Query 036442
Match_columns 78
No_of_seqs 101 out of 1080
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 21:59:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036442.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036442hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vc3_A Beta-cyanoalnine syntha 99.9 8.5E-22 2.9E-26 143.7 7.0 65 14-78 23-87 (344)
2 3dwg_A Cysteine synthase B; su 99.7 1.8E-18 6.1E-23 124.9 7.0 65 14-78 3-74 (325)
3 1z7w_A Cysteine synthase; tran 99.7 6.6E-18 2.3E-22 121.1 6.7 62 16-77 5-66 (322)
4 2q3b_A Cysteine synthase A; py 99.7 9.2E-18 3.1E-22 119.8 7.2 64 14-77 4-67 (313)
5 1y7l_A O-acetylserine sulfhydr 99.7 1.3E-17 4.5E-22 119.1 6.8 60 16-77 3-62 (316)
6 2egu_A Cysteine synthase; O-ac 99.7 1.7E-17 5.9E-22 118.2 7.1 62 16-77 4-65 (308)
7 2v03_A Cysteine synthase B; py 99.7 2E-17 7E-22 117.9 7.3 59 19-77 3-61 (303)
8 3tbh_A O-acetyl serine sulfhyd 99.7 1.6E-17 5.5E-22 120.4 6.9 63 15-78 10-72 (334)
9 1ve1_A O-acetylserine sulfhydr 99.7 2E-17 6.9E-22 117.6 7.2 60 19-78 2-61 (304)
10 2pqm_A Cysteine synthase; OASS 99.7 1.7E-17 5.7E-22 120.5 6.8 64 14-77 11-78 (343)
11 4aec_A Cysteine synthase, mito 99.7 2E-17 6.8E-22 124.8 6.5 66 12-77 109-174 (430)
12 3pc3_A CG1753, isoform A; CBS, 99.7 4.4E-17 1.5E-21 123.5 5.5 65 14-78 48-114 (527)
13 1jbq_A B, cystathionine beta-s 99.7 5.1E-17 1.8E-21 122.4 5.4 64 15-78 97-162 (435)
14 3l6b_A Serine racemase; pyrido 99.6 2.2E-16 7.5E-21 114.9 1.8 60 16-75 15-74 (346)
15 1o58_A O-acetylserine sulfhydr 99.6 1.6E-15 5.6E-20 108.0 5.7 55 19-77 13-67 (303)
16 3aey_A Threonine synthase; PLP 99.5 2.2E-15 7.5E-20 109.2 3.9 56 18-73 20-77 (351)
17 2d1f_A Threonine synthase; ami 99.5 1.5E-15 5.2E-20 110.6 2.5 56 18-73 30-85 (360)
18 2zsj_A Threonine synthase; PLP 99.5 1.8E-15 6.1E-20 109.7 2.3 56 18-73 22-79 (352)
19 1ve5_A Threonine deaminase; ri 99.5 3.4E-15 1.2E-19 106.2 3.1 54 16-69 10-63 (311)
20 1v8z_A Tryptophan synthase bet 99.5 5.9E-15 2E-19 107.7 3.9 58 16-73 39-98 (388)
21 2gn0_A Threonine dehydratase c 99.5 1.6E-15 5.4E-20 109.9 0.6 55 16-70 30-84 (342)
22 1v71_A Serine racemase, hypoth 99.5 2.1E-15 7.1E-20 108.1 0.4 53 17-69 17-69 (323)
23 3ss7_X D-serine dehydratase; t 99.5 1.1E-14 3.8E-19 109.2 4.0 55 24-78 76-144 (442)
24 1qop_B Tryptophan synthase bet 99.5 2.6E-14 8.9E-19 105.1 5.4 56 18-73 46-102 (396)
25 2rkb_A Serine dehydratase-like 99.5 1.1E-14 3.6E-19 104.1 2.7 50 23-72 4-53 (318)
26 4d9b_A D-cysteine desulfhydras 99.5 1.5E-14 5.1E-19 104.8 3.0 57 17-73 23-81 (342)
27 1p5j_A L-serine dehydratase; l 99.5 9E-15 3.1E-19 107.5 1.8 54 19-72 39-92 (372)
28 4h27_A L-serine dehydratase/L- 99.5 1.9E-14 6.7E-19 105.3 3.2 54 20-73 40-93 (364)
29 3iau_A Threonine deaminase; py 99.5 7.5E-15 2.6E-19 107.3 0.5 51 19-69 53-103 (366)
30 1f2d_A 1-aminocyclopropane-1-c 99.4 4.1E-14 1.4E-18 102.0 1.5 56 18-73 7-67 (341)
31 2o2e_A Tryptophan synthase bet 99.4 3.4E-13 1.1E-17 100.7 6.1 54 20-73 74-129 (422)
32 1tzj_A ACC deaminase, 1-aminoc 99.4 7.8E-14 2.7E-18 100.0 2.3 56 18-73 7-67 (338)
33 1tdj_A Biosynthetic threonine 99.4 7.8E-14 2.7E-18 107.2 1.5 53 19-71 24-76 (514)
34 1x1q_A Tryptophan synthase bet 99.4 2.5E-13 8.7E-18 100.9 3.4 52 21-72 71-124 (418)
35 1j0a_A 1-aminocyclopropane-1-c 99.3 3.2E-13 1.1E-17 96.8 2.3 57 17-73 12-70 (325)
36 4d9i_A Diaminopropionate ammon 99.3 5.8E-13 2E-17 98.2 2.9 48 22-69 40-89 (398)
37 1wkv_A Cysteine synthase; homo 99.3 8.5E-13 2.9E-17 98.0 3.4 58 17-77 84-145 (389)
38 1e5x_A Threonine synthase; thr 99.2 2.5E-12 8.4E-17 97.6 2.8 48 23-70 127-176 (486)
39 1kl7_A Threonine synthase; thr 99.1 6.1E-11 2.1E-15 91.0 5.6 45 23-72 93-143 (514)
40 4f4f_A Threonine synthase; str 98.8 8.1E-09 2.8E-13 78.5 5.2 41 26-73 93-137 (468)
41 3v7n_A Threonine synthase; ssg 98.6 3.4E-08 1.1E-12 75.7 5.2 43 27-72 103-149 (487)
42 1vb3_A Threonine synthase; PLP 98.6 3.7E-08 1.3E-12 73.4 4.4 33 25-65 82-115 (428)
43 1zcz_A Bifunctional purine bio 30.8 22 0.00074 27.3 1.7 19 51-72 433-451 (464)
44 4ehi_A Bifunctional purine bio 29.0 24 0.00082 27.5 1.7 20 51-73 503-522 (534)
45 3zzm_A Bifunctional purine bio 28.9 24 0.00083 27.4 1.7 20 51-73 492-511 (523)
46 2lso_A Histone H1X; structural 31.4 15 0.0005 21.4 0.0 17 42-58 60-76 (83)
47 1g8m_A Aicar transformylase-IM 20.1 38 0.0013 26.7 1.4 19 51-72 562-580 (593)
No 1
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=99.85 E-value=8.5e-22 Score=143.68 Aligned_cols=65 Identities=62% Similarity=0.958 Sum_probs=61.1
Q ss_pred cchhhhhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhCCCCCCC
Q 036442 14 RAIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPGK 78 (78)
Q Consensus 14 ~~~~~~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~l~pg~ 78 (78)
..|.++|.+.||+|||++++.+++..|++||+|+|++|||||||||+|.++|..|+++|.|+||.
