BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036442
(78 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4K5T2|CGL_ARATH Bifunctional cystathionine gamma-lyase/cysteine synthase
OS=Arabidopsis thaliana GN=DES1 PE=1 SV=1
Length = 323
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 57/72 (79%), Positives = 63/72 (87%), Gaps = 3/72 (4%)
Query: 7 MEDNYHKRAIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIK 66
MED + IK D T+LIGNTPMVYLN +VDGCVARIAAKLEMMEPC S+KDRIA+SMIK
Sbjct: 1 MED---RVLIKNDVTELIGNTPMVYLNKIVDGCVARIAAKLEMMEPCSSIKDRIAYSMIK 57
Query: 67 DAEEKGLITPGK 78
DAE+KGLITPGK
Sbjct: 58 DAEDKGLITPGK 69
>sp|Q43317|CYSK_CITLA Cysteine synthase OS=Citrullus lanatus PE=1 SV=1
Length = 325
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 57/66 (86%)
Query: 13 KRAIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKG 72
K I KD T+LIGNTP+VYLN VVDGCVAR+AAKLEMMEPC SVKDRI +SMI DAE KG
Sbjct: 5 KSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDRIGYSMISDAENKG 64
Query: 73 LITPGK 78
LITPG+
Sbjct: 65 LITPGE 70
>sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum
PE=2 SV=1
Length = 374
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 56/63 (88%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
I +D TQLIGNTPMVYLN +V GCVA IAAKLE+MEPCCSVKDRI FSMI DAEEKGLI+
Sbjct: 67 IAEDVTQLIGNTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMISDAEEKGLIS 126
Query: 76 PGK 78
PGK
Sbjct: 127 PGK 129
>sp|O81154|CYSK_SOLTU Cysteine synthase OS=Solanum tuberosum PE=2 SV=1
Length = 325
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/67 (77%), Positives = 57/67 (85%)
Query: 12 HKRAIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEK 71
K I KD T+LIGNTP+VYLNNVVDGCVAR+AAKLE MEPC SVKDRI +SMI DAEEK
Sbjct: 4 EKIGIAKDVTELIGNTPLVYLNNVVDGCVARVAAKLESMEPCSSVKDRIGYSMITDAEEK 63
Query: 72 GLITPGK 78
GLI PG+
Sbjct: 64 GLIKPGE 70
>sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum
PE=2 SV=1
Length = 386
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 55/63 (87%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
I +D TQLIGNTPMVYLN + GCVA IAAKLE+MEPCCSVKDRI FSMI DAEEKGLI+
Sbjct: 69 IAEDVTQLIGNTPMVYLNTIAKGCVANIAAKLEIMEPCCSVKDRIGFSMIVDAEEKGLIS 128
Query: 76 PGK 78
PGK
Sbjct: 129 PGK 131
>sp|P47999|CYSKP_ARATH Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis
thaliana GN=OASB PE=1 SV=2
Length = 392
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 55/63 (87%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
I +A QLIG TPMVYLNNVV GCVA +AAKLE+MEPCCSVKDRI +SMI DAEEKGLIT
Sbjct: 75 IADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKDRIGYSMITDAEEKGLIT 134
Query: 76 PGK 78
PGK
Sbjct: 135 PGK 137
>sp|Q9XEA6|CYSK1_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2
SV=2
Length = 321
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 54/63 (85%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
I KD T+LIGNTP+VYLN V DGCV R+AAKLE MEPC SVKDRI +SMI DAEEKGLIT
Sbjct: 5 IAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIT 64
Query: 76 PGK 78
PGK
Sbjct: 65 PGK 67
>sp|O23733|CYSK1_BRAJU Cysteine synthase OS=Brassica juncea PE=2 SV=1
Length = 322
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/63 (77%), Positives = 55/63 (87%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
I KD T+LIGNTP+VYLNNV +GCV R+AAKLEMMEPC SVKDRI FSMI DAE+KGLI
