BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036447
         (338 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3VLA|A Chain A, Crystal Structure Of Edgp
          Length = 413

 Score =  371 bits (953), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/318 (61%), Positives = 246/318 (77%), Gaps = 7/318 (2%)

Query: 25  NNPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGL 84
            NP+ NT T G++  DV+S++ST+G + GR VTVP FIF C    +LQ LA+GVVG+AGL
Sbjct: 98  ENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGL 157

Query: 85  GRSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVIIFGDGPYVLSPNVDVS-KSLTYTP 143
           GR+++ALP Q A+AFSF RKFA+CLS +   +N VIIFG+ PY   PN+ VS K+LTYTP
Sbjct: 158 GRTRIALPSQFASAFSFKRKFAMCLSGS-TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTP 216

Query: 144 LFINPVNTE-SGFLGDPSVEYFIGVKSIRVSDKAIPLNTTLLSIDSEGFGGTKISTVNPY 202
           L  NPV+T  +   G+PSVEYFIGVKSI+++ K + LNT+LLSI S G GGTKIST+NPY
Sbjct: 217 LLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPY 276

Query: 203 TVLETSIYNALVQAFV--NAMPNVTRVAPVAPLGACFKSSDIVSSRFGPSVPPIDLVLQN 260
           TVLETSIY A+ +AF+  +A  N+TRVA VAP GACF + +I+S+R GPSVP IDLVLQ+
Sbjct: 277 TVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQS 336

Query: 261 -NVSWSIIGANSIVRVNNNDVSCLGFVDGGVRPMTSIVIGGHQLENNLLQFDLPSSRLGF 319
            +V W+I G+NS+V +N+N V CLG VDGG    TSIVIGGHQLE+NL+QFDL +SR+GF
Sbjct: 337 ESVVWTITGSNSMVYINDN-VVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGF 395

Query: 320 SNSLLFQRTVCDNFNFTS 337
           S +LL  RT C NFNFTS
Sbjct: 396 SGTLLGSRTTCANFNFTS 413


>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp
 pdb|3VLB|C Chain C, Crystal Structure Of Xeg-Edgp
          Length = 413

 Score =  371 bits (952), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/318 (61%), Positives = 246/318 (77%), Gaps = 7/318 (2%)

Query: 25  NNPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGL 84
            NP+ NT T G++  DV+S++ST+G + GR VTVP FIF C    +LQ LA+GVVG+AGL
Sbjct: 98  ENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGL 157

Query: 85  GRSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVIIFGDGPYVLSPNVDVS-KSLTYTP 143
           GR+++ALP Q A+AFSF RKFA+CLS +   +N VIIFG+ PY   PN+ VS K+LTYTP
Sbjct: 158 GRTRIALPSQFASAFSFKRKFAMCLSGS-TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTP 216

Query: 144 LFINPVNTE-SGFLGDPSVEYFIGVKSIRVSDKAIPLNTTLLSIDSEGFGGTKISTVNPY 202
           L  NPV+T  +   G+PSVEYFIGVKSI+++ K + LNT+LLSI S G GGTKIST+NPY
Sbjct: 217 LLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPY 276

Query: 203 TVLETSIYNALVQAFV--NAMPNVTRVAPVAPLGACFKSSDIVSSRFGPSVPPIDLVLQN 260
           TVLETSIY A+ +AF+  +A  N+TRVA VAP GACF + +I+S+R GPSVP IDLVLQ+
Sbjct: 277 TVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQS 336

Query: 261 -NVSWSIIGANSIVRVNNNDVSCLGFVDGGVRPMTSIVIGGHQLENNLLQFDLPSSRLGF 319
            +V W+I G+NS+V +N+N V CLG VDGG    TSIVIGGHQLE+NL+QFDL +SR+GF
Sbjct: 337 ESVVWTITGSNSMVYINDN-VVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGF 395

Query: 320 SNSLLFQRTVCDNFNFTS 337
           S +LL  RT C NFNFTS
Sbjct: 396 SGTLLGSRTTCANFNFTS 413


>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean
 pdb|3AUP|B Chain B, Crystal Structure Of Basic 7s Globulin From Soybean
 pdb|3AUP|C Chain C, Crystal Structure Of Basic 7s Globulin From Soybean
 pdb|3AUP|D Chain D, Crystal Structure Of Basic 7s Globulin From Soybean
          Length = 403

 Score =  197 bits (502), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 134/358 (37%), Positives = 181/358 (50%), Gaps = 40/358 (11%)

Query: 2   CGSAQCNLANAKXXXXXXXXX-----------XVNNPISNTGTSGDIRIDVLSIQSTNGG 50
           C S QC+ AN                         NPI+     G++  DVL+I +T G 
Sbjct: 65  CHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGS 124

Query: 51  NP--GRAVTVPNFIFLCGSEFVLQ-GLANGVVGIAGLGRSKVALPLQLAAAFSFDRKFAI 107
               G  VTVP F+F C   F++Q GL     G+AGLG + ++LP QLA+ F   R+F  
Sbjct: 125 TQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTT 184