T Consensus 23 ~~i~~~i~~lIG~TPLv~~~~Ls~~~G~~IylK~E~lnptGSfK~RgA~~~i~~a~~~g~l~~g~ 87 (344)
T 3vc3_A 23 TNIKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGK 87 (344)
T ss_dssp CSCBSSGGGGSCCCCEEECCSTTTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCCTTT
T ss_pred hhhhccHhhhcCCCceEECcccchhhCCEEEEEecCCCCCCCcHHHHHHHHHHHHHHcCCCCCCC
Confidence 45778899999999999999999989999999999999999999999999999999999999873
No 2
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=99.75 E-value=1.8e-18 Score=124.86 Aligned_cols=65 Identities=40% Similarity=0.508 Sum_probs=59.5
Q ss_pred cchhhhhhhccCCCceeeccCccCC-------CCceEEEEecCCCCCcchHHHHHHHHHHHHHHhCCCCCCC
Q 036442 14 RAIKKDATQLIGNTPMVYLNNVVDG-------CVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPGK 78 (78)
Q Consensus 14 ~~~~~~i~~~vg~TPLv~l~~l~~~-------~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~l~pg~ 78 (78)
|.+++++.+.+++|||++++.+++. .+.+||+|+|++|||||||||+|.+++.+|++.|.++||+
T Consensus 3 ~~~~~~i~~~ig~TPL~~~~~l~~~~~~~~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~l~~~~ 74 (325)
T 3dwg_A 3 MTRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGA 74 (325)
T ss_dssp CCEESSTGGGCSCCCEEECTTTSSBSSCBTTBCCEEEEEEETTSSTTSBTTHHHHHHHHHHHHHTTCCCTTC
T ss_pred cccccCHHHhcCCCCcEEccccchhhcccccCCCcEEEEEECCCCCCCChHHHHHHHHHHHHHHcCCCCCCC
Confidence 4577889999999999999998876 6789999999999999999999999999999999998864
No 3
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=99.72 E-value=6.6e-18 Score=121.11 Aligned_cols=62 Identities=79% Similarity=1.273 Sum_probs=57.4
Q ss_pred hhhhhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhCCCCCC
Q 036442 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77 (78)
Q Consensus 16 ~~~~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~l~pg 77 (78)
+++.+...+++|||++++.+++..+.+||+|+|++|||||||||+|.+++.+|+++|.++||
T Consensus 5 ~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~G~~~~~ 66 (322)
T 1z7w_A 5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPG 66 (322)
T ss_dssp CCSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTT
T ss_pred hhhHHHHhcCCCCeEECccccccCCceEEEEecccCCCCchHHHHHHHHHHHHHHcCCCCCC
Confidence 45678889999999999998877778999999999999999999999999999999999876
No 4
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=99.72 E-value=9.2e-18 Score=119.80 Aligned_cols=64 Identities=55% Similarity=0.821 Sum_probs=58.6
Q ss_pred cchhhhhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhCCCCCC
Q 036442 14 RAIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77 (78)
Q Consensus 14 ~~~~~~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~l~pg 77 (78)
+++++++...+++|||++++.+++..+.+||+|+|++||+||||||++.+++..|+++|.++||
T Consensus 4 ~~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g 67 (313)
T 2q3b_A 4 MSIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPD 67 (313)
T ss_dssp CCCCSSGGGGSCCCCEEECSSSCTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT
T ss_pred cchhhhHHHhcCCCceEECcccccccCcEEEEEehhcCCCCcHHHHHHHHHHHHHHHcCCCCCC
Confidence 3466788999999999999998877788999999999999999999999999999999998886
No 5
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=99.71 E-value=1.3e-17 Score=119.14 Aligned_cols=60 Identities=38% Similarity=0.525 Sum_probs=55.2
Q ss_pred hhhhhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhCCCCCC
Q 036442 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77 (78)
Q Consensus 16 ~~~~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~l~pg 77 (78)
+++++...+++|||++++.+ + .+.+||+|+|++|||||||||+|.+++..|+++|.++||
T Consensus 3 ~~~~i~~~~~~TPL~~l~~l-~-~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~~ 62 (316)
T 1y7l_A 3 IYADNSYSIGNTPLVRLKHF-G-HNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKG 62 (316)
T ss_dssp CCSSGGGGCCCCCEEECSSS-S-STTCEEEEETTSSGGGBTHHHHHHHHHHHHHHTTSSCTT
T ss_pred chhhhHHhcCCCCcEECccC-C-CCCEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCC
Confidence 45678889999999999988 6 778999999999999999999999999999999998875
No 6
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=99.71 E-value=1.7e-17 Score=118.15 Aligned_cols=62 Identities=50% Similarity=0.724 Sum_probs=57.4
Q ss_pred hhhhhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhCCCCCC
Q 036442 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77 (78)
Q Consensus 16 ~~~~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~l~pg 77 (78)
+++++...+++|||++++.+++..+.+||+|+|++||+||||||++.+++..|+++|.++||
T Consensus 4 ~~~~i~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g 65 (308)
T 2egu_A 4 TVNSITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLKPG 65 (308)
T ss_dssp CCSCGGGGSSCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT
T ss_pred HHHHHHHhcCCCCeEECCcccccCCCEEEEEecccCCCCChHHHHHHHHHHHHHHcCCCCCC
Confidence 46678889999999999998877788999999999999999999999999999999998876
No 7
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=99.71 E-value=2e-17 Score=117.88 Aligned_cols=59 Identities=46% Similarity=0.585 Sum_probs=55.0
Q ss_pred hhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhCCCCCC
Q 036442 19 DATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77 (78)
Q Consensus 19 ~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~l~pg 77 (78)
++...+++|||++++.+++..+.+||+|+|++|||||||||+|.+++.+|+++|.++||
T Consensus 3 ~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~g 61 (303)
T 2v03_A 3 TLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG 61 (303)
T ss_dssp SGGGGSSCCCEEECSSSSCSSSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT
T ss_pred chHhhcCCCCcEECcccccccCCEEEEEeccCCCCCCcHHHHHHHHHHHHHHcCCCCCC
Confidence 57788999999999999877788999999999999999999999999999999998876
No 8
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=99.70 E-value=1.6e-17 Score=120.36 Aligned_cols=63 Identities=40% Similarity=0.731 Sum_probs=57.6