Sbjct: 5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEQKGLIK 64
Query: 76 PGK 78
PG+
Sbjct: 65 PGE 67
>sp|P47998|CYSK1_ARATH Cysteine synthase OS=Arabidopsis thaliana GN=OASA1 PE=1 SV=2
Length = 322
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/63 (77%), Positives = 55/63 (87%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
I KD T+LIGNTP+VYLNNV +GCV R+AAKLEMMEPC SVKDRI FSMI DAE+KGLI
Sbjct: 5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIK 64
Query: 76 PGK 78
PG+
Sbjct: 65 PGE 67
>sp|P38076|CYSK_WHEAT Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1
Length = 325
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 53/64 (82%)
Query: 15 AIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLI 74
AI KD T+LIGNTP+VYLN V DGCV R+AAKLE MEPC SVKDRI +SMI DAEEKG I
Sbjct: 8 AIAKDVTELIGNTPLVYLNKVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGFI 67
Query: 75 TPGK 78
PGK
Sbjct: 68 VPGK 71
>sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2
SV=1
Length = 325
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 50/65 (76%), Positives = 56/65 (86%)
Query: 14 RAIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGL 73
++I D T LIGNTP+VYLN VVDGC A+IAAKLE+MEPC SVKDRI +SMI DAEEKGL
Sbjct: 6 QSIASDVTALIGNTPLVYLNKVVDGCEAQIAAKLEIMEPCSSVKDRIGYSMITDAEEKGL 65
Query: 74 ITPGK 78
ITPGK
Sbjct: 66 ITPGK 70
>sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1 SV=1
Length = 325
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 54/67 (80%)
Query: 12 HKRAIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEK 71
K I KD T+LIG TP+VYLN V DGCVAR+AAKLE MEPC SVKDRI FSMI DAE+
Sbjct: 4 EKAFIAKDVTELIGKTPLVYLNTVADGCVARVAAKLEGMEPCSSVKDRIGFSMITDAEKS 63
Query: 72 GLITPGK 78
GLITPG+
Sbjct: 64 GLITPGE 70
>sp|O23735|CYSK2_BRAJU Cysteine synthase OS=Brassica juncea PE=2 SV=1
Length = 324
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 54/64 (84%)
Query: 15 AIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLI 74
I D T+LIGNTP+VYLN+V +GCV R+AAKLEMMEPC SVKDRI FSMI DAE+KGLI
Sbjct: 6 GIANDVTELIGNTPLVYLNSVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLI 65
Query: 75 TPGK 78
PG+
Sbjct: 66 KPGE 69
>sp|P80608|CYSK_MAIZE Cysteine synthase OS=Zea mays PE=1 SV=2
Length = 325
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 52/63 (82%)
Query: 15 AIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLI 74
+I KD T+LIGNTP+VYLN V DGCV R AKLE MEPC SVKDRI +SMI DAEEKGLI
Sbjct: 7 SIAKDVTELIGNTPLVYLNKVTDGCVGRSRAKLESMEPCSSVKDRIGYSMITDAEEKGLI 66
Query: 75 TPG 77
TPG
Sbjct: 67 TPG 69
>sp|P32260|CYSKP_SPIOL Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea
GN=CYSK PE=1 SV=2
Length = 383
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 53/63 (84%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
I +D +QLIG TPMVYLNNV G VA IAAKLE MEPCCSVKDRI +SMI DAE+KG+IT
Sbjct: 67 IAEDVSQLIGKTPMVYLNNVSKGSVANIAAKLESMEPCCSVKDRIGYSMIDDAEQKGVIT 126
Query: 76 PGK 78
PGK
Sbjct: 127 PGK 129
>sp|Q43725|CYSKM_ARATH Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC
PE=1 SV=3
Length = 430
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 53/63 (84%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
I + +QLIG TPMVYLN++ GCVA IAAKLE+MEPCCSVKDRI +SM+ DAE+KG I+
Sbjct: 113 IADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFIS 172
Query: 76 PGK 78
PGK
Sbjct: 173 PGK 175
