhhhccCCCceEEecCCC----CCCC----Ccc
Q 036440 15 SLALKYCKQIFERLGSLVDVG----------AFPCVKCTEFDQP-HVVANLLDTNNLKYLADDFF----QSIP----PVC 75 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG----------~~P~l~~~~~DlP-~Vv~~a~~~~ri~~~~gDff----~~~P----~~d 75 (181)
..+++.+ ....-.+||||| +--+.+.+.+|.- ..++.+... .+......|- +.+| ..|
T Consensus 97 ~~l~~~~--~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~l~~~~~~fD 173 (416)
T 4e2x_A 97 RDFLATE--LTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK-GIRVRTDFFEKATADDVRRTEGPAN 173 (416)
T ss_dssp HHHHHTT--TCSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT-TCCEECSCCSHHHHHHHHHHHCCEE
T ss_pred HHHHHHh--CCCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc-CCCcceeeechhhHhhcccCCCCEE
Confidence 3444444 345567999999 1124588999984 556655533 3333332221 1122 257
Q ss_pred eEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC----------
Q 036440 76 MIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA---------- 145 (181)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g---------- 145 (181)
++ +..++||.++| -.++|++++..++|||
T Consensus 174 ~I---------------------------------------~~~~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~ 212 (416)
T 4e2x_A 174 VI---------------------------------------YAANTLCHIPY--VQSVLEGVDALLAPDGVFVFEDPYLG 212 (416)
T ss_dssp EE---------------------------------------EEESCGGGCTT--HHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred EE---------------------------------------EECChHHhcCC--HHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 77 88999999974 5679999999999998
Q ss_pred ----------------ccCCHHHHHHHHHhCCCeEEEEEEcC
Q 036440 146 ----------------KLSTEKELESLFVEVHFHHYKITPLF 171 (181)
Q Consensus 146 ----------------~eRt~~E~~~Ll~~aGf~~~~i~~~~ 171 (181)
...|.++++.+++++||+++.+...+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 213 DIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQRLP 254 (416)
T ss_dssp HHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred HhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEEcc
Confidence 35688999999999999999988754
No 96
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.65 E-value=0.00015 Score=57.87 Aligned_cols=110 Identities=10% Similarity=0.061 Sum_probs=75.5
Q ss_pred hcCCCeEEEec------------CCCCceEEEeec-hhhhhhh----ccCCCceEEecCCCCC---CCC---cceEeccc
Q 036440 25 FERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANL----LDTNNLKYLADDFFQS---IPP---VCMIPLRL 81 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a----~~~~ri~~~~gDff~~---~P~---~d~~~~~~ 81 (181)
+..-.+|+|+| .+|..+.+.+|. |..++.+ ...++++++.+|+.++ .|. .|++
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v---- 147 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVI---- 147 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEE----
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEE----
Confidence 44557899999 557778899998 4455433 2347899999998762 221 3444
Q ss_pred cchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHH-HHHHHHHHHHHhccCCc----------cC--
Q 036440 82 GYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEE-SVKILKICREAITSKAK----------LS-- 148 (181)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~-~~~iL~~~~~a~~~~g~----------eR-- 148 (181)
+|+..+.+ ...+|++++..++|||+ ..
T Consensus 148 ----------------------------------------~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 187 (230)
T 1fbn_A 148 ----------------------------------------YEDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTK 187 (230)
T ss_dssp ----------------------------------------EECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSS
T ss_pred ----------------------------------------EEecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCC
Confidence 36765543 45669999999999991 11
Q ss_pred -----CHHHHHHHHHhCCCeEEEEEEcCCC---CeEEEE
Q 036440 149 -----TEKELESLFVEVHFHHYKITPLFGL---PSLIEV 179 (181)
Q Consensus 149 -----t~~E~~~Ll~~aGf~~~~i~~~~~~---~~viE~ 179 (181)
..++++ +|+++||+.+++.++... ..++.+
T Consensus 188 ~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~v~~ 225 (230)
T 1fbn_A 188 DPKEIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHVMFVG 225 (230)
T ss_dssp CHHHHHHHHHH-HHHHHTEEEEEEEECTTTSTTEEEEEE
T ss_pred CHHHhhHHHHH-HHHHCCCEEEEEEccCCCccceEEEEE
Confidence 226788 999999999998877553 344444
No 97
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.59 E-value=0.00017 Score=57.34 Aligned_cols=106 Identities=12% Similarity=0.100 Sum_probs=77.1
Q ss_pred HHHHHhhhhhcCCCeEEEec------------C-CCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCC-CCC
Q 036440 16 LALKYCKQIFERLGSLVDVG------------A-FPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQS-IPP 73 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG------------~-~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~-~P~ 73 (181)
.+++.. ++..-.+|||+| . .|..+.+.+|. |..++.+.. .+++++..+|+.+. +|.
T Consensus 87 ~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~ 164 (258)
T 2pwy_A 87 AMVTLL--DLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEE 164 (258)
T ss_dssp HHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCT
T ss_pred HHHHHc--CCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC
Confidence 455555 566778999999 3 67889999998 676665542 37899999999875 654
Q ss_pred --cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC----cc
Q 036440 74 --VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA----KL 147 (181)
Q Consensus 74 --~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g----~e 147 (181)
.|++ ++ ++++. .++|+++...++|+| -.
T Consensus 165 ~~~D~v---------------------------------------~~-----~~~~~--~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 165 AAYDGV---------------------------------------AL-----DLMEP--WKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp TCEEEE---------------------------------------EE-----ESSCG--GGGHHHHHHHEEEEEEEEEEE
T ss_pred CCcCEE---------------------------------------EE-----CCcCH--HHHHHHHHHhCCCCCEEEEEe
Confidence 5777 33 34433 368999999999999 22
Q ss_pred C---CHHHHHHHHHhCCCeEEEEEE
Q 036440 148 S---TEKELESLFVEVHFHHYKITP 169 (181)
Q Consensus 148 R---t~~E~~~Ll~~aGf~~~~i~~ 169 (181)
. ..++..+.++++||..+++..
T Consensus 199 ~~~~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 199 PNITQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp SCHHHHHHHHHHHTTTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCceEEEEE
Confidence 2 345666778889999877664
No 98
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=97.57 E-value=0.00021 Score=58.28 Aligned_cols=111 Identities=14% Similarity=0.163 Sum_probs=85.1
Q ss_pred HHHHHHhhhhhcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc-----CCCceEEecCCCCCC-CC-cce
Q 036440 15 SLALKYCKQIFERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQSI-PP-VCM 76 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~~~-P~-~d~ 76 (181)
+.+++.. +...-.+|||+| +--+.+.+.+|. |..++.+.. ..++++..+|+.+.. +. .|+
T Consensus 110 ~~~~~~~--~~~~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~ 187 (286)
T 3m70_A 110 GDVVDAA--KIISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDF 187 (286)
T ss_dssp HHHHHHH--HHSCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEE
T ss_pred HHHHHHh--hccCCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccE
Confidence 4566666 344668999999 112568899998 556665532 238999999998743 33 688
Q ss_pred EeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----------
Q 036440 77 IPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA----------- 145 (181)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g----------- 145 (181)
+ +...++|.++++...++|++++..++|||
T Consensus 188 i---------------------------------------~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 228 (286)
T 3m70_A 188 I---------------------------------------VSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTD 228 (286)
T ss_dssp E---------------------------------------EECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCS
T ss_pred E---------------------------------------EEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 8 88899999999999999999999999999
Q ss_pred ---------ccCCHHHHHHHHHhCCCeEEEEE
Q 036440 146 ---------KLSTEKELESLFVEVHFHHYKIT 168 (181)
Q Consensus 146 ---------~eRt~~E~~~Ll~~aGf~~~~i~ 168 (181)
...+.+|++++++. |+++...
T Consensus 229 ~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~ 258 (286)
T 3m70_A 229 DVPCPLPFSFTFAENELKEYYKD--WEFLEYN 258 (286)
T ss_dssp SSCCSSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred CCCCCCCccccCCHHHHHHHhcC--CEEEEEE
Confidence 24568899999965 8887764
No 99
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.54 E-value=0.00012 Score=58.95 Aligned_cols=55 Identities=7% Similarity=-0.060 Sum_probs=39.3
Q ss_pred CCeEEEec------------CCCCceEEEeec-hhhhhhhc-------cCCCceEEecCC----CCCCC-----CcceEe
Q 036440 28 LGSLVDVG------------AFPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDF----FQSIP-----PVCMIP 78 (181)
Q Consensus 28 ~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDf----f~~~P-----~~d~~~ 78 (181)
-.++||+| ++|+.+.+.+|+ |..++.+. ..+|++++.+|. ++.+| ..|++.
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~ 145 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCM 145 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEE
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEE
Confidence 45899999 567889999998 66666553 256799999984 44555 258875
Q ss_pred cccc
Q 036440 79 LRLG 82 (181)
Q Consensus 79 ~~~~ 82 (181)
.+.-
T Consensus 146 ~npp 149 (254)
T 2h00_A 146 CNPP 149 (254)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 5533
No 100
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.54 E-value=0.00021 Score=58.52 Aligned_cols=106 Identities=13% Similarity=0.113 Sum_probs=77.2
Q ss_pred hcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-----CCCceEEecCCCCCCCC--cceEeccccch
Q 036440 25 FERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQSIPP--VCMIPLRLGYS 84 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~~~P~--~d~~~~~~~~~ 84 (181)
...-.+|+|+| ..+ +.+.+|. |..++.+.. .-.+++..+|+.+.+|. .|++
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~V------- 188 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLL------- 188 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEE-------
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEE-------
Confidence 34567999999 333 8899998 666665542 11289999998875543 5776
Q ss_pred hhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------ccCCHHHHHHHH
Q 036440 85 HIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-------KLSTEKELESLF 157 (181)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-------~eRt~~E~~~Ll 157 (181)
+.. ++ .+....+++.+...++||| ...+.+++.+++
T Consensus 189 --------------------------------v~n-~~----~~~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l 231 (254)
T 2nxc_A 189 --------------------------------VAN-LY----AELHAALAPRYREALVPGGRALLTGILKDRAPLVREAM 231 (254)
T ss_dssp --------------------------------EEE-CC----HHHHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHH
T ss_pred --------------------------------EEC-Cc----HHHHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHH
Confidence 332 22 2345789999999999999 456789999999
Q ss_pred HhCCCeEEEEEEcCCCCeE
Q 036440 158 VEVHFHHYKITPLFGLPSL 176 (181)
Q Consensus 158 ~~aGf~~~~i~~~~~~~~v 176 (181)
+++||+++++....+...+
T Consensus 232 ~~~Gf~~~~~~~~~~W~~l 250 (254)
T 2nxc_A 232 AGAGFRPLEEAAEGEWVLL 250 (254)
T ss_dssp HHTTCEEEEEEEETTEEEE
T ss_pred HHCCCEEEEEeccCCeEEE
Confidence 9999999998877665444
No 101
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=97.52 E-value=0.00065 Score=56.45 Aligned_cols=81 Identities=16% Similarity=0.135 Sum_probs=56.4
Q ss_pred cCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-------------CCCceEEecCCCCC-----C--C-
Q 036440 26 ERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-------------TNNLKYLADDFFQS-----I--P- 72 (181)
Q Consensus 26 ~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-------------~~ri~~~~gDff~~-----~--P- 72 (181)
....+|||+| +.|..+.+.+|+ |..++.+.. ..+++++.+|+.+. + |
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 3567999999 456778999998 455554432 24799999999863 3 2
Q ss_pred -CcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccC--ChHHHHHHHHHHHHHhccCC
Q 036440 73 -PVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVF--GDEESVKILKICREAITSKA 145 (181)
Q Consensus 73 -~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw--~D~~~~~iL~~~~~a~~~~g 145 (181)
..|++ +...++|.. +.++..++|++++..++|||
T Consensus 113 ~~fD~V---------------------------------------~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG 149 (313)
T 3bgv_A 113 MCFDIC---------------------------------------SCQFVCHYSFESYEQADMMLRNACERLSPGG 149 (313)
T ss_dssp CCEEEE---------------------------------------EEETCGGGGGGSHHHHHHHHHHHHTTEEEEE
T ss_pred CCEEEE---------------------------------------EEecchhhccCCHHHHHHHHHHHHHHhCCCc
Confidence 25777 666677764 33556678888888888877
No 102
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.46 E-value=0.0002 Score=53.62 Aligned_cols=102 Identities=16% Similarity=0.160 Sum_probs=73.8
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCCCC--
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQSIP-- 72 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~~P-- 72 (181)
..+++.. +...-.+++|+| .. .+.+.+|. |..++.+.. .+++++..+|+.+.+|
T Consensus 23 ~~~~~~~--~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 98 (192)
T 1l3i_A 23 CLIMCLA--EPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI 98 (192)
T ss_dssp HHHHHHH--CCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS
T ss_pred HHHHHhc--CCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC
Confidence 3344555 455668999999 23 68899998 666665542 2689999999876444
Q ss_pred -CcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------
Q 036440 73 -PVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------ 145 (181)
Q Consensus 73 -~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------ 145 (181)
..|++ ++...+|+ ..++|+.+...++|+|
T Consensus 99 ~~~D~v---------------------------------------~~~~~~~~-----~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 99 PDIDIA---------------------------------------VVGGSGGE-----LQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp CCEEEE---------------------------------------EESCCTTC-----HHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCEE---------------------------------------EECCchHH-----HHHHHHHHHHhcCCCcEEEEEe
Confidence 35777 55544443 3789999999999999
Q ss_pred -ccCCHHHHHHHHHhCCCeE
Q 036440 146 -KLSTEKELESLFVEVHFHH 164 (181)
Q Consensus 146 -~eRt~~E~~~Ll~~aGf~~ 164 (181)
...+.+++.+++++.||..
T Consensus 135 ~~~~~~~~~~~~l~~~g~~~ 154 (192)
T 1l3i_A 135 ILLETKFEAMECLRDLGFDV 154 (192)
T ss_dssp CBHHHHHHHHHHHHHTTCCC
T ss_pred cCcchHHHHHHHHHHCCCce
Confidence 3456778899999999943
No 103
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.45 E-value=0.00022 Score=60.34 Aligned_cols=105 Identities=10% Similarity=0.072 Sum_probs=72.8
Q ss_pred cCCCeEEEec-----------CC-CCceEEEeec-hhhhhhhc----------cCCCceEEecCCCCCC---CC--cceE
Q 036440 26 ERLGSLVDVG-----------AF-PCVKCTEFDQ-PHVVANLL----------DTNNLKYLADDFFQSI---PP--VCMI 77 (181)
Q Consensus 26 ~~~~~lvDvG-----------~~-P~l~~~~~Dl-P~Vv~~a~----------~~~ri~~~~gDff~~~---P~--~d~~ 77 (181)
....+|||+| ++ |..+.+.+|+ |.+++.+. ..+|++++.+|.++.. +. .|++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 3557899999 44 6779999999 66776553 2479999999987532 22 5887
Q ss_pred eccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHH--HHHHHHHHHHhccCC----------
Q 036440 78 PLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEES--VKILKICREAITSKA---------- 145 (181)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~--~~iL~~~~~a~~~~g---------- 145 (181)
++....|.+++... .+++++++..++|||
T Consensus 174 ---------------------------------------i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 214 (304)
T 3bwc_A 174 ---------------------------------------IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIW 214 (304)
T ss_dssp ---------------------------------------EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTT
T ss_pred ---------------------------------------EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcc
Confidence 44444444443332 588999999999999
Q ss_pred -ccCCHHHHHHHHHhCCCeEEEEEE
Q 036440 146 -KLSTEKELESLFVEVHFHHYKITP 169 (181)
Q Consensus 146 -~eRt~~E~~~Ll~~aGf~~~~i~~ 169 (181)
...+.+++.+.++++||..+++..
T Consensus 215 ~~~~~~~~~~~~l~~~GF~~v~~~~ 239 (304)
T 3bwc_A 215 LDLELIEKMSRFIRETGFASVQYAL 239 (304)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred cchHHHHHHHHHHHhCCCCcEEEEE
Confidence 123568899999999999888764
No 104
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.41 E-value=0.00075 Score=50.20 Aligned_cols=104 Identities=13% Similarity=0.103 Sum_probs=73.6
Q ss_pred HHHHHHhhhhhcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCCCCC--cc
Q 036440 15 SLALKYCKQIFERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQSIPP--VC 75 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~~P~--~d 75 (181)
..+++.. +...-.+++|+| +-|..+.+.+|. |..++.+.. .++++++.+|+.+.+|. .|
T Consensus 25 ~~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D 102 (183)
T 2yxd_A 25 AVSIGKL--NLNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLEFN 102 (183)
T ss_dssp HHHHHHH--CCCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCCCS
T ss_pred HHHHHHc--CCCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCCCc
Confidence 3444555 455667999999 338889999998 566665542 26899999999886553 67
Q ss_pred eEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------ccC
Q 036440 76 MIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-------KLS 148 (181)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-------~eR 148 (181)
++ ++..+ +...++|+.++.. |+| ...
T Consensus 103 ~i---------------------------------------~~~~~------~~~~~~l~~~~~~--~gG~l~~~~~~~~ 135 (183)
T 2yxd_A 103 KA---------------------------------------FIGGT------KNIEKIIEILDKK--KINHIVANTIVLE 135 (183)
T ss_dssp EE---------------------------------------EECSC------SCHHHHHHHHHHT--TCCEEEEEESCHH
T ss_pred EE---------------------------------------EECCc------ccHHHHHHHHhhC--CCCEEEEEecccc
Confidence 77 44444 3445688888777 888 344
Q ss_pred CHHHHHHHHHhCCCeEEEE
Q 036440 149 TEKELESLFVEVHFHHYKI 167 (181)
Q Consensus 149 t~~E~~~Ll~~aGf~~~~i 167 (181)
+.++..++++++||....+
T Consensus 136 ~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 136 NAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp HHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHcCCeEEEE
Confidence 5678889999999876554
No 105
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.40 E-value=0.00019 Score=58.83 Aligned_cols=107 Identities=12% Similarity=0.100 Sum_probs=77.9
Q ss_pred HHHHHhhhhhcCCCeEEEec------------C-CCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCCCCC-
Q 036440 16 LALKYCKQIFERLGSLVDVG------------A-FPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQSIPP- 73 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG------------~-~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~~P~- 73 (181)
.+++.. ++..-.+|||+| + .|..+.+.+|. |..++.+.. .+++++..+|+.+.+|.
T Consensus 103 ~i~~~~--~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 180 (277)
T 1o54_A 103 FIAMML--DVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEK 180 (277)
T ss_dssp HHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCC
T ss_pred HHHHHh--CCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCC
Confidence 445555 566667999999 3 68899999998 776665542 36899999999987664
Q ss_pred -cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC----c--
Q 036440 74 -VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA----K-- 146 (181)
Q Consensus 74 -~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g----~-- 146 (181)
.|++ ++ +.++. .++|+++...++|+| -
T Consensus 181 ~~D~V---------------------------------------~~-----~~~~~--~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 181 DVDAL---------------------------------------FL-----DVPDP--WNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp SEEEE---------------------------------------EE-----CCSCG--GGTHHHHHHHEEEEEEEEEEES
T ss_pred ccCEE---------------------------------------EE-----CCcCH--HHHHHHHHHHcCCCCEEEEEeC
Confidence 5777 33 23322 378999999999999 2
Q ss_pred -cCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 147 -LSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 147 -eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
....+++.+.|+++||..+++...
T Consensus 215 ~~~~~~~~~~~l~~~gf~~~~~~~~ 239 (277)
T 1o54_A 215 TTNQVQETLKKLQELPFIRIEVWES 239 (277)
T ss_dssp SHHHHHHHHHHHHHSSEEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCceeEEEEE
Confidence 224557778888999998887654
No 106
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.38 E-value=0.00033 Score=55.57 Aligned_cols=97 Identities=9% Similarity=0.077 Sum_probs=72.8
Q ss_pred cCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc-CCCceEEecCCCCCCCC-----cceEeccccchhhhH
Q 036440 26 ERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD-TNNLKYLADDFFQSIPP-----VCMIPLRLGYSHIKI 88 (181)
Q Consensus 26 ~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~-~~ri~~~~gDff~~~P~-----~d~~~~~~~~~~~~~ 88 (181)
..-.+|||+| +--+.+.+.+|+ |..++.+.. .++++++.+|+.+.+|. .|++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v----------- 115 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLI----------- 115 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEE-----------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEE-----------
Confidence 4557999999 212568999998 666766653 57899999999876652 4666
Q ss_pred HhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------ccCCHHHHHHHHHhCCC
Q 036440 89 MIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------KLSTEKELESLFVEVHF 162 (181)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------~eRt~~E~~~Ll~~aGf 162 (181)
+.. .+..++|++++..++||| ...+.+++.++++++||
T Consensus 116 ----------------------------~~~--------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf 159 (226)
T 3m33_A 116 ----------------------------VSR--------RGPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGW 159 (226)
T ss_dssp ----------------------------EEE--------SCCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTC
T ss_pred ----------------------------EeC--------CCHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCC
Confidence 222 234467889999999998 34588899999999999
Q ss_pred eEEEEEE
Q 036440 163 HHYKITP 169 (181)
Q Consensus 163 ~~~~i~~ 169 (181)
..+++..
T Consensus 160 ~~~~~~~ 166 (226)
T 3m33_A 160 DIVAEDH 166 (226)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9988764
No 107
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.38 E-value=0.0021 Score=52.14 Aligned_cols=131 Identities=8% Similarity=0.055 Sum_probs=80.2
Q ss_pred HHHHhhhhhc-CCCeEEEec------------CCCCceEEEeec-hhhhhhhc-------cCCCceEEecCCCCC---CC
Q 036440 17 ALKYCKQIFE-RLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQS---IP 72 (181)
Q Consensus 17 ~l~~~~~d~~-~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~---~P 72 (181)
++..+. +.. .-.+|||+| +.|. +.+.+|+ |..++.+. ..+|++++.+|+.+. +|
T Consensus 39 ll~~~~-~~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~ 116 (259)
T 3lpm_A 39 LLAKFS-YLPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIP 116 (259)
T ss_dssp HHHHHC-CCCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSC
T ss_pred HHHHHh-cCCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhc
Confidence 444442 455 667999999 4454 8899998 56665553 256899999999864 32
Q ss_pred C--cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----
Q 036440 73 P--VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA----- 145 (181)
Q Consensus 73 ~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g----- 145 (181)
. .|++..+--|..... .|.-+.+ -.+.+-+.........+++.+...++|+|
T Consensus 117 ~~~fD~Ii~npPy~~~~~---------~~~~~~~------------~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 117 KERADIVTCNPPYFATPD---------TSLKNTN------------EHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp TTCEEEEEECCCC--------------------------------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCccEEEECCCCCCCcc---------ccCCCCc------------hHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 2 588844433211100 0000000 00011111123445579999999999999
Q ss_pred -ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 -KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 -~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
...+.+++..++++.||...++.++
T Consensus 176 ~~~~~~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 176 HRPERLLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp ECTTTHHHHHHHHHHTTEEEEEEEEE
T ss_pred EcHHHHHHHHHHHHHCCCceEEEEEe
Confidence 6778899999999999998887665
No 108
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.37 E-value=0.00058 Score=56.27 Aligned_cols=44 Identities=18% Similarity=0.127 Sum_probs=35.4
Q ss_pred cCCCeEEEec------------C-CCCceEEEeec-hhhhhhhcc--------CCCceEEecCCCC
Q 036440 26 ERLGSLVDVG------------A-FPCVKCTEFDQ-PHVVANLLD--------TNNLKYLADDFFQ 69 (181)
Q Consensus 26 ~~~~~lvDvG------------~-~P~l~~~~~Dl-P~Vv~~a~~--------~~ri~~~~gDff~ 69 (181)
..-.+||||| . -|..+.+.+|+ |..++.+.. .++++++.+|+.+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 100 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDD 100 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHh
Confidence 4568999999 3 48999999998 666766542 5799999999986
No 109
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.36 E-value=0.0011 Score=52.64 Aligned_cols=104 Identities=10% Similarity=0.042 Sum_probs=71.0
Q ss_pred hcCCCeEEEec------------CC-CCceEEEeechh-----hhhhhccCCCceEEecCCCCC--CC----CcceEecc
Q 036440 25 FERLGSLVDVG------------AF-PCVKCTEFDQPH-----VVANLLDTNNLKYLADDFFQS--IP----PVCMIPLR 80 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~-P~l~~~~~DlP~-----Vv~~a~~~~ri~~~~gDff~~--~P----~~d~~~~~ 80 (181)
++.-.+|+|+| .+ |..+.+.+|+-. ..+.+...++++++.+|+.+. +| ..|++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V--- 151 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVI--- 151 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEE---
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEE---
Confidence 44557999999 33 778999999843 344444458999999999873 22 24766
Q ss_pred ccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------cc------C
Q 036440 81 LGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------KL------S 148 (181)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------~e------R 148 (181)
++. .. ..+....++++++..++|+| .. .
T Consensus 152 ------------------------------------~~~-~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~ 191 (233)
T 2ipx_A 152 ------------------------------------FAD-VA---QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTA 191 (233)
T ss_dssp ------------------------------------EEC-CC---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSS
T ss_pred ------------------------------------EEc-CC---CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCC
Confidence 331 11 34455677889999999998 11 1
Q ss_pred -----CHHHHHHHHHhCCCeEEEEEEcCC
Q 036440 149 -----TEKELESLFVEVHFHHYKITPLFG 172 (181)
Q Consensus 149 -----t~~E~~~Ll~~aGf~~~~i~~~~~ 172 (181)
-.++ .++|+++||+++++.++..
T Consensus 192 ~~~~~~~~~-~~~l~~~Gf~~~~~~~~~~ 219 (233)
T 2ipx_A 192 SAEAVFASE-VKKMQQENMKPQEQLTLEP 219 (233)
T ss_dssp CHHHHHHHH-HHTTGGGTEEEEEEEECTT
T ss_pred CHHHHHHHH-HHHHHHCCCceEEEEecCC
Confidence 1123 6889999999998776544
No 110
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.31 E-value=0.0021 Score=50.76 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=74.6
Q ss_pred HHHHHhhhhhcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCCC---CC
Q 036440 16 LALKYCKQIFERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQSI---PP 73 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~~---P~ 73 (181)
.+++.. +...-.+|+|+| +. ..+.+.+|. |..++.+.. .++++++.+|+.+.+ +.
T Consensus 46 ~~l~~l--~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~ 122 (204)
T 3njr_A 46 LTLAAL--APRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPL 122 (204)
T ss_dssp HHHHHH--CCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCC
T ss_pred HHHHhc--CCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCC
Confidence 344555 456668999999 33 678999998 666665542 348999999998743 34
Q ss_pred cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------c
Q 036440 74 VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-------K 146 (181)
Q Consensus 74 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-------~ 146 (181)
.|++ ++...+ + .. +++.+...++||| .
T Consensus 123 ~D~v---------------------------------------~~~~~~----~--~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 123 PEAV---------------------------------------FIGGGG----S--QA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp CSEE---------------------------------------EECSCC----C--HH-HHHHHHHHSCTTCEEEEEECS
T ss_pred CCEE---------------------------------------EECCcc----c--HH-HHHHHHHhcCCCcEEEEEecC
Confidence 6777 333222 1 22 8999999999999 3
Q ss_pred cCCHHHHHHHHHhCCCeEEEEE
Q 036440 147 LSTEKELESLFVEVHFHHYKIT 168 (181)
Q Consensus 147 eRt~~E~~~Ll~~aGf~~~~i~ 168 (181)
..+.++..+++++.|+++.++.
T Consensus 157 ~~~~~~~~~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 157 LESETLLTQLHARHGGQLLRID 178 (204)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEE
T ss_pred cccHHHHHHHHHhCCCcEEEEE
Confidence 4567788889999999887764
No 111
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=97.27 E-value=0.00066 Score=56.13 Aligned_cols=103 Identities=8% Similarity=-0.037 Sum_probs=78.9
Q ss_pred CCCeEEEec----------CCCCceEEEeec-hhhhhhhc-----------------------cCCCceEEecCCCCCCC
Q 036440 27 RLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLL-----------------------DTNNLKYLADDFFQSIP 72 (181)
Q Consensus 27 ~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~-----------------------~~~ri~~~~gDff~~~P 72 (181)
.-.+|||+| +--+.+.+.+|+ |..++.+. ...+|+++.+|+++--+
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~ 147 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR 147 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc
Confidence 457899999 222568999998 45555542 12689999999997322
Q ss_pred ----CcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCCc--
Q 036440 73 ----PVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKAK-- 146 (181)
Q Consensus 73 ----~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g~-- 146 (181)
.-|++ +.+.++|..++++..+.++.++..++|||+
T Consensus 148 ~~~~~FD~V---------------------------------------~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~ 188 (252)
T 2gb4_A 148 ANIGKFDRI---------------------------------------WDRGALVAINPGDHDRYADIILSLLRKEFQYL 188 (252)
T ss_dssp GCCCCEEEE---------------------------------------EESSSTTTSCGGGHHHHHHHHHHTEEEEEEEE
T ss_pred ccCCCEEEE---------------------------------------EEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 25777 667788888888888999999999999992
Q ss_pred ----------------cCCHHHHHHHHHhCCCeEEEEEE
Q 036440 147 ----------------LSTEKELESLFVEVHFHHYKITP 169 (181)
Q Consensus 147 ----------------eRt~~E~~~Ll~~aGf~~~~i~~ 169 (181)
..|.+|+++++++ +|+++.+..
T Consensus 189 l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~~~~ 226 (252)
T 2gb4_A 189 VAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQCLEE 226 (252)
T ss_dssp EEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEEEEE
T ss_pred EEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEEEec
Confidence 2588999999988 599877653
No 112
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=97.21 E-value=0.0046 Score=51.29 Aligned_cols=111 Identities=14% Similarity=0.105 Sum_probs=81.5
Q ss_pred CCCeEEEec------------CCCCceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCCCC---cceEeccccc
Q 036440 27 RLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSIPP---VCMIPLRLGY 83 (181)
Q Consensus 27 ~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~P~---~d~~~~~~~~ 83 (181)
.-.+|+||| ..|..+++..|. |..++.+. ..++|++..+|.++.+|. .|++
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~I------ 88 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVI------ 88 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEE------
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEE------
Confidence 346899999 778889999998 45555443 367999999999998874 5766
Q ss_pred hhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----ccCCHHHHHHHHH
Q 036440 84 SHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-----KLSTEKELESLFV 158 (181)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-----~eRt~~E~~~Ll~ 158 (181)
++..+ +.+--.+||..+...+++++ .-...+..+++|.
T Consensus 89 ---------------------------------viaG~----Gg~~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L~ 131 (225)
T 3kr9_A 89 ---------------------------------TIAGM----GGRLIARILEEGLGKLANVERLILQPNNREDDLRIWLQ 131 (225)
T ss_dssp ---------------------------------EEEEE----CHHHHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHHH
T ss_pred ---------------------------------EEcCC----ChHHHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHHH
Confidence 44433 34456789999999999887 3467899999999
Q ss_pred hCCCeEEEEEEc--CC-CCeEEEEE
Q 036440 159 EVHFHHYKITPL--FG-LPSLIEVY 180 (181)
Q Consensus 159 ~aGf~~~~i~~~--~~-~~~viE~~ 180 (181)
+.||.++.-.-+ .+ ...+|.+.
T Consensus 132 ~~Gf~i~~e~lv~e~~~~Yeii~~~ 156 (225)
T 3kr9_A 132 DHGFQIVAESILEEAGKFYEILVVE 156 (225)
T ss_dssp HTTEEEEEEEEEEETTEEEEEEEEE
T ss_pred HCCCEEEEEEEEEECCEEEEEEEEE
Confidence 999998865432 23 34555543
No 113
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=97.18 E-value=0.0044 Score=51.68 Aligned_cols=111 Identities=14% Similarity=0.041 Sum_probs=80.6
Q ss_pred CCCeEEEec------------CCCCceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCCCC---cceEeccccc
Q 036440 27 RLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSIPP---VCMIPLRLGY 83 (181)
Q Consensus 27 ~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~P~---~d~~~~~~~~ 83 (181)
.-.+|+||| ..|..+++..|. |..++.|. ..+||++..+|.++.++. .|++
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~I------ 94 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTI------ 94 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEE------
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEE------
Confidence 446899999 678889999998 45555443 367999999999988754 5776
Q ss_pred hhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----ccCCHHHHHHHHH
Q 036440 84 SHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-----KLSTEKELESLFV 158 (181)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-----~eRt~~E~~~Ll~ 158 (181)
++..+. -+--.+||......++++| .-...++++++|.
T Consensus 95 ---------------------------------viaGmG----g~lI~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L~ 137 (230)
T 3lec_A 95 ---------------------------------TICGMG----GRLIADILNNDIDKLQHVKTLVLQPNNREDDLRKWLA 137 (230)
T ss_dssp ---------------------------------EEEEEC----HHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHH
T ss_pred ---------------------------------EEeCCc----hHHHHHHHHHHHHHhCcCCEEEEECCCChHHHHHHHH
Confidence 444333 4556778888888888877 3456899999999
Q ss_pred hCCCeEEEEEEc--CC-CCeEEEEE
Q 036440 159 EVHFHHYKITPL--FG-LPSLIEVY 180 (181)
Q Consensus 159 ~aGf~~~~i~~~--~~-~~~viE~~ 180 (181)
+.||.+.+-.-+ .+ ...+|.+.