Q ss_pred chhhhhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhCCCCCCC
Q 036442 15 AIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPGK 78 (78)
Q Consensus 15 ~~~~~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~l~pg~ 78 (78)
.+++++...+++|||++++.+ ...+++||+|+|++|||||||||+|.+++..|+++|.|+||+
T Consensus 10 ~~~~~i~~~ig~TPL~~l~~l-~~~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~l~~g~ 72 (334)
T 3tbh_A 10 NVAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGK 72 (334)
T ss_dssp SCCSSGGGGSSCCCEEECCTT-CCSSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTT
T ss_pred HHHHHHHHhcCCCCeEECCcc-cCCCCEEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCC
Confidence 455678889999999999988 777889999999999999999999999999999999998874
No 9
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=99.70 E-value=2e-17 Score=117.61 Aligned_cols=60 Identities=47% Similarity=0.690 Sum_probs=54.8
Q ss_pred hhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhCCCCCCC
Q 036442 19 DATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPGK 78 (78)
Q Consensus 19 ~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~l~pg~ 78 (78)
++.+.+++|||++++.+++..+.+||+|+|++|||||||||++.+++.+|+++|.++||+
T Consensus 2 ~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~g~ 61 (304)
T 1ve1_A 2 RVEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGS 61 (304)
T ss_dssp CGGGGCCCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTS
T ss_pred ChHHhcCCCCcEECcccccccCCEEEEEecccCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 366789999999999988777889999999999999999999999999999999988763
No 10
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=99.70 E-value=1.7e-17 Score=120.49 Aligned_cols=64 Identities=38% Similarity=0.622 Sum_probs=58.4
Q ss_pred cchhhhhhhccCCCceeeccCccC----CCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhCCCCCC
Q 036442 14 RAIKKDATQLIGNTPMVYLNNVVD----GCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77 (78)
Q Consensus 14 ~~~~~~i~~~vg~TPLv~l~~l~~----~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~l~pg 77 (78)
++.++++...+++|||++++.+++ ..+++||+|+|++|||||||||+|.+++..|++.|.++||
T Consensus 11 ~~~~~~i~~~~g~TPL~~~~~l~~~~~~~~g~~v~~K~E~~~ptGSfKdR~a~~~l~~a~~~g~~~~g 78 (343)
T 2pqm_A 11 KRIYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPG 78 (343)
T ss_dssp CCEESSGGGGSSCCCEEECCGGGCSTTSCTTCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTSSCTT
T ss_pred hhHHHHHHhhcCCCCeEECCccccccccccCcEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCC
Confidence 455678889999999999999877 6778999999999999999999999999999999998886
No 11
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=99.70 E-value=2e-17 Score=124.80 Aligned_cols=66 Identities=65% Similarity=1.145 Sum_probs=60.8
Q ss_pred cccchhhhhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhCCCCCC
Q 036442 12 HKRAIKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77 (78)
Q Consensus 12 ~~~~~~~~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~l~pg 77 (78)
..+.+++++...+++|||++++.+++..+++||+|+|++||+||||||+|.+++.+|+++|.++||
T Consensus 109 ~~~~~~~~i~~~ig~TPLv~l~~Ls~~~g~~I~lK~E~lnptGSfKdRgA~~~i~~A~~~G~l~~g 174 (430)
T 4aec_A 109 DGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPG 174 (430)
T ss_dssp SSCSCBSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTT
T ss_pred cccchhhhhhccCCCCCeEEChhhhhhcCCeEEEEECCCCCCCCHHHHHHHHHHHHHHHcCCCCCC
Confidence 345677889999999999999999888889999999999999999999999999999999999887
No 12
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.67 E-value=4.4e-17 Score=123.51 Aligned_cols=65 Identities=43% Similarity=0.685 Sum_probs=59.3
Q ss_pred cchhhhhhhccCCCceeeccCccCCCC--ceEEEEecCCCCCcchHHHHHHHHHHHHHHhCCCCCCC
Q 036442 14 RAIKKDATQLIGNTPMVYLNNVVDGCV--ARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPGK 78 (78)
Q Consensus 14 ~~~~~~i~~~vg~TPLv~l~~l~~~~~--~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~l~pg~ 78 (78)
+.+++++.+.+|+|||++++.+++..| ++||+|+|++||+||||||+|.+++..|+++|.++||+
T Consensus 48 ~~~~~~i~~~ig~TPl~~l~~l~~~~g~~~~i~~K~E~~~ptGS~K~R~a~~~i~~a~~~g~~~~g~ 114 (527)
T 3pc3_A 48 QQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPGY 114 (527)
T ss_dssp CSSCSSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHHTCCCTTC
T ss_pred hhHHhhHHhhcCCCCcEEcchhhhhcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHHHcCCCCCCC
Confidence 567788999999999999998876655 79999999999999999999999999999999998874
No 13
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=99.66 E-value=5.1e-17 Score=122.36 Aligned_cols=64 Identities=41% Similarity=0.594 Sum_probs=57.4
Q ss_pred chhhhhhhccCCCceeeccCccCCCC--ceEEEEecCCCCCcchHHHHHHHHHHHHHHhCCCCCCC
Q 036442 15 AIKKDATQLIGNTPMVYLNNVVDGCV--ARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPGK 78 (78)
Q Consensus 15 ~~~~~i~~~vg~TPLv~l~~l~~~~~--~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~l~pg~ 78 (78)
.+++++.+.+++|||++++.+++..| ++||+|+|++|||||||||+|.+++..|+++|.++||+
T Consensus 97 ~~~~~i~~~ig~TPLv~l~~Ls~~~G~~~~v~lK~E~~nptGSfKdR~a~~~i~~a~~~G~l~~g~ 162 (435)
T 1jbq_A 97 KILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGD 162 (435)
T ss_dssp SEESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTCSCTTC
T ss_pred hHHHHHHhhCCCCCeEECcchhhHhCCCceEEEEECCCCCcCCHHHHHHHHHHHHHHHcCCCCCCC
Confidence 45677889999999999998876655 68999999999999999999999999999999998863
No 14
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=99.59 E-value=2.2e-16 Score=114.88 Aligned_cols=60 Identities=17% Similarity=0.084 Sum_probs=49.9
Q ss_pred hhhhhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhCCCC
Q 036442 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLIT 75 (78)
Q Consensus 16 ~~~~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~l~ 75 (78)
.++.+.+.+++|||++++.+++..+++||+|+|++||+||||||+|.+++.+|.+.|.+.