>sp|O22682|CYSK4_ARATH Probable cysteine synthase, chloroplastic OS=Arabidopsis thaliana
GN=At3g03630 PE=1 SV=1
Length = 404
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 49/63 (77%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
I +D TQLIG+TPMVYLN V DGC+A IAAKLE MEPC SVKDRI SMI +AE G IT
Sbjct: 99 IAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCRSVKDRIGLSMINEAENSGAIT 158
Query: 76 PGK 78
P K
Sbjct: 159 PRK 161
>sp|Q76MX2|CAS1_SOLTU Bifunctional L-3-cyanoalanine synthase/cysteine synthase 1,
mitochondrial OS=Solanum tuberosum GN=PCAS-1 PE=1 SV=1
Length = 351
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 49/63 (77%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
IK +QLIG TP+VYLN V +GC A IA K EMM+P S+KDR AF+MI DAE+KGLIT
Sbjct: 32 IKTQVSQLIGKTPLVYLNKVSEGCGAYIAVKQEMMQPTSSIKDRPAFAMINDAEKKGLIT 91
Query: 76 PGK 78
PGK
Sbjct: 92 PGK 94
>sp|Q1KLZ2|CAS1_MALDO L-3-cyanoalanine synthase 1, mitochondrial OS=Malus domestica
GN=CAS1 PE=1 SV=1
Length = 376
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 47/63 (74%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
IK +QLIG TP+VYLN V +GC A IA K EM +P S+KDR A SMI DAEEKGLIT
Sbjct: 55 IKTQVSQLIGRTPIVYLNKVTEGCGAYIAVKQEMFQPTASIKDRPALSMINDAEEKGLIT 114
Query: 76 PGK 78
PG+
Sbjct: 115 PGE 117
>sp|Q1KLZ1|CAS2_MALDO L-3-cyanoalanine synthase 2, mitochondrial OS=Malus domestica
GN=CAS2 PE=1 SV=1
Length = 375
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 47/63 (74%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
IK +QLIG TP+VYLN V +GC A IA K EM +P S+KDR A SMI DAEEKGLIT
Sbjct: 56 IKTQVSQLIGRTPIVYLNKVTEGCGAFIAVKQEMFQPTASIKDRPALSMINDAEEKGLIT 115
Query: 76 PGK 78
PG+
Sbjct: 116 PGE 118
>sp|Q43153|CYSC_SPIOL Bifunctional L-3-cyanoalanine synthase/cysteine synthase,
mitochondrial OS=Spinacia oleracea GN=CYSC PE=1 SV=1
Length = 368
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 49/63 (77%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
IK + +QLIG TP+VYL+ + +G A IA K EMM+P SVKDR A +MI+DAE+KGLI+
Sbjct: 49 IKTNVSQLIGRTPLVYLSKISEGSGAYIAVKQEMMQPTASVKDRPALAMIEDAEKKGLIS 108
Query: 76 PGK 78
PGK
Sbjct: 109 PGK 111
>sp|Q9FS29|CAS2_SOLTU Bifunctional L-3-cyanoalanine synthase/cysteine synthase 2,
mitochondrial OS=Solanum tuberosum GN=PCAS-2 PE=1 SV=1
Length = 347
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 46/63 (73%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
IK + +QLIG TPMVYL V +GC A IA K EM +P S+KDR A +MI DAE+KGLI+
Sbjct: 28 IKSEVSQLIGKTPMVYLKKVTEGCGAYIAVKQEMFQPTSSIKDRPALAMINDAEKKGLIS 87
Query: 76 PGK 78
P K
Sbjct: 88 PEK 90
>sp|Q9S757|CYSC1_ARATH Bifunctional L-3-cyanoalanine synthase/cysteine synthase C1,
mitochondrial OS=Arabidopsis thaliana GN=CYSC1 PE=1 SV=1
Length = 368
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 47/62 (75%)
Query: 17 KKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITP 76
K+DA+ LIG TP+V+LN V +GC A +AAK E +P CS+KDR A +MI DAE+K LI P
Sbjct: 50 KRDASLLIGKTPLVFLNKVTEGCEAYVAAKQEHFQPTCSIKDRPAIAMIADAEKKKLIIP 109
Query: 77 GK 78
GK
Sbjct: 110 GK 111
>sp|O32978|CYSK_MYCLE O-acetylserine sulfhydrylase OS=Mycobacterium leprae (strain TN)
GN=cysK PE=3 SV=1
Length = 310
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 42/62 (67%)
Query: 15 AIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLI 74
+I +D TQL+GNTP+V L V +G +A + AKLE P SVKDRI +MI AEE GLI