T Consensus 138 ~~Gf~i~~E~lv~e~~~~Yeii~~~ 162 (230)
T 3lec_A 138 ANDFEIVAEDILTENDKRYEILVVK 162 (230)
T ss_dssp HTTEEEEEEEEEEC--CEEEEEEEE
T ss_pred HCCCEEEEEEEEEECCEEEEEEEEE
Confidence 999999876533 22 34566554
No 114
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.18 E-value=0.00063 Score=56.12 Aligned_cols=50 Identities=14% Similarity=0.160 Sum_probs=40.2
Q ss_pred eeeeeeccCChHHHHHHHHHHHHHhccCC------------------------------ccCCHHHHHHHHHhCCCeEEE
Q 036440 117 NMQIIIHVFGDEESVKILKICREAITSKA------------------------------KLSTEKELESLFVEVHFHHYK 166 (181)
Q Consensus 117 ~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------------------------------~eRt~~E~~~Ll~~aGf~~~~ 166 (181)
+...+||.++|-. +.|++++..++||| +-.|.++|..+|+++||+.++
T Consensus 140 ~~~~~l~~~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 217 (292)
T 2aot_A 140 HMIQMLYYVKDIP--ATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLDNLGLKYEC 217 (292)
T ss_dssp EEESCGGGCSCHH--HHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHHHHTCCEEE
T ss_pred EEeeeeeecCCHH--HHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHHHCCCceEE
Confidence 7888888887754 47888888888888 135789999999999999877
Q ss_pred EE
Q 036440 167 IT 168 (181)
Q Consensus 167 i~ 168 (181)
..
T Consensus 218 ~~ 219 (292)
T 2aot_A 218 YD 219 (292)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 115
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.16 E-value=0.0011 Score=51.37 Aligned_cols=81 Identities=14% Similarity=0.231 Sum_probs=62.6
Q ss_pred cCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc----CCCceEEecCCCCCCCC--cceEeccccchhhhH
Q 036440 26 ERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD----TNNLKYLADDFFQSIPP--VCMIPLRLGYSHIKI 88 (181)
Q Consensus 26 ~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~----~~ri~~~~gDff~~~P~--~d~~~~~~~~~~~~~ 88 (181)
....+|||+| +--..+.+.+|. |..++.+.. .++++++.+|+.+..|. .|++
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v----------- 118 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLI----------- 118 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEE-----------
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEE-----------
Confidence 3457899999 111347889998 566665542 45899999999875443 5888
Q ss_pred HhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCCh-HHHHHHHHHHHHHhccCC
Q 036440 89 MIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGD-EESVKILKICREAITSKA 145 (181)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D-~~~~~iL~~~~~a~~~~g 145 (181)
++..++|.++| +...++|++++..++|||
T Consensus 119 ----------------------------~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG 148 (216)
T 3ofk_A 119 ----------------------------VVAEVLYYLEDMTQMRTAIDNMVKMLAPGG 148 (216)
T ss_dssp ----------------------------EEESCGGGSSSHHHHHHHHHHHHHTEEEEE
T ss_pred ----------------------------EEccHHHhCCCHHHHHHHHHHHHHHcCCCC
Confidence 88899999987 566799999999999999
No 116
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.15 E-value=3.9e-05 Score=65.60 Aligned_cols=90 Identities=18% Similarity=0.152 Sum_probs=67.5
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-----CCCceEEecCCCCCCCC-cc
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQSIPP-VC 75 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~~~P~-~d 75 (181)
..+++.+ +...-.+|+|+| .+|..+.+.+|. |..++.+.. ..+++++.+|+++..+. .|
T Consensus 186 ~~ll~~l--~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~fD 263 (343)
T 2pjd_A 186 QLLLSTL--TPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFD 263 (343)
T ss_dssp HHHHHHS--CTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEE
T ss_pred HHHHHhc--CcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCee
Confidence 5566666 233456899999 679899999999 455655542 33467889999875444 68
Q ss_pred eEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeecc---CChHHHHHHHHHHHHHhccCC
Q 036440 76 MIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHV---FGDEESVKILKICREAITSKA 145 (181)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHd---w~D~~~~~iL~~~~~a~~~~g 145 (181)
++ +....+|. ++.+...++|+.++..++|||
T Consensus 264 ~I---------------------------------------v~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG 297 (343)
T 2pjd_A 264 MI---------------------------------------ISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGG 297 (343)
T ss_dssp EE---------------------------------------EECCCCCSSSHHHHHHHHHHHHHHGGGEEEEE
T ss_pred EE---------------------------------------EECCCcccCccCCHHHHHHHHHHHHHhCCCCc
Confidence 88 77777776 456778899999999999999
No 117
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.09 E-value=0.0012 Score=50.84 Aligned_cols=94 Identities=14% Similarity=0.109 Sum_probs=69.5
Q ss_pred CCeEEEec------------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCCCCC--cceEeccccchhh
Q 036440 28 LGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQSIPP--VCMIPLRLGYSHI 86 (181)
Q Consensus 28 ~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~~P~--~d~~~~~~~~~~~ 86 (181)
-.+++|+| .+|+.+.+.+|. |..++.+.. .+++++..+|+.+..|. .|++
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i--------- 136 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGV--------- 136 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEE---------
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEE---------
Confidence 57999999 579999999998 666665532 23599999999875443 5777
Q ss_pred hHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------ccCCHHHHHHHHHhC
Q 036440 87 KIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------KLSTEKELESLFVEV 160 (181)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------~eRt~~E~~~Ll~~a 160 (181)
+.. .++ ...++|+.++..++||| .....++.++++.
T Consensus 137 ------------------------------~~~-~~~-----~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~-- 178 (207)
T 1jsx_A 137 ------------------------------ISR-AFA-----SLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE-- 178 (207)
T ss_dssp ------------------------------ECS-CSS-----SHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--
T ss_pred ------------------------------EEe-ccC-----CHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--
Confidence 322 122 23589999999999999 4467788888876
Q ss_pred CCeEEEEE
Q 036440 161 HFHHYKIT 168 (181)
Q Consensus 161 Gf~~~~i~ 168 (181)
||..+++.
T Consensus 179 g~~~~~~~ 186 (207)
T 1jsx_A 179 EYQVESVV 186 (207)
T ss_dssp TEEEEEEE
T ss_pred CCceeeee
Confidence 99988854
No 118
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.08 E-value=0.00051 Score=54.71 Aligned_cols=100 Identities=16% Similarity=0.134 Sum_probs=69.9
Q ss_pred cCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-----CCCceEEecCCCC---CCCC--cceEeccccc
Q 036440 26 ERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQ---SIPP--VCMIPLRLGY 83 (181)
Q Consensus 26 ~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~---~~P~--~d~~~~~~~~ 83 (181)
..-.+||||| +++..+.+.+|+ |..++.+.. ..+++++.+|+.+ ++|. .|++
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V------ 132 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGI------ 132 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEE------
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEE------
Confidence 3456899999 444457899998 566655532 4689999999875 3443 5777
Q ss_pred hhhhHHhhhhhhhhcCCCccchhhhhhccccccee-ee--eeccCChHHHHHHHHHHHHHhccCCccC------------
Q 036440 84 SHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINM-QI--IIHVFGDEESVKILKICREAITSKAKLS------------ 148 (181)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~--iLHdw~D~~~~~iL~~~~~a~~~~g~eR------------ 148 (181)
+. .. ..|++..+...++|+.++..++|||+..
T Consensus 133 ---------------------------------~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~ 179 (236)
T 1zx0_A 133 ---------------------------------LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMK 179 (236)
T ss_dssp ---------------------------------EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTT
T ss_pred ---------------------------------EECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhc
Confidence 22 12 4567766667789999999999999221
Q ss_pred ---------CHHHHHHHHHhCCCeE
Q 036440 149 ---------TEKELESLFVEVHFHH 164 (181)
Q Consensus 149 ---------t~~E~~~Ll~~aGf~~ 164 (181)
..+++...|.++||+.
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 180 SKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp TTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred hhhhhhhhhccHHHHHHHHHCCCCC
Confidence 1245567889999984
No 119
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=96.97 E-value=0.002 Score=48.68 Aligned_cols=93 Identities=13% Similarity=0.021 Sum_probs=67.6
Q ss_pred hcCCCeEEEecCCCCceEEEeec-hhhhhhhcc--CCCceEEecCCCCC-C---CC--cceEeccccchhhhHHhhhhhh
Q 036440 25 FERLGSLVDVGAFPCVKCTEFDQ-PHVVANLLD--TNNLKYLADDFFQS-I---PP--VCMIPLRLGYSHIKIMIAFFIR 95 (181)
Q Consensus 25 ~~~~~~lvDvG~~P~l~~~~~Dl-P~Vv~~a~~--~~ri~~~~gDff~~-~---P~--~d~~~~~~~~~~~~~~~~~~~~ 95 (181)
...-.+++|+|.-. +.+|. |..++.+.. ..++++..+|+-+. . |. .|++
T Consensus 10 ~~~g~~vL~~~~g~----v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V------------------ 67 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDII------------------ 67 (176)
T ss_dssp CCTTSEEEEEECTT----SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEE------------------
T ss_pred CCCCCEEEEecCCc----eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEE------------------
Confidence 34457899998432 12665 445555542 34699999998752 2 33 5888
Q ss_pred hhcCCCccchhhhhhcccccceeeeeeccC-ChHHHHHHHHHHHHHhccCC----------------ccCCHHHHHHHHH
Q 036440 96 LVVGRGRLHIFSWLNFMKRVINMQIIIHVF-GDEESVKILKICREAITSKA----------------KLSTEKELESLFV 158 (181)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw-~D~~~~~iL~~~~~a~~~~g----------------~eRt~~E~~~Ll~ 158 (181)
+...++|.. .|. .++|++++..++||| ..++.++|.++|+
T Consensus 68 ---------------------~~~~~l~~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (176)
T 2ld4_A 68 ---------------------LSGLVPGSTTLHS--AEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALT 124 (176)
T ss_dssp ---------------------EECCSTTCCCCCC--HHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHH
T ss_pred ---------------------EECChhhhcccCH--HHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHH
Confidence 777888887 554 679999999999999 2357999999999
Q ss_pred hCCC
Q 036440 159 EVHF 162 (181)
Q Consensus 159 ~aGf 162 (181)
++||
T Consensus 125 ~aGf 128 (176)
T 2ld4_A 125 LSGL 128 (176)
T ss_dssp HTTC
T ss_pred HCCC
Confidence 9999
No 120
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=96.95 E-value=0.0031 Score=48.64 Aligned_cols=91 Identities=12% Similarity=0.129 Sum_probs=64.8
Q ss_pred CCCeEEEec--------CCCCc-eEEEeec-hhhhhhhcc-CCCceEEecCCCC-CCCC--cceEeccccchhhhHHhhh
Q 036440 27 RLGSLVDVG--------AFPCV-KCTEFDQ-PHVVANLLD-TNNLKYLADDFFQ-SIPP--VCMIPLRLGYSHIKIMIAF 92 (181)
Q Consensus 27 ~~~~lvDvG--------~~P~l-~~~~~Dl-P~Vv~~a~~-~~ri~~~~gDff~-~~P~--~d~~~~~~~~~~~~~~~~~ 92 (181)
.-.+|+|+| .. +. +.+.+|. |..++.+.. .++++++.+|+.+ ++|. .|++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v--------------- 99 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVV--------------- 99 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEE---------------
T ss_pred CCCeEEEECCCCCHhHHhC-CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEE---------------
Confidence 557999999 23 34 8899998 556665543 3789999999875 2333 5888
Q ss_pred hhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC---------------------------
Q 036440 93 FIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA--------------------------- 145 (181)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g--------------------------- 145 (181)
++..++|.++|. .++|++++..++|||
T Consensus 100 ------------------------~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 153 (211)
T 2gs9_A 100 ------------------------LLFTTLEFVEDV--ERVLLEARRVLRPGGALVVGVLEALSPWAALYRRLGEKGVLP 153 (211)
T ss_dssp ------------------------EEESCTTTCSCH--HHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHHHHHTTCTT
T ss_pred ------------------------EEcChhhhcCCH--HHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHHHhhccCcc
Confidence 666677766543 457777777777776
Q ss_pred ----ccCCHHHHHHHHHhCC
Q 036440 146 ----KLSTEKELESLFVEVH 161 (181)
Q Consensus 146 ----~eRt~~E~~~Ll~~aG 161 (181)
+..|.+|++++|+ |
T Consensus 154 ~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 154 WAQARFLAREDLKALLG--P 171 (211)
T ss_dssp GGGCCCCCHHHHHHHHC--S
T ss_pred ccccccCCHHHHHHHhc--C
Confidence 3368999999998 7
No 121
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.94 E-value=0.001 Score=60.33 Aligned_cols=82 Identities=12% Similarity=0.084 Sum_probs=59.0
Q ss_pred hcCCCeEEEec-----------CCCCceEEEeechhhhhhhc-------cCCCceEEecCCCC-CCCC-cceEeccccch
Q 036440 25 FERLGSLVDVG-----------AFPCVKCTEFDQPHVVANLL-------DTNNLKYLADDFFQ-SIPP-VCMIPLRLGYS 84 (181)
Q Consensus 25 ~~~~~~lvDvG-----------~~P~l~~~~~DlP~Vv~~a~-------~~~ri~~~~gDff~-~~P~-~d~~~~~~~~~ 84 (181)
...-.+|+||| +.|..+.+.+|+...++.+. ..++|+++.+|+.+ ++|. .|++
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~I------- 228 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDII------- 228 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEE-------
T ss_pred hcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEE-------
Confidence 33457999999 66788999999987555443 24799999999997 5554 6888
Q ss_pred hhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC
Q 036440 85 HIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA 145 (181)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g 145 (181)
+...++|.+.+++....|..++..++|||
T Consensus 229 --------------------------------vs~~~~~~~~~e~~~~~l~~~~~~LkpgG 257 (480)
T 3b3j_A 229 --------------------------------ISEPMGYMLFNERMLESYLHAKKYLKPSG 257 (480)
T ss_dssp --------------------------------ECCCCHHHHTCHHHHHHHHHGGGGEEEEE
T ss_pred --------------------------------EEeCchHhcCcHHHHHHHHHHHHhcCCCC
Confidence 44444555666666666666677777776
No 122
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=96.90 E-value=0.0062 Score=47.61 Aligned_cols=102 Identities=15% Similarity=0.079 Sum_probs=70.3
Q ss_pred CCeEEEec------------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCC---CCC--cceEeccccc
Q 036440 28 LGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQS---IPP--VCMIPLRLGY 83 (181)
Q Consensus 28 ~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~---~P~--~d~~~~~~~~ 83 (181)
-.++||+| .+|+.+.+.+|. |..++.+.. .++++++.+|+.+- +|. .|.+
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i------ 115 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRL------ 115 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEE------
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEE------
Confidence 46899999 789999999998 666665542 26899999999861 333 4666
Q ss_pred hhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChH-------HHHHHHHHHHHHhccCC----ccC---C
Q 036440 84 SHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDE-------ESVKILKICREAITSKA----KLS---T 149 (181)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~-------~~~~iL~~~~~a~~~~g----~eR---t 149 (181)
++.... .|... ....+|+.++..++||| ..- .
T Consensus 116 ---------------------------------~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 161 (214)
T 1yzh_A 116 ---------------------------------YLNFSD-PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGL 161 (214)
T ss_dssp ---------------------------------EEESCC-CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHH
T ss_pred ---------------------------------EEECCC-CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHH
Confidence 222111 12111 13579999999999999 221 2
Q ss_pred HHHHHHHHHhCCCeEEEEEE
Q 036440 150 EKELESLFVEVHFHHYKITP 169 (181)
Q Consensus 150 ~~E~~~Ll~~aGf~~~~i~~ 169 (181)
.++..++++++||..+.+..
T Consensus 162 ~~~~~~~~~~~g~~~~~~~~ 181 (214)
T 1yzh_A 162 FEYSLVSFSQYGMKLNGVWL 181 (214)
T ss_dssp HHHHHHHHHHHTCEEEEEES
T ss_pred HHHHHHHHHHCCCeeeeccc
Confidence 35667788999999888763
No 123
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=96.87 E-value=0.0088 Score=46.80 Aligned_cols=127 Identities=12% Similarity=0.048 Sum_probs=76.1
Q ss_pred hcCCCeEEEecCC-C-----------CceEEEeec-hhhhhhhcc-----CCCceEEecCC--CCCCCC--cceEecccc
Q 036440 25 FERLGSLVDVGAF-P-----------CVKCTEFDQ-PHVVANLLD-----TNNLKYLADDF--FQSIPP--VCMIPLRLG 82 (181)
Q Consensus 25 ~~~~~~lvDvG~~-P-----------~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDf--f~~~P~--~d~~~~~~~ 82 (181)
.+.-.+|+|+|.- . ..+.+.+|. |..++.+.. ..+++++.+|+ ++.+|. .|++..+.-
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCC
Confidence 4456799999944 2 567899998 666665542 23899999996 555653 688744433
Q ss_pred chhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC--------ccCCHHHHH
Q 036440 83 YSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA--------KLSTEKELE 154 (181)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g--------~eRt~~E~~ 154 (181)
|....-.-. .+ ... .+..-.| ..+...++|+.+...++||| +..+.+++.
T Consensus 133 ~~~~~~~~~-----~~-----~~~----------~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 190 (230)
T 3evz_A 133 YYDKPLGRV-----LT-----ERE----------AIGGGKY--GEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIK 190 (230)
T ss_dssp CC-----------------------------------CCSS--SCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHH
T ss_pred CcCCccccc-----cC-----hhh----------hhccCcc--chHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHH
Confidence 211100000 00 000 0000001 12334789999999999999 234568899
Q ss_pred HHHHhCCCeEEEEEEcCCC
Q 036440 155 SLFVEVHFHHYKITPLFGL 173 (181)
Q Consensus 155 ~Ll~~aGf~~~~i~~~~~~ 173 (181)
++++++||....+....|.
T Consensus 191 ~~l~~~g~~~~~~~~~~g~ 209 (230)
T 3evz_A 191 ERGIKLGYSVKDIKFKVGT 209 (230)
T ss_dssp HHHHHTTCEEEEEEECCCC
T ss_pred HHHHHcCCceEEEEecCCC
Confidence 9999999988777655553
No 124
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=96.84 E-value=0.00067 Score=54.85 Aligned_cols=105 Identities=15% Similarity=0.109 Sum_probs=66.5
Q ss_pred CCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-----CCCceEEecCCCC---CCCC--cceEeccccch
Q 036440 27 RLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQ---SIPP--VCMIPLRLGYS 84 (181)
Q Consensus 27 ~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~---~~P~--~d~~~~~~~~~ 84 (181)
.-.+||||| ++...+.+.+|+ |.+++.++. ..+++++.+|+-+ .+|. -|.+..+.-
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~-- 137 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY-- 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC--
T ss_pred CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee--
Confidence 446899999 333346788887 778877652 5678888888753 3443 366511110
Q ss_pred hhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCCc------------------
Q 036440 85 HIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKAK------------------ 146 (181)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g~------------------ 146 (181)
.....+ +.-.+..++++.++..|+|||+
T Consensus 138 --------------------------------~~~~~~--~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~ 183 (236)
T 3orh_A 138 --------------------------------PLSEET--WHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYS 183 (236)
T ss_dssp --------------------------------CCBGGG--TTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCS
T ss_pred --------------------------------ecccch--hhhcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhh
Confidence 122222 3334456688888999999981
Q ss_pred ---cCCHHHHHHHHHhCCCeEEEE
Q 036440 147 ---LSTEKELESLFVEVHFHHYKI 167 (181)
Q Consensus 147 ---eRt~~E~~~Ll~~aGf~~~~i 167 (181)
....+.+...|.++||+...+
T Consensus 184 ~~~~~~~~~~~~~L~eaGF~~~~i 207 (236)
T 3orh_A 184 DITIMFEETQVPALLEAGFRRENI 207 (236)
T ss_dssp CHHHHHHHHTHHHHHHHTCCGGGE
T ss_pred hhhhhhHHHHHHHHHHcCCeEEEE
Confidence 133556778889999986543
No 125
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=96.83 E-value=0.0064 Score=49.80 Aligned_cols=132 Identities=12% Similarity=0.134 Sum_probs=79.0
Q ss_pred hcCCCeEEEec------------CCCCceEEEeec-hhhhhhhc----------cCCCceEEecCCCCC--------CCC
Q 036440 25 FERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLL----------DTNNLKYLADDFFQS--------IPP 73 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~----------~~~ri~~~~gDff~~--------~P~ 73 (181)
...-.+|||+| ++|..+.+.+|+ |..++.+. ..+|++++.+|+.+. +|.
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 34456899999 789999999998 56665443 134799999999875 333
Q ss_pred --cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------
Q 036440 74 --VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------ 145 (181)
Q Consensus 74 --~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------ 145 (181)
.|++..+--|.... .+.++. ..+.+-+.........+++.+...++|+|
T Consensus 114 ~~fD~Vv~nPPy~~~~------~~~~~~-----------------~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAG------DRRTPD-----------------ALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp TCEEEEEECCCC--------------------------------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcCEEEECCCCcCCC------CCCCcC-----------------HHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 58884443321000 000000 00112222333446789999999999999
Q ss_pred ccCCHHHHHHHHHhCCCeEEEEEEcCC---C---CeEEEEE
Q 036440 146 KLSTEKELESLFVEVHFHHYKITPLFG---L---PSLIEVY 180 (181)
Q Consensus 146 ~eRt~~E~~~Ll~~aGf~~~~i~~~~~---~---~~viE~~ 180 (181)
.....+++.+++.+. |..+++.+... . .-+||+.
T Consensus 171 ~~~~~~~~~~~l~~~-~~~~~i~~v~~~~~~~~~~~lv~~~ 210 (260)
T 2ozv_A 171 RPQSVAEIIAACGSR-FGGLEITLIHPRPGEDAVRMLVTAI 210 (260)
T ss_dssp CGGGHHHHHHHHTTT-EEEEEEEEEESSTTSCCCEEEEEEE
T ss_pred cHHHHHHHHHHHHhc-CCceEEEEEcCCCCCCceEEEEEEE
Confidence 444677888888875 88877765432 1 2466664
No 126
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=96.78 E-value=0.0065 Score=51.42 Aligned_cols=29 Identities=21% Similarity=0.268 Sum_probs=22.4
Q ss_pred eeeeeecc-CChHHHHHHHHHHHHHhccCC
Q 036440 117 NMQIIIHV-FGDEESVKILKICREAITSKA 145 (181)
Q Consensus 117 ~l~~iLHd-w~D~~~~~iL~~~~~a~~~~g 145 (181)
....++|. |++++..++|++++..++|||
T Consensus 134 ~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG 163 (302)
T 2vdw_A 134 DWQFAIHYSFHPRHYATVMNNLSELTASGG 163 (302)
T ss_dssp EEESCGGGTCSTTTHHHHHHHHHHHEEEEE
T ss_pred EECchHHHhCCHHHHHHHHHHHHHHcCCCC
Confidence 66667775 565556789999999999988
No 127
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=96.78 E-value=0.013 Score=49.33 Aligned_cols=99 Identities=9% Similarity=-0.009 Sum_probs=74.5
Q ss_pred CCCeEEEec------------CCCCceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCCCC---cceEeccccc
Q 036440 27 RLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSIPP---VCMIPLRLGY 83 (181)
Q Consensus 27 ~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~P~---~d~~~~~~~~ 83 (181)
.-.+|+||| ..|..+++..|. |..++.|. ..+||++..+|.++.++. .|++
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~I------ 94 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTI------ 94 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEE------
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEE------
Confidence 446899999 778889999998 44555443 367999999999988763 5776
Q ss_pred hhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----ccCCHHHHHHHHH
Q 036440 84 SHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-----KLSTEKELESLFV 158 (181)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-----~eRt~~E~~~Ll~ 158 (181)
++..+ +-+--.+||......+++++ .-...++.+++|.
T Consensus 95 ---------------------------------viagm----Gg~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~ 137 (244)
T 3gnl_A 95 ---------------------------------VIAGM----GGTLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSE 137 (244)
T ss_dssp ---------------------------------EEEEE----CHHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHH
T ss_pred ---------------------------------EEeCC----chHHHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHH
Confidence 43333 24556678888888887776 4457899999999
Q ss_pred hCCCeEEEEE
Q 036440 159 EVHFHHYKIT 168 (181)
Q Consensus 159 ~aGf~~~~i~ 168 (181)
+.||.+++-.
T Consensus 138 ~~Gf~i~~E~ 147 (244)
T 3gnl_A 138 QNNWLITSEA 147 (244)
T ss_dssp HHTEEEEEEE
T ss_pred HCCCEEEEEE
Confidence 9999986544
No 128
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=96.70 E-value=0.012 Score=48.87 Aligned_cols=76 Identities=18% Similarity=0.217 Sum_probs=58.0
Q ss_pred CCeEEEec----------CCCCceEEEeec-hhhhhhhccCCCceEEecCCCC-CCCC--cceEeccccchhhhHHhhhh
Q 036440 28 LGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLDTNNLKYLADDFFQ-SIPP--VCMIPLRLGYSHIKIMIAFF 93 (181)
Q Consensus 28 ~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~~~ri~~~~gDff~-~~P~--~d~~~~~~~~~~~~~~~~~~ 93 (181)
-.++|||| +--..+.+.+|. |..++.+...++|+++.+|+-+ ++|. .|++
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v---------------- 103 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVA---------------- 103 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEE----------------
T ss_pred CCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEE----------------
Confidence 36899999 112346788897 5677788778899999999865 3554 5888
Q ss_pred hhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC
Q 036440 94 IRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA 145 (181)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g 145 (181)
+...++|-++.+ +.|+.++..++|||
T Consensus 104 -----------------------~~~~~~h~~~~~---~~~~e~~rvLkpgG 129 (257)
T 4hg2_A 104 -----------------------IAAQAMHWFDLD---RFWAELRRVARPGA 129 (257)
T ss_dssp -----------------------EECSCCTTCCHH---HHHHHHHHHEEEEE
T ss_pred -----------------------EEeeehhHhhHH---HHHHHHHHHcCCCC
Confidence 778888876544 47889999999999
No 129
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=96.64 E-value=0.011 Score=42.86 Aligned_cols=107 Identities=16% Similarity=0.198 Sum_probs=74.6
Q ss_pred HHHHhhhhhcCCCeEEEec------------CC-CCceEEEeechhhhhhhccCCCceEEecCCCCC---------CCC-
Q 036440 17 ALKYCKQIFERLGSLVDVG------------AF-PCVKCTEFDQPHVVANLLDTNNLKYLADDFFQS---------IPP- 73 (181)
Q Consensus 17 ~l~~~~~d~~~~~~lvDvG------------~~-P~l~~~~~DlP~Vv~~a~~~~ri~~~~gDff~~---------~P~- 73 (181)
+++.+. -...-.+++|+| .+ |+.+.+.+|+...+ . .+++++..+|+.+. +|.
T Consensus 13 ~~~~~~-~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~-~---~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 13 IQQSDK-LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMD-P---IVGVDFLQGDFRDELVMKALLERVGDS 87 (180)
T ss_dssp HHHHHC-CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCC-C---CTTEEEEESCTTSHHHHHHHHHHHTTC
T ss_pred HHHHhC-CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcccc-c---cCcEEEEEcccccchhhhhhhccCCCC
Confidence 444442 134567999999 33 67899999987622 2 27899999999864 442
Q ss_pred -cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChH---H------HHHHHHHHHHHhcc
Q 036440 74 -VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDE---E------SVKILKICREAITS 143 (181)
Q Consensus 74 -~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~---~------~~~iL~~~~~a~~~ 143 (181)
.|++ +....+|...+. . ..++|+.+...++|
T Consensus 88 ~~D~i---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 128 (180)
T 1ej0_A 88 KVQVV---------------------------------------MSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAP 128 (180)
T ss_dssp CEEEE---------------------------------------EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred ceeEE---------------------------------------EECCCccccCCCccchHHHHHHHHHHHHHHHHHcCC
Confidence 5777 555555544332 1 26889999999999
Q ss_pred CC-------ccCCHHHHHHHHHhCCCeEEEEE
Q 036440 144 KA-------KLSTEKELESLFVEVHFHHYKIT 168 (181)
Q Consensus 144 ~g-------~eRt~~E~~~Ll~~aGf~~~~i~ 168 (181)
+| ...+..++...+.+. |+.+++.
T Consensus 129 gG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 159 (180)
T 1ej0_A 129 GGSFVVKVFQGEGFDEYLREIRSL-FTKVKVR 159 (180)
T ss_dssp EEEEEEEEESSTTHHHHHHHHHHH-EEEEEEE
T ss_pred CcEEEEEEecCCcHHHHHHHHHHh-hhhEEee
Confidence 99 455677888888885 8888765
No 130
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=96.61 E-value=0.013 Score=48.55 Aligned_cols=102 Identities=9% Similarity=0.080 Sum_probs=69.4
Q ss_pred CCCeEEEec-----------CCCCceEEEeec--hhhhhhhcc------------C----CCceEEecCCCCC---C---
Q 036440 27 RLGSLVDVG-----------AFPCVKCTEFDQ--PHVVANLLD------------T----NNLKYLADDFFQS---I--- 71 (181)
Q Consensus 27 ~~~~lvDvG-----------~~P~l~~~~~Dl--P~Vv~~a~~------------~----~ri~~~~gDff~~---~--- 71 (181)
.-.+|+|+| +....+++.+|+ |..++.+.. . +++++...|+-+. +
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 446899999 344448999999 566654431 1 3788876665432 2
Q ss_pred ---CCcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhc---c--
Q 036440 72 ---PPVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAIT---S-- 143 (181)
Q Consensus 72 ---P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~---~-- 143 (181)
...|++ ++..++|+. +....+|+.+...++ |
T Consensus 159 ~~~~~fD~I---------------------------------------i~~dvl~~~--~~~~~ll~~l~~~Lk~~~p~~ 197 (281)
T 3bzb_A 159 TGLQRFQVV---------------------------------------LLADLLSFH--QAHDALLRSVKMLLALPANDP 197 (281)
T ss_dssp HSCSSBSEE---------------------------------------EEESCCSCG--GGHHHHHHHHHHHBCCTTTCT
T ss_pred ccCCCCCEE---------------------------------------EEeCcccCh--HHHHHHHHHHHHHhcccCCCC
Confidence 125776 777888764 445678999999999 8
Q ss_pred CC------cc------CCHHHHHHHHHhCC-CeEEEEEE
Q 036440 144 KA------KL------STEKELESLFVEVH-FHHYKITP 169 (181)
Q Consensus 144 ~g------~e------Rt~~E~~~Ll~~aG-f~~~~i~~ 169 (181)
+| .. .+..++.+.++++| |++.++..
T Consensus 198 gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~~~~ 236 (281)
T 3bzb_A 198 TAVALVTFTHHRPHLAERDLAFFRLVNADGALIAEPWLS 236 (281)
T ss_dssp TCEEEEEECC--------CTHHHHHHHHSTTEEEEEEEC
T ss_pred CCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEEEecc
Confidence 88 11 12457778899999 99988843
No 131
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=96.60 E-value=0.024 Score=45.66 Aligned_cols=47 Identities=11% Similarity=0.063 Sum_probs=33.4
Q ss_pred cCCCeEEEec------------CCCCceEEEeech-h-hhhhh---cc------CCCceEEecCCCCCCCC
Q 036440 26 ERLGSLVDVG------------AFPCVKCTEFDQP-H-VVANL---LD------TNNLKYLADDFFQSIPP 73 (181)
Q Consensus 26 ~~~~~lvDvG------------~~P~l~~~~~DlP-~-Vv~~a---~~------~~ri~~~~gDff~~~P~ 73 (181)
..-.+||||| ++|+.+++.+|+- . .++.+ .. .++++++.+|.-+ +|.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~-l~~ 92 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAES-LPF 92 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTB-CCG
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHH-hhh
Confidence 3456899999 4999999999984 4 43433 32 3578999999864 353
No 132
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.59 E-value=0.00045 Score=60.55 Aligned_cols=89 Identities=16% Similarity=0.256 Sum_probs=63.3
Q ss_pred HHHHHhhhhhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-------C--CCceEEecCCCCCCCC
Q 036440 16 LALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-------T--NNLKYLADDFFQSIPP 73 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-------~--~ri~~~~gDff~~~P~ 73 (181)
.+++..+ ...-.+|+|+| ++|..+.+.+|. |..++.+.. . .++++..+|+++.+|.