T Consensus 15 a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~ 74 (346)
T 3l6b_A 15 AHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLVPDALER 74 (346)
T ss_dssp HHHHHGGGSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHTTC-----C
T ss_pred HHHHHhcccCCCCeEEchhhHHHhCCeEEEEeCCCCCCCCcHHHHHHHHHHHHHHhcccc
Confidence 346788899999999999887777889999999999999999999999999999887553
No 15
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=99.58 E-value=1.6e-15 Score=108.00 Aligned_cols=55 Identities=49% Similarity=0.666 Sum_probs=49.3
Q ss_pred hhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhCCCCCC
Q 036442 19 DATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGLITPG 77 (78)
Q Consensus 19 ~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~l~pg 77 (78)
-+...+++|||++++.++ .+||+|+|++|||||||||++.+++..|+++|.+++|
T Consensus 13 ~~~~~~~~TPL~~l~~l~----~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~~ 67 (303)
T 1o58_A 13 MMERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNG 67 (303)
T ss_dssp HHHHHSCCCCEEECTTTC----TTEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCTTC
T ss_pred hhhhccCCCCeEECccCC----ceEEEEecCCCCCCChHHHHHHHHHHHHHHcCCCCCC
Confidence 466778999999998775 6899999999999999999999999999999987664
No 16
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=99.55 E-value=2.2e-15 Score=109.18 Aligned_cols=56 Identities=30% Similarity=0.286 Sum_probs=50.4
Q ss_pred hhhhhccCCCceeec--cCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhCC
Q 036442 18 KDATQLIGNTPMVYL--NNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGL 73 (78)
Q Consensus 18 ~~i~~~vg~TPLv~l--~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~ 73 (78)
+.+...+|+|||+++ +.+++..+++||+|+|++||+||||||++.+++.+|++.|.
T Consensus 20 ~~v~~~~g~TPL~~~~~~~l~~~~g~~v~~K~E~~~ptgS~KdR~a~~~l~~a~~~g~ 77 (351)
T 3aey_A 20 PVISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGA 77 (351)
T ss_dssp CCCCSCCCCCCEEECCCCHHHHTTTCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC
T ss_pred CceecCCCCCCeeecCchhhHHHhCCeEEEEecCCCCcccHHHHHHHHHHHHHHhcCC
Confidence 356778999999999 88777778899999999999999999999999999998874
No 17
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=99.54 E-value=1.5e-15 Score=110.62 Aligned_cols=56 Identities=30% Similarity=0.340 Sum_probs=50.1
Q ss_pred hhhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhCC
Q 036442 18 KDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGL 73 (78)
Q Consensus 18 ~~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~ 73 (78)
..+...+|+|||++++.+++..+++||+|+|++||+||||||++.+++..|++.|.
T Consensus 30 ~~v~~~~g~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~l~~a~~~g~ 85 (360)
T 2d1f_A 30 TPVTLLEGGTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMAVTDALAHGQ 85 (360)
T ss_dssp CCCCCCCCCCCEEECHHHHHHHSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC
T ss_pred CccccccCCCCCeechhhHHHhCCeEEEEECCCCCCcCHHHHHHHHHHHHHHHCCC
Confidence 34677789999999998877677899999999999999999999999999998874
No 18
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=99.53 E-value=1.8e-15 Score=109.71 Aligned_cols=56 Identities=32% Similarity=0.303 Sum_probs=50.1
Q ss_pred hhhhhccCCCceeeccCccCCCCce--EEEEecCCCCCcchHHHHHHHHHHHHHHhCC
Q 036442 18 KDATQLIGNTPMVYLNNVVDGCVAR--IAAKLEMMEPCCSVKDRIAFSMIKDAEEKGL 73 (78)
Q Consensus 18 ~~i~~~vg~TPLv~l~~l~~~~~~~--v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~ 73 (78)
..+...+|+|||++++.+++..+++ ||+|+|++||+||||||++.+++.+|+++|.
T Consensus 22 ~~v~~~~g~TPL~~~~~l~~~~g~~~~i~~K~E~~~ptGS~KdR~a~~~l~~a~~~g~ 79 (352)
T 2zsj_A 22 PIVTLYEGNTPLIEADNLARAIGFKGKIYLKYEGLNPTGSFKDRGMTLAISKAVEAGK 79 (352)
T ss_dssp CCCCCCCCCCCEEECHHHHHHHTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC
T ss_pred CceecccCCCCCeehHHHHHHhCCCceEEEEECCCCCCccHHHHHHHHHHHHHHhcCC
Confidence 4567789999999999887666777 9999999999999999999999999998874
No 19
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=99.52 E-value=3.4e-15 Score=106.21 Aligned_cols=54 Identities=20% Similarity=0.090 Sum_probs=48.2
Q ss_pred hhhhhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHH
Q 036442 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAE 69 (78)
Q Consensus 16 ~~~~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~ 69 (78)
.++++...+++|||++++.+++..+.+||+|+|++|||||||||+|.+++.+++
T Consensus 10 a~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~i~~l~ 63 (311)
T 1ve5_A 10 AFRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALE 63 (311)
T ss_dssp HHHHHGGGSCCCCEEECHHHHHHTTSEEEEEEGGGSGGGBTHHHHHHHHHHHSS
T ss_pred HHHHHhccCCCCCceechhhHHhhCCeEEEEecCCCCcCCcHHHHHHHHHHHhc
Confidence 345678889999999999887767789999999999999999999999998875
No 20
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=99.51 E-value=5.9e-15 Score=107.67 Aligned_cols=58 Identities=21% Similarity=0.135 Sum_probs=49.7
Q ss_pred hhhhhhhccCC-CceeeccCccCCCC-ceEEEEecCCCCCcchHHHHHHHHHHHHHHhCC
Q 036442 16 IKKDATQLIGN-TPMVYLNNVVDGCV-ARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGL 73 (78)
Q Consensus 16 ~~~~i~~~vg~-TPLv~l~~l~~~~~-~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~ 73 (78)
+.+.+.+.+++ |||++++.+++..| ++||+|+|++|||||||||+|.+++..|++.|.