Sbjct: 2 SIAEDVTQLVGNTPLVRLRRVTEGALADVVAKLESFNPANSVKDRIGVAMIDTAEEAGLI 61
Query: 75 TP 76
P
Sbjct: 62 KP 63
>sp|P73410|CYSK_SYNY3 Cysteine synthase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=cysK PE=3 SV=2
Length = 312
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 16 IKKDATQLIGNTPMVYLNNV--VDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGL 73
I + T+LIG TP+V LN + ++GC A+I KLE M P SVKDRI +MI AE++GL
Sbjct: 3 IASNITELIGRTPLVRLNRIPLLEGCGAKIVVKLEGMNPAASVKDRIGINMINRAEQEGL 62
Query: 74 ITPGK 78
I PGK
Sbjct: 63 IEPGK 67
>sp|P0A534|CYSK_MYCTU O-acetylserine sulfhydrylase OS=Mycobacterium tuberculosis
GN=cysK1 PE=1 SV=1
Length = 310
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/62 (56%), Positives = 42/62 (67%)
Query: 15 AIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLI 74
+I +D TQLIG TP+V L V DG VA I AKLE P SVKDRI +M++ AE+ GLI
Sbjct: 2 SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLI 61
Query: 75 TP 76
P
Sbjct: 62 KP 63
>sp|P0A535|CYSK_MYCBO O-acetylserine sulfhydrylase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=cysK PE=3 SV=1
Length = 310
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/62 (56%), Positives = 42/62 (67%)
Query: 15 AIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLI 74
+I +D TQLIG TP+V L V DG VA I AKLE P SVKDRI +M++ AE+ GLI
Sbjct: 2 SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLI 61
Query: 75 TP 76
P
Sbjct: 62 KP 63
>sp|Q8CMT6|CYSK_STAES Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=cysK PE=3 SV=1
Length = 310
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 39/57 (68%)
Query: 21 TQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77
TQ+IGNTP+V L NVVD A I KLE P SVKDRIA +MI+ AE +G I PG
Sbjct: 10 TQIIGNTPVVKLRNVVDDDAADIYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPG 66
>sp|Q5HRP1|CYSK_STAEQ Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=cysK PE=3 SV=1
Length = 310
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 39/57 (68%)
Query: 21 TQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77
TQ+IGNTP+V L NVVD A I KLE P SVKDRIA +MI+ AE +G I PG
Sbjct: 10 TQIIGNTPVVKLRNVVDDDAADIYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPG 66
>sp|P63872|CYSK_STAAW Cysteine synthase OS=Staphylococcus aureus (strain MW2) GN=cysK
PE=3 SV=1
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 21 TQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77
TQ+IG TP+V L NVVD A + KLE P SVKDRIA +MI+ AE +G I PG
Sbjct: 10 TQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPG 66
>sp|Q6GBX5|CYSK_STAAS Cysteine synthase OS=Staphylococcus aureus (strain MSSA476)
GN=cysK PE=3 SV=1
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 21 TQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77
TQ+IG TP+V L NVVD A + KLE P SVKDRIA +MI+ AE +G I PG
Sbjct: 10 TQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPG 66
>sp|Q6GJF8|CYSK_STAAR Cysteine synthase OS=Staphylococcus aureus (strain MRSA252)
GN=cysK PE=3 SV=1
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 21 TQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77
TQ+IG TP+V L NVVD A + KLE P SVKDRIA +MI+ AE +G I PG
Sbjct: 10 TQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPG 66
>sp|P63871|CYSK_STAAN Cysteine synthase OS=Staphylococcus aureus (strain N315) GN=cysK
PE=1 SV=1