T Consensus 213 ~ll~~l~--~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~ 290 (375)
T 4dcm_A 213 FFMQHLP--ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 290 (375)
T ss_dssp HHHHTCC--CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCT
T ss_pred HHHHhCc--ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCC
Confidence 4555552 23337999999 889999999998 666665532 2 2688899999998774
Q ss_pred --cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeecc---CChHHHHHHHHHHHHHhccCC
Q 036440 74 --VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHV---FGDEESVKILKICREAITSKA 145 (181)
Q Consensus 74 --~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHd---w~D~~~~~iL~~~~~a~~~~g 145 (181)
.|++ ++.-.+|. ..++...++++.+...++|||
T Consensus 291 ~~fD~I---------------------------------------i~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG 328 (375)
T 4dcm_A 291 FRFNAV---------------------------------------LCNPPFHQQHALTDNVAWEMFHHARRCLKING 328 (375)
T ss_dssp TCEEEE---------------------------------------EECCCC-------CCHHHHHHHHHHHHEEEEE
T ss_pred CCeeEE---------------------------------------EECCCcccCcccCHHHHHHHHHHHHHhCCCCc
Confidence 6888 45444552 345566689999999999999
No 133
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=96.59 E-value=0.0033 Score=50.29 Aligned_cols=99 Identities=14% Similarity=0.194 Sum_probs=68.6
Q ss_pred cCCCeEEEec----------C--CCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCC-C----C-CcceEecc
Q 036440 26 ERLGSLVDVG----------A--FPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQS-I----P-PVCMIPLR 80 (181)
Q Consensus 26 ~~~~~lvDvG----------~--~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~-~----P-~~d~~~~~ 80 (181)
..-.+|+|+| + +|+.+.+.+|. |..++.+.. -.+++++.+|+.+- . + ..|++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V--- 145 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIV--- 145 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEE---
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEE---
Confidence 3557999999 3 89999999998 555554432 24699999998652 1 1 25777
Q ss_pred ccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------ccCCH---H
Q 036440 81 LGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------KLSTE---K 151 (181)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------~eRt~---~ 151 (181)
+...+ .....+++.+...++||| ..+.. +
T Consensus 146 ------------------------------------~~~~~------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~ 183 (240)
T 1xdz_A 146 ------------------------------------TARAV------ARLSVLSELCLPLVKKNGLFVALKAASAEEELN 183 (240)
T ss_dssp ------------------------------------EEECC------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHH
T ss_pred ------------------------------------EEecc------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHH
Confidence 33321 235678999999999999 22233 3
Q ss_pred HHHHHHHhCCCeEEEEEE
Q 036440 152 ELESLFVEVHFHHYKITP 169 (181)
Q Consensus 152 E~~~Ll~~aGf~~~~i~~ 169 (181)
++...++++||...++.+
T Consensus 184 ~~~~~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 184 AGKKAITTLGGELENIHS 201 (240)
T ss_dssp HHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHcCCeEeEEEE
Confidence 566778899999887754
No 134
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=96.55 E-value=0.019 Score=43.82 Aligned_cols=37 Identities=16% Similarity=0.157 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhccCC-------ccCCHHHHHHHHHhCCCeEEEEE
Q 036440 131 VKILKICREAITSKA-------KLSTEKELESLFVEVHFHHYKIT 168 (181)
Q Consensus 131 ~~iL~~~~~a~~~~g-------~eRt~~E~~~Ll~~aGf~~~~i~ 168 (181)
.++|+.+...++||| ...+..++...+++ .|..+++.
T Consensus 134 ~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~-~f~~v~~~ 177 (201)
T 2plw_A 134 LSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKG-MFQLVHTT 177 (201)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHT-TEEEEEEC
T ss_pred HHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHH-HHheEEEE
Confidence 358999999999999 44567788888776 58877765
No 135
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=96.53 E-value=0.0031 Score=53.36 Aligned_cols=48 Identities=10% Similarity=0.198 Sum_probs=43.1
Q ss_pred CceEEecCCCCC-CC---CcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHH
Q 036440 59 NLKYLADDFFQS-IP---PVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKIL 134 (181)
Q Consensus 59 ri~~~~gDff~~-~P---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL 134 (181)
+|++..+|+++. +| .-|++ +.+++||.++++...+++
T Consensus 195 ~V~F~~~dl~~~~~~~~~~fDlI---------------------------------------~crnvliyf~~~~~~~vl 235 (274)
T 1af7_A 195 YVEFSSVNLLEKQYNVPGPFDAI---------------------------------------FCRNVMIYFDKTTQEDIL 235 (274)
T ss_dssp TEEEEECCTTCSSCCCCCCEEEE---------------------------------------EECSSGGGSCHHHHHHHH
T ss_pred cCeEEecccCCCCCCcCCCeeEE---------------------------------------EECCchHhCCHHHHHHHH
Confidence 799999999983 55 25888 889999999999999999
Q ss_pred HHHHHHhccCC
Q 036440 135 KICREAITSKA 145 (181)
Q Consensus 135 ~~~~~a~~~~g 145 (181)
++++.+++|||
T Consensus 236 ~~~~~~L~pgG 246 (274)
T 1af7_A 236 RRFVPLLKPDG 246 (274)
T ss_dssp HHHGGGEEEEE
T ss_pred HHHHHHhCCCc
Confidence 99999999999
No 136
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=96.50 E-value=0.019 Score=44.94 Aligned_cols=103 Identities=13% Similarity=0.025 Sum_probs=67.8
Q ss_pred hcCCCeEEEec------------C-CCCceEEEeechh-hhh----hhccCCCceEEecCCCCC-----CCC-cceEecc
Q 036440 25 FERLGSLVDVG------------A-FPCVKCTEFDQPH-VVA----NLLDTNNLKYLADDFFQS-----IPP-VCMIPLR 80 (181)
Q Consensus 25 ~~~~~~lvDvG------------~-~P~l~~~~~DlP~-Vv~----~a~~~~ri~~~~gDff~~-----~P~-~d~~~~~ 80 (181)
+..-.+|+|+| . -|..+.+.+|.-. .++ .+...++++++.+|+.+. ++. .|++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v--- 147 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVI--- 147 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEE---
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEE---
Confidence 44557899999 3 2567889999843 333 333347899999999862 122 4666
Q ss_pred ccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccC-ChHHHHHHHHHHHHHhccCC--------cc----
Q 036440 81 LGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVF-GDEESVKILKICREAITSKA--------KL---- 147 (181)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw-~D~~~~~iL~~~~~a~~~~g--------~e---- 147 (181)
+ ++. ..+....+|++++..++||| ..
T Consensus 148 ------------------------------------~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 186 (227)
T 1g8a_A 148 ------------------------------------F-----EDVAQPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVT 186 (227)
T ss_dssp ------------------------------------E-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTT
T ss_pred ------------------------------------E-----ECCCCHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCC
Confidence 3 222 23334455999999999999 11
Q ss_pred -----CCHHHHHHHHHhCCCeEEEEEEcCCC
Q 036440 148 -----STEKELESLFVEVHFHHYKITPLFGL 173 (181)
Q Consensus 148 -----Rt~~E~~~Ll~~aGf~~~~i~~~~~~ 173 (181)
.+.+|++.+ .++ |+.++...+...
T Consensus 187 ~~~~~~~~~~l~~l-~~~-f~~~~~~~~~~~ 215 (227)
T 1g8a_A 187 KEPEQVFREVEREL-SEY-FEVIERLNLEPY 215 (227)
T ss_dssp SCHHHHHHHHHHHH-HTT-SEEEEEEECTTT
T ss_pred CChhhhhHHHHHHH-Hhh-ceeeeEeccCcc
Confidence 123677777 778 999988876543
No 137
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=96.49 E-value=0.0081 Score=46.89 Aligned_cols=77 Identities=4% Similarity=0.025 Sum_probs=57.4
Q ss_pred hcCCCeEEEec------------CCC-CceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCCCC--------cc
Q 036440 25 FERLGSLVDVG------------AFP-CVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSIPP--------VC 75 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P-~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~P~--------~d 75 (181)
.....+|||+| ++| +.+.+.+|+ |..++.+. ..++++++.+|..+.+|. .|
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 45668999999 677 789999998 66666553 356899999999764332 45
Q ss_pred eEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC
Q 036440 76 MIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA 145 (181)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g 145 (181)
++ + .|.+.+....+|+.+...++|||
T Consensus 136 ~v---------------------------------------~-----~d~~~~~~~~~l~~~~~~L~pgG 161 (223)
T 3duw_A 136 FI---------------------------------------F-----IDADKQNNPAYFEWALKLSRPGT 161 (223)
T ss_dssp EE---------------------------------------E-----ECSCGGGHHHHHHHHHHTCCTTC
T ss_pred EE---------------------------------------E-----EcCCcHHHHHHHHHHHHhcCCCc
Confidence 55 2 23445566789999999999999
No 138
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.44 E-value=0.07 Score=46.57 Aligned_cols=25 Identities=0% Similarity=-0.001 Sum_probs=20.7
Q ss_pred ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 ~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
.-.|.++..+.|.++||+.++++.+
T Consensus 257 ~y~t~~~~~~r~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 257 TCKSLESQKERLLSNGWETASAVDM 281 (334)
T ss_dssp GGGCHHHHHHHHHTTTCSEEEEEEH
T ss_pred cCCCHHHHHHHHHHcCCCcceeecH
Confidence 3467799999999999999887754
No 139
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=96.42 E-value=0.013 Score=46.79 Aligned_cols=78 Identities=10% Similarity=0.184 Sum_probs=57.8
Q ss_pred hhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCCC----C-cceEe
Q 036440 24 IFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSIP----P-VCMIP 78 (181)
Q Consensus 24 d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~P----~-~d~~~ 78 (181)
......+|||+| ++|..+.+.+|+ |..++.+. ..++++++.+|+.+.+| . .|++
T Consensus 68 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V- 146 (232)
T 3ntv_A 68 RMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMI- 146 (232)
T ss_dssp HHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEE-
T ss_pred hhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEE-
Confidence 345678999999 568999999998 66666554 24699999999988655 2 5666
Q ss_pred ccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC
Q 036440 79 LRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA 145 (181)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g 145 (181)
+ .+.+.+....+|+.+...++|||
T Consensus 147 --------------------------------------~-----~~~~~~~~~~~l~~~~~~LkpgG 170 (232)
T 3ntv_A 147 --------------------------------------F-----IDAAKAQSKKFFEIYTPLLKHQG 170 (232)
T ss_dssp --------------------------------------E-----EETTSSSHHHHHHHHGGGEEEEE
T ss_pred --------------------------------------E-----EcCcHHHHHHHHHHHHHhcCCCe
Confidence 3 23344456678888888888888
No 140
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=96.39 E-value=0.0075 Score=51.87 Aligned_cols=31 Identities=19% Similarity=0.247 Sum_probs=23.0
Q ss_pred CCHHHHHHHHHhCCCeEEEEE--EcCCCCeEEE
Q 036440 148 STEKELESLFVEVHFHHYKIT--PLFGLPSLIE 178 (181)
Q Consensus 148 Rt~~E~~~Ll~~aGf~~~~i~--~~~~~~~viE 178 (181)
++.+++..+++++||.+..+. |+.|..+=+|
T Consensus 210 ~~~~~v~~~~~~~Gf~v~~~~~spi~g~~gn~e 242 (291)
T 3hp7_A 210 KVLETVTAFAVDYGFSVKGLDFSPIQGGHGNIE 242 (291)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEECSSCCGGGCCC
T ss_pred HHHHHHHHHHHHCCCEEEEEEECCCCCCCcCHH
Confidence 477889999999999988776 5555544333
No 141
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=96.30 E-value=0.013 Score=44.66 Aligned_cols=98 Identities=11% Similarity=0.110 Sum_probs=67.2
Q ss_pred hcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc----CCCceEEecCCCC-CCCC--cceEeccccch
Q 036440 25 FERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD----TNNLKYLADDFFQ-SIPP--VCMIPLRLGYS 84 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~----~~ri~~~~gDff~-~~P~--~d~~~~~~~~~ 84 (181)
...-.+|||+| ..+. +.+.+|. |..++.+.. .+++++..+|+.+ ++|. .|++
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v------- 111 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVV------- 111 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEE-------
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEE-------
Confidence 34567999999 3343 7889998 566665542 3689999999986 3443 5887
Q ss_pred hhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCC-------------hHHHHHHHHHHHHHhccCC----cc
Q 036440 85 HIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFG-------------DEESVKILKICREAITSKA----KL 147 (181)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~-------------D~~~~~iL~~~~~a~~~~g----~e 147 (181)
+...++|... .+...++|++++..++||| .+
T Consensus 112 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 112 --------------------------------LEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp --------------------------------EEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------------------------------EECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 4444444332 4566899999999999999 33
Q ss_pred CCHHH-HHHHHHhCCC
Q 036440 148 STEKE-LESLFVEVHF 162 (181)
Q Consensus 148 Rt~~E-~~~Ll~~aGf 162 (181)
.+... .+.++...||
T Consensus 160 ~~~~~~~~~~~~~~~~ 175 (215)
T 2pxx_A 160 SAAPHFRTRHYAQAYY 175 (215)
T ss_dssp SCCHHHHHHHHCCGGG
T ss_pred CCCcHHHHHHHhcccc
Confidence 33333 4556767777
No 142
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=96.25 E-value=0.066 Score=53.06 Aligned_cols=81 Identities=12% Similarity=0.097 Sum_probs=62.9
Q ss_pred cCCCeEEEec------------CC-CCceEEEeec-hhhhhhhcc------------CCCceEEecCCCCC-CC--Ccce
Q 036440 26 ERLGSLVDVG------------AF-PCVKCTEFDQ-PHVVANLLD------------TNNLKYLADDFFQS-IP--PVCM 76 (181)
Q Consensus 26 ~~~~~lvDvG------------~~-P~l~~~~~Dl-P~Vv~~a~~------------~~ri~~~~gDff~~-~P--~~d~ 76 (181)
..-.+||||| .. |..+.+.+|+ |..++.+.. .++++++.+|+.+- .+ ..|+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 3567999999 44 5578999998 566665532 25899999999863 22 2688
Q ss_pred EeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC
Q 036440 77 IPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA 145 (181)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g 145 (181)
+ ++..++|.+++....++++.+...++||.
T Consensus 800 V---------------------------------------V~~eVLeHL~dp~l~~~L~eI~RvLKPG~ 829 (950)
T 3htx_A 800 G---------------------------------------TCLEVIEHMEEDQACEFGEKVLSLFHPKL 829 (950)
T ss_dssp E---------------------------------------EEESCGGGSCHHHHHHHHHHHHHTTCCSE
T ss_pred E---------------------------------------EEeCchhhCChHHHHHHHHHHHHHcCCCE
Confidence 8 88899999999998899999998888764
No 143
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=96.22 E-value=0.011 Score=47.76 Aligned_cols=77 Identities=9% Similarity=0.107 Sum_probs=57.9
Q ss_pred hcCCCeEEEec------------CCC-CceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCCC------CcceE
Q 036440 25 FERLGSLVDVG------------AFP-CVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSIP------PVCMI 77 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P-~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~P------~~d~~ 77 (181)
.....+||||| ++| +.+.+.+|+ |..++.+. ..++|+++.+|..+.+| ..|++
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 45678999999 677 889999999 66666553 25699999999876433 24666
Q ss_pred eccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC
Q 036440 78 PLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA 145 (181)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g 145 (181)
++ |.+.......|+.+...++|||
T Consensus 141 ---------------------------------------~~-----d~~~~~~~~~l~~~~~~LkpGG 164 (248)
T 3tfw_A 141 ---------------------------------------FI-----DADKPNNPHYLRWALRYSRPGT 164 (248)
T ss_dssp ---------------------------------------EE-----CSCGGGHHHHHHHHHHTCCTTC
T ss_pred ---------------------------------------EE-----CCchHHHHHHHHHHHHhcCCCe
Confidence 33 3345566778999999999999
No 144
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.22 E-value=0.0057 Score=49.23 Aligned_cols=51 Identities=8% Similarity=0.070 Sum_probs=32.5
Q ss_pred CCCeEEEec----------CCCCceEEEeec-hhhhhhhccCCCceEEecCCCC-CCCC--cceE
Q 036440 27 RLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLDTNNLKYLADDFFQ-SIPP--VCMI 77 (181)
Q Consensus 27 ~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~~~ri~~~~gDff~-~~P~--~d~~ 77 (181)
...+|||+| +--+.+.+.+|. |..++.+.....-.++.+|+.+ ++|. .|++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v 118 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAV 118 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEE
Confidence 557999999 112568899998 5666665432111378888875 2333 4777
No 145
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.16 E-value=0.014 Score=44.84 Aligned_cols=99 Identities=13% Similarity=0.117 Sum_probs=67.4
Q ss_pred CCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-CCCceEEecCCCCCCCC-cceEeccccchhhhHHhhh
Q 036440 27 RLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-TNNLKYLADDFFQSIPP-VCMIPLRLGYSHIKIMIAF 92 (181)
Q Consensus 27 ~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-~~ri~~~~gDff~~~P~-~d~~~~~~~~~~~~~~~~~ 92 (181)
.-.+|+|+| ..+..+.+.+|. |..++.+.. ..+++++.+|+.+ +|. .|++
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~D~v--------------- 114 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSE-ISGKYDTW--------------- 114 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGG-CCCCEEEE---------------
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHH-CCCCeeEE---------------
Confidence 457899999 335557999998 677776653 2389999999987 454 6888
Q ss_pred hhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----ccCCHHHHHHHHHhCCCeEEEE
Q 036440 93 FIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-----KLSTEKELESLFVEVHFHHYKI 167 (181)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-----~eRt~~E~~~Ll~~aGf~~~~i 167 (181)
++.-.+|.+.+....++|+.+...+ ++ ...+.+.+.+++.++| +...+
T Consensus 115 ------------------------~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~g-~~~~~ 167 (200)
T 1ne2_A 115 ------------------------IMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIGNAKARDFLRREFSARG-DVFRE 167 (200)
T ss_dssp ------------------------EECCCC-------CHHHHHHHHHHE--EEEEEEEEGGGHHHHHHHHHHHE-EEEEE
T ss_pred ------------------------EECCCchhccCchhHHHHHHHHHhc--CcEEEEEcCchHHHHHHHHHHCC-CEEEE
Confidence 6777777777766667888887776 33 3456788899999999 65544
Q ss_pred E
Q 036440 168 T 168 (181)
Q Consensus 168 ~ 168 (181)
.
T Consensus 168 ~ 168 (200)
T 1ne2_A 168 E 168 (200)
T ss_dssp E
T ss_pred E
Confidence 3
No 146
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=96.15 E-value=0.0093 Score=51.06 Aligned_cols=81 Identities=12% Similarity=0.103 Sum_probs=55.6
Q ss_pred cCCCeEEEec-----------CCCCceEEEeechhhhhhhc-------cCCCceEEecCCCC-CCCC-cceEeccccchh
Q 036440 26 ERLGSLVDVG-----------AFPCVKCTEFDQPHVVANLL-------DTNNLKYLADDFFQ-SIPP-VCMIPLRLGYSH 85 (181)
Q Consensus 26 ~~~~~lvDvG-----------~~P~l~~~~~DlP~Vv~~a~-------~~~ri~~~~gDff~-~~P~-~d~~~~~~~~~~ 85 (181)
..-.+||||| +.+..+.+.+|....++.+. ..++++++.+|+.+ ++|. .|++
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~I-------- 120 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDII-------- 120 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEE--------
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEE--------
Confidence 3457999999 45667889999866554442 24789999999986 3454 6887
Q ss_pred hhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC
Q 036440 86 IKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA 145 (181)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g 145 (181)
+...++|.+..+...+.++.++..++|||
T Consensus 121 -------------------------------vs~~~~~~~~~~~~~~~l~~~~~~LkpgG 149 (348)
T 2y1w_A 121 -------------------------------ISEPMGYMLFNERMLESYLHAKKYLKPSG 149 (348)
T ss_dssp -------------------------------EECCCBTTBTTTSHHHHHHHGGGGEEEEE
T ss_pred -------------------------------EEeCchhcCChHHHHHHHHHHHhhcCCCe
Confidence 44445555555666666666666677766
No 147
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=96.12 E-value=0.024 Score=44.76 Aligned_cols=102 Identities=15% Similarity=0.144 Sum_probs=67.2
Q ss_pred CCeEEEec------------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCC---CCC--cceEeccccc
Q 036440 28 LGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQS---IPP--VCMIPLRLGY 83 (181)
Q Consensus 28 ~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~---~P~--~d~~~~~~~~ 83 (181)
-.++|||| .+|+.+.+.+|. |..++.+.. .++++++.+|..+- +|. .|.+
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v------ 112 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRV------ 112 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEE------
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEE------
Confidence 46899999 689999999998 556655432 35799999998751 333 3544
Q ss_pred hhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChH-------HHHHHHHHHHHHhccCCcc----CC---
Q 036440 84 SHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDE-------ESVKILKICREAITSKAKL----ST--- 149 (181)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~-------~~~~iL~~~~~a~~~~g~e----Rt--- 149 (181)
++... --|... ....+|+.++..++|||.. -.
T Consensus 113 ---------------------------------~~~~~-~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~ 158 (213)
T 2fca_A 113 ---------------------------------YLNFS-DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGL 158 (213)
T ss_dssp ---------------------------------EEESC-CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHH
T ss_pred ---------------------------------EEECC-CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 11100 012211 0257899999999999922 12
Q ss_pred HHHHHHHHHhCCCeEEEEEE
Q 036440 150 EKELESLFVEVHFHHYKITP 169 (181)
Q Consensus 150 ~~E~~~Ll~~aGf~~~~i~~ 169 (181)
.++..+.++++||....+..
T Consensus 159 ~~~~~~~~~~~g~~~~~~~~ 178 (213)
T 2fca_A 159 FEYSLKSFSEYGLLLTYVSL 178 (213)
T ss_dssp HHHHHHHHHHHTCEEEEEES
T ss_pred HHHHHHHHHHCCCccccccc
Confidence 34557788899998877653
No 148
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=96.10 E-value=0.012 Score=44.87 Aligned_cols=115 Identities=16% Similarity=0.196 Sum_probs=70.1
Q ss_pred hcCCCeEEEec------------CC-CCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCC--C-CC-cceEec
Q 036440 25 FERLGSLVDVG------------AF-PCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQS--I-PP-VCMIPL 79 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~-P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~--~-P~-~d~~~~ 79 (181)
...-.+|+|+| ++ |..+.+.+|. |..++.+.. .++++++.+|+.+- . +. .|++..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 45567999999 32 7779999998 566665542 46899999997642 2 22 577733
Q ss_pred cccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCCcc---------C--
Q 036440 80 RLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKAKL---------S-- 148 (181)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g~e---------R-- 148 (181)
+..| .+.+ -..+ ....+...++|+.+...++|+|+. .
T Consensus 100 ~~~~------------~~~~------------------~~~~--~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~ 147 (197)
T 3eey_A 100 NLGY------------LPSG------------------DHSI--STRPETTIQALSKAMELLVTGGIITVVIYYGGDTGF 147 (197)
T ss_dssp EESB------------CTTS------------------CTTC--BCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBS
T ss_pred cCCc------------ccCc------------------cccc--ccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcH
Confidence 3221 0000 0001 122345567999999999999921 0
Q ss_pred -CHHHHHHHH---HhCCCeEEEEEEcC
Q 036440 149 -TEKELESLF---VEVHFHHYKITPLF 171 (181)
Q Consensus 149 -t~~E~~~Ll---~~aGf~~~~i~~~~ 171 (181)
..+.+.+++ ...+|.+.+.....
T Consensus 148 ~~~~~~~~~~~~l~~~~~~v~~~~~~~ 174 (197)
T 3eey_A 148 EEKEKVLEFLKGVDQKKFIVQRTDFIN 174 (197)
T ss_dssp HHHHHHHHHHTTSCTTTEEEEEEEETT
T ss_pred HHHHHHHHHHHhCCCCcEEEEEEEecc
Confidence 133444444 44678888776654
No 149
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=96.04 E-value=0.0064 Score=49.66 Aligned_cols=22 Identities=14% Similarity=0.025 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHhCCCeEEEEEE
Q 036440 148 STEKELESLFVEVHFHHYKITP 169 (181)
Q Consensus 148 Rt~~E~~~Ll~~aGf~~~~i~~ 169 (181)
.+.+++.++++++||++..+..
T Consensus 162 ~~~~~l~~~l~~aGf~v~~~~~ 183 (232)
T 3opn_A 162 MTIEKVLKTATQLGFSVKGLTF 183 (232)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEEE
Confidence 3778999999999999988864
No 150
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=96.01 E-value=0.029 Score=42.29 Aligned_cols=113 Identities=12% Similarity=0.121 Sum_probs=67.7
Q ss_pred hcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCC--CCC-C-cceEecccc
Q 036440 25 FERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQ--SIP-P-VCMIPLRLG 82 (181)
Q Consensus 25 ~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~--~~P-~-~d~~~~~~~ 82 (181)
...-.+|+|+| +. ..+.+.+|+ |..++.+.. -++++++.+|+-+ ..+ . .|++..+++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~ 98 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLG 98 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCC
Confidence 45567999999 34 778999998 566665542 2789999876643 133 2 577722222
Q ss_pred chhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeecc--CChHHHHHHHHHHHHHhccCCc---------c----
Q 036440 83 YSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHV--FGDEESVKILKICREAITSKAK---------L---- 147 (181)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHd--w~D~~~~~iL~~~~~a~~~~g~---------e---- 147 (181)
| +..--|. ...+...+.|+.+...++|||+ .
T Consensus 99 ~----------------------------------~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 144 (185)
T 3mti_A 99 Y----------------------------------LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDM 144 (185)
T ss_dssp ---------------------------------------------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CH
T ss_pred C----------------------------------CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHH
Confidence 1 0000000 1336667889999999999991 1
Q ss_pred --CCHHHHHHHHHhCCCeEEEEEEcCC
Q 036440 148 --STEKELESLFVEVHFHHYKITPLFG 172 (181)
Q Consensus 148 --Rt~~E~~~Ll~~aGf~~~~i~~~~~ 172 (181)
....+|...+...+|...+......
T Consensus 145 ~~~~~~~~~~~l~~~~~~~~~~~~~~~ 171 (185)
T 3mti_A 145 EKDAVLEYVIGLDQRVFTAMLYQPLNQ 171 (185)
T ss_dssp HHHHHHHHHHHSCTTTEEEEEEEESSC
T ss_pred HHHHHHHHHHhCCCceEEEEEehhhcc
Confidence 1223344444556799888776643
No 151
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=95.97 E-value=0.048 Score=45.56 Aligned_cols=121 Identities=14% Similarity=0.131 Sum_probs=74.8
Q ss_pred CCCeEEEec-----------CCCCceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCCCC-c---ceEeccccc
Q 036440 27 RLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSIPP-V---CMIPLRLGY 83 (181)
Q Consensus 27 ~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~P~-~---d~~~~~~~~ 83 (181)
.-.+++|+| +.|+.+.+.+|+ |..++.+. ..+|++++.+|+++.++. . |++..+--|
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~IvsnPPy 202 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPY 202 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECCCC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEEcCCC
Confidence 456899999 228999999998 67766554 245799999999986543 5 887333222
Q ss_pred hhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeecc-----CChHHHHHHHHHHH-HHhccCC------ccCCHH
Q 036440 84 SHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHV-----FGDEESVKILKICR-EAITSKA------KLSTEK 151 (181)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHd-----w~D~~~~~iL~~~~-~a~~~~g------~eRt~~ 151 (181)
....- -+...+.|. +..++...+++++. ..++||| .....+
T Consensus 203 i~~~~---------------------------~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~ 255 (284)
T 1nv8_A 203 VKSSA---------------------------HLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVE 255 (284)
T ss_dssp BCGGG---------------------------SCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHH
T ss_pred CCccc---------------------------ccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHH
Confidence 10000 011223321 12233347899999 9999999 344566
Q ss_pred HHHHHHHhCCCeEEEEEEcCCCCeEEE
Q 036440 152 ELESLFVEVHFHHYKITPLFGLPSLIE 178 (181)
Q Consensus 152 E~~~Ll~~aGf~~~~i~~~~~~~~viE 178 (181)
+..+++++. .......|..-++-
T Consensus 256 ~v~~~~~~~----~~~~D~~g~~R~~~ 278 (284)
T 1nv8_A 256 ELKKIVSDT----VFLKDSAGKYRFLL 278 (284)
T ss_dssp HHTTTSTTC----EEEECTTSSEEEEE
T ss_pred HHHHHHHhC----CeecccCCCceEEE
Confidence 777777766 22335556554443
No 152
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=95.97 E-value=0.023 Score=44.24 Aligned_cols=77 Identities=9% Similarity=0.035 Sum_probs=55.9
Q ss_pred hcCCCeEEEec------------CCC-CceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCCC---------Cc
Q 036440 25 FERLGSLVDVG------------AFP-CVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSIP---------PV 74 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P-~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~P---------~~ 74 (181)
.....+|||+| ++| +.+.+.+|. |..++.+. ..++++++.+|..+.+| ..
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 44567999999 577 889999998 56555443 25789999999876432 23
Q ss_pred ceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC
Q 036440 75 CMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA 145 (181)
Q Consensus 75 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g 145 (181)
|++ + .+.+.+....+|+.+...++|||
T Consensus 142 D~v---------------------------------------~-----~~~~~~~~~~~l~~~~~~L~pgG 168 (225)
T 3tr6_A 142 DLI---------------------------------------Y-----IDADKANTDLYYEESLKLLREGG 168 (225)
T ss_dssp EEE---------------------------------------E-----ECSCGGGHHHHHHHHHHHEEEEE
T ss_pred cEE---------------------------------------E-----ECCCHHHHHHHHHHHHHhcCCCc
Confidence 554 2 33445566778999999999998
No 153
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=95.87 E-value=0.036 Score=44.62 Aligned_cols=107 Identities=9% Similarity=0.132 Sum_probs=71.8
Q ss_pred HHHHHHhhhhhcCCCeEEEec-------------CCCCceEEEeec-hhhhhhhcc---------CCCceEEecCCCCC-
Q 036440 15 SLALKYCKQIFERLGSLVDVG-------------AFPCVKCTEFDQ-PHVVANLLD---------TNNLKYLADDFFQS- 70 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG-------------~~P~l~~~~~Dl-P~Vv~~a~~---------~~ri~~~~gDff~~- 70 (181)
..+++.. +...-.+|||+| ..|..+.+.+|. |..++.+.. .++++++.+|+.+.
T Consensus 89 ~~i~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 89 AQIVHEG--DIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHHHHc--CCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 3455565 566677999999 247889999998 776665531 36899999999864
Q ss_pred CCC--cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC---
Q 036440 71 IPP--VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA--- 145 (181)
Q Consensus 71 ~P~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g--- 145 (181)
++. .|++ ++ ++.+.| ++|+++...++|+|
T Consensus 167 ~~~~~~D~v---------------------------------------~~-~~~~~~------~~l~~~~~~L~pgG~l~ 200 (280)
T 1i9g_A 167 LPDGSVDRA---------------------------------------VL-DMLAPW------EVLDAVSRLLVAGGVLM 200 (280)
T ss_dssp CCTTCEEEE---------------------------------------EE-ESSCGG------GGHHHHHHHEEEEEEEE
T ss_pred CCCCceeEE---------------------------------------EE-CCcCHH------HHHHHHHHhCCCCCEEE
Confidence 333 5776 33 222222 68999999999999
Q ss_pred -ccCCHH---HHHHHHHh-CCCeEEEEEE
Q 036440 146 -KLSTEK---ELESLFVE-VHFHHYKITP 169 (181)
Q Consensus 146 -~eRt~~---E~~~Ll~~-aGf~~~~i~~ 169 (181)
-..+.+ +....+.+ .||...+++.