T Consensus 39 ~~~~~~~~ig~~TPL~~~~~l~~~~g~~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~ 98 (388)
T 1v8z_A 39 LNYYLKTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGK 98 (388)
T ss_dssp HHHHHHHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCCCceehHhhHhhcCCceEEEEeccCCCCCCHHHHHHHHHHHHHHHcCC
Confidence 34456678887 99999998877665 799999999999999999999999999988773
No 21
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=99.51 E-value=1.6e-15 Score=109.89 Aligned_cols=55 Identities=31% Similarity=0.256 Sum_probs=48.5
Q ss_pred hhhhhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHH
Q 036442 16 IKKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEE 70 (78)
Q Consensus 16 ~~~~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~ 70 (78)
..+.+.+.+++|||++++.+++..+++||+|+|++|||||||||++.+++.+|.+
T Consensus 30 a~~~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdR~a~~~i~~a~~ 84 (342)
T 2gn0_A 30 AKKRLAGKIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTE 84 (342)
T ss_dssp HHHHHTTTSCCCCCCBCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHHSCH
T ss_pred HHHHHhhhcCCCCceEchhhHHHhCCEEEEEEccCCCcCChHHHHHHHHHHHHHH
Confidence 3456788899999999998877677899999999999999999999999998853
No 22
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=99.50 E-value=2.1e-15 Score=108.14 Aligned_cols=53 Identities=19% Similarity=0.197 Sum_probs=46.7
Q ss_pred hhhhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHH
Q 036442 17 KKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAE 69 (78)
Q Consensus 17 ~~~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~ 69 (78)
++.+.+.+++|||++++.+++..+++||+|+|++||+||||||+|.+++.+++
T Consensus 17 ~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGS~KdRga~~~i~~~~ 69 (323)
T 1v71_A 17 SERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLN 69 (323)
T ss_dssp HHHHTTTSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHTTCC
T ss_pred HHHHhccCCCCCceEhHhhHHHhCCeEEEEecCCCCcCCHHHHHHHHHHHHHH
Confidence 45677889999999999887666789999999999999999999999997654
No 23
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=99.49 E-value=1.1e-14 Score=109.19 Aligned_cols=55 Identities=22% Similarity=0.216 Sum_probs=47.7
Q ss_pred cCCCceeeccCcc----CCC----CceEEEEecCCCC-CcchHHHHHHHHHHH-----HHHhCCCCCCC
Q 036442 24 IGNTPMVYLNNVV----DGC----VARIAAKLEMMEP-CCSVKDRIAFSMIKD-----AEEKGLITPGK 78 (78)
Q Consensus 24 vg~TPLv~l~~l~----~~~----~~~v~~KlE~~NP-tGS~KdR~A~~~i~~-----A~~~G~l~pg~ 78 (78)
+++|||++++.++ +.. +++||+|+|++|| |||||||+|.++|.. |+++|.++||.
T Consensus 76 ~~~TPL~~~~~l~~~l~~~~g~~~~~~v~lK~E~~~p~tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~ 144 (442)
T 3ss7_X 76 IIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDD 144 (442)
T ss_dssp CCCCCEEECHHHHHHHHHHHTCCCCSEEEEEEGGGCTTTSBTHHHHHHHHHHHHHHHHHHHTTSCCTTS
T ss_pred CCCCCcEEhHhhhhHHHHhhCCCcCCeEEEeecCCCCCCCCcHHHHHHHHHHHHhHHHHHHcCCCCCCc
Confidence 4699999998875 433 4799999999999 999999999999986 89999998863
No 24
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=99.48 E-value=2.6e-14 Score=105.09 Aligned_cols=56 Identities=16% Similarity=0.087 Sum_probs=49.4
Q ss_pred hhhhhccCC-CceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhCC
Q 036442 18 KDATQLIGN-TPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGL 73 (78)
Q Consensus 18 ~~i~~~vg~-TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~ 73 (78)
..+.+.+|+ |||++++.+++..|++||+|+|++|||||||||+|..++..|++.|.
T Consensus 46 ~~~~~~ig~~TPL~~~~~l~~~~g~~i~lK~E~l~ptGSfK~R~a~~~~~~a~~~g~ 102 (396)
T 1qop_B 46 DLLKNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGK 102 (396)
T ss_dssp HHHHHTTCCSCCEEECHHHHTTSSEEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhCCCCCCcEEhhhhhhccCCeEEEEeccCCCCCcHHHHHHHHHHHHHHHcCc
Confidence 345567876 99999998888778899999999999999999999999999988774
No 25
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=99.48 E-value=1.1e-14 Score=104.12 Aligned_cols=50 Identities=20% Similarity=0.114 Sum_probs=45.7
Q ss_pred ccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhC
Q 036442 23 LIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKG 72 (78)
Q Consensus 23 ~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G 72 (78)
.+++|||++++.+++..+.+||+|+|++||+||||||++.+++.+|.++|
T Consensus 4 ~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptgS~K~R~a~~~l~~a~~~g 53 (318)
T 2rkb_A 4 FHVVTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMAKKG 53 (318)
T ss_dssp SSCCCCEEEEHHHHHHHTSCEEEEEGGGSTTSBTTHHHHHHHHHHHHHTT
T ss_pred CCccCCceehHhhHHHhCCeEEEEecCCCCCCCHHHHHHHHHHHHHHHcC
Confidence 46899999999887666789999999999999999999999999999876
No 26
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=99.47 E-value=1.5e-14 Score=104.76 Aligned_cols=57 Identities=23% Similarity=0.150 Sum_probs=51.3
Q ss_pred hhhhhhccCCCceeeccCccCCCCceEEEEecCCCC--CcchHHHHHHHHHHHHHHhCC
Q 036442 17 KKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEP--CCSVKDRIAFSMIKDAEEKGL 73 (78)
Q Consensus 17 ~~~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NP--tGS~KdR~A~~~i~~A~~~G~ 73 (78)
.+.+...+++|||++++.+++..+++||+|+|++|| +||||||.+.+++.+|+++|.
T Consensus 23 ~~ri~~~~~~TPL~~~~~l~~~~g~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~ 81 (342)
T 4d9b_A 23 FPRLEFIGAPTPLEYLPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGA 81 (342)
T ss_dssp SCCCCSSCSCCCEEECHHHHHHHTSCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTC
T ss_pred CCcccccCCCCceeEhhhhHHhhCCEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCC
Confidence 346778899999999998877668899999999999 999999999999999999884
No 27
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=99.47 E-value=9e-15 Score=107.47 Aligned_cols=54 Identities=19% Similarity=0.108 Sum_probs=47.9
Q ss_pred hhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhC
Q 036442 19 DATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKG 72 (78)
Q Consensus 19 ~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G 72 (78)
.+...+++|||++++.+++..+++||+|+|++||+||||||+|.++|.+|.++|
T Consensus 39 ~~~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdRga~~~l~~a~~~g 92 (372)
T 1p5j_A 39 SGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQG 92 (372)
T ss_dssp -CCCSSCCCCEEEEHHHHHHHTSCEEEECGGGSGGGBTTHHHHHHHHHHHHHTT
T ss_pred cccCCCCCCCceEcHhhHHHhCCEEEEEEcCCCCCCChHHHHHHHHHHHHHHcC
Confidence 345678999999999887666789999999999999999999999999998876
No 28
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=99.46 E-value=1.9e-14 Score=105.30 Aligned_cols=54 Identities=19% Similarity=0.096 Sum_probs=48.2
Q ss_pred hhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHhCC
Q 036442 20 ATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGL 73 (78)
Q Consensus 20 i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~ 73 (78)
....+++|||++++.+++..+++||+|+|++||+||||||++.+++..|.+.|.
T Consensus 40 ~~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~ 93 (364)
T 4h27_A 40 GEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC 93 (364)
T ss_dssp -CCSSCCCCEEEEHHHHHHHTSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC
T ss_pred cCCCCCcCCeEEChhhHHHhCCEEEEEeCCCCCCCCHHHHHHHHHHHHHHhcCC
Confidence 345678999999998887778899999999999999999999999999998774
No 29
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=99.45 E-value=7.5e-15 Score=107.32 Aligned_cols=51 Identities=18% Similarity=0.151 Sum_probs=45.8
Q ss_pred hhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHH
Q 036442 19 DATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAE 69 (78)
Q Consensus 19 ~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~ 69 (78)
++.+.+++|||++++.+++..|.+||+|+|++|||||||||+|.+++.++.