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 21 TQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77
TQ+IG TP+V L NVVD A + KLE P SVKDRIA +MI+ AE +G I PG
Sbjct: 10 TQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPG 66
>sp|P63870|CYSK_STAAM Cysteine synthase OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=cysK PE=1 SV=1
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 21 TQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77
TQ+IG TP+V L NVVD A + KLE P SVKDRIA +MI+ AE +G I PG
Sbjct: 10 TQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPG 66
>sp|Q5HIG2|CYSK_STAAC Cysteine synthase OS=Staphylococcus aureus (strain COL) GN=cysK
PE=3 SV=1
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 21 TQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77
TQ+IG TP+V L NVVD A + KLE P SVKDRIA +MI+ AE +G I PG
Sbjct: 10 TQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPG 66
>sp|Q59966|SRPG_SYNE7 Cysteine synthase, plasmid OS=Synechococcus elongatus (strain PCC
7942) GN=srpG PE=3 SV=1
Length = 329
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 19 DATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPGK 78
D +Q IG TP+V LN +V G A + AK+E P SVK RI +MI DAE++GL+ PGK
Sbjct: 10 DNSQTIGKTPLVRLNRIVKGAPATVLAKIEGRNPAYSVKCRIGAAMIWDAEQRGLLGPGK 69
>sp|Q7DDL5|CYSK_NEIMB Cysteine synthase OS=Neisseria meningitidis serogroup B (strain
MC58) GN=cysK PE=1 SV=1
Length = 310
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLI 74
I T+LIGNTP+V LN + +G A +A KLE P SVKDRIA +MI+ AE+ G I
Sbjct: 3 IANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVKDRIAEAMIEGAEKAGKI 61
>sp|Q5XAQ3|CYSK_STRP6 Cysteine synthase OS=Streptococcus pyogenes serotype M6 (strain
ATCC BAA-946 / MGAS10394) GN=cysK PE=1 SV=3
Length = 313
Score = 62.8 bits (151), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
I K T+L+G TP++ LN ++ A + KLE P SVKDRIA SMI+ AE +GLI+
Sbjct: 4 IYKTITELVGQTPIIKLNRLIPNEAADVYVKLEAFNPGSSVKDRIALSMIEAAEAEGLIS 63
Query: 76 PG 77
PG
Sbjct: 64 PG 65
>sp|P50867|CYSK_EMENI Cysteine synthase OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=cysB PE=3 SV=2
Length = 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 3 LEASMEDNYHKRAIKKDA-----TQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVK 57
L ++ E Y+ R + T+ IGNTP++ L + + + I AK E P SVK
Sbjct: 14 LRSAAESPYNVRVSQAQGFVNGLTEAIGNTPLIRLKRLSEETGSNILAKAEFQNPGGSVK 73
Query: 58 DRIAFSMIKDAEEKGLITPG 77
DR A ++KDAEE+GL+ PG
Sbjct: 74 DRAALYVVKDAEERGLLKPG 93
>sp|P37887|CYSK_BACSU Cysteine synthase OS=Bacillus subtilis (strain 168) GN=cysK PE=1
SV=3
Length = 308
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 21 TQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77
T+LIGNTP+V LN + D A + KLE M P SVKDRI +MI+ AE++G + G
Sbjct: 9 TELIGNTPIVKLNRLADENSADVYLKLEYMNPGSSVKDRIGLAMIEAAEKEGKLKAG 65
>sp|O34476|CYSM_BACSU Probable cysteine synthase OS=Bacillus subtilis (strain 168)
GN=ytkP PE=3 SV=1
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
I + LIG+TP+V LN + A++ KLE P SVKDR A+ MI +AE+ GL+
Sbjct: 4 IVANTADLIGDTPLVRLNRLQPENAAQVYLKLEFFNPSGSVKDRAAYQMIIEAEQNGLLK 63
Query: 76 PG 77
PG
Sbjct: 64 PG 65
>sp|Q7D8W0|Y1077_MYCTU Putative cystathionine beta-synthase Rv1077 OS=Mycobacterium
tuberculosis GN=cbs PE=1 SV=1
Length = 464
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
I + ++LIG TP+V LN+VV +AAK+E + P S KDRIA MI+ AE G +