T Consensus 201 ~~~~~~~~~~~~~~~l~~~~~f~~~~~~~ 229 (280)
T 1i9g_A 201 VYVATVTQLSRIVEALRAKQCWTEPRAWE 229 (280)
T ss_dssp EEESSHHHHHHHHHHHHHHSSBCCCEEEC
T ss_pred EEeCCHHHHHHHHHHHHhcCCcCCcEEEE
Confidence 233333 34444555 8898776654
No 154
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=95.84 E-value=0.039 Score=42.31 Aligned_cols=101 Identities=14% Similarity=0.078 Sum_probs=68.7
Q ss_pred CCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc----CC-CceEEecCCCCCCCC-cceEeccccchhhhH
Q 036440 27 RLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD----TN-NLKYLADDFFQSIPP-VCMIPLRLGYSHIKI 88 (181)
Q Consensus 27 ~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~----~~-ri~~~~gDff~~~P~-~d~~~~~~~~~~~~~ 88 (181)
.-.+++|+| ..+..+.+.+|. |..++.+.. .+ +++++.+|+.+ +|. .|++
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~D~v----------- 116 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-FNSRVDIV----------- 116 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-CCCCCSEE-----------
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH-cCCCCCEE-----------
Confidence 446899999 333347899998 666665542 12 79999999987 453 6888
Q ss_pred HhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------ccCCHHHHHHHHHhCC
Q 036440 89 MIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-------KLSTEKELESLFVEVH 161 (181)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-------~eRt~~E~~~Ll~~aG 161 (181)
++.-..|.+......++|+.+...+ ++ ...+.+...+++++.|
T Consensus 117 ----------------------------~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g 166 (207)
T 1wy7_A 117 ----------------------------IMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHG 166 (207)
T ss_dssp ----------------------------EECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTT
T ss_pred ----------------------------EEcCCCccccCCchHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCC
Confidence 5555556665555566777777666 33 3345667788899999
Q ss_pred CeEEEEEE
Q 036440 162 FHHYKITP 169 (181)
Q Consensus 162 f~~~~i~~ 169 (181)
|+...+.+
T Consensus 167 ~~~~~~~~ 174 (207)
T 1wy7_A 167 FVVTHRLT 174 (207)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEE
Confidence 98776653
No 155
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=95.82 E-value=0.034 Score=47.08 Aligned_cols=52 Identities=15% Similarity=0.110 Sum_probs=37.0
Q ss_pred cCCCeEEEec-----------CC-CCceEEEeec-hhhhhhhcc-----------CCCceEEecCCCCCCCC----cceE
Q 036440 26 ERLGSLVDVG-----------AF-PCVKCTEFDQ-PHVVANLLD-----------TNNLKYLADDFFQSIPP----VCMI 77 (181)
Q Consensus 26 ~~~~~lvDvG-----------~~-P~l~~~~~Dl-P~Vv~~a~~-----------~~ri~~~~gDff~~~P~----~d~~ 77 (181)
...++||||| ++ |..+.+.+|+ |.+++.++. .+|++++.+|.++.++. .|++
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 3568999999 55 5678999998 667765531 46999999999875432 5776
No 156
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=95.77 E-value=0.062 Score=44.37 Aligned_cols=96 Identities=11% Similarity=-0.018 Sum_probs=68.9
Q ss_pred hcCCCeEEEec------------CCCCceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCCCC--cceEecccc
Q 036440 25 FERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSIPP--VCMIPLRLG 82 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~P~--~d~~~~~~~ 82 (181)
.+.-.+|+|+| ..+. +.+.+|+ |..++.+. ..++++++.+|.++..+. .|++
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~V----- 196 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRI----- 196 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEE-----
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEE-----
Confidence 34467999999 3344 7889998 56665543 256799999999986543 5766
Q ss_pred chhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------------ccCC
Q 036440 83 YSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-------------KLST 149 (181)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-------------~eRt 149 (181)
++ +.+ ....++|+.+...++||| .+..
T Consensus 197 ----------------------------------i~-----~~p-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 236 (278)
T 2frn_A 197 ----------------------------------LM-----GYV-VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREP 236 (278)
T ss_dssp ----------------------------------EE-----CCC-SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTT
T ss_pred ----------------------------------EE-----CCc-hhHHHHHHHHHHHCCCCeEEEEEEeeccccccccH
Confidence 33 212 222567888888999988 2577
Q ss_pred HHHHHHHHHhCCCeEEE
Q 036440 150 EKELESLFVEVHFHHYK 166 (181)
Q Consensus 150 ~~E~~~Ll~~aGf~~~~ 166 (181)
.+++.+.++++||....
T Consensus 237 ~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 237 FETFKRITKEYGYDVEK 253 (278)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCeeEE
Confidence 89999999999998765
No 157
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=95.74 E-value=0.016 Score=50.37 Aligned_cols=101 Identities=10% Similarity=-0.031 Sum_probs=77.7
Q ss_pred CCCeEEEec------------CCCCceEEEeechh-hhhhhc-----cCCCceEEecCCCCCCCC--cceEeccccchhh
Q 036440 27 RLGSLVDVG------------AFPCVKCTEFDQPH-VVANLL-----DTNNLKYLADDFFQSIPP--VCMIPLRLGYSHI 86 (181)
Q Consensus 27 ~~~~lvDvG------------~~P~l~~~~~DlP~-Vv~~a~-----~~~ri~~~~gDff~~~P~--~d~~~~~~~~~~~ 86 (181)
...+|+|+| .+|..+.+.+|.-. .++.++ ...+.++.-.|+....|. +|++
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~Dva--------- 202 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVT--------- 202 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEE---------
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchH---------
Confidence 357999999 67999999999954 444332 255688999999977665 7999
Q ss_pred hHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----------------ccCC
Q 036440 87 KIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-----------------KLST 149 (181)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-----------------~eRt 149 (181)
++--++|...+++.-..+ ++..++.+++ -+.=
T Consensus 203 ------------------------------L~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y 251 (281)
T 3lcv_B 203 ------------------------------LLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNY 251 (281)
T ss_dssp ------------------------------EETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHHHHH
T ss_pred ------------------------------HHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHH
Confidence 777888988888888888 8999999998 1222
Q ss_pred HHHHHHHHHhCCCeEEEE
Q 036440 150 EKELESLFVEVHFHHYKI 167 (181)
Q Consensus 150 ~~E~~~Ll~~aGf~~~~i 167 (181)
.++|++++.+.|+...++
T Consensus 252 ~~~~e~~~~~~g~~~~~~ 269 (281)
T 3lcv_B 252 SQSFESQARERSCRIQRL 269 (281)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhcCCceeee
Confidence 457888888899965554
No 158
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=95.72 E-value=0.066 Score=44.49 Aligned_cols=105 Identities=14% Similarity=0.101 Sum_probs=69.3
Q ss_pred hcCCCeEEEec-------------CCCCceEEEeec-hhhhhhhc----cCCCceEEecCCCCC--CCC----cceEecc
Q 036440 25 FERLGSLVDVG-------------AFPCVKCTEFDQ-PHVVANLL----DTNNLKYLADDFFQS--IPP----VCMIPLR 80 (181)
Q Consensus 25 ~~~~~~lvDvG-------------~~P~l~~~~~Dl-P~Vv~~a~----~~~ri~~~~gDff~~--~P~----~d~~~~~ 80 (181)
++.-.+|+|+| --|.=+.+.+|. |..++.+. ..+++..+.+|.-++ .|. .|++
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvV--- 151 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGL--- 151 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEE---
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEE---
Confidence 44557999999 247778889997 55555443 356888888887642 221 3544
Q ss_pred ccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------ccC------
Q 036440 81 LGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------KLS------ 148 (181)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------~eR------ 148 (181)
++. +-| . ++....+++++..++||| +.|
T Consensus 152 ------------------------------------f~d-~~~-~--~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~ 191 (233)
T 4df3_A 152 ------------------------------------YAD-VAQ-P--EQAAIVVRNARFFLRDGGYMLMAIKARSIDVTT 191 (233)
T ss_dssp ------------------------------------EEC-CCC-T--THHHHHHHHHHHHEEEEEEEEEEEECCHHHHHT
T ss_pred ------------------------------------EEe-ccC-C--hhHHHHHHHHHHhccCCCEEEEEEecccCCCCC
Confidence 322 111 1 234568999999999999 222
Q ss_pred ----CHHHHHHHHHhCCCeEEEEEEcCC
Q 036440 149 ----TEKELESLFVEVHFHHYKITPLFG 172 (181)
Q Consensus 149 ----t~~E~~~Ll~~aGf~~~~i~~~~~ 172 (181)
..++-.+.|+++||+..+...+..
T Consensus 192 p~~~~~~~ev~~L~~~GF~l~e~i~L~p 219 (233)
T 4df3_A 192 EPSEVYKREIKTLMDGGLEIKDVVHLDP 219 (233)
T ss_dssp CCCHHHHHHHHHHHHTTCCEEEEEECTT
T ss_pred ChHHHHHHHHHHHHHCCCEEEEEEccCC
Confidence 234556778999999998877655
No 159
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=95.70 E-value=0.035 Score=46.67 Aligned_cols=135 Identities=11% Similarity=0.126 Sum_probs=59.2
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------C-CCCceEEEeec-hhhhhhhcc-----------------CCCceEE
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------A-FPCVKCTEFDQ-PHVVANLLD-----------------TNNLKYL 63 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~-~P~l~~~~~Dl-P~Vv~~a~~-----------------~~ri~~~ 63 (181)
..+++.. +...-.+|||+| . .|..+.+.+|. |..++.+.. .+++++.
T Consensus 95 ~~~l~~l--~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~ 172 (336)
T 2b25_A 95 NMILSMM--DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI 172 (336)
T ss_dssp HHHHHHH--TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred HHHHHhc--CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEE
Confidence 4455655 566667999999 3 47788999998 566554432 3689999
Q ss_pred ecCCCCC---CCC--cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHH
Q 036440 64 ADDFFQS---IPP--VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICR 138 (181)
Q Consensus 64 ~gDff~~---~P~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~ 138 (181)
.+|+.+. +|. .|++.++..-....+.-+ .--+.+|+ .+ ++-..+.++..++++...
T Consensus 173 ~~d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~-~~~LkpgG---------------~l---v~~~~~~~~~~~~~~~l~ 233 (336)
T 2b25_A 173 HKDISGATEDIKSLTFDAVALDMLNPHVTLPVF-YPHLKHGG---------------VC---AVYVVNITQVIELLDGIR 233 (336)
T ss_dssp ESCTTCCC-------EEEEEECSSSTTTTHHHH-GGGEEEEE---------------EE---EEEESSHHHHHHHHHHHH
T ss_pred ECChHHcccccCCCCeeEEEECCCCHHHHHHHH-HHhcCCCc---------------EE---EEEeCCHHHHHHHHHHHH
Confidence 9999874 333 587744433211111110 11122332 12 233455666666666554
Q ss_pred HH---------hccCCc-------cCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 139 EA---------ITSKAK-------LSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 139 ~a---------~~~~g~-------eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
+. .....+ .+...+|...|+++||+++++...
T Consensus 234 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~g~y~~~l~~aGF~~v~~~~~ 281 (336)
T 2b25_A 234 TCELALSCEKISEVIVRDWLVCLAKQKNGILAQKVESKINTDVQLDSQ 281 (336)
T ss_dssp HHTCCEEEEEEECCCCCCEEECC-------------------------
T ss_pred hcCCCcccceEEEecccceEEEeecccccchhhhhccccccccccccc
Confidence 42 111111 112238999999999999887644
No 160
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=95.69 E-value=0.023 Score=48.07 Aligned_cols=118 Identities=8% Similarity=-0.037 Sum_probs=72.9
Q ss_pred hhcCCCeEEEec------------CC-CCceEEEeec-hhhhhhhcc------CCCceEEecCCCCC--CC-CcceEecc
Q 036440 24 IFERLGSLVDVG------------AF-PCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQS--IP-PVCMIPLR 80 (181)
Q Consensus 24 d~~~~~~lvDvG------------~~-P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~--~P-~~d~~~~~ 80 (181)
+...-.+|+|+| .+ +..+.+.+|. |..++.+.. ..+++++.+|+.+. .+ ..|.++++
T Consensus 115 ~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d 194 (315)
T 1ixk_A 115 DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLD 194 (315)
T ss_dssp CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEe
Confidence 455667999999 23 4578899998 455554431 24799999998753 22 26888555
Q ss_pred ccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHH-------HHHHHHHHHHhccCC--------
Q 036440 81 LGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEES-------VKILKICREAITSKA-------- 145 (181)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~-------~~iL~~~~~a~~~~g-------- 145 (181)
.-+|+.-. .+ --..+.+.|+.++. .++|+++...++|||
T Consensus 195 ~Pcsg~g~--------------~~------------~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 195 APCTGSGT--------------IH------------KNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp CCTTSTTT--------------CC--------------------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCCCCccc--------------cc------------CChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 43221100 00 00112234555443 589999999999999
Q ss_pred --ccCCHHHHHHHHHhCCCeEEEE
Q 036440 146 --KLSTEKELESLFVEVHFHHYKI 167 (181)
Q Consensus 146 --~eRt~~E~~~Ll~~aGf~~~~i 167 (181)
.+-.++..+.++++.||+.+.+
T Consensus 249 ~~~~Ene~~v~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 249 LEPEENEFVIQWALDNFDVELLPL 272 (315)
T ss_dssp CCGGGTHHHHHHHHHHSSEEEECC
T ss_pred CChHHhHHHHHHHHhcCCCEEecC
Confidence 4455667888999999877654
No 161
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=95.65 E-value=0.045 Score=42.94 Aligned_cols=122 Identities=12% Similarity=0.209 Sum_probs=67.8
Q ss_pred HHHHhhhhhcCCCeEEEecCCCC----------ceEEEeechhhhhhhccCCCceEEecCCCCCC--------------C
Q 036440 17 ALKYCKQIFERLGSLVDVGAFPC----------VKCTEFDQPHVVANLLDTNNLKYLADDFFQSI--------------P 72 (181)
Q Consensus 17 ~l~~~~~d~~~~~~lvDvG~~P~----------l~~~~~DlP~Vv~~a~~~~ri~~~~gDff~~~--------------P 72 (181)
+.+.|. -+..-.+|||+|.-|+ .+.+.+|+-.. ...++++++.+|+.+.- .
T Consensus 16 i~~~~~-~~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~----~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (191)
T 3dou_A 16 LLDRYR-VVRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEM----EEIAGVRFIRCDIFKETIFDDIDRALREEGIE 90 (191)
T ss_dssp HHHHHC-CSCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCC----CCCTTCEEEECCTTSSSHHHHHHHHHHHHTCS
T ss_pred HHHHcC-CCCCCCEEEEEeecCCHHHHHHHHcCCcEEEEecccc----ccCCCeEEEEccccCHHHHHHHHHHhhcccCC
Confidence 344452 2456689999994444 56888888542 22468999999998631 1
Q ss_pred CcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------
Q 036440 73 PVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------- 145 (181)
Q Consensus 73 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------- 145 (181)
..|+++.+... ...+.+. .-|...-+.+..+|+.+...++|||
T Consensus 91 ~~D~Vlsd~~~---------------~~~g~~~---------------~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 91 KVDDVVSDAMA---------------KVSGIPS---------------RDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp SEEEEEECCCC---------------CCCSCHH---------------HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cceEEecCCCc---------------CCCCCcc---------------cCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 34555222100 0000000 0000011234578999999999999
Q ss_pred ccCCHHHHHHHHHhCCCeEEEEE-EcCCCC
Q 036440 146 KLSTEKELESLFVEVHFHHYKIT-PLFGLP 174 (181)
Q Consensus 146 ~eRt~~E~~~Ll~~aGf~~~~i~-~~~~~~ 174 (181)
+.....++...++ ..|..+++. |..+-.
T Consensus 141 ~~~~~~~~~~~l~-~~F~~v~~~kP~asR~ 169 (191)
T 3dou_A 141 QGDMTNDFIAIWR-KNFSSYKISKPPASRG 169 (191)
T ss_dssp CSTHHHHHHHHHG-GGEEEEEEECC-----
T ss_pred CCCCHHHHHHHHH-HhcCEEEEECCCCccC
Confidence 3334566777774 469988875 655543
No 162
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=95.65 E-value=0.11 Score=40.59 Aligned_cols=99 Identities=9% Similarity=0.120 Sum_probs=64.3
Q ss_pred hcCCCeEEEec------------CC-CCceEEEeec-hhhhhhhc-------cCCCceEEecCCCCC---CC------Cc
Q 036440 25 FERLGSLVDVG------------AF-PCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQS---IP------PV 74 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~-P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~---~P------~~ 74 (181)
.....+|||+| +. |+.+.+.+|+ |..++.+. ..++++++.+|+.+. ++ ..
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 34568999999 34 4889999998 66666553 356899999998543 33 25
Q ss_pred ceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-------cc
Q 036440 75 CMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-------KL 147 (181)
Q Consensus 75 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-------~e 147 (181)
|++ ++....|.+ ....++++.+ ..++||| ..
T Consensus 136 D~V---------------------------------------~~d~~~~~~--~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 136 DMV---------------------------------------FLDHWKDRY--LPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp SEE---------------------------------------EECSCGGGH--HHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred EEE---------------------------------------EEcCCcccc--hHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 777 454444443 2233567777 8899999 33
Q ss_pred CCHHHHHHHHHhCC-CeEE
Q 036440 148 STEKELESLFVEVH-FHHY 165 (181)
Q Consensus 148 Rt~~E~~~Ll~~aG-f~~~ 165 (181)
....++.+.+.+.. |...
T Consensus 174 ~~~~~~~~~l~~~~~~~~~ 192 (221)
T 3u81_A 174 PGTPDFLAYVRGSSSFECT 192 (221)
T ss_dssp CCCHHHHHHHHHCTTEEEE
T ss_pred cchHHHHHHHhhCCCceEE
Confidence 34466666666654 4433
No 163
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=95.52 E-value=0.025 Score=44.92 Aligned_cols=46 Identities=13% Similarity=0.131 Sum_probs=34.5
Q ss_pred hcCCCeEEEec------------CCC-CceEEEeec-hhhhhhhcc-------CCCceEEecCCCCC
Q 036440 25 FERLGSLVDVG------------AFP-CVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQS 70 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P-~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~ 70 (181)
.....+|||+| .+| ..+.+.+|. |..++.+.. .+++++..+|..+.
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 124 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALET 124 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHH
Confidence 45668999999 566 689999998 666665532 45799999998753
No 164
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=95.50 E-value=0.028 Score=47.26 Aligned_cols=87 Identities=11% Similarity=0.103 Sum_probs=59.2
Q ss_pred HHHHHHhhhhhcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc--CCCceEEecCCCC-------CCC-C
Q 036440 15 SLALKYCKQIFERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD--TNNLKYLADDFFQ-------SIP-P 73 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~--~~ri~~~~gDff~-------~~P-~ 73 (181)
..+++.. ....-.+|||+| +-.+.+.+.+|. |..++.+.. ... .+.+|+.+ ..+ .
T Consensus 35 ~~il~~l--~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~--~v~~~~~~~~~~~~~~~~~~ 110 (261)
T 3iv6_A 35 ENDIFLE--NIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADR--CVTIDLLDITAEIPKELAGH 110 (261)
T ss_dssp HHHHHTT--TCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSS--CCEEEECCTTSCCCGGGTTC
T ss_pred HHHHHhc--CCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhc--cceeeeeecccccccccCCC
Confidence 3445544 455567999999 223567899998 556665543 111 23333332 111 2
Q ss_pred cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC
Q 036440 74 VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA 145 (181)
Q Consensus 74 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g 145 (181)
.|++ +...++|.|.+++..+.|++++..+ |||
T Consensus 111 fD~V---------------------------------------v~~~~l~~~~~~~~~~~l~~l~~lL-PGG 142 (261)
T 3iv6_A 111 FDFV---------------------------------------LNDRLINRFTTEEARRACLGMLSLV-GSG 142 (261)
T ss_dssp CSEE---------------------------------------EEESCGGGSCHHHHHHHHHHHHHHH-TTS
T ss_pred ccEE---------------------------------------EEhhhhHhCCHHHHHHHHHHHHHhC-cCc
Confidence 5777 8888999999999999999999999 999
No 165
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=95.50 E-value=0.09 Score=42.45 Aligned_cols=97 Identities=11% Similarity=0.062 Sum_probs=68.3
Q ss_pred cCCCeEEEec------------C----CCCceEEEeec-hhhhhhhc-cCCCceEEecCCCCC--CC-----CcceEecc
Q 036440 26 ERLGSLVDVG------------A----FPCVKCTEFDQ-PHVVANLL-DTNNLKYLADDFFQS--IP-----PVCMIPLR 80 (181)
Q Consensus 26 ~~~~~lvDvG------------~----~P~l~~~~~Dl-P~Vv~~a~-~~~ri~~~~gDff~~--~P-----~~d~~~~~ 80 (181)
....+||||| . +|..+.+.+|+ |..++.+. ..++|+++.+|..+. +| ..|++
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I--- 156 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLI--- 156 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEE---
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEE---
Confidence 3457999999 3 68899999998 55555553 357999999999873 23 14666
Q ss_pred ccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHH-HhccCCc-----------cC
Q 036440 81 LGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICRE-AITSKAK-----------LS 148 (181)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~-a~~~~g~-----------eR 148 (181)
++... |. ...++|+.+.. .++|||+ ..
T Consensus 157 ------------------------------------~~d~~-~~----~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~ 195 (236)
T 2bm8_A 157 ------------------------------------FIDNA-HA----NTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRY 195 (236)
T ss_dssp ------------------------------------EEESS-CS----SHHHHHHHHHHHTCCTTCEEEECSCHHHHHHH
T ss_pred ------------------------------------EECCc-hH----hHHHHHHHHHHhhCCCCCEEEEEeCccccccc
Confidence 33322 42 44668888886 9999992 23
Q ss_pred CHHHHHHHHHhC--CCeEEE
Q 036440 149 TEKELESLFVEV--HFHHYK 166 (181)
Q Consensus 149 t~~E~~~Ll~~a--Gf~~~~ 166 (181)
+.+++.+++++. +|+.+.
T Consensus 196 ~~~~~~~~l~~~~~~f~~~~ 215 (236)
T 2bm8_A 196 APQLFSEYLGAFRDVLSMDM 215 (236)
T ss_dssp CHHHHHHHHHTTTTTEEEET
T ss_pred CHHHHHHHHHhCcccEEEcc
Confidence 556888999988 687653
No 166
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.45 E-value=0.088 Score=45.64 Aligned_cols=44 Identities=23% Similarity=0.282 Sum_probs=35.6
Q ss_pred cCCCeEEEec------------CCCCceEEEeechhhhhhhc---------------------------cCCCceEEecC
Q 036440 26 ERLGSLVDVG------------AFPCVKCTEFDQPHVVANLL---------------------------DTNNLKYLADD 66 (181)
Q Consensus 26 ~~~~~lvDvG------------~~P~l~~~~~DlP~Vv~~a~---------------------------~~~ri~~~~gD 66 (181)
.....||.+| .+|.++...+|+|+|++.-. .+++..+++.|
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 3568999999 46899999999999987332 13789999999
Q ss_pred CCC
Q 036440 67 FFQ 69 (181)
Q Consensus 67 ff~ 69 (181)
+.+
T Consensus 176 L~d 178 (334)
T 1rjd_A 176 LND 178 (334)
T ss_dssp TTC
T ss_pred CCC
Confidence 986
No 167
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=95.44 E-value=0.15 Score=42.13 Aligned_cols=114 Identities=14% Similarity=0.009 Sum_probs=69.3
Q ss_pred HHHHHHhh-hhhcCCCeEEEecC-------------CCCceEEEeechh-h----hhhhccCCCceEEecCCCCCC----
Q 036440 15 SLALKYCK-QIFERLGSLVDVGA-------------FPCVKCTEFDQPH-V----VANLLDTNNLKYLADDFFQSI---- 71 (181)
Q Consensus 15 ~~~l~~~~-~d~~~~~~lvDvG~-------------~P~l~~~~~DlP~-V----v~~a~~~~ri~~~~gDff~~~---- 71 (181)
..+++..+ -.+..-.+|+|+|+ -|.-+.+.+|+-+ . ++.+....++.++.+|..+..
T Consensus 63 ~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~ 142 (232)
T 3id6_C 63 GAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKS 142 (232)
T ss_dssp HHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTT
T ss_pred HHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhc
Confidence 44555441 02455579999992 3556788999843 3 233434578999999986531
Q ss_pred -C-CcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHH-HHHHHHHHhccCC---
Q 036440 72 -P-PVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVK-ILKICREAITSKA--- 145 (181)
Q Consensus 72 -P-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~-iL~~~~~a~~~~g--- 145 (181)
+ ..|++ +. |.....-.+ ++++++..++|||
T Consensus 143 ~~~~~D~I---------------------------------------~~-----d~a~~~~~~il~~~~~~~LkpGG~lv 178 (232)
T 3id6_C 143 VVENVDVL---------------------------------------YV-----DIAQPDQTDIAIYNAKFFLKVNGDML 178 (232)
T ss_dssp TCCCEEEE---------------------------------------EE-----CCCCTTHHHHHHHHHHHHEEEEEEEE
T ss_pred cccceEEE---------------------------------------Ee-----cCCChhHHHHHHHHHHHhCCCCeEEE
Confidence 1 24665 22 222222333 4456666999999
Q ss_pred ---c----------cCCHHHHHHHHHhCCCeEEEEEEcCC
Q 036440 146 ---K----------LSTEKELESLFVEVHFHHYKITPLFG 172 (181)
Q Consensus 146 ---~----------eRt~~E~~~Ll~~aGf~~~~i~~~~~ 172 (181)
+ +-.+++....|+++||+..+...+..
T Consensus 179 isik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p 218 (232)
T 3id6_C 179 LVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDP 218 (232)
T ss_dssp EEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECTT
T ss_pred EEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccCC
Confidence 1 11235566778899999999887643
No 168
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=95.44 E-value=0.0045 Score=48.92 Aligned_cols=54 Identities=17% Similarity=0.272 Sum_probs=37.9
Q ss_pred CCCeEEEec----------CCCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCCCCC--cceEecc
Q 036440 27 RLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQSIPP--VCMIPLR 80 (181)
Q Consensus 27 ~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~~P~--~d~~~~~ 80 (181)
.-.+|||+| +-.+.+.+.+|+ |..++.+.. .++++++.+|+.+..|. .|++..+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~ 151 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLS 151 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEEC
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEEC
Confidence 567999999 223478899998 566665542 26899999999864333 6888333
No 169
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=95.41 E-value=0.19 Score=39.74 Aligned_cols=102 Identities=14% Similarity=0.031 Sum_probs=65.8
Q ss_pred cCCCeEEEec------------CCCCceEEEeechh-h----hhhhccCCCceEEecCCCCC---C--CC-cceEecccc
Q 036440 26 ERLGSLVDVG------------AFPCVKCTEFDQPH-V----VANLLDTNNLKYLADDFFQS---I--PP-VCMIPLRLG 82 (181)
Q Consensus 26 ~~~~~lvDvG------------~~P~l~~~~~DlP~-V----v~~a~~~~ri~~~~gDff~~---~--P~-~d~~~~~~~ 82 (181)
..-.+|||+| ..|.-+.+.+|+-. . .+.+...+++.++.+|..+. . +. .|++
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V----- 130 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLI----- 130 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEE-----
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEE-----
Confidence 3446899999 44556889999853 2 33444456788888888753 2 22 4666
Q ss_pred chhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------------ccCCH
Q 036440 83 YSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------------KLSTE 150 (181)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------------~eRt~ 150 (181)
+.. +.+ .++...+|++++..++||| -..+.
T Consensus 131 ----------------------------------~~~-~~~---~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~ 172 (210)
T 1nt2_A 131 ----------------------------------YQD-IAQ---KNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEP 172 (210)
T ss_dssp ----------------------------------EEC-CCS---TTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCH
T ss_pred ----------------------------------EEe-ccC---hhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCH
Confidence 322 222 2334456999999999999 12234
Q ss_pred HHHH--HH--HHhCCCeEEEEEEcC
Q 036440 151 KELE--SL--FVEVHFHHYKITPLF 171 (181)
Q Consensus 151 ~E~~--~L--l~~aGf~~~~i~~~~ 171 (181)
++.. ++ ++++ |++.+.....
T Consensus 173 ~~~~~~~~~~l~~~-f~~~~~~~~~ 196 (210)
T 1nt2_A 173 EEVFKSVLKEMEGD-FKIVKHGSLM 196 (210)
T ss_dssp HHHHHHHHHHHHTT-SEEEEEEECT
T ss_pred HHHHHHHHHHHHhh-cEEeeeecCC
Confidence 5542 33 8888 9999887663
No 170
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=95.37 E-value=0.024 Score=46.04 Aligned_cols=47 Identities=13% Similarity=0.217 Sum_probs=34.9
Q ss_pred hcCCCeEEEec------------CCC-CceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCC
Q 036440 25 FERLGSLVDVG------------AFP-CVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSI 71 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P-~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~ 71 (181)
..+..+|||+| +.| +.+.+.+|. |..++.+. ..++|+++.+|..+.+
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l 125 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTL 125 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 45678999999 565 789999998 45544332 3579999999987643
No 171
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=95.33 E-value=0.034 Score=50.85 Aligned_cols=87 Identities=14% Similarity=0.108 Sum_probs=60.9
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeech-hhhhhhc--------------c-CCCceEEecC
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQP-HVVANLL--------------D-TNNLKYLADD 66 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~DlP-~Vv~~a~--------------~-~~ri~~~~gD 66 (181)
..+++.. +...-.+++|+| .++.-+++.+|+- ..++.+. . .++|+++.||
T Consensus 163 ~~il~~l--~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD 240 (438)
T 3uwp_A 163 AQMIDEI--KMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD 240 (438)
T ss_dssp HHHHHHH--CCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred HHHHHhc--CCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence 4455555 566678999999 4676679999984 4443332 1 3799999999
Q ss_pred CCCC-C----CCcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHh
Q 036440 67 FFQS-I----PPVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAI 141 (181)
Q Consensus 67 ff~~-~----P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~ 141 (181)
+++. + +.+|++ ++...+| . .+-.+.|+.+...|
T Consensus 241 ~~~lp~~d~~~~aDVV---------------------------------------f~Nn~~F--~-pdl~~aL~Ei~RvL 278 (438)
T 3uwp_A 241 FLSEEWRERIANTSVI---------------------------------------FVNNFAF--G-PEVDHQLKERFANM 278 (438)
T ss_dssp TTSHHHHHHHHTCSEE---------------------------------------EECCTTC--C-HHHHHHHHHHHTTS
T ss_pred ccCCccccccCCccEE---------------------------------------EEccccc--C-chHHHHHHHHHHcC
Confidence 9973 2 246777 6655554 2 45566678889999
Q ss_pred ccCC
Q 036440 142 TSKA 145 (181)
Q Consensus 142 ~~~g 145 (181)
+|||
T Consensus 279 KPGG 282 (438)
T 3uwp_A 279 KEGG 282 (438)
T ss_dssp CTTC
T ss_pred CCCc
Confidence 9999
No 172
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=95.25 E-value=0.018 Score=44.72 Aligned_cols=48 Identities=13% Similarity=0.086 Sum_probs=36.0
Q ss_pred hcCCCeEEEec------------CCC-CceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCCC
Q 036440 25 FERLGSLVDVG------------AFP-CVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSIP 72 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P-~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~P 72 (181)
.....++||+| ++| +.+.+.+|. |..++.+. ..++++++.+|..+.+|
T Consensus 54 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 122 (210)
T 3c3p_A 54 IKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAA 122 (210)
T ss_dssp HHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHT
T ss_pred hhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhc
Confidence 34567999999 567 789999998 66665543 25689999999976433
No 173
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=95.24 E-value=0.019 Score=47.74 Aligned_cols=102 Identities=17% Similarity=0.061 Sum_probs=66.3
Q ss_pred CCCeEEEec-----------CC-CCceEEEeec-hhhhhhhcc----------CCCceEEecCCCCCC---CC-cceEec
Q 036440 27 RLGSLVDVG-----------AF-PCVKCTEFDQ-PHVVANLLD----------TNNLKYLADDFFQSI---PP-VCMIPL 79 (181)
Q Consensus 27 ~~~~lvDvG-----------~~-P~l~~~~~Dl-P~Vv~~a~~----------~~ri~~~~gDff~~~---P~-~d~~~~ 79 (181)
..++|+|+| ++ |..+.+.+|+ |.+++.++. .+|++++.+|.++.+ +. .|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I-- 152 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI-- 152 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE--
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE--
Confidence 457999999 55 5689999998 777775531 479999999987643 22 5777
Q ss_pred cccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChH--HHHHHHHHHHHHhccCC--------ccCC
Q 036440 80 RLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDE--ESVKILKICREAITSKA--------KLST 149 (181)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~--~~~~iL~~~~~a~~~~g--------~eRt 149 (181)
++...-|....+ ...++++.++..++|+| ....
T Consensus 153 -------------------------------------i~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~ 195 (275)
T 1iy9_A 153 -------------------------------------MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFT 195 (275)
T ss_dssp -------------------------------------EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTC
T ss_pred -------------------------------------EECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccc
Confidence 222111111111 12578999999999999 1122
Q ss_pred ---HHHHHHHHHhCCCeEEEEE
Q 036440 150 ---EKELESLFVEVHFHHYKIT 168 (181)
Q Consensus 150 ---~~E~~~Ll~~aGf~~~~i~ 168 (181)
..+..+.++++ |..+.+.
T Consensus 196 ~~~~~~~~~~l~~~-F~~v~~~ 216 (275)
T 1iy9_A 196 PELITNVQRDVKEI-FPITKLY 216 (275)
T ss_dssp HHHHHHHHHHHHTT-CSEEEEE
T ss_pred HHHHHHHHHHHHHh-CCCeEEE
Confidence 34455566666 7777665
No 174
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=95.19 E-value=0.015 Score=51.08 Aligned_cols=92 Identities=14% Similarity=0.122 Sum_probs=63.3
Q ss_pred HHHHHHhhhhhc----CCCeEEEec----------CCCCceEEEeec-hhhhhhhcc-----CCCceEEecCCCCCCC--
Q 036440 15 SLALKYCKQIFE----RLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQSIP-- 72 (181)
Q Consensus 15 ~~~l~~~~~d~~----~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~~~P-- 72 (181)
..+++...+... .-.+|+|+| +--+.+.+.+|. |..++.+.. .-+++++.+|+++..+
T Consensus 217 ~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~ 296 (381)
T 3dmg_A 217 LLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEE 296 (381)
T ss_dssp HHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTT
T ss_pred HHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccC
Confidence 445555532221 346899999 112568899998 566665542 2358999999997643
Q ss_pred -CcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeecc---CChHHHHHHHHHHHHHhccCC
Q 036440 73 -PVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHV---FGDEESVKILKICREAITSKA 145 (181)
Q Consensus 73 -~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHd---w~D~~~~~iL~~~~~a~~~~g 145 (181)
..|++ ++.-.+|. ...+...++++.+...++|||
T Consensus 297 ~~fD~I---------------------------------------i~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG 334 (381)
T 3dmg_A 297 ARFDII---------------------------------------VTNPPFHVGGAVILDVAQAFVNVAAARLRPGG 334 (381)
T ss_dssp CCEEEE---------------------------------------EECCCCCTTCSSCCHHHHHHHHHHHHHEEEEE
T ss_pred CCeEEE---------------------------------------EECCchhhcccccHHHHHHHHHHHHHhcCcCc
Confidence 26888 56656665 346777899999999999999
No 175
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=95.17 E-value=0.042 Score=43.14 Aligned_cols=104 Identities=13% Similarity=0.142 Sum_probs=68.6
Q ss_pred HHHHHhhhhhcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCCC-CC--
Q 036440 16 LALKYCKQIFERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQSI-PP-- 73 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~~-P~-- 73 (181)
.+++.. +...-.+|+|+| +. ..+.+.+|. |..++.+.. .+++++..+|+.+.. +.