T Consensus 53 ~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfKdRga~~~i~~l~ 103 (366)
T 3iau_A 53 PVYDVAIESPLELAEKLSDRLGVNFYIKREDKQRVFSFKLRGAYNMMSNLS 103 (366)
T ss_dssp CGGGTCCCCCEEECHHHHHHHTSEEEEEEGGGSTTSBTTHHHHHHHHHTSC
T ss_pred HHhhhcCCCCcEEhhhhhHhhCCEEEEEecCCCCCcchHHHHHHHHHHHHH
Confidence 456788999999999988777889999999999999999999999998764
No 30
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=99.40 E-value=4.1e-14 Score=102.04 Aligned_cols=56 Identities=20% Similarity=0.124 Sum_probs=50.2
Q ss_pred hhhhhccCCCceeeccCccCCC-C-ceEEEEecCCC-C--CcchHHHHHHHHHHHHHHhCC
Q 036442 18 KDATQLIGNTPMVYLNNVVDGC-V-ARIAAKLEMME-P--CCSVKDRIAFSMIKDAEEKGL 73 (78)
Q Consensus 18 ~~i~~~vg~TPLv~l~~l~~~~-~-~~v~~KlE~~N-P--tGS~KdR~A~~~i~~A~~~G~ 73 (78)
+.+...+++|||++++.+++.. + .+||+|+|++| | +||||||++.++|.+|++.|.
T Consensus 7 ~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~Gs~K~R~a~~~l~~a~~~g~ 67 (341)
T 1f2d_A 7 AKYPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDY 67 (341)
T ss_dssp CCCCCSSSSCCEEECHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCC
T ss_pred CCcccCCCCCcceeHHhHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC
Confidence 4567788999999999887766 7 89999999999 9 999999999999999998874
No 31
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=99.40 E-value=3.4e-13 Score=100.68 Aligned_cols=54 Identities=20% Similarity=0.138 Sum_probs=47.1
Q ss_pred hhhccCC-CceeeccCccCCC-CceEEEEecCCCCCcchHHHHHHHHHHHHHHhCC
Q 036442 20 ATQLIGN-TPMVYLNNVVDGC-VARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKGL 73 (78)
Q Consensus 20 i~~~vg~-TPLv~l~~l~~~~-~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G~ 73 (78)
+.+.+|+ |||++++.+++.. +++||+|+|++|||||||||++..++..|++.|.
T Consensus 74 ~~~~~g~~TPL~~~~~Ls~~~gg~~i~lK~E~lnptGSfK~R~a~~~~~~a~~~g~ 129 (422)
T 2o2e_A 74 QANYAGRPSPLYEATRLSQHAGSARIFLKREDLNHTGSHKINNVLGQALLARRMGK 129 (422)
T ss_dssp TTTTSSCSCCEEECGGGGGGTTTCEEEEECGGGCCSSTTHHHHHHHHHHHHHHTTC
T ss_pred HHHhCCCCCCeEEChhhHhhcCCCeEEEEEcCCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 3556666 9999999998777 4799999999999999999999999999988773
No 32
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=99.39 E-value=7.8e-14 Score=100.00 Aligned_cols=56 Identities=21% Similarity=0.126 Sum_probs=50.0
Q ss_pred hhhhhccCCCceeeccCccCCC-C-ceEEEEecCCC-C--CcchHHHHHHHHHHHHHHhCC
Q 036442 18 KDATQLIGNTPMVYLNNVVDGC-V-ARIAAKLEMME-P--CCSVKDRIAFSMIKDAEEKGL 73 (78)
Q Consensus 18 ~~i~~~vg~TPLv~l~~l~~~~-~-~~v~~KlE~~N-P--tGS~KdR~A~~~i~~A~~~G~ 73 (78)
+.+...+++|||++++.+++.. + .+||+|+|++| | +||||||++.+++.+|+++|.
T Consensus 7 ~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~gs~K~R~a~~~l~~a~~~g~ 67 (338)
T 1tzj_A 7 PRYPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGC 67 (338)
T ss_dssp CCCCCSSSSCCEEECHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHTTHHHHHHTTC
T ss_pred CccccCCCCCccEEHHHHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC
Confidence 4577789999999999887666 6 79999999997 8 999999999999999998874
No 33
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=99.37 E-value=7.8e-14 Score=107.24 Aligned_cols=53 Identities=23% Similarity=0.206 Sum_probs=47.6
Q ss_pred hhhhccCCCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHHHHHHHHh
Q 036442 19 DATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSMIKDAEEK 71 (78)
Q Consensus 19 ~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~ 71 (78)
.+.+.+++|||++++.+++..|++||+|+|++||+||||||+|.+++..+.++
T Consensus 24 ~i~~~i~~TPL~~l~~Ls~~~g~~V~lK~E~lqPtgSfKdRgA~n~i~~l~~~ 76 (514)
T 1tdj_A 24 PVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEE 76 (514)
T ss_dssp CGGGTCCCCCEEECHHHHHHTTSEEEEECGGGSTTSSSTHHHHHHHHHTTTTS
T ss_pred hHhcccCCCCcEEchhhHHhhCCeEEEEECCCCCcccHHHHHHHHHHHHHHHh
Confidence 46778899999999988877788999999999999999999999999988654
No 34
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=99.36 E-value=2.5e-13 Score=100.91 Aligned_cols=52 Identities=19% Similarity=0.107 Sum_probs=45.5
Q ss_pred hhccCC-CceeeccCccCCC-CceEEEEecCCCCCcchHHHHHHHHHHHHHHhC
Q 036442 21 TQLIGN-TPMVYLNNVVDGC-VARIAAKLEMMEPCCSVKDRIAFSMIKDAEEKG 72 (78)
Q Consensus 21 ~~~vg~-TPLv~l~~l~~~~-~~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~~G 72 (78)
.+.+++ |||++++.+++.. +++||+|+|++|||||||||+|..++..|.+.|
T Consensus 71 ~~~ig~~TPL~~~~~Ls~~~gg~~i~lK~E~l~ptGSfK~R~a~~~i~~a~~~g 124 (418)
T 1x1q_A 71 RQFAGRPTPLYHAKRLSEYWGGAQVFLKREDLLHTGAHKINNTLGQALLARRMG 124 (418)
T ss_dssp HHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSGGGBTTHHHHHHHHHHHHHHT
T ss_pred hcccCCCCCcEEhHHhHhhcCCceEEEEEccCCcCccHHHHHHHHHHHHHHHcC
Confidence 356765 9999999887766 579999999999999999999999999888776
No 35
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=99.33 E-value=3.2e-13 Score=96.76 Aligned_cols=57 Identities=23% Similarity=0.151 Sum_probs=51.0
Q ss_pred hhhhhhccCCCceeeccCccCCCCceEEEEecCCCC--CcchHHHHHHHHHHHHHHhCC
Q 036442 17 KKDATQLIGNTPMVYLNNVVDGCVARIAAKLEMMEP--CCSVKDRIAFSMIKDAEEKGL 73 (78)
Q Consensus 17 ~~~i~~~vg~TPLv~l~~l~~~~~~~v~~KlE~~NP--tGS~KdR~A~~~i~~A~~~G~ 73 (78)
++.+...+++|||++++.+++..+++||+|+|++|| +||+|||.+.+++.+|+++|.