Sbjct: 3 IAQHISELIGGTPLVRLNSVVPDGAGTVAAKVEYLNPGGSSKDRIAVKMIEAAEASGQLK 62
Query: 76 PG 77
PG
Sbjct: 63 PG 64
>sp|O05393|MCCA_BACSU O-acetylserine dependent cystathionine beta-synthase OS=Bacillus
subtilis (strain 168) GN=mccA PE=1 SV=1
Length = 307
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 19 DATQLIGNTPMVYLNN--VVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITP 76
D T+LIGNTP++ L N V +G + AKLEMM P S+KDR+ +I+DA + G + P
Sbjct: 6 DITELIGNTPLLRLKNFDVPEGVA--VYAKLEMMNPGGSIKDRLGDMLIRDALDSGKVKP 63
Query: 77 G 77
G
Sbjct: 64 G 64
>sp|Q59447|CYSK_FLAS3 Cysteine synthase OS=Flavobacterium sp. (strain K3-15 / DSM
ID92-509) GN=cysK PE=3 SV=1
Length = 307
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 18 KDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLI 74
++A + IGNTP+V +NN+ + I KLE P S+KDRIA +MI+DAE KGL+
Sbjct: 4 QNALETIGNTPVVKINNLFNS-DHEIWIKLEKSNPGGSIKDRIALAMIEDAEAKGLL 59
>sp|P53206|CYSK_YEAST Putative cysteine synthase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YGR012W PE=1 SV=1
Length = 393
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 17 KKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITP 76
K+ +LIGNTP+V + ++ I AKLE+ P S KDR+A ++IK AEE G +
Sbjct: 46 KEGVEELIGNTPLVKIRSLTKATGVNIYAKLELCNPAGSAKDRVALNIIKTAEELGELVR 105
Query: 77 GK 78
G+
Sbjct: 106 GE 107
>sp|P0A1E3|CYSK_SALTY Cysteine synthase A OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=cysK PE=1 SV=2
Length = 323
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
I +D + IG+TP+V LN + +G RI AK+E P SVK RI +MI DAE++G++
Sbjct: 4 IYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLK 60
Query: 76 PG 77
PG
Sbjct: 61 PG 62
>sp|P0A1E4|CYSK_SALTI Cysteine synthase A OS=Salmonella typhi GN=cysK PE=3 SV=2
Length = 323
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
I +D + IG+TP+V LN + +G RI AK+E P SVK RI +MI DAE++G++
Sbjct: 4 IYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLK 60
Query: 76 PG 77
PG
Sbjct: 61 PG 62
>sp|P0ABK5|CYSK_ECOLI Cysteine synthase A OS=Escherichia coli (strain K12) GN=cysK PE=1
SV=2
Length = 323
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
I +D + IG+TP+V LN + +G RI AK+E P SVK RI +MI DAE++G++
Sbjct: 4 IFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLK 60
Query: 76 PG 77
PG
Sbjct: 61 PG 62
>sp|P0ABK6|CYSK_ECO57 Cysteine synthase A OS=Escherichia coli O157:H7 GN=cysK PE=3 SV=2
Length = 323
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75
I +D + IG+TP+V LN + +G RI AK+E P SVK RI +MI DAE++G++
Sbjct: 4 IFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLK 60
Query: 76 PG 77
PG
Sbjct: 61 PG 62
>sp|P29848|CYSM_SALTY Cysteine synthase B OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=cysM PE=1 SV=1
Length = 303
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 34/56 (60%)
Query: 22 QLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77
Q IGNTP+V L + + I KLE P SVKDR A SMI +AE++G I PG
Sbjct: 6 QTIGNTPLVKLQRLGPDNGSEIWVKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG 61
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,322,994
Number of Sequences: 539616
Number of extensions: 765442
Number of successful extensions: 1781
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1689
Number of HSP's gapped (non-prelim): 94
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)