T Consensus 82 ~~~~~~--~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 158 (248)
T 2yvl_A 82 YIALKL--NLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGI 158 (248)
T ss_dssp HHHHHT--TCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTC
T ss_pred HHHHhc--CCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCc
Confidence 344444 455667999999 23 668999997 556555432 378999999999865 43
Q ss_pred cceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC----ccC-
Q 036440 74 VCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA----KLS- 148 (181)
Q Consensus 74 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g----~eR- 148 (181)
.|++ ++ +.+ +..++|+.+...++|+| -..
T Consensus 159 ~D~v---------------------------------------~~-----~~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 159 FHAA---------------------------------------FV-----DVR--EPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp BSEE---------------------------------------EE-----CSS--CGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred ccEE---------------------------------------EE-----CCc--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 5777 32 222 22357899999999999 223
Q ss_pred --CHHHHHHHHHhCCCeEEEEEE
Q 036440 149 --TEKELESLFVEVHFHHYKITP 169 (181)
Q Consensus 149 --t~~E~~~Ll~~aGf~~~~i~~ 169 (181)
..++..+++++. |..+++..
T Consensus 193 ~~~~~~~~~~l~~~-f~~~~~~~ 214 (248)
T 2yvl_A 193 ANQVIKLLESIENY-FGNLEVVE 214 (248)
T ss_dssp HHHHHHHHHHSTTT-EEEEEEEE
T ss_pred HHHHHHHHHHHHhh-CCcceEEE
Confidence 344555566666 87766653
No 176
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=95.11 E-value=0.018 Score=47.21 Aligned_cols=99 Identities=11% Similarity=-0.007 Sum_probs=67.6
Q ss_pred CCCeEEEec------------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCCCC------CcceEeccc
Q 036440 27 RLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQSIP------PVCMIPLRL 81 (181)
Q Consensus 27 ~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~~P------~~d~~~~~~ 81 (181)
.-.+|+||| .+|+.+.+.+|. |..++.+.. -.+++++.+|..+-.+ ..|++
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I---- 155 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARA---- 155 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEE----
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEE----
Confidence 456899999 679999999997 444444431 2359999999875321 25777
Q ss_pred cchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------ccCCHHH---
Q 036440 82 GYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------KLSTEKE--- 152 (181)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------~eRt~~E--- 152 (181)
+.+ .+.+ -..+++.+...++||| .....+|
T Consensus 156 -----------------------------------~s~-a~~~-----~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~ 194 (249)
T 3g89_A 156 -----------------------------------VAR-AVAP-----LCVLSELLLPFLEVGGAAVAMKGPRVEEELAP 194 (249)
T ss_dssp -----------------------------------EEE-SSCC-----HHHHHHHHGGGEEEEEEEEEEECSCCHHHHTT
T ss_pred -----------------------------------EEC-CcCC-----HHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHH
Confidence 332 2222 2468999999999999 2223444
Q ss_pred HHHHHHhCCCeEEEEEEc
Q 036440 153 LESLFVEVHFHHYKITPL 170 (181)
Q Consensus 153 ~~~Ll~~aGf~~~~i~~~ 170 (181)
+...+++.||+..++.+.
T Consensus 195 ~~~~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 195 LPPALERLGGRLGEVLAL 212 (249)
T ss_dssp HHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHcCCeEEEEEEe
Confidence 566678889999888754
No 177
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=95.07 E-value=0.012 Score=46.45 Aligned_cols=46 Identities=13% Similarity=0.268 Sum_probs=36.2
Q ss_pred hcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCC
Q 036440 25 FERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQS 70 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~ 70 (181)
.....+|||+| .+|+.+.+.+|. |..++.+.. .++++++.+|+.+.
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 117 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQL 117 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGS
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 44567999999 678889999998 666665542 36899999999874
No 178
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=95.07 E-value=0.073 Score=45.68 Aligned_cols=45 Identities=24% Similarity=0.323 Sum_probs=35.7
Q ss_pred cCCCeEEEec----------CCC-CceEEEeechhhhhhhc---------cCCCceEEecCCCCC
Q 036440 26 ERLGSLVDVG----------AFP-CVKCTEFDQPHVVANLL---------DTNNLKYLADDFFQS 70 (181)
Q Consensus 26 ~~~~~lvDvG----------~~P-~l~~~~~DlP~Vv~~a~---------~~~ri~~~~gDff~~ 70 (181)
.+.+.+|++| ..| +++...+|+|.|++... .+++..+++.|+.+.
T Consensus 101 ~g~~QvV~LGaGlDTra~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~ 165 (310)
T 2uyo_A 101 DGIRQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQD 165 (310)
T ss_dssp TTCCEEEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSC
T ss_pred hCCCeEEEeCCCCCchhhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhh
Confidence 3568999999 435 58999999999987442 367899999999873
No 179
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=95.04 E-value=0.051 Score=45.28 Aligned_cols=101 Identities=9% Similarity=0.071 Sum_probs=65.5
Q ss_pred CCCeEEEec-----------CC-CCceEEEeec-hhhhhhhcc----------CCCceEEecCCCCCC---CC-cceEec
Q 036440 27 RLGSLVDVG-----------AF-PCVKCTEFDQ-PHVVANLLD----------TNNLKYLADDFFQSI---PP-VCMIPL 79 (181)
Q Consensus 27 ~~~~lvDvG-----------~~-P~l~~~~~Dl-P~Vv~~a~~----------~~ri~~~~gDff~~~---P~-~d~~~~ 79 (181)
...+|+|+| ++ |..+.+.+|+ |.+++.++. .+|++++.+|..+.+ +. .|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I-- 155 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI-- 155 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE--
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE--
Confidence 457999999 44 6789999998 677775531 479999999987532 32 5877
Q ss_pred cccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHH---HHHHHHHHHHhccCC--------ccC
Q 036440 80 RLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEES---VKILKICREAITSKA--------KLS 148 (181)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~---~~iL~~~~~a~~~~g--------~eR 148 (181)
++....| +..... .+.+++++..++|+| ...
T Consensus 156 -------------------------------------i~d~~~~-~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~ 197 (283)
T 2i7c_A 156 -------------------------------------IVDSSDP-IGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWI 197 (283)
T ss_dssp -------------------------------------EEECCCT-TTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTT
T ss_pred -------------------------------------EEcCCCC-CCcchhhhHHHHHHHHHHhcCCCcEEEEECCCccc
Confidence 3322222 222222 689999999999999 122
Q ss_pred CHH---HHHHHHHhCCCeEEEEE
Q 036440 149 TEK---ELESLFVEVHFHHYKIT 168 (181)
Q Consensus 149 t~~---E~~~Ll~~aGf~~~~i~ 168 (181)
..+ ++.+.++++ |..+++.
T Consensus 198 ~~~~~~~~~~~l~~~-F~~v~~~ 219 (283)
T 2i7c_A 198 HVGTIKNMIGYAKKL-FKKVEYA 219 (283)
T ss_dssp CHHHHHHHHHHHHTT-CSEEEEE
T ss_pred CHHHHHHHHHHHHHH-CCceEEE
Confidence 333 334444444 7777654
No 180
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=94.98 E-value=0.027 Score=47.37 Aligned_cols=51 Identities=8% Similarity=0.020 Sum_probs=37.3
Q ss_pred CCCeEEEec-----------CC-CCceEEEeec-hhhhhhhcc----------CCCceEEecCCCCCCC---C-cceE
Q 036440 27 RLGSLVDVG-----------AF-PCVKCTEFDQ-PHVVANLLD----------TNNLKYLADDFFQSIP---P-VCMI 77 (181)
Q Consensus 27 ~~~~lvDvG-----------~~-P~l~~~~~Dl-P~Vv~~a~~----------~~ri~~~~gDff~~~P---~-~d~~ 77 (181)
...+|+|+| ++ |..+.+.+|+ |.+++.+.. .+|++++.+|.++.++ . .|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 167 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI 167 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEE
Confidence 457999999 44 6789999998 677665431 4799999999875332 2 5777
No 181
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=94.98 E-value=0.067 Score=41.62 Aligned_cols=47 Identities=9% Similarity=0.080 Sum_probs=35.7
Q ss_pred hhcCCCeEEEec------------CCC-CceEEEeec-hhhhhhhc-------cCCCceEEecCCCCC
Q 036440 24 IFERLGSLVDVG------------AFP-CVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQS 70 (181)
Q Consensus 24 d~~~~~~lvDvG------------~~P-~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~ 70 (181)
......+|+|+| ++| +.+.+.+|. |..++.+. ..++++++.+|+++.
T Consensus 66 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~ 133 (229)
T 2avd_A 66 RLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALET 133 (229)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred HhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHH
Confidence 345668999999 556 789999998 66666553 247999999998754
No 182
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=94.88 E-value=0.039 Score=44.19 Aligned_cols=46 Identities=20% Similarity=0.316 Sum_probs=34.4
Q ss_pred CCCeEEEec------------CCCCceEEEeec-hhhhhhhc--------------cCCCceEEecCCCCCCC
Q 036440 27 RLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLL--------------DTNNLKYLADDFFQSIP 72 (181)
Q Consensus 27 ~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~--------------~~~ri~~~~gDff~~~P 72 (181)
.-.++|||| .+|..+.+.+|. |..++.+. .-++++++.+|.++.+|
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~ 121 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLP 121 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGG
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHH
Confidence 346899999 789999999996 55555442 12589999999987554
No 183
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=94.61 E-value=0.064 Score=44.55 Aligned_cols=51 Identities=14% Similarity=0.109 Sum_probs=37.4
Q ss_pred CCCeEEEec-----------CCCCceEEEeec-hhhhhhhc----------------cCCCceEEecCCCCCC--CC-cc
Q 036440 27 RLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLL----------------DTNNLKYLADDFFQSI--PP-VC 75 (181)
Q Consensus 27 ~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~----------------~~~ri~~~~gDff~~~--P~-~d 75 (181)
...+|+|+| ++|..+.+.+|+ |.+++.++ ..+|++++.+|..+.+ +. .|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~fD 154 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGFD 154 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCCee
Confidence 457899999 558789999998 67776543 2468999999976532 22 57
Q ss_pred eE
Q 036440 76 MI 77 (181)
Q Consensus 76 ~~ 77 (181)
++
T Consensus 155 ~I 156 (281)
T 1mjf_A 155 VI 156 (281)
T ss_dssp EE
T ss_pred EE
Confidence 77
No 184
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=94.38 E-value=0.085 Score=44.67 Aligned_cols=53 Identities=15% Similarity=0.197 Sum_probs=38.4
Q ss_pred hcCCCeEEEec-----------CCCCceEEEeechhhhhhhc-------cCCCceEEecCCCCC-CCC--cceE
Q 036440 25 FERLGSLVDVG-----------AFPCVKCTEFDQPHVVANLL-------DTNNLKYLADDFFQS-IPP--VCMI 77 (181)
Q Consensus 25 ~~~~~~lvDvG-----------~~P~l~~~~~DlP~Vv~~a~-------~~~ri~~~~gDff~~-~P~--~d~~ 77 (181)
...-.+|+||| +.+..+.+.+|....++.+. ..++|+++.+|+.+- +|. .|++
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~I 109 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDII 109 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEE
T ss_pred hcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEE
Confidence 44567999999 44556889999876555443 257899999999863 552 6887
No 185
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=94.34 E-value=0.1 Score=42.29 Aligned_cols=45 Identities=16% Similarity=0.242 Sum_probs=34.0
Q ss_pred CCCeEEEec------------CCCCceEEEeec-hhhhhhhc------------cCCCceEEecCCCCCC
Q 036440 27 RLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLL------------DTNNLKYLADDFFQSI 71 (181)
Q Consensus 27 ~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~------------~~~ri~~~~gDff~~~ 71 (181)
.-.++|||| .+|+...+.+|+ |..++.+. ...+|+++.+|..+.+
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l 115 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHL 115 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCH
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhh
Confidence 345899999 789999999998 55555332 2468999999987643
No 186
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=94.31 E-value=0.096 Score=41.94 Aligned_cols=42 Identities=7% Similarity=0.127 Sum_probs=31.6
Q ss_pred eEEEec------------CCC-CceEEEeec-hhhhhhhc-------cC-CCceEEecCCCCCC
Q 036440 30 SLVDVG------------AFP-CVKCTEFDQ-PHVVANLL-------DT-NNLKYLADDFFQSI 71 (181)
Q Consensus 30 ~lvDvG------------~~P-~l~~~~~Dl-P~Vv~~a~-------~~-~ri~~~~gDff~~~ 71 (181)
++||+| ++| +.+.+.+|. |..++.+. .. +||+++.+|..+.+
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l 122 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVM 122 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHG
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHH
Confidence 899999 454 789999998 55555443 24 69999999987643
No 187
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=94.23 E-value=0.089 Score=44.89 Aligned_cols=51 Identities=10% Similarity=0.083 Sum_probs=38.0
Q ss_pred CCCeEEEec-----------CC-CCceEEEeec-hhhhhhhcc----------CCCceEEecCCCCCC---CC-cceE
Q 036440 27 RLGSLVDVG-----------AF-PCVKCTEFDQ-PHVVANLLD----------TNNLKYLADDFFQSI---PP-VCMI 77 (181)
Q Consensus 27 ~~~~lvDvG-----------~~-P~l~~~~~Dl-P~Vv~~a~~----------~~ri~~~~gDff~~~---P~-~d~~ 77 (181)
...+|+|+| ++ |..+.+.+|+ |.+++.++. .+|++++.+|.++.+ +. .|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 457999999 44 6789999998 677765531 468999999987643 22 5777
No 188
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=94.13 E-value=0.054 Score=42.88 Aligned_cols=60 Identities=17% Similarity=0.283 Sum_probs=42.2
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCCCCC--
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQSIPP-- 73 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~~P~-- 73 (181)
..+++.. +...-.+|||+| ..| .+.+.+|. |..++.+.. .+++++..+|+...+|.
T Consensus 81 ~~~~~~l--~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (235)
T 1jg1_A 81 AIMLEIA--NLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKA 157 (235)
T ss_dssp HHHHHHH--TCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred HHHHHhc--CCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCC
Confidence 3455555 456667999999 455 78999996 666665542 24699999998666654
Q ss_pred -cceE
Q 036440 74 -VCMI 77 (181)
Q Consensus 74 -~d~~ 77 (181)
.|++
T Consensus 158 ~fD~I 162 (235)
T 1jg1_A 158 PYDVI 162 (235)
T ss_dssp CEEEE
T ss_pred CccEE
Confidence 4887
No 189
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=94.03 E-value=0.089 Score=40.51 Aligned_cols=81 Identities=7% Similarity=0.014 Sum_probs=57.5
Q ss_pred HHHHHhhhhhcCCCeEEEec------------CC-CCceEEEeec-hhhhhhhcc------CCCceEEecCCCCCCC---
Q 036440 16 LALKYCKQIFERLGSLVDVG------------AF-PCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQSIP--- 72 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG------------~~-P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~~P--- 72 (181)
.+++.. ....-.+|||+| .. |..+.+.+|. |..++.+.. .+++++..+|+.+.+|
T Consensus 68 ~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 145 (215)
T 2yxe_A 68 MMCELL--DLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLA 145 (215)
T ss_dssp HHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGC
T ss_pred HHHHhh--CCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCC
Confidence 344444 445567999999 33 6688999998 566665542 2579999999977665
Q ss_pred CcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC
Q 036440 73 PVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA 145 (181)
Q Consensus 73 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g 145 (181)
..|++ +....+|...+ ++...++|||
T Consensus 146 ~fD~v---------------------------------------~~~~~~~~~~~--------~~~~~L~pgG 171 (215)
T 2yxe_A 146 PYDRI---------------------------------------YTTAAGPKIPE--------PLIRQLKDGG 171 (215)
T ss_dssp CEEEE---------------------------------------EESSBBSSCCH--------HHHHTEEEEE
T ss_pred CeeEE---------------------------------------EECCchHHHHH--------HHHHHcCCCc
Confidence 25887 77777777663 6678888988
No 190
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=93.92 E-value=0.1 Score=45.18 Aligned_cols=76 Identities=11% Similarity=0.169 Sum_probs=57.1
Q ss_pred hcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCCCCC--cceEeccccc
Q 036440 25 FERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQSIPP--VCMIPLRLGY 83 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~~P~--~d~~~~~~~~ 83 (181)
...-.+|+||| +.|+.+.+.+|+ |..++.|+. -+||+++.+|..+ +|. .|++
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~-l~d~~FDvV------ 192 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV-IDGLEFDVL------ 192 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG-GGGCCCSEE------
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh-CCCCCcCEE------
Confidence 34557999999 458899999998 677776642 2799999999986 443 5877
Q ss_pred hhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC
Q 036440 84 SHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA 145 (181)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g 145 (181)
++... -++-.++++.++..++|||
T Consensus 193 ---------------------------------~~~a~-----~~d~~~~l~el~r~LkPGG 216 (298)
T 3fpf_A 193 ---------------------------------MVAAL-----AEPKRRVFRNIHRYVDTET 216 (298)
T ss_dssp ---------------------------------EECTT-----CSCHHHHHHHHHHHCCTTC
T ss_pred ---------------------------------EECCC-----ccCHHHHHHHHHHHcCCCc
Confidence 33322 2445689999999999999
No 191
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=93.85 E-value=0.072 Score=44.05 Aligned_cols=102 Identities=13% Similarity=0.109 Sum_probs=69.2
Q ss_pred cCCCeEEEec------------CCCCceEEEeech-hhhhhhc-------cCCCceEEecCCCCCCCC--cceEeccccc
Q 036440 26 ERLGSLVDVG------------AFPCVKCTEFDQP-HVVANLL-------DTNNLKYLADDFFQSIPP--VCMIPLRLGY 83 (181)
Q Consensus 26 ~~~~~lvDvG------------~~P~l~~~~~DlP-~Vv~~a~-------~~~ri~~~~gDff~~~P~--~d~~~~~~~~ 83 (181)
....+|+|+| ..|+++.+..|.- ..++.++ ...++++ .|..+..|. .|++
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvV------ 119 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVV------ 119 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEE------
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChh------
Confidence 4568999999 7999999999995 4555443 1335666 777765544 6999
Q ss_pred hhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC----------------c-
Q 036440 84 SHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA----------------K- 146 (181)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g----------------~- 146 (181)
++-.+||-- ++.-..++ +++.+++|+| .
T Consensus 120 ---------------------------------La~k~LHlL-~~~~~al~-~v~~~L~pggvfISfptksl~Gr~~gm~ 164 (200)
T 3fzg_A 120 ---------------------------------FLLKMLPVL-KQQDVNIL-DFLQLFHTQNFVISFPIKSLSGKEKGME 164 (200)
T ss_dssp ---------------------------------EEETCHHHH-HHTTCCHH-HHHHTCEEEEEEEEEECCCCC--CTTCC
T ss_pred ---------------------------------hHhhHHHhh-hhhHHHHH-HHHHHhCCCCEEEEeChHHhcCCCcchh
Confidence 888999998 54444444 8999999998 2
Q ss_pred cCCHHHHHHHHHhCCCeEEEEEEcC
Q 036440 147 LSTEKELESLFVEVHFHHYKITPLF 171 (181)
Q Consensus 147 eRt~~E~~~Ll~~aGf~~~~i~~~~ 171 (181)
+.=.++|++.+ ...+.+++-...+
T Consensus 165 ~~Y~~~~~~~~-~~~~~~~~~~~~~ 188 (200)
T 3fzg_A 165 ENYQLWFESFT-KGWIKILDSKVIG 188 (200)
T ss_dssp CCHHHHHHHHT-TTTSCEEEEEEET
T ss_pred hhHHHHHHHhc-cCcceeeeeeeeC
Confidence 22244556666 4555555544443
No 192
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=93.84 E-value=0.12 Score=44.06 Aligned_cols=53 Identities=19% Similarity=0.298 Sum_probs=38.5
Q ss_pred hcCCCeEEEec-----------CCCCceEEEeechhhhhhhcc-------CCCceEEecCCCC-CCCC--cceE
Q 036440 25 FERLGSLVDVG-----------AFPCVKCTEFDQPHVVANLLD-------TNNLKYLADDFFQ-SIPP--VCMI 77 (181)
Q Consensus 25 ~~~~~~lvDvG-----------~~P~l~~~~~DlP~Vv~~a~~-------~~ri~~~~gDff~-~~P~--~d~~ 77 (181)
...-.+||||| +.+..+.+.+|....++.+.. .++|+++.+|+.+ ++|. .|++
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~I 135 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVI 135 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEE
Confidence 44557999999 345568899998766555432 4799999999986 3552 6887
No 193
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=93.79 E-value=0.1 Score=44.59 Aligned_cols=81 Identities=10% Similarity=0.064 Sum_probs=56.2
Q ss_pred cCCCeEEEec-----------CCCCceEEEeechhhhhhhc-------cCCCceEEecCCCC-CCCC--cceEeccccch
Q 036440 26 ERLGSLVDVG-----------AFPCVKCTEFDQPHVVANLL-------DTNNLKYLADDFFQ-SIPP--VCMIPLRLGYS 84 (181)
Q Consensus 26 ~~~~~lvDvG-----------~~P~l~~~~~DlP~Vv~~a~-------~~~ri~~~~gDff~-~~P~--~d~~~~~~~~~ 84 (181)
..-.+||||| +.+..+.+.+|..+.++.+. ..++|+++.+|+.+ ++|. .|++
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I------- 137 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDII------- 137 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEE-------
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEE-------
Confidence 3457999999 44667899999976555443 25779999999987 4663 6887
Q ss_pred hhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccC-ChHHHHHHHHHHHHHhccCC
Q 036440 85 HIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVF-GDEESVKILKICREAITSKA 145 (181)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw-~D~~~~~iL~~~~~a~~~~g 145 (181)
+...+.|.. ..+....+|+.+...++|||
T Consensus 138 --------------------------------is~~~~~~l~~~~~~~~~l~~~~r~LkpgG 167 (349)
T 3q7e_A 138 --------------------------------ISEWMGYCLFYESMLNTVLHARDKWLAPDG 167 (349)
T ss_dssp --------------------------------EECCCBBTBTBTCCHHHHHHHHHHHEEEEE
T ss_pred --------------------------------EEccccccccCchhHHHHHHHHHHhCCCCC
Confidence 333222222 22334468899999999999
No 194
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=93.78 E-value=0.27 Score=41.64 Aligned_cols=121 Identities=9% Similarity=-0.112 Sum_probs=78.1
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------CC-CCceEEEeec-hhhhhhhcc------CCCceEEecCCCCC-CC-
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------AF-PCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQS-IP- 72 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~~-P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~-~P- 72 (181)
..++... ++..-..++|+| .. |..+.+.+|. |..++.+.. -++|++..+|+.+- .|
T Consensus 193 ~~l~~~~--~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~ 270 (354)
T 3tma_A 193 QALLRLA--DARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFF 270 (354)
T ss_dssp HHHHHHT--TCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTC
T ss_pred HHHHHHh--CCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcccc
Confidence 4445555 577778999999 44 8899999998 666665542 12899999999873 22
Q ss_pred -CcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC----cc
Q 036440 73 -PVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA----KL 147 (181)
Q Consensus 73 -~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g----~e 147 (181)
..|++..+.-|. .+.--+.-..+.-.++++.+...++||| -.
T Consensus 271 ~~~D~Ii~npPyg---------------------------------~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 271 PEVDRILANPPHG---------------------------------LRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp CCCSEEEECCCSC---------------------------------C----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred CCCCEEEECCCCc---------------------------------CccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 247773332210 0000000001122578999999999999 45
Q ss_pred CCHHHHHHHHHhCCCeEEEEEEcC
Q 036440 148 STEKELESLFVEVHFHHYKITPLF 171 (181)
Q Consensus 148 Rt~~E~~~Ll~~aGf~~~~i~~~~ 171 (181)
.+.+.++.+++ .||+..+..++.
T Consensus 318 ~~~~~~~~~~~-~g~~~~~~~~l~ 340 (354)
T 3tma_A 318 LRPALLKRALP-PGFALRHARVVE 340 (354)
T ss_dssp SCHHHHHHHCC-TTEEEEEEEECC
T ss_pred CCHHHHHHHhh-cCcEEEEEEEEE
Confidence 56666777777 999998877763
No 195
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=93.66 E-value=0.12 Score=39.61 Aligned_cols=59 Identities=8% Similarity=0.058 Sum_probs=41.4
Q ss_pred HHHHHhhhhhcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCCCCC---c
Q 036440 16 LALKYCKQIFERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQSIPP---V 74 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~~P~---~ 74 (181)
.+++.. +...-.+|+|+| +. ..+.+.+|. |..++.+.. .+++++..+|..+..+. .
T Consensus 68 ~~~~~l--~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 144 (210)
T 3lbf_A 68 RMTELL--ELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPF 144 (210)
T ss_dssp HHHHHT--TCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred HHHHhc--CCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCc
Confidence 344555 456668999999 22 567899998 666665542 34799999999986543 5
Q ss_pred ceE
Q 036440 75 CMI 77 (181)
Q Consensus 75 d~~ 77 (181)
|++
T Consensus 145 D~i 147 (210)
T 3lbf_A 145 DAI 147 (210)
T ss_dssp EEE
T ss_pred cEE
Confidence 877
No 196
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=93.65 E-value=0.13 Score=38.72 Aligned_cols=37 Identities=16% Similarity=0.336 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhccCC-------ccCCHHHHHHHHHhCCCeEEEEE
Q 036440 131 VKILKICREAITSKA-------KLSTEKELESLFVEVHFHHYKIT 168 (181)
Q Consensus 131 ~~iL~~~~~a~~~~g-------~eRt~~E~~~Ll~~aGf~~~~i~ 168 (181)
.++|+.+...++||| ......++...+.+. |..+++.
T Consensus 125 ~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~-f~~v~~~ 168 (196)
T 2nyu_A 125 LTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEE-FQNVRII 168 (196)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHH-EEEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHH-hcceEEE
Confidence 478999999999999 223446777777664 7766665
No 197
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=93.63 E-value=0.056 Score=43.43 Aligned_cols=46 Identities=17% Similarity=0.244 Sum_probs=35.3
Q ss_pred hcCCCeEEEec------------CCC-CceEEEeec-hhhhhhhc-------cCCCceEEecCCCCC
Q 036440 25 FERLGSLVDVG------------AFP-CVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQS 70 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P-~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~ 70 (181)
....+++||+| +.| +.+.+.+|. |..++.+. ..++|+++.+|.++.
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~ 134 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLA 134 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 45678999999 456 789999998 66666553 356899999998764
No 198
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=93.60 E-value=0.073 Score=46.25 Aligned_cols=48 Identities=19% Similarity=0.261 Sum_probs=38.4
Q ss_pred eEEEec------------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCC---CCCC--cceE
Q 036440 30 SLVDVG------------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQ---SIPP--VCMI 77 (181)
Q Consensus 30 ~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~---~~P~--~d~~ 77 (181)
+||||| .||+.+.+.+|+ |.+++.++. .+|++++.+|.++ ..+. .|++
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 163 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVI 163 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEE
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEE
Confidence 899999 489999999999 778877652 5799999999875 3442 5887
No 199
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=93.54 E-value=0.21 Score=42.62 Aligned_cols=106 Identities=11% Similarity=0.030 Sum_probs=67.5
Q ss_pred cCCCeEEEecC----------------CC-CceEEEeechhhhhhhccCCCceE-EecCCCCC-CCC-cceEeccccchh
Q 036440 26 ERLGSLVDVGA----------------FP-CVKCTEFDQPHVVANLLDTNNLKY-LADDFFQS-IPP-VCMIPLRLGYSH 85 (181)
Q Consensus 26 ~~~~~lvDvG~----------------~P-~l~~~~~DlP~Vv~~a~~~~ri~~-~~gDff~~-~P~-~d~~~~~~~~~~ 85 (181)
..-.+|||+|. .| ..+.+.+|+-+.+ +++++ +.+|+.+. .+. .|++..+...
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~v------~~v~~~i~gD~~~~~~~~~fD~Vvsn~~~-- 133 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFV------SDADSTLIGDCATVHTANKWDLIISDMYD-- 133 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCB------CSSSEEEESCGGGCCCSSCEEEEEECCCC--
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCCC------CCCEEEEECccccCCccCcccEEEEcCCc--
Confidence 34468999996 34 5678888875441 47899 99999873 333 6887221100
Q ss_pred hhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccC-ChHHHHHHHHHHHHHhccCC-------ccCCHHHHHHHH
Q 036440 86 IKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVF-GDEESVKILKICREAITSKA-------KLSTEKELESLF 157 (181)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw-~D~~~~~iL~~~~~a~~~~g-------~eRt~~E~~~Ll 157 (181)
.+.+ .+.+.+. ..+-..++|+.++..++||| .....+++..++
T Consensus 134 ---------------------~~~g--------~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l 184 (290)
T 2xyq_A 134 ---------------------PRTK--------HVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLM 184 (290)
T ss_dssp ---------------------CC-----------CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHH
T ss_pred ---------------------cccc--------cccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHH
Confidence 0000 0000000 12334589999999999999 334456999999
Q ss_pred HhCCCeEEEEE
Q 036440 158 VEVHFHHYKIT 168 (181)
Q Consensus 158 ~~aGf~~~~i~ 168 (181)
++.||..+++.