T Consensus 12 ~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~p~~~gs~K~R~~~~~i~~a~~~G~ 70 (325)
T 1j0a_A 12 FPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGA 70 (325)
T ss_dssp CCCCCCCCSCCCEEECHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHHHHHHHHTTC
T ss_pred CCCcccccCCCCceEhhhhhhhhCCEEEEEecccCCCCCCchHHHHHHHHHHHHHHcCC
Confidence 445777899999999998876667899999999999 999999999999999999983
No 36
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=99.31 E-value=5.8e-13 Score=98.21 Aligned_cols=48 Identities=15% Similarity=-0.031 Sum_probs=43.2
Q ss_pred hccCCCceeeccCccCCCC-ceEEEEecCCC-CCcchHHHHHHHHHHHHH
Q 036442 22 QLIGNTPMVYLNNVVDGCV-ARIAAKLEMME-PCCSVKDRIAFSMIKDAE 69 (78)
Q Consensus 22 ~~vg~TPLv~l~~l~~~~~-~~v~~KlE~~N-PtGS~KdR~A~~~i~~A~ 69 (78)
..+++|||++++.+++..| .+||+|+|++| |+||||||+|.+++.++.
T Consensus 40 ~~~~~TPL~~~~~l~~~~g~~~i~~K~E~~~~ptgSfK~Rga~~~i~~~~ 89 (398)
T 4d9i_A 40 AGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFXMLGGAYAIAQLL 89 (398)
T ss_dssp TTCCCCCEEECHHHHHHHTSSEEEEEEGGGSTTTTBSTHHHHHHHHHHHH
T ss_pred CCCCCCCceehHHHHHHhCCCcEEEEECCCCCCCCcchhhhhHHHHHHHH
Confidence 3478999999998887777 59999999999 999999999999999984
No 37
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=99.30 E-value=8.5e-13 Score=98.01 Aligned_cols=58 Identities=28% Similarity=0.307 Sum_probs=46.3
Q ss_pred hhhhhhcc---CCCceeeccCccCCCCceEEEEecCCCC-CcchHHHHHHHHHHHHHHhCCCCCC
Q 036442 17 KKDATQLI---GNTPMVYLNNVVDGCVARIAAKLEMMEP-CCSVKDRIAFSMIKDAEEKGLITPG 77 (78)
Q Consensus 17 ~~~i~~~v---g~TPLv~l~~l~~~~~~~v~~KlE~~NP-tGS~KdR~A~~~i~~A~~~G~l~pg 77 (78)
++++.+.+ ..|||++++++++. +++||+|+|++|| |||||||++.+++..++ |.+++|
T Consensus 84 ~~~~~~~~g~~~~TPL~~l~~Ls~~-g~~IylK~E~lnp~tGS~K~R~a~~~i~~l~--~a~~~g 145 (389)
T 1wkv_A 84 FPSPLDFFERGKPTPLVRSRLQLPN-GVRVWLKLEWYNPFSLSVKDRPAVEIISRLS--RRVEKG 145 (389)
T ss_dssp ESSHHHHHHHSCSCCEEECCCCCST-TEEEEEEEGGGSTTTSBTTHHHHHHHHHHHT--TTSCTT
T ss_pred HHHHHHHhCCCCCCCeEEccccccC-CCeEEEEEcCCCCCcCChHHHHHHHHHHHHH--HHHhcC
Confidence 44444444 46999999988765 7899999999999 99999999999999955 444443
No 38
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=99.24 E-value=2.5e-12 Score=97.65 Aligned_cols=48 Identities=13% Similarity=0.067 Sum_probs=40.9
Q ss_pred ccCCCceeeccCccCC-CC-ceEEEEecCCCCCcchHHHHHHHHHHHHHH
Q 036442 23 LIGNTPMVYLNNVVDG-CV-ARIAAKLEMMEPCCSVKDRIAFSMIKDAEE 70 (78)
Q Consensus 23 ~vg~TPLv~l~~l~~~-~~-~~v~~KlE~~NPtGS~KdR~A~~~i~~A~~ 70 (78)
.+|+|||++++.+++. .| .+||+|+|++|||||||||++..++..+.+
T Consensus 127 ~~g~TPLv~l~~L~~~~lg~~~l~~K~E~~nPTGSFKDRga~~~~~~l~~ 176 (486)
T 1e5x_A 127 FEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNR 176 (486)
T ss_dssp CCCCCCEEECHHHHHHHHCCSSEEEEETTSSTTSBTTHHHHHHHHHHHHH
T ss_pred cCCCCCcEECcccchhhcCCCcEEEeeccCCCccCHHHHHHHHHHHHHHH
Confidence 4789999999987765 56 489999999999999999999888776654
No 39
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=99.12 E-value=6.1e-11 Score=91.00 Aligned_cols=45 Identities=13% Similarity=0.015 Sum_probs=36.7
Q ss_pred ccCCCceee--ccCccCCCCceEEEEecCCCCCcchHHHHHHHH---HHHHH-HhC
Q 036442 23 LIGNTPMVY--LNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSM---IKDAE-EKG 72 (78)
Q Consensus 23 ~vg~TPLv~--l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~---i~~A~-~~G 72 (78)
..+.|||++ ++.+ .++|+|+|++|||||||||++..+ +..++ ++|
T Consensus 93 ~~g~TPLv~~~l~~l-----~~l~~K~e~~nPTgSFKDrga~~~~~~~~~a~~~~g 143 (514)
T 1kl7_A 93 SDEVTPLVQNVTGDK-----ENLHILELFHGPTYAFKDVALQFVGNLFEYFLQRTN 143 (514)
T ss_dssp STTSSCEECCTTCSS-----SCEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceeehhcccc-----cchhhhhhccCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 367899999 7654 479999999999999999999998 44553 455
No 40
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=98.75 E-value=8.1e-09 Score=78.54 Aligned_cols=41 Identities=15% Similarity=0.101 Sum_probs=33.8
Q ss_pred CCceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHH---HHHHH-HhCC
Q 036442 26 NTPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSM---IKDAE-EKGL 73 (78)
Q Consensus 26 ~TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~---i~~A~-~~G~ 73 (78)
-|||+++.. ++|+|.|++|||||||||++..+ +..+. ++|.
T Consensus 93 ~~pl~~l~~-------~~~~kee~~~PTgSFKDRga~~~~~~l~~a~~~~g~ 137 (468)
T 4f4f_A 93 VCPLVQTDA-------NEFVLELFHGPTLAFKDVAMQLLARMMDYVLAQRGE 137 (468)
T ss_dssp SSCEEEEET-------TEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCceEEecC-------CeehHHhccCCcccHHHHHHHHHHHHHHHHHHhcCC
Confidence 389988642 59999999999999999999998 77774 5553
No 41
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=98.62 E-value=3.4e-08 Score=75.66 Aligned_cols=43 Identities=19% Similarity=0.130 Sum_probs=33.6
Q ss_pred CceeeccCccCCCCceEEEEecCCCCCcchHHHHHHHH---HHHHH-HhC
Q 036442 27 TPMVYLNNVVDGCVARIAAKLEMMEPCCSVKDRIAFSM---IKDAE-EKG 72 (78)
Q Consensus 27 TPLv~l~~l~~~~~~~v~~KlE~~NPtGS~KdR~A~~~---i~~A~-~~G 72 (78)
|||+++..- -+.++|+|.|++|||||||||++..+ +..+. ++|
T Consensus 103 ~Pl~~l~~~---~~~~l~vkee~~~PTgSFKDRga~~~~~ll~~a~~~~g 149 (487)
T 3v7n_A 103 TPLTTLGTE---NGAPVSLLELSNGPTLAFKDMAMQLLGNLFEYTLAKHG 149 (487)
T ss_dssp SCEEEEEEE---TTEEEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHTTT
T ss_pred ceeEEecCC---CCcceeHHhhccCCcCcHHHHHHHHHHHHHHHHHHhcC
Confidence 789887521 01249999999999999999999998 88885 444
No 42
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=98.58 E-value=3.7e-08 Score=73.42 Aligned_cols=33 Identities=21% Similarity=0.264 Sum_probs=28.7
Q ss_pred CCCceeeccCccCCCCceEEEEecCC-CCCcchHHHHHHHHH
Q 036442 25 GNTPMVYLNNVVDGCVARIAAKLEMM-EPCCSVKDRIAFSMI 65 (78)
Q Consensus 25 g~TPLv~l~~l~~~~~~~v~~KlE~~-NPtGS~KdR~A~~~i 65 (78)
++|||++++. +||+ +|.+ |||||||||++..++
T Consensus 82 ~~TPL~~l~~-------~i~~-~E~~~~pTgSfKdr~a~~l~ 115 (428)
T 1vb3_A 82 FPAPVANVES-------DVGC-LELFHGPTLAFKDFGGRFMA 115 (428)
T ss_dssp SCCCEEEEET-------TEEE-EECCCSTTSBTHHHHHHHHH
T ss_pred CCCCeEEecC-------CeEE-eeccCCCcccHHHHHHHHHH
Confidence 6899999863 6999 7888 699999999999884
No 43
>1zcz_A Bifunctional purine biosynthesis protein PURH; TM1249; HET: PG4; 1.88A {Thermotoga maritima} SCOP: c.24.1.3 c.97.1.4
Probab=30.81 E-value=22 Score=27.28 Aligned_cols=19 Identities=37% Similarity=0.625 Sum_probs=15.0
Q ss_pred CCCcchHHHHHHHHHHHHHHhC
Q 036442 51 EPCCSVKDRIAFSMIKDAEEKG 72 (78)
Q Consensus 51 NPtGS~KdR~A~~~i~~A~~~G 72 (78)
||+||++|- ..|+.|-|.|
T Consensus 433 QPGGSiRD~---evI~aane~g 451 (464)
T 1zcz_A 433 APLGSIRDE---EVIEKARELG 451 (464)
T ss_dssp ECCCCTTHH---HHHHHHHHHT
T ss_pred cCCCCcCcH---HHHHHHHHcC
Confidence 899999998 5667776665
No 44
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=29.01 E-value=24 Score=27.48 Aligned_cols=20 Identities=40% Similarity=0.724 Sum_probs=15.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhCC
Q 036442 51 EPCCSVKDRIAFSMIKDAEEKGL 73 (78)
Q Consensus 51 NPtGS~KdR~A~~~i~~A~~~G~ 73 (78)
||+||++|- ..|+.|-+.|.
T Consensus 503 QPGGSiRD~---evI~aane~gi 522 (534)
T 4ehi_A 503 EPGGSIRDD---EVVKAADEYGM 522 (534)
T ss_dssp ECCCCTTHH---HHHHHHHHHTC
T ss_pred CCCCCCccH---HHHHHHHHcCC
Confidence 899999998 55777777653
No 45
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=28.88 E-value=24 Score=27.38 Aligned_cols=20 Identities=30% Similarity=0.519 Sum_probs=15.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhCC
Q 036442 51 EPCCSVKDRIAFSMIKDAEEKGL 73 (78)
Q Consensus 51 NPtGS~KdR~A~~~i~~A~~~G~ 73 (78)
||+||++|- ..|+.|-+.|.
T Consensus 492 QPGGSiRD~---evI~aane~gi 511 (523)
T 3zzm_A 492 HPGGSVRDE---EVTEAAAKAGV 511 (523)
T ss_dssp ECCCCTTHH---HHHHHHHHHTC
T ss_pred CCCCCCCcH---HHHHHHHHcCC
Confidence 899999998 66777777653
No 46
>2lso_A Histone H1X; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, nuclear protein; NMR {Homo sapiens}
Probab=31.44 E-value=15 Score=21.36 Aligned_cols=17 Identities=12% Similarity=-0.109 Sum_probs=11.6
Q ss_pred eEEEEecCCCCCcchHH
Q 036442 42 RIAAKLEMMEPCCSVKD 58 (78)
Q Consensus 42 ~v~~KlE~~NPtGS~Kd 58 (78)
..+++.=+.-++||||.
T Consensus 60 G~Lvq~Kg~GasGsfKl 76 (83)
T 2lso_A 60 DTLLQVKGTGANGSFKL 76 (83)
Confidence 45556656667889985
No 47
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=20.09 E-value=38 Score=26.68 Aligned_cols=19 Identities=32% Similarity=0.487 Sum_probs=15.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhC
Q 036442 51 EPCCSVKDRIAFSMIKDAEEKG 72 (78)
Q Consensus 51 NPtGS~KdR~A~~~i~~A~~~G 72 (78)
||+||++|- ..|..|-+.|
T Consensus 562 QPGGSiRD~---evI~aane~g 580 (593)
T 1g8m_A 562 APSGSAADE---VVIEACNELG 580 (593)
T ss_dssp EECCCTTHH---HHHHHHHHHT
T ss_pred CCCCCcCCH---HHHHHHHHcC
Confidence 899999998 5666776665
Done!