T Consensus 185 ~~~GF~~v~~~ 195 (290)
T 2xyq_A 185 GHFSWWTAFVT 195 (290)
T ss_dssp TTEEEEEEEEE
T ss_pred HHcCCcEEEEE
Confidence 99999988776
No 200
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=93.17 E-value=0.34 Score=38.60 Aligned_cols=52 Identities=12% Similarity=0.253 Sum_probs=37.8
Q ss_pred cCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-CCCceEEecCCCC-CCCC--cceE
Q 036440 26 ERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-TNNLKYLADDFFQ-SIPP--VCMI 77 (181)
Q Consensus 26 ~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-~~ri~~~~gDff~-~~P~--~d~~ 77 (181)
..-.+|+|+| ++|+.+.+.+|. |..++.+.. .+++.+..+|+.+ +++. .|++
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v 152 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAI 152 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEE
Confidence 3457899999 568889999998 555665543 5688999999875 2332 5777
No 201
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=92.98 E-value=0.14 Score=43.72 Aligned_cols=52 Identities=15% Similarity=0.119 Sum_probs=38.1
Q ss_pred cCCCeEEEec-----------C-CCCceEEEeec-hhhhhhhcc----------CCCceEEecCCCCCC---CC-cceE
Q 036440 26 ERLGSLVDVG-----------A-FPCVKCTEFDQ-PHVVANLLD----------TNNLKYLADDFFQSI---PP-VCMI 77 (181)
Q Consensus 26 ~~~~~lvDvG-----------~-~P~l~~~~~Dl-P~Vv~~a~~----------~~ri~~~~gDff~~~---P~-~d~~ 77 (181)
....+|+||| + .|..+.+.+|+ |.+++.++. .+|++++.+|.++.+ +. .|++
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 3557999999 3 46789999998 677765531 468999999987643 22 5777
No 202
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=92.96 E-value=0.15 Score=40.62 Aligned_cols=19 Identities=16% Similarity=0.256 Sum_probs=17.1
Q ss_pred hHHHHHHHHHHHHHhccCC
Q 036440 127 DEESVKILKICREAITSKA 145 (181)
Q Consensus 127 D~~~~~iL~~~~~a~~~~g 145 (181)
.+...+++++++..++|||
T Consensus 190 ~~~~~~~l~~~~~~LkpgG 208 (250)
T 1o9g_A 190 GQPVAGLLRSLASALPAHA 208 (250)
T ss_dssp HHHHHHHHHHHHHHSCTTC
T ss_pred ccHHHHHHHHHHHhcCCCc
Confidence 4777899999999999999
No 203
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=92.87 E-value=0.19 Score=41.74 Aligned_cols=67 Identities=19% Similarity=0.298 Sum_probs=44.4
Q ss_pred HHHHHHhhhhhcCCCeEEEecCC----------CCceEEEeec-hhhhhhhcc-------CCCceEEecCCCC-CCCCcc
Q 036440 15 SLALKYCKQIFERLGSLVDVGAF----------PCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQ-SIPPVC 75 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG~~----------P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~-~~P~~d 75 (181)
..+++.. +...-.+|||+|.- -..+.+.+|+ |..++.+.. .++++++.+|+.+ ++|..|
T Consensus 18 ~~i~~~~--~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~~fD 95 (285)
T 1zq9_A 18 NSIIDKA--ALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFD 95 (285)
T ss_dssp HHHHHHT--CCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCCCCS
T ss_pred HHHHHhc--CCCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccchhhc
Confidence 5666666 56666899999911 1236788887 555554432 2589999999986 466678
Q ss_pred eEeccccc
Q 036440 76 MIPLRLGY 83 (181)
Q Consensus 76 ~~~~~~~~ 83 (181)
.+..++-|
T Consensus 96 ~vv~nlpy 103 (285)
T 1zq9_A 96 TCVANLPY 103 (285)
T ss_dssp EEEEECCG
T ss_pred EEEEecCc
Confidence 77444443
No 204
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=92.86 E-value=0.18 Score=43.56 Aligned_cols=81 Identities=10% Similarity=0.035 Sum_probs=55.7
Q ss_pred cCCCeEEEec-----------CCCCceEEEeechhhhhhhc-------cCCCceEEecCCCCC-CCC-cceEeccccchh
Q 036440 26 ERLGSLVDVG-----------AFPCVKCTEFDQPHVVANLL-------DTNNLKYLADDFFQS-IPP-VCMIPLRLGYSH 85 (181)
Q Consensus 26 ~~~~~lvDvG-----------~~P~l~~~~~DlP~Vv~~a~-------~~~ri~~~~gDff~~-~P~-~d~~~~~~~~~~ 85 (181)
..-.+||||| +....+.+.+|....++.+. ..++|+++.+|+.+- +|. .|++
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~I-------- 133 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVI-------- 133 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEE--------
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEE--------
Confidence 3447899999 33334889999876555443 257899999999863 443 6887
Q ss_pred hhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChH-HHHHHHHHHHHHhccCC
Q 036440 86 IKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDE-ESVKILKICREAITSKA 145 (181)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~-~~~~iL~~~~~a~~~~g 145 (181)
+...+.|-...+ .-..+|+.+...++|||
T Consensus 134 -------------------------------v~~~~~~~l~~e~~~~~~l~~~~~~LkpgG 163 (376)
T 3r0q_C 134 -------------------------------ISEWMGYFLLRESMFDSVISARDRWLKPTG 163 (376)
T ss_dssp -------------------------------EECCCBTTBTTTCTHHHHHHHHHHHEEEEE
T ss_pred -------------------------------EEcChhhcccchHHHHHHHHHHHhhCCCCe
Confidence 444434443333 34568999999999999
No 205
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=92.60 E-value=0.11 Score=42.17 Aligned_cols=46 Identities=13% Similarity=0.125 Sum_probs=34.9
Q ss_pred hcCCCeEEEec------------CCC-CceEEEeec-hhhhhhhc-------cCCCceEEecCCCCC
Q 036440 25 FERLGSLVDVG------------AFP-CVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQS 70 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P-~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~ 70 (181)
.....++|||| ++| +.+.+.+|. |..++.+. ..++|+++.+|..+.
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~ 143 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPV 143 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH
Confidence 44668999999 566 789999998 56665543 246899999998764
No 206
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=92.35 E-value=0.35 Score=40.95 Aligned_cols=58 Identities=12% Similarity=-0.009 Sum_probs=41.3
Q ss_pred hcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCCCC--cceEecccc
Q 036440 25 FERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSIPP--VCMIPLRLG 82 (181)
Q Consensus 25 ~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~P~--~d~~~~~~~ 82 (181)
++.-.+|+|+| +....+.+.+|+ |..++.+. ..++++...+|.++-.+. +|.+.|++.
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCC
Confidence 34567999999 345567899998 56655443 378999999999875443 687755554
No 207
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=92.21 E-value=0.68 Score=34.98 Aligned_cols=79 Identities=8% Similarity=-0.053 Sum_probs=57.2
Q ss_pred CCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCC---CC--CcceEeccccc
Q 036440 27 RLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQS---IP--PVCMIPLRLGY 83 (181)
Q Consensus 27 ~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~---~P--~~d~~~~~~~~ 83 (181)
.-.+++|+| +.+..+.+.+|+ |..++.+.. .++++++.+|+.+. .+ ..|++
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i------ 117 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLV------ 117 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEE------
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEE------
Confidence 457899999 456668999998 666665542 26899999998763 22 26877
Q ss_pred hhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHH--HhccCC
Q 036440 84 SHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICRE--AITSKA 145 (181)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~--a~~~~g 145 (181)
++.-..| +..+...++|+.+.. .++|||
T Consensus 118 ---------------------------------~~~~p~~-~~~~~~~~~l~~~~~~~~L~pgG 147 (189)
T 3p9n_A 118 ---------------------------------LADPPYN-VDSADVDAILAALGTNGWTREGT 147 (189)
T ss_dssp ---------------------------------EECCCTT-SCHHHHHHHHHHHHHSSSCCTTC
T ss_pred ---------------------------------EECCCCC-cchhhHHHHHHHHHhcCccCCCe
Confidence 4443333 345777889999988 999999
No 208
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=92.10 E-value=0.23 Score=41.94 Aligned_cols=102 Identities=11% Similarity=0.065 Sum_probs=66.2
Q ss_pred CCCeEEEec-----------CC-CCceEEEeec-hhhhhhhcc-----------CCCceEEecCCCCCC---CC-cceEe
Q 036440 27 RLGSLVDVG-----------AF-PCVKCTEFDQ-PHVVANLLD-----------TNNLKYLADDFFQSI---PP-VCMIP 78 (181)
Q Consensus 27 ~~~~lvDvG-----------~~-P~l~~~~~Dl-P~Vv~~a~~-----------~~ri~~~~gDff~~~---P~-~d~~~ 78 (181)
...+||||| ++ |..+.+.+|+ |.+++.++. .+|++++.+|..+.+ +. .|++
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I- 155 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV- 155 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE-
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE-
Confidence 557999999 44 6779999998 667665431 479999999987632 22 5877
Q ss_pred ccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccC--Ch-HH--HHHHHHHHHHHhccCC--------
Q 036440 79 LRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVF--GD-EE--SVKILKICREAITSKA-------- 145 (181)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw--~D-~~--~~~iL~~~~~a~~~~g-------- 145 (181)
++....|.. .. +. ..+.+++++..++|||
T Consensus 156 --------------------------------------i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 156 --------------------------------------IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp --------------------------------------EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred --------------------------------------EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 444333321 11 11 3688999999999999
Q ss_pred c----cCCHHHHHHHHHhCCCeEEEEE
Q 036440 146 K----LSTEKELESLFVEVHFHHYKIT 168 (181)
Q Consensus 146 ~----eRt~~E~~~Ll~~aGf~~~~i~ 168 (181)
. ....++..+.++++ |..+...
T Consensus 198 ~~~~~~~~~~~~~~~l~~~-F~~v~~~ 223 (314)
T 1uir_A 198 ILLTHHRVHPVVHRTVREA-FRYVRSY 223 (314)
T ss_dssp ECC---CHHHHHHHHHHTT-CSEEEEE
T ss_pred ccccCHHHHHHHHHHHHHH-CCceEEE
Confidence 1 12244555666666 6666543
No 209
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=92.04 E-value=0.096 Score=39.00 Aligned_cols=44 Identities=9% Similarity=-0.003 Sum_probs=34.1
Q ss_pred CCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCC
Q 036440 27 RLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQS 70 (181)
Q Consensus 27 ~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~ 70 (181)
.-.+|+|+| +.+..+.+.+|. |..++.+.. .++++++.+|+.+.
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 106 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRA 106 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHH
Confidence 457999999 556678999998 667665542 36899999999874
No 210
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=91.90 E-value=0.79 Score=38.99 Aligned_cols=120 Identities=12% Similarity=0.051 Sum_probs=66.2
Q ss_pred CCCeEEEec------------CC-CCceEEEeec-hhhhhhhccCCCceEEecCCCCCCCC--cceEeccccchhhhHHh
Q 036440 27 RLGSLVDVG------------AF-PCVKCTEFDQ-PHVVANLLDTNNLKYLADDFFQSIPP--VCMIPLRLGYSHIKIMI 90 (181)
Q Consensus 27 ~~~~lvDvG------------~~-P~l~~~~~Dl-P~Vv~~a~~~~ri~~~~gDff~~~P~--~d~~~~~~~~~~~~~~~ 90 (181)
.-.+|+|+| ++ +..+.+.+|+ |..++.+ .+++++.+|+++..+. .|++..+-=|......
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---~~~~~~~~D~~~~~~~~~fD~Ii~NPPy~~~~~~- 114 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---PWAEGILADFLLWEPGEAFDLILGNPPYGIVGEA- 114 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---TTEEEEESCGGGCCCSSCEEEEEECCCCCCBSCT-
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---CCCcEEeCChhhcCccCCCCEEEECcCccCcccc-
Confidence 346999999 33 7788999998 4555544 7899999999975443 6888443221100000
Q ss_pred hhhhhhhcCCCccch-hhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----------ccCCHHHHHHHHH
Q 036440 91 AFFIRLVVGRGRLHI-FSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-----------KLSTEKELESLFV 158 (181)
Q Consensus 91 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-----------~eRt~~E~~~Ll~ 158 (181)
+.-..|. .......+.. . ..+ +-.-+-...+++.+...++++| ...+.+++++++.
T Consensus 115 --------~~~~~~~~~~~~~~~~~~--~-~~~-~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~ 182 (421)
T 2ih2_A 115 --------SKYPIHVFKAVKDLYKKA--F-STW-KGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLA 182 (421)
T ss_dssp --------TTCSBCCCHHHHHHHHHH--C-TTC-CTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHH
T ss_pred --------cccccccCHHHHHHHHHh--h-hcc-cCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHH
Confidence 0000000 0000000000 0 000 0001123367999999999999 1235688999999
Q ss_pred hCCC
Q 036440 159 EVHF 162 (181)
Q Consensus 159 ~aGf 162 (181)
+.|+
T Consensus 183 ~~~~ 186 (421)
T 2ih2_A 183 REGK 186 (421)
T ss_dssp HHSE
T ss_pred hcCC
Confidence 9998
No 211
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=91.40 E-value=0.18 Score=36.83 Aligned_cols=49 Identities=16% Similarity=0.068 Sum_probs=34.5
Q ss_pred CCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-----CCCceEEecCCCCCCC-------CcceE
Q 036440 27 RLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQSIP-------PVCMI 77 (181)
Q Consensus 27 ~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~~~P-------~~d~~ 77 (181)
.-.+++|+| ..|. .+.+|. |..++.+.. .-+++++.+|+.+..| ..|++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i 114 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVA 114 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEE
Confidence 557999999 4444 888998 666665542 1289999999886433 35777
No 212
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=91.30 E-value=0.18 Score=40.13 Aligned_cols=45 Identities=13% Similarity=0.203 Sum_probs=33.7
Q ss_pred hcCCCeEEEec------------CCC-CceEEEeec-hhhhhhhc-------cCCCceEEecCCCC
Q 036440 25 FERLGSLVDVG------------AFP-CVKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQ 69 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P-~l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~ 69 (181)
.....++||+| ++| +.+.+.+|. |..++.+. ..++|+++.+|..+
T Consensus 70 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 135 (232)
T 3cbg_A 70 LTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALA 135 (232)
T ss_dssp HHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred hcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 34567999999 566 678999998 55555443 24689999999865
No 213
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=91.26 E-value=0.067 Score=39.95 Aligned_cols=62 Identities=11% Similarity=0.081 Sum_probs=41.7
Q ss_pred HHHHHHhhhhhcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCCCC---
Q 036440 15 SLALKYCKQIFERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQSIP--- 72 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~~P--- 72 (181)
..+++... ....-.+|+|+| +.+..+.+.+|+ |..++.+.. .++++++.+|+.+.+|
T Consensus 20 ~~~~~~l~-~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 98 (177)
T 2esr_A 20 GAIFNMIG-PYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLT 98 (177)
T ss_dssp HHHHHHHC-SCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBC
T ss_pred HHHHHHHH-hhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhc
Confidence 34444442 144567999999 446678999998 667665542 3589999999986322
Q ss_pred C-cceE
Q 036440 73 P-VCMI 77 (181)
Q Consensus 73 ~-~d~~ 77 (181)
. .|++
T Consensus 99 ~~fD~i 104 (177)
T 2esr_A 99 GRFDLV 104 (177)
T ss_dssp SCEEEE
T ss_pred CCCCEE
Confidence 2 5777
No 214
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=91.20 E-value=0.69 Score=39.42 Aligned_cols=80 Identities=8% Similarity=0.081 Sum_probs=61.0
Q ss_pred cCCCeEEEec---------CCCCceEEEeech-hhhhhhc-----cCCCceEEecCCCCCCCC--cceEeccccchhhhH
Q 036440 26 ERLGSLVDVG---------AFPCVKCTEFDQP-HVVANLL-----DTNNLKYLADDFFQSIPP--VCMIPLRLGYSHIKI 88 (181)
Q Consensus 26 ~~~~~lvDvG---------~~P~l~~~~~DlP-~Vv~~a~-----~~~ri~~~~gDff~~~P~--~d~~~~~~~~~~~~~ 88 (181)
....+|+|+| ..|..+.+..|+- ..++.+. ...+.++...|+....|+ +|++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~Dvv----------- 172 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLA----------- 172 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEE-----------
T ss_pred CCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchH-----------
Confidence 4568999999 2389999999994 4555443 257889999999976544 7998
Q ss_pred HhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC
Q 036440 89 MIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA 145 (181)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g 145 (181)
++--++|...+++....+ ++..++.+++
T Consensus 173 ----------------------------Lllk~lh~LE~q~~~~~~-~ll~aL~~~~ 200 (253)
T 3frh_A 173 ----------------------------LIFKLLPLLEREQAGSAM-ALLQSLNTPR 200 (253)
T ss_dssp ----------------------------EEESCHHHHHHHSTTHHH-HHHHHCBCSE
T ss_pred ----------------------------HHHHHHHHhhhhchhhHH-HHHHHhcCCC
Confidence 777778887777777777 7777999887
No 215
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=91.15 E-value=0.15 Score=40.66 Aligned_cols=44 Identities=16% Similarity=0.203 Sum_probs=33.3
Q ss_pred CCCeEEEec------------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCC
Q 036440 27 RLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQS 70 (181)
Q Consensus 27 ~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~ 70 (181)
.-.++|||| ++|+.+.+.+|. |..++.+.. ..+++++.+|..+.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~ 96 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEV 96 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHH
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHH
Confidence 347899999 789999999998 555554431 35799999997653
No 216
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=91.14 E-value=0.54 Score=41.64 Aligned_cols=118 Identities=14% Similarity=0.090 Sum_probs=71.1
Q ss_pred hhcCCCeEEEec------------CCCC-ceEEEeech-hhhhhhcc------CCCceEEecCCCCC---CC-C-cceEe
Q 036440 24 IFERLGSLVDVG------------AFPC-VKCTEFDQP-HVVANLLD------TNNLKYLADDFFQS---IP-P-VCMIP 78 (181)
Q Consensus 24 d~~~~~~lvDvG------------~~P~-l~~~~~DlP-~Vv~~a~~------~~ri~~~~gDff~~---~P-~-~d~~~ 78 (181)
+...-.+|+|+| ..|+ .+.+.+|.- ..++.+.. ..+++++.+|+.+. ++ . .|.++
T Consensus 256 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl 335 (450)
T 2yxl_A 256 DPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVL 335 (450)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEE
Confidence 455557999999 3454 688999984 44443321 34799999998753 33 2 58886
Q ss_pred ccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHH-------HHHHHHHHHHhccCC------
Q 036440 79 LRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEES-------VKILKICREAITSKA------ 145 (181)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~-------~~iL~~~~~a~~~~g------ 145 (181)
++.-+|+.-.. |. -.+.. +.|+.++. .++|+++...++|||
T Consensus 336 ~D~Pcsg~g~~-----~~------~pd~~---------------~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t 389 (450)
T 2yxl_A 336 LDAPCTSSGTI-----GK------NPELR---------------WRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT 389 (450)
T ss_dssp EECCCCCGGGT-----TT------STTHH---------------HHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EcCCCCCCeee-----cc------Chhhh---------------hhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 55433221100 00 00001 12233322 578999999999999
Q ss_pred ----ccCCHHHHHHHHHhC-CCeEEEE
Q 036440 146 ----KLSTEKELESLFVEV-HFHHYKI 167 (181)
Q Consensus 146 ----~eRt~~E~~~Ll~~a-Gf~~~~i 167 (181)
.+-.++....++++. ||+.+.+
T Consensus 390 cs~~~~ene~~v~~~l~~~~~~~~~~~ 416 (450)
T 2yxl_A 390 CSIFKEENEKNIRWFLNVHPEFKLVPL 416 (450)
T ss_dssp SCCCGGGTHHHHHHHHHHCSSCEECCC
T ss_pred CCCChhhHHHHHHHHHHhCCCCEEeec
Confidence 344566788888886 7887654
No 217
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=91.07 E-value=0.51 Score=36.57 Aligned_cols=60 Identities=12% Similarity=0.051 Sum_probs=39.6
Q ss_pred HHHHHhhhhhcCCCeEEEecCCC----------CceEEEeec-hhhhhhhcc----CCCceEEecCCCCCCCC---cceE
Q 036440 16 LALKYCKQIFERLGSLVDVGAFP----------CVKCTEFDQ-PHVVANLLD----TNNLKYLADDFFQSIPP---VCMI 77 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG~~P----------~l~~~~~Dl-P~Vv~~a~~----~~ri~~~~gDff~~~P~---~d~~ 77 (181)
.+++.. ....-.+|+|+|.-+ ..+.+.+|. |..++.+.. .++++++.+|+.+.+|. .|++
T Consensus 61 ~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 138 (231)
T 1vbf_A 61 FMLDEL--DLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRV 138 (231)
T ss_dssp HHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEE
T ss_pred HHHHhc--CCCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEE
Confidence 444555 455667999999111 157888887 566665542 22899999999875542 5777
No 218
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=90.80 E-value=0.77 Score=41.36 Aligned_cols=86 Identities=13% Similarity=0.191 Sum_probs=57.2
Q ss_pred HHHHHhhhhhcCCCeEEEec------------CCCCceEEEeechh-hhhhh-------c-------c-CCCceEEecCC
Q 036440 16 LALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQPH-VVANL-------L-------D-TNNLKYLADDF 67 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~DlP~-Vv~~a-------~-------~-~~ri~~~~gDf 67 (181)
.+++.. +...-.+|||+| .+|..+++.+|+-. .++.+ . . .++++++.+|-
T Consensus 233 ~ml~~l--~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~ 310 (433)
T 1u2z_A 233 DVYQQC--QLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKS 310 (433)
T ss_dssp HHHHHT--TCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSC
T ss_pred HHHHhc--CCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCc
Confidence 344554 455667999999 46878899999854 34433 2 1 26899988754
Q ss_pred C-CC--C----CCcceEeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHH
Q 036440 68 F-QS--I----PPVCMIPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREA 140 (181)
Q Consensus 68 f-~~--~----P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a 140 (181)
+ +. + ...|++ ++...++ . ++..+.|+.+...
T Consensus 311 ~~~~~~~~~~~~~FDvI---------------------------------------vvn~~l~--~-~d~~~~L~el~r~ 348 (433)
T 1u2z_A 311 FVDNNRVAELIPQCDVI---------------------------------------LVNNFLF--D-EDLNKKVEKILQT 348 (433)
T ss_dssp STTCHHHHHHGGGCSEE---------------------------------------EECCTTC--C-HHHHHHHHHHHTT
T ss_pred cccccccccccCCCCEE---------------------------------------EEeCccc--c-ccHHHHHHHHHHh
Confidence 4 32 1 236777 5555553 2 4555678999999
Q ss_pred hccCC
Q 036440 141 ITSKA 145 (181)
Q Consensus 141 ~~~~g 145 (181)
++|||
T Consensus 349 LKpGG 353 (433)
T 1u2z_A 349 AKVGC 353 (433)
T ss_dssp CCTTC
T ss_pred CCCCe
Confidence 99999
No 219
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=90.47 E-value=0.44 Score=39.77 Aligned_cols=60 Identities=10% Similarity=0.195 Sum_probs=40.7
Q ss_pred HHHHHhhhhhcCCCeEEEec------------CCC-CceEEEeec-hhhhhhhcc------CCCceEEecCCCCCCCC--
Q 036440 16 LALKYCKQIFERLGSLVDVG------------AFP-CVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQSIPP-- 73 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG------------~~P-~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~~P~-- 73 (181)
.+++.. +...-.+|+|+| ..+ ..+.+.+|+ |..++.+.. .+++++..+|+.+..|.
T Consensus 66 ~l~~~l--~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~ 143 (317)
T 1dl5_A 66 LFMEWV--GLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFS 143 (317)
T ss_dssp HHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred HHHHhc--CCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCC
Confidence 444444 455667999999 445 467888997 566655532 24699999999875442
Q ss_pred -cceE
Q 036440 74 -VCMI 77 (181)
Q Consensus 74 -~d~~ 77 (181)
.|++
T Consensus 144 ~fD~I 148 (317)
T 1dl5_A 144 PYDVI 148 (317)
T ss_dssp CEEEE
T ss_pred CeEEE
Confidence 5887
No 220
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=90.30 E-value=0.18 Score=42.59 Aligned_cols=52 Identities=12% Similarity=0.112 Sum_probs=38.0
Q ss_pred cCCCeEEEec------------CCCCceEEEeec-hhhhhhhc----------cCCCceEEecCCCCCC---CC-cceE
Q 036440 26 ERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLL----------DTNNLKYLADDFFQSI---PP-VCMI 77 (181)
Q Consensus 26 ~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~----------~~~ri~~~~gDff~~~---P~-~d~~ 77 (181)
....+|||+| .+|..+.+.+|+ |.+++.++ ..+|++++.+|.++.+ +. .|++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 3557999999 346789999998 66766553 1579999999987532 22 5777
No 221
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=89.91 E-value=0.6 Score=40.91 Aligned_cols=116 Identities=10% Similarity=0.062 Sum_probs=69.4
Q ss_pred hhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-----CCCceEEecCCCCC---CC--CcceEecc
Q 036440 24 IFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQS---IP--PVCMIPLR 80 (181)
Q Consensus 24 d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~~---~P--~~d~~~~~ 80 (181)
+...-.+|+|+| ..|..+.+.+|. |..++.+.. .-+++++.+|+.+. ++ ..|.++++
T Consensus 243 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D 322 (429)
T 1sqg_A 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLD 322 (429)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEE
T ss_pred CCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEe
Confidence 344557999999 456678899998 444443321 33588999998763 23 26888665
Q ss_pred ccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHH-------HHHHHHHHHHhccCC--------
Q 036440 81 LGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEES-------VKILKICREAITSKA-------- 145 (181)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~-------~~iL~~~~~a~~~~g-------- 145 (181)
.-+|+.-..- . -.+..| .|+.++. .++|+++...++|||
T Consensus 323 ~Pcsg~g~~~-----~------~p~~~~---------------~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 323 APCSATGVIR-----R------HPDIKW---------------LRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp CCCCCGGGTT-----T------CTTHHH---------------HCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred CCCCcccccC-----C------Ccchhh---------------cCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 5443221100 0 000011 1222322 488999999999999
Q ss_pred --ccCCHHHHHHHHHhC-CCeEE
Q 036440 146 --KLSTEKELESLFVEV-HFHHY 165 (181)
Q Consensus 146 --~eRt~~E~~~Ll~~a-Gf~~~ 165 (181)
.+-.++.....+++. +|+.+
T Consensus 377 ~~~~ene~~v~~~l~~~~~~~~~ 399 (429)
T 1sqg_A 377 VLPEENSLQIKAFLQRTADAELC 399 (429)
T ss_dssp CCGGGTHHHHHHHHHHCTTCEEC
T ss_pred CChhhHHHHHHHHHHhCCCCEEe
Confidence 444566777888775 57653
No 222
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=89.84 E-value=1.9 Score=37.12 Aligned_cols=114 Identities=13% Similarity=0.053 Sum_probs=71.7
Q ss_pred hcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCC-CCC--cceEeccc
Q 036440 25 FERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQS-IPP--VCMIPLRL 81 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~-~P~--~d~~~~~~ 81 (181)
+..-.+|+|+| ..+..+.+.+|+ |..++.+.. .++|++..+|+.+. .|. .|++..+.
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 45667999999 556557888998 566665542 46899999999873 332 57773332
Q ss_pred cchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC--ccCCHHHHHHHHHh
Q 036440 82 GYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA--KLSTEKELESLFVE 159 (181)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g--~eRt~~E~~~Ll~~ 159 (181)
-|. .+.--+....+--.++++.+...++.++ -.-+.+++++.+.+
T Consensus 295 Pyg---------------------------------~r~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~~~~~~~~~~~~~ 341 (373)
T 3tm4_A 295 PYG---------------------------------LKIGKKSMIPDLYMKFFNELAKVLEKRGVFITTEKKAIEEAIAE 341 (373)
T ss_dssp CCC---------------------------------------CCHHHHHHHHHHHHHHHEEEEEEEEESCHHHHHHHHHH
T ss_pred CCC---------------------------------cccCcchhHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHH
Confidence 210 0000000011112567788888772222 56678899999999
Q ss_pred CCCeEEEEEEcC
Q 036440 160 VHFHHYKITPLF 171 (181)
Q Consensus 160 aGf~~~~i~~~~ 171 (181)
.||+..+..++.
T Consensus 342 ~G~~~~~~~~~~ 353 (373)
T 3tm4_A 342 NGFEIIHHRVIG 353 (373)
T ss_dssp TTEEEEEEEEEE
T ss_pred cCCEEEEEEEEE
Confidence 999998877663
No 223
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=89.82 E-value=2 Score=37.68 Aligned_cols=47 Identities=9% Similarity=0.201 Sum_probs=33.9
Q ss_pred hcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCCCC
Q 036440 25 FERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQSIP 72 (181)
Q Consensus 25 ~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~~P 72 (181)
...-.+++|+| +. ..+.+.+|. |..++.+.. -++++++.+|+++.++
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~ 348 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVT 348 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCS
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhh
Confidence 34557899999 33 568899998 566665542 2489999999987543
No 224
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=89.70 E-value=3 Score=38.73 Aligned_cols=25 Identities=16% Similarity=0.188 Sum_probs=20.4
Q ss_pred ccCCHHHHHHHHHhCCCeEEEEEEc
Q 036440 146 KLSTEKELESLFVEVHFHHYKITPL 170 (181)
Q Consensus 146 ~eRt~~E~~~Ll~~aGf~~~~i~~~ 170 (181)
...|.++..+.|.+.||+.+....+
T Consensus 285 ~~~~~~~~~~~~~~~Gw~~v~~~~~ 309 (695)
T 2zwa_A 285 KYNTIESQVQRFNKLGFAYVNVGDM 309 (695)
T ss_dssp TCCSHHHHHHHHHHTTCCEEEEEEH
T ss_pred cCCCHHHHHHHHHHCCCCCcceeeH
Confidence 4557999999999999998776643
No 225
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=89.41 E-value=0.84 Score=37.31 Aligned_cols=114 Identities=11% Similarity=0.004 Sum_probs=68.7
Q ss_pred hhcCCCeEEEec------------CCCC-ceEEEeech-hhhhhhcc------CCCceEEecCCCCCC------C-Ccce
Q 036440 24 IFERLGSLVDVG------------AFPC-VKCTEFDQP-HVVANLLD------TNNLKYLADDFFQSI------P-PVCM 76 (181)
Q Consensus 24 d~~~~~~lvDvG------------~~P~-l~~~~~DlP-~Vv~~a~~------~~ri~~~~gDff~~~------P-~~d~ 76 (181)
+...-.+|+|+| ..++ .+.+.+|.- ..++.+.. ..+++++.+|+.+.. + ..|.
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~ 159 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDK 159 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCE
Confidence 445567999999 3455 788999984 44544321 248999999987531 2 3688
Q ss_pred EeccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHH-------HHHHHHHHHHHhccCC----
Q 036440 77 IPLRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEE-------SVKILKICREAITSKA---- 145 (181)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~-------~~~iL~~~~~a~~~~g---- 145 (181)
++++.-+|+.-. +++- -.|+.++ -.++|+++...++|||
T Consensus 160 Vl~d~Pcs~~g~-----------------------------~~~~-p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 209 (274)
T 3ajd_A 160 ILLDAPCSGNII-----------------------------KDKN-RNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVY 209 (274)
T ss_dssp EEEEECCC------------------------------------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEcCCCCCCcc-----------------------------cccC-CCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 855544332110 0000 0233332 3689999999999999
Q ss_pred ------ccCCHHHHHHHHHh-CCCeEEEE
Q 036440 146 ------KLSTEKELESLFVE-VHFHHYKI 167 (181)
Q Consensus 146 ------~eRt~~E~~~Ll~~-aGf~~~~i 167 (181)
.+-+++..+.++++ .+|+.+.+
T Consensus 210 stcs~~~~ene~~v~~~l~~~~~~~~~~~ 238 (274)
T 3ajd_A 210 STCSMEVEENEEVIKYILQKRNDVELIII 238 (274)
T ss_dssp EESCCCTTSSHHHHHHHHHHCSSEEEECC
T ss_pred EECCCChHHhHHHHHHHHHhCCCcEEecC
Confidence 45567778888866 45766543
No 226
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=89.38 E-value=0.54 Score=40.44 Aligned_cols=52 Identities=8% Similarity=-0.026 Sum_probs=38.1
Q ss_pred cCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc----------CCCceEEecCCCCC---CCC--cceE
Q 036440 26 ERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD----------TNNLKYLADDFFQS---IPP--VCMI 77 (181)
Q Consensus 26 ~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~----------~~ri~~~~gDff~~---~P~--~d~~ 77 (181)
....+||||| ..|..+.+.+|+ |.+++.++. .+|++++.+|.++. .+. .|++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 3557999999 346789999998 667765531 46999999998753 332 5877
No 227
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=88.97 E-value=1 Score=36.90 Aligned_cols=52 Identities=13% Similarity=-0.010 Sum_probs=38.6
Q ss_pred hcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCCCCC---cceE
Q 036440 25 FERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQSIPP---VCMI 77 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~~P~---~d~~ 77 (181)
+..-.+|+|+| +.|..+.+.+|+ |..++.+.. -++++++.+|.++. |. .|++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~~~~~D~V 190 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-ELKDVADRV 190 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CCTTCEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-CccCCceEE
Confidence 55567999999 457778999998 777765542 24789999999876 43 5766
No 228
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=88.87 E-value=3 Score=36.81 Aligned_cols=23 Identities=9% Similarity=0.104 Sum_probs=19.9
Q ss_pred ccCCHHHHHHHHH-hCCCeEEEEE
Q 036440 146 KLSTEKELESLFV-EVHFHHYKIT 168 (181)
Q Consensus 146 ~eRt~~E~~~Ll~-~aGf~~~~i~ 168 (181)
.-+|.+|++.+++ +.||++.++.
T Consensus 273 y~ps~~E~~~~l~~~~~F~I~~le 296 (374)
T 3b5i_A 273 YAPSLQDFKEVVDANGSFAIDKLV 296 (374)
T ss_dssp CCCCHHHHHHHHHHHCSEEEEEEE
T ss_pred cCCCHHHHHHHHHhcCCcEEEEEE
Confidence 5699999999998 5999998765
No 229
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=88.32 E-value=1.6 Score=37.32 Aligned_cols=108 Identities=17% Similarity=0.143 Sum_probs=66.4
Q ss_pred CCCeEEEec----------CCCCceEEEeec-hhhhhhhc-------cCC-CceEEecCCCCCCC-------CcceEecc
Q 036440 27 RLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLL-------DTN-NLKYLADDFFQSIP-------PVCMIPLR 80 (181)
Q Consensus 27 ~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~-------~~~-ri~~~~gDff~~~P-------~~d~~~~~ 80 (181)
.-.+|||+| +-.+.+.+.+|+ |..++.+. ..+ +++++.+|.++.++ ..|++.++
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTD 232 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred CCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEEC
Confidence 446899999 222348899998 56665443 233 59999999987432 35777332
Q ss_pred ccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC---------ccCCHH
Q 036440 81 LGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA---------KLSTEK 151 (181)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g---------~eRt~~ 151 (181)
.-+. +.+ + -..+. ++ .+.-.++|+.+...++|+| ...+.+
T Consensus 233 PP~~--------------~~~-----------~----~~~~~-~~-~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~ 281 (332)
T 2igt_A 233 PPKF--------------GRG-----------T----HGEVW-QL-FDHLPLMLDICREILSPKALGLVLTAYSIRASFY 281 (332)
T ss_dssp CCSE--------------EEC-----------T----TCCEE-EH-HHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHH
T ss_pred Cccc--------------cCC-----------c----hHHHH-HH-HHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHH
Confidence 2100 000 0 00011 11 2344689999999999999 234677
Q ss_pred HHHHHHH----hCCCeEE
Q 036440 152 ELESLFV----EVHFHHY 165 (181)
Q Consensus 152 E~~~Ll~----~aGf~~~ 165 (181)
++.++++ ++|+++.
T Consensus 282 ~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 282 SMHELMRETMRGAGGVVA 299 (332)
T ss_dssp HHHHHHHHHTTTSCSEEE
T ss_pred HHHHHHHHHHHHcCCeEE
Confidence 8888887 6788764
No 230
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=87.72 E-value=1 Score=37.26 Aligned_cols=50 Identities=10% Similarity=0.136 Sum_probs=37.4
Q ss_pred CCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc----------CCCceEEecCCCCCCCCcceE
Q 036440 27 RLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD----------TNNLKYLADDFFQSIPPVCMI 77 (181)
Q Consensus 27 ~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~----------~~ri~~~~gDff~~~P~~d~~ 77 (181)
..++|+||| ++| .+.+.+|+ |.+++.++. .+|++++.+|.++-+-..|++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~I 143 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLI 143 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEE
Confidence 457899999 566 88999998 677776642 468999999988754225776
No 231
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=87.47 E-value=1.5 Score=33.76 Aligned_cols=47 Identities=17% Similarity=0.259 Sum_probs=34.4
Q ss_pred hcCCCeEEEec------------C-C----CCceEEEeec-hhhhhhhcc-----------CCCceEEecCCCCCC
Q 036440 25 FERLGSLVDVG------------A-F----PCVKCTEFDQ-PHVVANLLD-----------TNNLKYLADDFFQSI 71 (181)
Q Consensus 25 ~~~~~~lvDvG------------~-~----P~l~~~~~Dl-P~Vv~~a~~-----------~~ri~~~~gDff~~~ 71 (181)
...-.+|+|+| . . |..+.+.+|. |..++.+.. .++++++.+|..+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 153 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVN 153 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcc
Confidence 44557999999 2 2 6789999998 555555432 368999999998754
No 232
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=85.41 E-value=1.7 Score=36.71 Aligned_cols=55 Identities=18% Similarity=0.158 Sum_probs=33.8
Q ss_pred hcCCCeEEEecCCCC---------ceEEEeec-----hhhhhhhc--c--CCCceEEec-CCCCCCC-CcceEec
Q 036440 25 FERLGSLVDVGAFPC---------VKCTEFDQ-----PHVVANLL--D--TNNLKYLAD-DFFQSIP-PVCMIPL 79 (181)
Q Consensus 25 ~~~~~~lvDvG~~P~---------l~~~~~Dl-----P~Vv~~a~--~--~~ri~~~~g-Dff~~~P-~~d~~~~ 79 (181)
+..-.+|||+|.-|+ -+.+.+|. +..++... . .++++++.+ |+++.-+ ..|++..
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~s 154 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLC 154 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEE
Confidence 444579999993333 35778888 53332221 1 267999999 9886322 3688833
No 233
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=85.15 E-value=0.31 Score=40.61 Aligned_cols=49 Identities=10% Similarity=-0.004 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhccCCccCC---HHHHHHHHHhCCCeEEEEEEcCCCCeEEEE
Q 036440 131 VKILKICREAITSKAKLST---EKELESLFVEVHFHHYKITPLFGLPSLIEV 179 (181)
Q Consensus 131 ~~iL~~~~~a~~~~g~eRt---~~E~~~Ll~~aGf~~~~i~~~~~~~~viE~ 179 (181)
..+|+.++..++|||...| ...+++.|.+|||++.++...++....+.+
T Consensus 193 ~~~l~~l~~~L~pGG~l~tysaa~~vrr~L~~aGF~v~~~~g~~~kr~m~~a 244 (257)
T 2qy6_A 193 QNLFNAMARLARPGGTLATFTSAGFVRRGLQEAGFTMQKRKGFGRKREMLCG 244 (257)
T ss_dssp HHHHHHHHHHEEEEEEEEESCCBHHHHHHHHHHTEEEEEECCSTTCCCEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHCCCEEEeCCCCCCCCceEEE
Confidence 4689999999999996666 678999999999998776544445444443
No 234
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=84.31 E-value=1.1 Score=38.23 Aligned_cols=69 Identities=14% Similarity=0.186 Sum_probs=50.2
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------CCCCceEEEeec-hhhhhhhcc-----CCCceEEecCCCCC---C--
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------AFPCVKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQS---I-- 71 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~~P~l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~~---~-- 71 (181)
..+++.. +...-.++||+| ++|+.+.+.+|+ |..++.+.. .+|++++.+||.+- +
T Consensus 16 ~e~l~~L--~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~ 93 (301)
T 1m6y_A 16 REVIEFL--KPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKT 93 (301)
T ss_dssp HHHHHHH--CCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHH
T ss_pred HHHHHhc--CCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHh
Confidence 4556665 455667999999 678889999998 566665532 26999999997541 1
Q ss_pred ---CCcceEeccccchh
Q 036440 72 ---PPVCMIPLRLGYSH 85 (181)
Q Consensus 72 ---P~~d~~~~~~~~~~ 85 (181)
...|.+++++++|.
T Consensus 94 ~g~~~~D~Vl~D~gvSs 110 (301)
T 1m6y_A 94 LGIEKVDGILMDLGVST 110 (301)
T ss_dssp TTCSCEEEEEEECSCCH
T ss_pred cCCCCCCEEEEcCccch
Confidence 24688888998763
No 235
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=83.90 E-value=2.9 Score=35.86 Aligned_cols=52 Identities=19% Similarity=0.159 Sum_probs=37.8
Q ss_pred cCCCeEEEec-----------CCCCc-eEEEeec-hhhhhhhc-----------cCCCceEEecCCCCCCC---C-cceE
Q 036440 26 ERLGSLVDVG-----------AFPCV-KCTEFDQ-PHVVANLL-----------DTNNLKYLADDFFQSIP---P-VCMI 77 (181)
Q Consensus 26 ~~~~~lvDvG-----------~~P~l-~~~~~Dl-P~Vv~~a~-----------~~~ri~~~~gDff~~~P---~-~d~~ 77 (181)
...++|+=|| +||.+ +.+++|+ |.|++.++ ..+|++.+.+|-++-+- . .|+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 3567888888 88765 6888888 67777553 26899999999886432 2 4777
No 236
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=83.52 E-value=1 Score=35.07 Aligned_cols=53 Identities=17% Similarity=0.241 Sum_probs=36.8
Q ss_pred hcCCCeEEEec------------CCC------CceEEEeec-hhhhhhhcc-----------CCCceEEecCCCCCCCC-
Q 036440 25 FERLGSLVDVG------------AFP------CVKCTEFDQ-PHVVANLLD-----------TNNLKYLADDFFQSIPP- 73 (181)
Q Consensus 25 ~~~~~~lvDvG------------~~P------~l~~~~~Dl-P~Vv~~a~~-----------~~ri~~~~gDff~~~P~- 73 (181)
...-.+|+|+| ..+ ..+.+.+|. |..++.+.. .+++++..+|..+.+|.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPN 161 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcC
Confidence 34456999999 233 357899997 555554432 36899999999886654
Q ss_pred --cceE
Q 036440 74 --VCMI 77 (181)
Q Consensus 74 --~d~~ 77 (181)
.|++
T Consensus 162 ~~fD~I 167 (227)
T 1r18_A 162 APYNAI 167 (227)
T ss_dssp CSEEEE
T ss_pred CCccEE
Confidence 5777
No 237
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=83.46 E-value=5.2 Score=33.26 Aligned_cols=68 Identities=13% Similarity=0.219 Sum_probs=41.4
Q ss_pred HHHHHHhhhhhcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCC-CCCcce
Q 036440 15 SLALKYCKQIFERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQS-IPPVCM 76 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~-~P~~d~ 76 (181)
..+++.. +...-.+|+|+| +--..+.+.+|+ |..++.+.. .++++++.+|+.+. .+..|.
T Consensus 32 ~~i~~~~--~~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~D~ 109 (299)
T 2h1r_A 32 DKIIYAA--KIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFPKFDV 109 (299)
T ss_dssp HHHHHHH--CCCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCCCCSE
T ss_pred HHHHHhc--CCCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcccCCE
Confidence 4556665 455667999999 222457889998 555554432 26899999999863 445688
Q ss_pred Eeccccch
Q 036440 77 IPLRLGYS 84 (181)
Q Consensus 77 ~~~~~~~~ 84 (181)
+..++-|+
T Consensus 110 Vv~n~py~ 117 (299)
T 2h1r_A 110 CTANIPYK 117 (299)
T ss_dssp EEEECCGG
T ss_pred EEEcCCcc
Confidence 75555543
No 238
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=83.23 E-value=2 Score=36.31 Aligned_cols=100 Identities=13% Similarity=0.028 Sum_probs=65.7
Q ss_pred hcCCCeEEEecCC---------CCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCCCCCcceEeccccchhhh
Q 036440 25 FERLGSLVDVGAF---------PCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQSIPPVCMIPLRLGYSHIK 87 (181)
Q Consensus 25 ~~~~~~lvDvG~~---------P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~~P~~d~~~~~~~~~~~~ 87 (181)
+..-.+++|+|.+ ...+.+.+|+ |..++.+.. .++++++.+|.++.....|.+.++.-
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP----- 267 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLP----- 267 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHHTTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCT-----
T ss_pred cCCCCEEEEccCccCHHHHhccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCc-----
Confidence 3455799999922 3457899998 666665532 36899999999976534677722211
Q ss_pred HHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC------ccCCHHHHHHHHHhC-
Q 036440 88 IMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA------KLSTEKELESLFVEV- 160 (181)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g------~eRt~~E~~~Ll~~a- 160 (181)
....++++.+...++|+| -....++..+.++++
T Consensus 268 ----------------------------------------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~l~~~~ 307 (336)
T 2yx1_A 268 ----------------------------------------KFAHKFIDKALDIVEEGGVIHYYTIGKDFDKAIKLFEKKC 307 (336)
T ss_dssp ----------------------------------------TTGGGGHHHHHHHEEEEEEEEEEEEESSSHHHHHHHHHHS
T ss_pred ----------------------------------------HhHHHHHHHHHHHcCCCCEEEEEEeecCchHHHHHHHHhc
Confidence 111267888888888888 111156777777777
Q ss_pred CCeEEEEEE
Q 036440 161 HFHHYKITP 169 (181)
Q Consensus 161 Gf~~~~i~~ 169 (181)
|+...++..
T Consensus 308 ~~~i~~~~~ 316 (336)
T 2yx1_A 308 DCEVLEKRI 316 (336)
T ss_dssp EEEEEEEEE
T ss_pred CCcEEEEEE
Confidence 777655443
No 239
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=82.88 E-value=0.91 Score=41.06 Aligned_cols=119 Identities=14% Similarity=0.049 Sum_probs=72.7
Q ss_pred hhcCCCeEEEecCCCC-------------ceEEEeec-hhhhhhhcc------CCCceEEecCCCCC---CCC-cceEec
Q 036440 24 IFERLGSLVDVGAFPC-------------VKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQS---IPP-VCMIPL 79 (181)
Q Consensus 24 d~~~~~~lvDvG~~P~-------------l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~---~P~-~d~~~~ 79 (181)
+...-.+|+|+|+-|+ .+.+.+|+ |.-++.+.. ..++.++.+|..+- .+. .|.+++
T Consensus 102 ~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~ 181 (456)
T 3m4x_A 102 AAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVV 181 (456)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEE
Confidence 4455679999993333 46788887 344433321 34699999997642 333 688877
Q ss_pred cccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHH-------HHHHHHHHHHHhccCC-------
Q 036440 80 RLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEE-------SVKILKICREAITSKA------- 145 (181)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~-------~~~iL~~~~~a~~~~g------- 145 (181)
+.-+|+.-.. |. | ..+...|..+. -.+||+.+...++|||
T Consensus 182 DaPCSg~G~~-----rr-------~--------------p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 182 DAPCSGEGMF-----RK-------D--------------PNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp ECCCCCGGGT-----TT-------C--------------HHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred CCCCCCcccc-----cc-------C--------------HHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 6655432110 00 0 00111233222 2388999999999999
Q ss_pred ---ccCCHHHHHHHHHhCCCeEEEEE
Q 036440 146 ---KLSTEKELESLFVEVHFHHYKIT 168 (181)
Q Consensus 146 ---~eRt~~E~~~Ll~~aGf~~~~i~ 168 (181)
.+-.++..+.++++.||+++.+.
T Consensus 236 s~~~eEne~vv~~~l~~~~~~l~~~~ 261 (456)
T 3m4x_A 236 TFAPEENEEIISWLVENYPVTIEEIP 261 (456)
T ss_dssp CCCGGGTHHHHHHHHHHSSEEEECCC
T ss_pred ecccccCHHHHHHHHHhCCCEEEecc
Confidence 55677889999999997766543
No 240
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=82.56 E-value=9.7 Score=34.26 Aligned_cols=109 Identities=15% Similarity=-0.010 Sum_probs=67.7
Q ss_pred CCCeEEEecCC-------------CCceEEEeech-hhhhhhcc------CCCceEEecCCCCC---CCC-cceEecccc
Q 036440 27 RLGSLVDVGAF-------------PCVKCTEFDQP-HVVANLLD------TNNLKYLADDFFQS---IPP-VCMIPLRLG 82 (181)
Q Consensus 27 ~~~~lvDvG~~-------------P~l~~~~~DlP-~Vv~~a~~------~~ri~~~~gDff~~---~P~-~d~~~~~~~ 82 (181)
.-.+|+|+|+- +..+.+.+|+- .-++.+.. ..+++++.+|..+- .+. .|.++++.=
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 55789999922 34678888873 44443321 34799999998752 333 688876655
Q ss_pred chhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHH-------HHHHHHHHHHHhccCC----------
Q 036440 83 YSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEE-------SVKILKICREAITSKA---------- 145 (181)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~-------~~~iL~~~~~a~~~~g---------- 145 (181)
+|+.-.. |. -..+...|..++ -.+||+.+...++|||
T Consensus 197 cSg~G~~-----~~---------------------~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 197 CSGEGVV-----RK---------------------DPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp CCCGGGG-----GT---------------------CTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred cCCcccc-----cC---------------------CHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 4432110 00 012234566544 2478999999999999
Q ss_pred ccCCHHHHHHHHHhCC
Q 036440 146 KLSTEKELESLFVEVH 161 (181)
Q Consensus 146 ~eRt~~E~~~Ll~~aG 161 (181)
.+-+++..+.++++.+
T Consensus 251 ~~Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 251 QEENEAVCLWLKETYP 266 (479)
T ss_dssp STTTHHHHHHHHHHST
T ss_pred cccCHHHHHHHHHHCC
Confidence 4446667788888775
No 241
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=82.08 E-value=0.55 Score=36.40 Aligned_cols=51 Identities=12% Similarity=0.116 Sum_probs=34.5
Q ss_pred CCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-------C-CCceEEecCCCCCCC-----C-cceE
Q 036440 27 RLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-------T-NNLKYLADDFFQSIP-----P-VCMI 77 (181)
Q Consensus 27 ~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-------~-~ri~~~~gDff~~~P-----~-~d~~ 77 (181)
.-.+|||+| +....+.+.+|+ |..++.+.. . ++++++.+|+.+..| . .|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEE
Confidence 346899999 222347899998 566665542 1 689999999876433 2 4776
No 242
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=81.74 E-value=3.3 Score=34.78 Aligned_cols=115 Identities=10% Similarity=-0.033 Sum_probs=68.1
Q ss_pred CCCeEEEec------------CCCC-----ceEEEeec-hhhhhhhcc-----CCCceEEecCCCCCCCC--cceEeccc
Q 036440 27 RLGSLVDVG------------AFPC-----VKCTEFDQ-PHVVANLLD-----TNNLKYLADDFFQSIPP--VCMIPLRL 81 (181)
Q Consensus 27 ~~~~lvDvG------------~~P~-----l~~~~~Dl-P~Vv~~a~~-----~~ri~~~~gDff~~~P~--~d~~~~~~ 81 (181)
.-.+|+|+| ..|. .+.+.+|+ |..++.+.. ..++.+..+|.++..+. .|.+..+-
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~NP 209 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDL 209 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEEC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEECC
Confidence 346899999 3333 67899998 556555532 23789999999986553 68885444
Q ss_pred cchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC-----------ccCCH
Q 036440 82 GYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA-----------KLSTE 150 (181)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g-----------~eRt~ 150 (181)
-|.|+.-. ..+.+|-.+. -+-.......+++.+...++|+| ...+.
T Consensus 210 Pfg~~~~~----------------~~~~~~~~~~-------~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~ 266 (344)
T 2f8l_A 210 PVGYYPDD----------------ENAKTFELCR-------EEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDF 266 (344)
T ss_dssp CCSEESCH----------------HHHTTSTTCC-------SSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTH
T ss_pred CCCCcCch----------------hhhhhccccC-------CCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchH
Confidence 33221000 0000100000 00001123467888999999988 34567
Q ss_pred HHHHHHHHhCCCeE
Q 036440 151 KELESLFVEVHFHH 164 (181)
Q Consensus 151 ~E~~~Ll~~aGf~~ 164 (181)
++++++|.+.|+..
T Consensus 267 ~~ir~~l~~~~~~~ 280 (344)
T 2f8l_A 267 AKVDKFIKKNGHIE 280 (344)
T ss_dssp HHHHHHHHHHEEEE
T ss_pred HHHHHHHHhCCeEE
Confidence 89999999988743
No 243
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=81.74 E-value=1.2 Score=38.26 Aligned_cols=106 Identities=8% Similarity=0.087 Sum_probs=63.0
Q ss_pred CCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-------CCCceEEecCCCCCCC-------CcceEecc
Q 036440 27 RLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-------TNNLKYLADDFFQSIP-------PVCMIPLR 80 (181)
Q Consensus 27 ~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-------~~ri~~~~gDff~~~P-------~~d~~~~~ 80 (181)
.-.+|+|+| +.+..+.+.+|. |..++.+.. .++++++.+|.++..| ..|++.++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 557999999 334457899998 566655432 2389999999986432 25777332
Q ss_pred ccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC--------ccCCHHH
Q 036440 81 LGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA--------KLSTEKE 152 (181)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g--------~eRt~~E 152 (181)
.-+.. .+. +.+. . ......++++.+...++|+| ...+.++
T Consensus 297 pP~~~--------------~~~----------------~~~~-~-~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~ 344 (396)
T 2as0_A 297 PPAFV--------------QHE----------------KDLK-A-GLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQM 344 (396)
T ss_dssp CCCSC--------------SSG----------------GGHH-H-HHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHH
T ss_pred CCCCC--------------CCH----------------HHHH-H-HHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHH
Confidence 21100 000 0000 0 01456678999999999999 3455566
Q ss_pred HHHHHH----hCCCeE
Q 036440 153 LESLFV----EVHFHH 164 (181)
Q Consensus 153 ~~~Ll~----~aGf~~ 164 (181)
+..++. ++|...
T Consensus 345 ~~~~v~~~~~~~~~~~ 360 (396)
T 2as0_A 345 FKDMIIAAGAKAGKFL 360 (396)
T ss_dssp HHHHHHHHHHHTTEEE
T ss_pred HHHHHHHHHHHcCCeE
Confidence 655544 566544
No 244
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=81.33 E-value=4.4 Score=31.08 Aligned_cols=61 Identities=16% Similarity=0.123 Sum_probs=39.9
Q ss_pred HHHHhhhhhcCCCeEEEec------------C-CCCceEEEeec-hhhhhhhcc-----------CCCceEEecCCCCCC
Q 036440 17 ALKYCKQIFERLGSLVDVG------------A-FPCVKCTEFDQ-PHVVANLLD-----------TNNLKYLADDFFQSI 71 (181)
Q Consensus 17 ~l~~~~~d~~~~~~lvDvG------------~-~P~l~~~~~Dl-P~Vv~~a~~-----------~~ri~~~~gDff~~~ 71 (181)
+++........-.+|+|+| . -|..+.+.+|. |..++.+.. .++++++.+|..+..
T Consensus 67 ~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (226)
T 1i1n_A 67 ALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY 146 (226)
T ss_dssp HHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC
T ss_pred HHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc
Confidence 4444421244557999999 2 36678999998 666655431 358999999987643
Q ss_pred CC---cceE
Q 036440 72 PP---VCMI 77 (181)
Q Consensus 72 P~---~d~~ 77 (181)
+. .|++
T Consensus 147 ~~~~~fD~i 155 (226)
T 1i1n_A 147 AEEAPYDAI 155 (226)
T ss_dssp GGGCCEEEE
T ss_pred ccCCCcCEE
Confidence 32 5777
No 245
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=81.17 E-value=2.7 Score=38.09 Aligned_cols=118 Identities=11% Similarity=0.000 Sum_probs=72.9
Q ss_pred hhcCCCeEEEecC------------CC-CceEEEeec-hhhhhhhcc------CCCceEEecCCCCC---CCC-cceEec
Q 036440 24 IFERLGSLVDVGA------------FP-CVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQS---IPP-VCMIPL 79 (181)
Q Consensus 24 d~~~~~~lvDvG~------------~P-~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~---~P~-~d~~~~ 79 (181)
+...-.+|+|+|+ .+ ..+.+.+|+ |.-++.+.. -. ++++.+|..+- .+. .|.+++
T Consensus 98 ~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~ 176 (464)
T 3m6w_A 98 DPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLL 176 (464)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEE
T ss_pred CcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEE
Confidence 3455579999992 33 357788887 444443321 23 89999997642 233 688876
Q ss_pred cccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHH-------HHHHHHHHHHhccCC-------
Q 036440 80 RLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEES-------VKILKICREAITSKA------- 145 (181)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~-------~~iL~~~~~a~~~~g------- 145 (181)
+.-+|+.-.. |. -..+...|..++. .+||+.+...++|||
T Consensus 177 D~PcSg~G~~-----rr---------------------~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 177 DAPCSGEGMF-----RK---------------------DREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp ECCCCCGGGT-----TT---------------------CTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred CCCcCCcccc-----cc---------------------ChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 6655432110 00 0112223444443 678999999999999
Q ss_pred ---ccCCHHHHHHHHHhC-CCeEEEEE
Q 036440 146 ---KLSTEKELESLFVEV-HFHHYKIT 168 (181)
Q Consensus 146 ---~eRt~~E~~~Ll~~a-Gf~~~~i~ 168 (181)
.+-.++..+.++++. +|+.+.+.
T Consensus 231 s~~~eEne~vv~~~l~~~~~~~l~~~~ 257 (464)
T 3m6w_A 231 TFAPEENEGVVAHFLKAHPEFRLEDAR 257 (464)
T ss_dssp CCCGGGTHHHHHHHHHHCTTEEEECCC
T ss_pred cCchhcCHHHHHHHHHHCCCcEEEecc
Confidence 455777888888887 57766543
No 246
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=80.73 E-value=3.4 Score=34.09 Aligned_cols=52 Identities=17% Similarity=0.139 Sum_probs=32.4
Q ss_pred hcCCCeEEEecCCCC---------ceEEEeechhhhhhhc--cCC------CceEE--ecCCCCCCCC--cceE
Q 036440 25 FERLGSLVDVGAFPC---------VKCTEFDQPHVVANLL--DTN------NLKYL--ADDFFQSIPP--VCMI 77 (181)
Q Consensus 25 ~~~~~~lvDvG~~P~---------l~~~~~DlP~Vv~~a~--~~~------ri~~~--~gDff~~~P~--~d~~ 77 (181)
+..-.+|||+|.-|+ -+.+.+|+-+....+. ... +++++ .+|+.+ +|. .|++
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~-l~~~~fD~V 144 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASRPHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHT-LPVERTDVI 144 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTT-SCCCCCSEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHcCcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhH-CCCCCCcEE
Confidence 344578999992222 4678888855432221 111 78999 899986 442 6887
No 247
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=79.28 E-value=16 Score=32.49 Aligned_cols=53 Identities=25% Similarity=0.364 Sum_probs=38.7
Q ss_pred hcCCCeEEEecCCCC----------ceEEEeechhhhhhhccCCCceEEecCCCCCCCC---cceE
Q 036440 25 FERLGSLVDVGAFPC----------VKCTEFDQPHVVANLLDTNNLKYLADDFFQSIPP---VCMI 77 (181)
Q Consensus 25 ~~~~~~lvDvG~~P~----------l~~~~~DlP~Vv~~a~~~~ri~~~~gDff~~~P~---~d~~ 77 (181)
+..-.++||+|+-|+ .+.+.+|.-..-+.....++|+++.+|.|+..|. .|.+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~v 274 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWM 274 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEE
Confidence 344578999995554 5789999655444445578999999999986654 4665
No 248
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=77.75 E-value=4 Score=35.89 Aligned_cols=50 Identities=14% Similarity=0.152 Sum_probs=35.0
Q ss_pred CCeEEEec-----------CCCCceEEEeechhhhhhhc-------cCCCceEEecCCCC-CCCC-cceE
Q 036440 28 LGSLVDVG-----------AFPCVKCTEFDQPHVVANLL-------DTNNLKYLADDFFQ-SIPP-VCMI 77 (181)
Q Consensus 28 ~~~lvDvG-----------~~P~l~~~~~DlP~Vv~~a~-------~~~ri~~~~gDff~-~~P~-~d~~ 77 (181)
-++||||| +.=.-+.+.+|.-+.++.+. ..++|+++.+|.-+ .+|. .|++
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~Dvi 153 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAI 153 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEE
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEE
Confidence 36899999 22123677888765554443 47899999999986 4675 7887
No 249
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=76.56 E-value=3.4 Score=34.41 Aligned_cols=52 Identities=19% Similarity=0.146 Sum_probs=32.3
Q ss_pred hcCCCeEEEecCCCC---------ceEEEeechhhhhhhc--cC------CCceEE--ecCCCCCCCC--cceE
Q 036440 25 FERLGSLVDVGAFPC---------VKCTEFDQPHVVANLL--DT------NNLKYL--ADDFFQSIPP--VCMI 77 (181)
Q Consensus 25 ~~~~~~lvDvG~~P~---------l~~~~~DlP~Vv~~a~--~~------~ri~~~--~gDff~~~P~--~d~~ 77 (181)
+..-.+|||+|.-|+ -+.+.+|+-.....+. .. .+++++ .+|+.+ +|. .|++
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~-l~~~~fD~V 152 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQPNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTK-MEPFQADTV 152 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGG-CCCCCCSEE
T ss_pred CCCCCEEEEeccCCCHHHHHHHHcCCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhh-CCCCCcCEE
Confidence 344568999992221 4678888855432221 11 178999 999876 443 6887
No 250
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=76.24 E-value=6.2 Score=34.99 Aligned_cols=23 Identities=13% Similarity=0.193 Sum_probs=19.1
Q ss_pred ccCCHHHHHHHHHhCC-CeEEEEE
Q 036440 146 KLSTEKELESLFVEVH-FHHYKIT 168 (181)
Q Consensus 146 ~eRt~~E~~~Ll~~aG-f~~~~i~ 168 (181)
.-+|.+|++.+++++| |++.++.
T Consensus 267 y~ps~~E~~~~le~~g~F~i~~le 290 (384)
T 2efj_A 267 YAPSTEEVKRIVEEEGSFEILYLE 290 (384)
T ss_dssp CCCCHHHHHHHHHHHCSEEEEEEE
T ss_pred cCCCHHHHHHHHHHcCCceEEEEE
Confidence 5589999999999985 8887764
No 251
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=75.90 E-value=4 Score=36.98 Aligned_cols=75 Identities=11% Similarity=0.083 Sum_probs=52.9
Q ss_pred CCCeEEEec-------------------CCCCceEEEeechhhhhhhccCCCceEEecCCCCC-CC--------CcceEe
Q 036440 27 RLGSLVDVG-------------------AFPCVKCTEFDQPHVVANLLDTNNLKYLADDFFQS-IP--------PVCMIP 78 (181)
Q Consensus 27 ~~~~lvDvG-------------------~~P~l~~~~~DlP~Vv~~a~~~~ri~~~~gDff~~-~P--------~~d~~~ 78 (181)
+..+||||| .+|..+.+.+|+-... ....+||+++.+|+.+. ++ ..|++
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m--~~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlV- 292 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKS--HVDELRIRTIQGDQNDAEFLDRIARRYGPFDIV- 292 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCG--GGCBTTEEEEECCTTCHHHHHHHHHHHCCEEEE-
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHH--hhcCCCcEEEEecccccchhhhhhcccCCccEE-
Confidence 346899998 2488889999984433 23467999999999762 22 25776
Q ss_pred ccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC
Q 036440 79 LRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA 145 (181)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g 145 (181)
+. ...|.| ++..+.|+.++..++|||
T Consensus 293 --------------------------------------is-dgsH~~--~d~~~aL~el~rvLKPGG 318 (419)
T 3sso_A 293 --------------------------------------ID-DGSHIN--AHVRTSFAALFPHVRPGG 318 (419)
T ss_dssp --------------------------------------EE-CSCCCH--HHHHHHHHHHGGGEEEEE
T ss_pred --------------------------------------EE-CCcccc--hhHHHHHHHHHHhcCCCe
Confidence 33 345655 345678999999999998
No 252
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=73.46 E-value=4 Score=36.19 Aligned_cols=44 Identities=11% Similarity=0.090 Sum_probs=33.6
Q ss_pred CCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc----------C----CCceEEecCCCCC
Q 036440 27 RLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD----------T----NNLKYLADDFFQS 70 (181)
Q Consensus 27 ~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~----------~----~ri~~~~gDff~~ 70 (181)
..++|||+| ++|..+.+.+|+ |.+++.++. . +|++++.+|.++-
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~ 257 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPV 257 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHH
Confidence 457999999 777678999998 677776642 1 2799999998863
No 253
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=71.22 E-value=36 Score=29.72 Aligned_cols=22 Identities=18% Similarity=0.166 Sum_probs=18.3
Q ss_pred ccCCHHHHHHHHHhCC-CeEEEE
Q 036440 146 KLSTEKELESLFVEVH-FHHYKI 167 (181)
Q Consensus 146 ~eRt~~E~~~Ll~~aG-f~~~~i 167 (181)
.-+|.+|++.+++++| |++.++
T Consensus 255 y~ps~~E~~~~ie~~G~F~i~~~ 277 (359)
T 1m6e_X 255 YTPSPTEVEAEILKEGSFLIDHI 277 (359)
T ss_dssp BCCCSHHHHHHHHHTTTBCCEEE
T ss_pred cCCCHHHHHHHHHHcCCceEEEE
Confidence 7889999999999996 466654
No 254
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=68.99 E-value=4.7 Score=34.67 Aligned_cols=108 Identities=9% Similarity=0.030 Sum_probs=62.6
Q ss_pred cCCCeEEEec-----------CCCCceEEEeec-hhhhhhhc-------c-CCCceEEecCCCCCCC-------CcceEe
Q 036440 26 ERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLL-------D-TNNLKYLADDFFQSIP-------PVCMIP 78 (181)
Q Consensus 26 ~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~-------~-~~ri~~~~gDff~~~P-------~~d~~~ 78 (181)
..-.+|+|+| +....+.+.+|. |..++.+. . .++++++.+|.++.++ ..|++.
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 4557999999 222347889998 56665443 1 2389999999986433 257773
Q ss_pred ccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC--------ccCCH
Q 036440 79 LRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA--------KLSTE 150 (181)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g--------~eRt~ 150 (181)
++--+. ..+ +.-+++.. ....++++.+...++|+| ...+.
T Consensus 299 ~dpP~~------------~~~-------------------~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 346 (396)
T 3c0k_A 299 MDPPKF------------VEN-------------------KSQLMGAC-RGYKDINMLAIQLLNEGGILLTFSCSGLMTS 346 (396)
T ss_dssp ECCSST------------TTC-------------------SSSSSCCC-THHHHHHHHHHHTEEEEEEEEEEECCTTCCH
T ss_pred ECCCCC------------CCC-------------------hhHHHHHH-HHHHHHHHHHHHhcCCCcEEEEEeCCCcCCH
Confidence 332110 000 00011111 445688999999999998 33333
Q ss_pred HHHH----HHHHhCCCeEE
Q 036440 151 KELE----SLFVEVHFHHY 165 (181)
Q Consensus 151 ~E~~----~Ll~~aGf~~~ 165 (181)
+++. +.+.++|+...
T Consensus 347 ~~~~~~i~~~~~~~g~~~~ 365 (396)
T 3c0k_A 347 DLFQKIIADAAIDAGRDVQ 365 (396)
T ss_dssp HHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHcCCeEE
Confidence 4444 45557785443
No 255
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=68.41 E-value=3.4 Score=35.46 Aligned_cols=45 Identities=16% Similarity=0.240 Sum_probs=31.1
Q ss_pred CCCeEEEecCCC----------CceEEEeec-hhhhhhhcc------CCCceEEecCCCCCC
Q 036440 27 RLGSLVDVGAFP----------CVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQSI 71 (181)
Q Consensus 27 ~~~~lvDvG~~P----------~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~~ 71 (181)
.-.+|+|+|.+. ..+.+.+|. |..++.+.. -++++++.+|.++.+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~ 270 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLL 270 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHH
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHH
Confidence 456899999322 346789998 666665542 234999999998643
No 256
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=67.79 E-value=14 Score=30.04 Aligned_cols=68 Identities=19% Similarity=0.178 Sum_probs=44.7
Q ss_pred HHHHHHhhhhhcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc--CCCceEEecCCCCC-CCC---cce
Q 036440 15 SLALKYCKQIFERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD--TNNLKYLADDFFQS-IPP---VCM 76 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~--~~ri~~~~gDff~~-~P~---~d~ 76 (181)
..+++.. +...-.+|+||| ..+..+.+.+|+ |..++.+.. .++++++.+|+.+- +|. ...
T Consensus 21 ~~iv~~~--~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~ 98 (249)
T 3ftd_A 21 KKIAEEL--NIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGKELK 98 (249)
T ss_dssp HHHHHHT--TCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSSEE
T ss_pred HHHHHhc--CCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCCcE
Confidence 5566666 556667999999 455678899998 445554443 46899999999862 332 234
Q ss_pred Eeccccch
Q 036440 77 IPLRLGYS 84 (181)
Q Consensus 77 ~~~~~~~~ 84 (181)
+..++-|+
T Consensus 99 vv~NlPy~ 106 (249)
T 3ftd_A 99 VVGNLPYN 106 (249)
T ss_dssp EEEECCTT
T ss_pred EEEECchh
Confidence 44555553
No 257
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=65.69 E-value=3.6 Score=31.67 Aligned_cols=51 Identities=12% Similarity=0.125 Sum_probs=34.2
Q ss_pred CCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCCCC----CcceE
Q 036440 27 RLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQSIP----PVCMI 77 (181)
Q Consensus 27 ~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~~P----~~d~~ 77 (181)
.-.+|||+| +....+.+.+|. |..++.+.. -++++++.+|+.+.+| ..|++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V 126 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIV 126 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEE
Confidence 347899999 111237899998 566665542 2589999999876333 25777
No 258
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=65.36 E-value=3.6 Score=38.84 Aligned_cols=111 Identities=7% Similarity=0.042 Sum_probs=65.5
Q ss_pred cCCCeEEEecCCC----------C-ceEEEeec-hhhhhhhc-------cC-CCceEEecCCCCCCC----CcceEeccc
Q 036440 26 ERLGSLVDVGAFP----------C-VKCTEFDQ-PHVVANLL-------DT-NNLKYLADDFFQSIP----PVCMIPLRL 81 (181)
Q Consensus 26 ~~~~~lvDvG~~P----------~-l~~~~~Dl-P~Vv~~a~-------~~-~ri~~~~gDff~~~P----~~d~~~~~~ 81 (181)
..-.+|||+|.+. + -+.+.+|+ |..++.+. .. ++++++.+|.++.++ ..|++.++.
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 3457899999222 2 35889998 45555443 23 589999999997432 257774433
Q ss_pred cchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCC-hHHHHHHHHHHHHHhccCC------ccCCHHHHH
Q 036440 82 GYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFG-DEESVKILKICREAITSKA------KLSTEKELE 154 (181)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~-D~~~~~iL~~~~~a~~~~g------~eRt~~E~~ 154 (181)
-+.. .+ +...+.|. ...-.++++.+...++||| -.++...-.
T Consensus 618 P~f~--------------~~-----------------~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~ 666 (703)
T 3v97_A 618 PTFS--------------NS-----------------KRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL 666 (703)
T ss_dssp CSBC--------------------------------------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCH
T ss_pred cccc--------------CC-----------------ccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCH
Confidence 2100 00 00001122 2345689999999999999 222233336
Q ss_pred HHHHhCCCeEEEE
Q 036440 155 SLFVEVHFHHYKI 167 (181)
Q Consensus 155 ~Ll~~aGf~~~~i 167 (181)
+.|++.||+...+
T Consensus 667 ~~l~~~g~~~~~i 679 (703)
T 3v97_A 667 DGLAKLGLKAQEI 679 (703)
T ss_dssp HHHHHTTEEEEEC
T ss_pred HHHHHcCCceeee
Confidence 7788999985444
No 259
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=64.97 E-value=7.8 Score=33.42 Aligned_cols=110 Identities=12% Similarity=0.069 Sum_probs=63.8
Q ss_pred cCCCeEEEec-----------CCCCceEEEeec-hhhhhhhcc-------CC-CceEEecCCCCCCC-------CcceEe
Q 036440 26 ERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD-------TN-NLKYLADDFFQSIP-------PVCMIP 78 (181)
Q Consensus 26 ~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~-------~~-ri~~~~gDff~~~P-------~~d~~~ 78 (181)
..-.+|+|+| +...-+.+.+|. |..++.+.. .+ +++++.+|.++.+| ..|++.
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 4557999999 212236889998 556655431 33 89999999987443 257772
Q ss_pred ccccchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCC-hHHHHHHHHHHHHHhccCC--------ccCC
Q 036440 79 LRLGYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFG-DEESVKILKICREAITSKA--------KLST 149 (181)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~-D~~~~~iL~~~~~a~~~~g--------~eRt 149 (181)
++--+. ..+ +. +.+. -+.-.++++.+...++|+| ...+
T Consensus 291 ~DPP~~------------~~~-------------------~~--~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~ 337 (385)
T 2b78_A 291 IDPPSF------------ARN-------------------KK--EVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMT 337 (385)
T ss_dssp ECCCCC--------------------------------------CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC
T ss_pred ECCCCC------------CCC-------------------hh--hHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC
Confidence 222100 000 00 1111 1233468888999999999 4445
Q ss_pred HHHHHHHH----HhCCCeEEEEE
Q 036440 150 EKELESLF----VEVHFHHYKIT 168 (181)
Q Consensus 150 ~~E~~~Ll----~~aGf~~~~i~ 168 (181)
.+++.+++ .++|.+.+...
T Consensus 338 ~~~~~~~i~~~~~~~g~~~~~~~ 360 (385)
T 2b78_A 338 VSQFKKQIEKGFGKQKHTYLDLQ 360 (385)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCcEEEeC
Confidence 56665554 45777744433
No 260
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=64.03 E-value=19 Score=31.86 Aligned_cols=68 Identities=19% Similarity=0.136 Sum_probs=50.5
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------C-CCCceEEEeec-hhhhhhhc--cCCCceEEecCCCC--------C
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------A-FPCVKCTEFDQ-PHVVANLL--DTNNLKYLADDFFQ--------S 70 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~-~P~l~~~~~Dl-P~Vv~~a~--~~~ri~~~~gDff~--------~ 70 (181)
..+++.. ....-..+||.. + .|..+.+.||+ |..++.+. ..+|++++.+||-+ .
T Consensus 47 ~Evl~~L--~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~~L~~~g 124 (347)
T 3tka_A 47 DEAVNGL--NIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERD 124 (347)
T ss_dssp HHHHHHT--CCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHHHHHHTT
T ss_pred HHHHHhh--CCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHHhcC
Confidence 4566666 455567899987 3 58899999998 55666553 25799999999864 1
Q ss_pred CC-CcceEeccccch
Q 036440 71 IP-PVCMIPLRLGYS 84 (181)
Q Consensus 71 ~P-~~d~~~~~~~~~ 84 (181)
++ ..|.+++++|+|
T Consensus 125 ~~~~vDgILfDLGVS 139 (347)
T 3tka_A 125 LIGKIDGILLDLGVS 139 (347)
T ss_dssp CTTCEEEEEEECSCC
T ss_pred CCCcccEEEECCccC
Confidence 33 379999999998
No 261
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=62.75 E-value=11 Score=29.89 Aligned_cols=53 Identities=13% Similarity=0.233 Sum_probs=37.1
Q ss_pred HHHHHHhhhhhcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc----CCCceEEecCCCC
Q 036440 15 SLALKYCKQIFERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD----TNNLKYLADDFFQ 69 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~----~~ri~~~~gDff~ 69 (181)
..+++.. +...-.+|+|+| +--..+.+.+|+ |..++.+.. .++++++.+|+.+
T Consensus 19 ~~i~~~~--~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~ 86 (245)
T 1yub_A 19 NQIIKQL--NLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQ 86 (245)
T ss_dssp HHHHHHC--CCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTT
T ss_pred HHHHHhc--CCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhccCCceEEEECChhh
Confidence 5666766 566667999999 111257888888 555555543 3689999999986
No 262
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=62.48 E-value=17 Score=31.12 Aligned_cols=68 Identities=25% Similarity=0.199 Sum_probs=50.4
Q ss_pred HHHHHHhhhhhcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhc-c-CCCceEEecCCCC------C--CC
Q 036440 15 SLALKYCKQIFERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLL-D-TNNLKYLADDFFQ------S--IP 72 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~-~-~~ri~~~~gDff~------~--~P 72 (181)
..+++.. +...-+.+||.+ .. +.+.+.+|. |..++.+. . .+|++++.+||-+ . +.
T Consensus 12 ~e~le~L--~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~~g~~ 88 (285)
T 1wg8_A 12 QEALDLL--AVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVE 88 (285)
T ss_dssp HHHHHHH--TCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCS
T ss_pred HHHHHhh--CCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHHcCCC
Confidence 6778877 677778999997 22 678999998 55655443 1 2699999999964 1 13
Q ss_pred CcceEeccccchh
Q 036440 73 PVCMIPLRLGYSH 85 (181)
Q Consensus 73 ~~d~~~~~~~~~~ 85 (181)
..|.+++++|+|-
T Consensus 89 ~vDgIL~DLGvSS 101 (285)
T 1wg8_A 89 RVDGILADLGVSS 101 (285)
T ss_dssp CEEEEEEECSCCH
T ss_pred CcCEEEeCCcccc
Confidence 4699999999883
No 263
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=61.39 E-value=13 Score=31.44 Aligned_cols=67 Identities=12% Similarity=0.130 Sum_probs=45.8
Q ss_pred HHHHHHhhhhhcCCCeEEEec-----------CCCCceEEEeec-hhhhhhhc----cCCCceEEecCCCC-CCCC--cc
Q 036440 15 SLALKYCKQIFERLGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLL----DTNNLKYLADDFFQ-SIPP--VC 75 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~----~~~ri~~~~gDff~-~~P~--~d 75 (181)
..+++.. +...-.+||||| +. ..+.+.+|+ |..++.+. ..++++++.+|+.+ ++|. .|
T Consensus 40 ~~Iv~~l--~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~fD 116 (295)
T 3gru_A 40 NKAVESA--NLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFN 116 (295)
T ss_dssp HHHHHHT--TCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCCS
T ss_pred HHHHHhc--CCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCcc
Confidence 4555665 455667999999 22 456788887 45555443 24799999999997 4554 57
Q ss_pred eEeccccch
Q 036440 76 MIPLRLGYS 84 (181)
Q Consensus 76 ~~~~~~~~~ 84 (181)
.+..++-|+
T Consensus 117 ~Iv~NlPy~ 125 (295)
T 3gru_A 117 KVVANLPYQ 125 (295)
T ss_dssp EEEEECCGG
T ss_pred EEEEeCccc
Confidence 777776664
No 264
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=59.90 E-value=22 Score=29.11 Aligned_cols=53 Identities=19% Similarity=0.253 Sum_probs=37.6
Q ss_pred HHHHHHhhhhhcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc----CCCceEEecCCCC
Q 036440 15 SLALKYCKQIFERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD----TNNLKYLADDFFQ 69 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~----~~ri~~~~gDff~ 69 (181)
..+++.. +...-.+|+||| +--+.+.+.+|+ |..++.+.. .++++++.+|+.+
T Consensus 19 ~~iv~~~--~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~ 86 (255)
T 3tqs_A 19 QKIVSAI--HPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQ 86 (255)
T ss_dssp HHHHHHH--CCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTT
T ss_pred HHHHHhc--CCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHh
Confidence 5666666 566678999999 222457788887 455554432 4799999999986
No 265
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=59.76 E-value=16 Score=31.28 Aligned_cols=54 Identities=15% Similarity=0.174 Sum_probs=32.0
Q ss_pred CChH-HHHHHHHHHHHHhccC-C----ccCC--HHHHHHHHHh--CCCeEEEEE-EcCCCCeEEEE
Q 036440 125 FGDE-ESVKILKICREAITSK-A----KLST--EKELESLFVE--VHFHHYKIT-PLFGLPSLIEV 179 (181)
Q Consensus 125 w~D~-~~~~iL~~~~~a~~~~-g----~eRt--~~E~~~Ll~~--aGf~~~~i~-~~~~~~~viE~ 179 (181)
|.|+ ..+.+|+.+...++|| | |--. -+++.+++++ .-|+.|++. | .+-.+-.|+
T Consensus 156 ~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~~F~~V~~~KP-aSR~~S~E~ 220 (277)
T 3evf_A 156 VTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQRRFGGTVIRNP-LSRNSTHEM 220 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCE
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHHhcCCEEEEeC-CCCCCCCce
Confidence 3344 4567899999999999 8 4444 3455555554 236666664 6 543333333
No 266
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=59.28 E-value=20 Score=28.59 Aligned_cols=56 Identities=14% Similarity=0.306 Sum_probs=36.7
Q ss_pred HHHHHHhhhhhcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc----CCCceEEecCCCC-CCC
Q 036440 15 SLALKYCKQIFERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD----TNNLKYLADDFFQ-SIP 72 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~----~~ri~~~~gDff~-~~P 72 (181)
..+++.. +...-.+|+|+| +--..+.+.+|. |..++.+.. .++++++.+|+.+ ++|
T Consensus 20 ~~i~~~~--~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~ 91 (244)
T 1qam_A 20 DKIMTNI--RLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFP 91 (244)
T ss_dssp HHHHTTC--CCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCC
T ss_pred HHHHHhC--CCCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcc
Confidence 4444444 445567999999 111257888888 555555432 3689999999986 344
No 267
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=54.30 E-value=9.6 Score=34.58 Aligned_cols=83 Identities=8% Similarity=0.023 Sum_probs=53.5
Q ss_pred hhcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc----C--CCceEEecCCCC---CCC-C-cceEeccc
Q 036440 24 IFERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD----T--NNLKYLADDFFQ---SIP-P-VCMIPLRL 81 (181)
Q Consensus 24 d~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~----~--~ri~~~~gDff~---~~P-~-~d~~~~~~ 81 (181)
...+--+||||| +--+.+.+.+|. |..++.|+. + -+|+|..+|.-+ ..+ . .|++
T Consensus 63 ~~~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v---- 138 (569)
T 4azs_A 63 ALGRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLA---- 138 (569)
T ss_dssp HHTSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEE----
T ss_pred hcCCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEE----
Confidence 345556899999 334778999998 455665542 2 368999888753 333 2 6888
Q ss_pred cchhhhHHhhhhhhhhcCCCccchhhhhhcccccceeeeeeccCChHHHHHHHHHHHHHhccCC
Q 036440 82 GYSHIKIMIAFFIRLVVGRGRLHIFSWLNFMKRVINMQIIIHVFGDEESVKILKICREAITSKA 145 (181)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iLHdw~D~~~~~iL~~~~~a~~~~g 145 (181)
+.--+||...|.....-+..+...+++++
T Consensus 139 -----------------------------------~~~e~~ehv~~~~~~~~~~~~~~tl~~~~ 167 (569)
T 4azs_A 139 -----------------------------------IGLSVFHHIVHLHGIDEVKRLLSRLADVT 167 (569)
T ss_dssp -----------------------------------EEESCHHHHHHHHCHHHHHHHHHHHHHHS
T ss_pred -----------------------------------EECcchhcCCCHHHHHHHHHHHHHhcccc
Confidence 66667777666664444445555666555
No 268
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=50.58 E-value=13 Score=31.03 Aligned_cols=53 Identities=15% Similarity=0.160 Sum_probs=36.3
Q ss_pred HHHHHHhhhhhcCCCeEEEec------------CCCC--ceEEEeec-hhhhhhhcc--CCCceEEecCCCC
Q 036440 15 SLALKYCKQIFERLGSLVDVG------------AFPC--VKCTEFDQ-PHVVANLLD--TNNLKYLADDFFQ 69 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG------------~~P~--l~~~~~Dl-P~Vv~~a~~--~~ri~~~~gDff~ 69 (181)
..+++.. +...-.+|+||| +.+. .+.+.+|+ |..++.+.. .++++++.+|+++
T Consensus 32 ~~iv~~~--~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~ 101 (279)
T 3uzu_A 32 DAIVAAI--RPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALT 101 (279)
T ss_dssp HHHHHHH--CCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGG
T ss_pred HHHHHhc--CCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhc
Confidence 5566666 566678999999 3333 44777776 455554433 4789999999986
No 269
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=49.74 E-value=16 Score=32.54 Aligned_cols=42 Identities=12% Similarity=0.095 Sum_probs=29.5
Q ss_pred CCeEEEec-----------CCCCceEEEeec-hhhhhhhcc--------------CCCceEEecCCCC
Q 036440 28 LGSLVDVG-----------AFPCVKCTEFDQ-PHVVANLLD--------------TNNLKYLADDFFQ 69 (181)
Q Consensus 28 ~~~lvDvG-----------~~P~l~~~~~Dl-P~Vv~~a~~--------------~~ri~~~~gDff~ 69 (181)
.++||=+| +||.-+.+++|+ |.|++.++. .+|++.+-+|.++
T Consensus 206 pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~ 273 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIP 273 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHH
T ss_pred CCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHH
Confidence 35677777 889888999998 678776642 2456777666653
No 270
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=45.00 E-value=23 Score=30.56 Aligned_cols=59 Identities=12% Similarity=0.108 Sum_probs=39.7
Q ss_pred eeeecc-CChHHHH-----HHHHHHHHHhccCC--ccCC-HHHHHHHHHhCCCeEEEEEEcCCCCeEE
Q 036440 119 QIIIHV-FGDEESV-----KILKICREAITSKA--KLST-EKELESLFVEVHFHHYKITPLFGLPSLI 177 (181)
Q Consensus 119 ~~iLHd-w~D~~~~-----~iL~~~~~a~~~~g--~eRt-~~E~~~Ll~~aGf~~~~i~~~~~~~~vi 177 (181)
..+.+| |+...+. .+++.++..+.|+| -++| ....++-|.+|||++.++...++....+
T Consensus 188 Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYtaag~VRR~L~~aGF~V~k~~G~g~KReml 255 (308)
T 3vyw_A 188 DAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYSSSLSVRKSLLTLGFKVGSSREIGRKRKGT 255 (308)
T ss_dssp EEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCCCHHHHHHHHHTTCEEEEEECC---CEEE
T ss_pred eEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEeCcHHHHHHHHHCCCEEEecCCCCCCCcee
Confidence 334444 5555543 68999999999999 3333 4578899999999988876655554443
No 271
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=44.24 E-value=28 Score=28.89 Aligned_cols=67 Identities=10% Similarity=0.057 Sum_probs=41.4
Q ss_pred HHHHHHhhhhhcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc---CCCceEEecCCCC-CCC---Ccce
Q 036440 15 SLALKYCKQIFERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD---TNNLKYLADDFFQ-SIP---PVCM 76 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~---~~ri~~~~gDff~-~~P---~~d~ 76 (181)
..+++.. +...- +|+||| +--..+.+.+|+ |..++.+.. .++++++.+|+++ ++| ..|.
T Consensus 37 ~~Iv~~~--~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~~ 113 (271)
T 3fut_A 37 RRIVEAA--RPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGSL 113 (271)
T ss_dssp HHHHHHH--CCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTEE
T ss_pred HHHHHhc--CCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCccE
Confidence 5566666 45555 999999 111246677776 445544432 4689999999986 344 2455
Q ss_pred Eeccccch
Q 036440 77 IPLRLGYS 84 (181)
Q Consensus 77 ~~~~~~~~ 84 (181)
+..++-|+
T Consensus 114 iv~NlPy~ 121 (271)
T 3fut_A 114 LVANLPYH 121 (271)
T ss_dssp EEEEECSS
T ss_pred EEecCccc
Confidence 55555554
No 272
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=44.04 E-value=22 Score=30.52 Aligned_cols=51 Identities=10% Similarity=0.161 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHhccC--C----ccCC--HHHHHHHHHh--CCCeEEEEE-EcCCCCeEEEE
Q 036440 128 EESVKILKICREAITSK--A----KLST--EKELESLFVE--VHFHHYKIT-PLFGLPSLIEV 179 (181)
Q Consensus 128 ~~~~~iL~~~~~a~~~~--g----~eRt--~~E~~~Ll~~--aGf~~~~i~-~~~~~~~viE~ 179 (181)
...+.+|+.+...+.|| | |-.. -+++.+++++ .-|+.+++. | .+-.+-.|+
T Consensus 176 ~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~~lk~~F~~V~~~KP-aSR~~S~E~ 237 (282)
T 3gcz_A 176 QRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELSRLQLKHGGGLVRVP-LSRNSTHEM 237 (282)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCE
T ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHHHHHHHHHhcCCEEEEcC-CCcccCcce
Confidence 34457788889999998 8 4444 4455555554 236666654 5 443333343
No 273
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=43.32 E-value=27 Score=30.44 Aligned_cols=34 Identities=6% Similarity=0.038 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhccCC--------ccCCHHHHHHHHH----hCCCeE
Q 036440 131 VKILKICREAITSKA--------KLSTEKELESLFV----EVHFHH 164 (181)
Q Consensus 131 ~~iL~~~~~a~~~~g--------~eRt~~E~~~Ll~----~aGf~~ 164 (181)
.++++.+...++||| ...+.++|...+. ++|...
T Consensus 306 ~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~ 351 (393)
T 4dmg_A 306 VDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRL 351 (393)
T ss_dssp HHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeE
Confidence 478899999999999 4556667666554 456543
No 274
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=39.75 E-value=27 Score=32.97 Aligned_cols=50 Identities=14% Similarity=0.106 Sum_probs=33.7
Q ss_pred CCeEEEec----------------CCCCceEEEeechhhhhhh-------ccCCCceEEecCCCC-CCCC-cceE
Q 036440 28 LGSLVDVG----------------AFPCVKCTEFDQPHVVANL-------LDTNNLKYLADDFFQ-SIPP-VCMI 77 (181)
Q Consensus 28 ~~~lvDvG----------------~~P~l~~~~~DlP~Vv~~a-------~~~~ri~~~~gDff~-~~P~-~d~~ 77 (181)
...|+||| .--++|...++--+.+..+ ...++|+++.||+-+ .+|. +|++
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDII 432 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADII 432 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEE
Confidence 35799999 2223455666654433332 238899999999997 5786 7887
No 275
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=32.71 E-value=52 Score=25.89 Aligned_cols=53 Identities=21% Similarity=0.138 Sum_probs=33.2
Q ss_pred HHHHHhhhhhcCCCeEEEec--CC----------CCceEEEeec-hhhhhhhccCCCceEEecCCCCCCC----CcceE
Q 036440 16 LALKYCKQIFERLGSLVDVG--AF----------PCVKCTEFDQ-PHVVANLLDTNNLKYLADDFFQSIP----PVCMI 77 (181)
Q Consensus 16 ~~l~~~~~d~~~~~~lvDvG--~~----------P~l~~~~~Dl-P~Vv~~a~~~~ri~~~~gDff~~~P----~~d~~ 77 (181)
.+++...+.+..-.++|+|| .+ -+...+..|+ |+-++ ++-.|.|++.+ .+|++
T Consensus 24 ~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~---------~v~dDiF~P~~~~Y~~~DLI 93 (153)
T 2k4m_A 24 DLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG---------IVRDDITSPRMEIYRGAALI 93 (153)
T ss_dssp HHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT---------EECCCSSSCCHHHHTTEEEE
T ss_pred HHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc---------eEEccCCCCcccccCCcCEE
Confidence 34444443455557999999 33 3344667775 33333 88899999765 36666
No 276
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=32.52 E-value=62 Score=27.65 Aligned_cols=56 Identities=16% Similarity=0.160 Sum_probs=29.1
Q ss_pred hcCCCeEEEecCCCC-----------c---eE--EEeechhhhhhhccCCCc---eEEec-CCCCCCC-CcceEeccc
Q 036440 25 FERLGSLVDVGAFPC-----------V---KC--TEFDQPHVVANLLDTNNL---KYLAD-DFFQSIP-PVCMIPLRL 81 (181)
Q Consensus 25 ~~~~~~lvDvG~~P~-----------l---~~--~~~DlP~Vv~~a~~~~ri---~~~~g-Dff~~~P-~~d~~~~~~ 81 (181)
++.-.+|||+|+-|+ + ++ +..|+ +..+....+..+ ++..| ||++.-| ..|+++-+.
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~~P~~~~~~Gv~~i~~~~G~Df~~~~~~~~DvVLSDM 147 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HEEPMLMQSYGWNIVTMKSGVDVFYKPSEISDTLLCDI 147 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SCCCCCCCSTTGGGEEEECSCCGGGSCCCCCSEEEECC
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-ccCCCcccCCCceEEEeeccCCccCCCCCCCCEEEeCC
Confidence 445579999994443 2 22 22232 122222222455 55547 9997444 368874444
No 277
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=31.82 E-value=1.7e+02 Score=25.28 Aligned_cols=41 Identities=2% Similarity=-0.108 Sum_probs=27.9
Q ss_pred ceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCCC-C-cceEecc
Q 036440 40 VKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSIP-P-VCMIPLR 80 (181)
Q Consensus 40 l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~P-~-~d~~~~~ 80 (181)
.+.+.+|. |..++.+. ..++|++..+|+++..+ . .|++..+
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~N 314 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVAN 314 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEEC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEEC
Confidence 56888898 56666553 35689999999997433 2 5777333
No 278
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=31.00 E-value=62 Score=26.24 Aligned_cols=53 Identities=13% Similarity=0.101 Sum_probs=36.3
Q ss_pred HHHHHHhhhhhcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc----CCCceEEecCCCC
Q 036440 15 SLALKYCKQIFERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD----TNNLKYLADDFFQ 69 (181)
Q Consensus 15 ~~~l~~~~~d~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~----~~ri~~~~gDff~ 69 (181)
..+++.. +...-.+|+||| +.++.+.+.+|+ |..++.+.. .++++++.+|+.+
T Consensus 11 ~~iv~~~--~~~~~~~VLEIG~G~G~lt~l~~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~ 78 (252)
T 1qyr_A 11 DSIVSAI--NPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMT 78 (252)
T ss_dssp HHHHHHH--CCCTTCCEEEECCTTTTTHHHHHTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGG
T ss_pred HHHHHhc--CCCCcCEEEEECCCCcHHHHhhhCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhh
Confidence 5666666 566667899999 223323788887 555555543 2589999999986
No 279
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=30.84 E-value=58 Score=28.82 Aligned_cols=41 Identities=12% Similarity=0.118 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHHHHhccCC-------ccCCHHHHHHHHHhCCCeEEEEEE
Q 036440 127 DEESVKILKICREAITSKA-------KLSTEKELESLFVEVHFHHYKITP 169 (181)
Q Consensus 127 D~~~~~iL~~~~~a~~~~g-------~eRt~~E~~~Ll~~aGf~~~~i~~ 169 (181)
..=|...|.-+.+.+.||| .-...+++.++.. -|+.+++.+
T Consensus 193 ~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~~~L~~lrk--~F~~VK~fK 240 (344)
T 3r24_A 193 EGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMG--HFSWWTAFV 240 (344)
T ss_dssp CTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHT--TEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCcCCCEEEEEEecCCCHHHHHHHHh--hCCeEEEEC
Confidence 3457778888999999999 2222466766663 899998886
No 280
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=28.61 E-value=48 Score=21.52 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=25.7
Q ss_pred CCCCceEEEeechhh-hhhhccCCCceEEecCC
Q 036440 36 AFPCVKCTEFDQPHV-VANLLDTNNLKYLADDF 67 (181)
Q Consensus 36 ~~P~l~~~~~DlP~V-v~~a~~~~ri~~~~gDf 67 (181)
.||.++++...+|.. +......+.|.+++-|.
T Consensus 28 ~~~~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~ 60 (65)
T 2z30_B 28 QFKLIPAVVVDVPANAVGKLKKMPGVEKVEFDH 60 (65)
T ss_dssp ECSSSSEEEEEECGGGHHHHHTSTTEEEEEECC
T ss_pred EecCCcEEEEEeCHHHHHHHhcCCCceEEecCc
Confidence 689999999999975 44444578899999885
No 281
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=28.15 E-value=67 Score=20.88 Aligned_cols=20 Identities=10% Similarity=0.105 Sum_probs=17.0
Q ss_pred CCHHHHHHHHHhCCCeEEEE
Q 036440 148 STEKELESLFVEVHFHHYKI 167 (181)
Q Consensus 148 Rt~~E~~~Ll~~aGf~~~~i 167 (181)
.+.+|+..+|++.||..++.
T Consensus 5 ~~~~elik~L~~~G~~~~r~ 24 (70)
T 1whz_A 5 PRPEEVARKLRRLGFVERMA 24 (70)
T ss_dssp CCHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHCCCEEeCC
Confidence 57889999999999987653
No 282
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=26.03 E-value=1e+02 Score=26.60 Aligned_cols=50 Identities=16% Similarity=0.194 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhccC-C----ccCC--HHHHHHHHHh--CCCeEEEEE-EcCCCCeEEEE
Q 036440 129 ESVKILKICREAITSK-A----KLST--EKELESLFVE--VHFHHYKIT-PLFGLPSLIEV 179 (181)
Q Consensus 129 ~~~~iL~~~~~a~~~~-g----~eRt--~~E~~~Ll~~--aGf~~~~i~-~~~~~~~viE~ 179 (181)
...++|+.+...+.|| | |-.. -+++..+++. .-|+.+.+. | .+-.+-.|.
T Consensus 168 rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~~F~~V~~~KP-aSR~~S~E~ 227 (300)
T 3eld_A 168 RTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRFGGGIVRVP-FSRNSTHEM 227 (300)
T ss_dssp HHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCE
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHHhCCcEEEEeC-CCCCCChHH
Confidence 4467788899999999 8 3333 3344555544 236666654 5 443333333
No 283
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=23.55 E-value=3.6e+02 Score=23.38 Aligned_cols=52 Identities=8% Similarity=0.004 Sum_probs=35.9
Q ss_pred hcCCCeEEEec----------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCCCCC-cceE
Q 036440 25 FERLGSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQSIPP-VCMI 77 (181)
Q Consensus 25 ~~~~~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~~P~-~d~~ 77 (181)
...-.+++|+| +--..+.+.+|. |..++.+.. -+ ++++.+|+++..+. .|++
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~~fD~V 357 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTV 357 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCccCCCEE
Confidence 45667999999 112447888887 556665532 23 89999999986553 6777
No 284
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=22.10 E-value=1.6e+02 Score=18.75 Aligned_cols=23 Identities=9% Similarity=-0.021 Sum_probs=18.1
Q ss_pred ccCCHHHHHHHHHhCCCeEEEEE
Q 036440 146 KLSTEKELESLFVEVHFHHYKIT 168 (181)
Q Consensus 146 ~eRt~~E~~~Ll~~aGf~~~~i~ 168 (181)
.-.|.+|-+..|+++||+...+.
T Consensus 14 ~G~~~~~A~~~L~~~Gl~~~~~~ 36 (71)
T 3ouv_A 14 AGQTVDVAQKNMNVYGFTKFSQA 36 (71)
T ss_dssp TTCBHHHHHHHHHHTTCCCEEEE
T ss_pred CCCCHHHHHHHHHHCCCeEEEEE
Confidence 34578899999999999876543
No 285
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=21.00 E-value=38 Score=28.69 Aligned_cols=42 Identities=14% Similarity=0.040 Sum_probs=28.6
Q ss_pred CeEEEec----------CCCCceEEEeec-hhhhhhhcc------CCCceEEecCCCCC
Q 036440 29 GSLVDVG----------AFPCVKCTEFDQ-PHVVANLLD------TNNLKYLADDFFQS 70 (181)
Q Consensus 29 ~~lvDvG----------~~P~l~~~~~Dl-P~Vv~~a~~------~~ri~~~~gDff~~ 70 (181)
.+|+|+| +-..-+.+.+|. |..++.+.. -++++++.+|.++-
T Consensus 215 ~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~ 273 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEF 273 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHH
T ss_pred CEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHH
Confidence 6799999 222346788887 555554431 25899999998753
No 286
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=20.94 E-value=2.2e+02 Score=24.57 Aligned_cols=41 Identities=10% Similarity=-0.040 Sum_probs=28.3
Q ss_pred ceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCCC-C-cceEecc
Q 036440 40 VKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSIP-P-VCMIPLR 80 (181)
Q Consensus 40 l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~P-~-~d~~~~~ 80 (181)
.+.+.+|. |..++.+. ..++|++..+|+++-.+ . .|++..+
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~N 307 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISN 307 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEEC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEEC
Confidence 46888888 55665543 35689999999997433 2 5777444
No 287
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=20.75 E-value=1.4e+02 Score=25.68 Aligned_cols=41 Identities=12% Similarity=0.033 Sum_probs=28.6
Q ss_pred ceEEEeec-hhhhhhhc-------cCCCceEEecCCCCCCCC--cceEecc
Q 036440 40 VKCTEFDQ-PHVVANLL-------DTNNLKYLADDFFQSIPP--VCMIPLR 80 (181)
Q Consensus 40 l~~~~~Dl-P~Vv~~a~-------~~~ri~~~~gDff~~~P~--~d~~~~~ 80 (181)
.+.+.+|. |..++.+. ..++|++..+|+++..+. .|++..+
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~N 308 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITN 308 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEEC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEEC
Confidence 56888998 56666554 245899999999975432 5777443
Done!