Query: 108 CLSPAFPRTNGVIIFGDGPYVLSP--NVDVSKSLTYTPLFINPVNTESGFLGDPSVEYFI 165
           CLS  +P + G IIFGD P  +    N D+   L +TPL I    T  G       EY +
Sbjct: 185 CLS-RYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTI----TLQG-------EYNV 232

Query: 166 GVKSIRVSDKAI-PLNTTLLSIDSEGFGGTKISTVNPYTVLETSIYNALVQAFVNAMPNV 224
            V SIR++  ++ PLN    +I     GGT IST  P+ VL+ S+Y A  Q F   +P  
Sbjct: 233 RVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQ 292

Query: 225 TRVAPVAPLGACFKSSDIVSSRFGPSVPPIDLVLQ--NNVSWSIIGANSIVRVNNNDVSC 282
            +V  VAP G CF S+ I       + P +DLV+   N   W I G + +V+     V+C
Sbjct: 293 AQVKSVAPFGLCFNSNKI------NAYPSVDLVMDKPNGPVWRISGEDLMVQAQPG-VTC 345

Query: 283 LGFVDGGVRPMTSIVIGGHQLENNLLQFDLPSSRLGFSNSLLFQRTV--CDNFNFTSA 338
           LG ++GG++P   I +G  QLE NL+ FDL  SR+GFS S L    V   D FNF +A
Sbjct: 346 LGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSHGVKCADLFNFANA 403


>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase
           Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase
 pdb|3HD8|C Chain C, Crystal Structure Of The Triticum Aestivum Xylanase
           Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase
          Length = 389

 Score =  137 bits (344), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 154/324 (47%), Gaps = 38/324 (11%)

Query: 25  NNPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGL 84
           +NP++    +G +     +  +T+G  P   V V   +  C    +L  L  G  G+AGL
Sbjct: 87  SNPVTGACAAGSLFHTRFAANTTDGNKPVSEVNV-RVLAACAPSKLLASLPRGSTGVAGL 145

Query: 85  GRSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVIIFGDGPYVLSPNVDVSKSLTYTPL 144
             S +ALP Q+A+A     KF +CL    P   GV IFG GP    P    ++S+ YTPL
Sbjct: 146 AGSGLALPSQVASAQKVPNKFLLCLPTGGP---GVAIFGGGPL---PWPQFTQSMDYTPL 199

Query: 145 FINPVNTESGFLGDPSVEYFIGVKSIRVSDKAIPLNTTLLSIDSEGFGGTKISTVNPYTV 204
                       G P+  ++I  +SI+V +  +P++   L+      GG  +ST  PY +
Sbjct: 200 VAK--------GGSPA--HYISARSIKVENTRVPISERALAT-----GGVMLSTRLPYVL 244

Query: 205 LETSIYNALVQAFVNAM--------PNVTRVAPVAPLGACFKSSDIVSSRFGPSVPPIDL 256
           L   +Y  LV AF  A+        P    V PVAP   C+ +  + ++  G  VP + L
Sbjct: 245 LRRDVYRPLVDAFTKALAAQPANGAPVARAVKPVAPFELCYDTKTLGNNPGGYWVPNVLL 304

Query: 257 VLQNNVSWSIIGANSIVRVNNNDVSCLGF-----VDGGVRPMTSIVIGGHQLENNLLQFD 311
            L     W++ G NS+V V     +C+ F     VD G     ++++GG Q+E+ +L FD
Sbjct: 305 ELDGGSDWAMTGKNSMVDVKPG-TACVAFVEMKGVDAGDGSAPAVILGGAQMEDFVLDFD 363

Query: 312 LPSSRLGFSNSLLFQRTVCDNFNF 335
           +   RLGF    L   T C +FNF
Sbjct: 364 MEKKRLGFLR--LPHFTGCSSFNF 385


>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase
           Inhibitor I
 pdb|1T6G|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase
           Inhibitor-i In Complex With Aspergillus Niger Xylanase-i
 pdb|1T6G|B Chain B, Crystal Structure Of The Triticum Aestivum Xylanase
           Inhibitor-i In Complex With Aspergillus Niger Xylanase-i
          Length = 381

 Score =  132 bits (331), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 146/309 (47%), Gaps = 36/309 (11%)

Query: 26  NPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGLG 85
           NP+S    +G +        +T+G  P   V V   +  C    +L  L  G  G+AGL 
Sbjct: 86  NPVSGACAAGSLSHTRFVANTTDGSKPVSKVNV-GVLAACAPSKLLASLPRGSTGVAGLA 144

Query: 86  RSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVIIFGDGPYVLSPNVDVSKSLTYTPLF 145
            S +ALP Q+A+A     +F +CL    P   GV IFG GP    P    ++S+ YTPL 
Sbjct: 145 NSGLALPAQVASAQKVANRFLLCLPTGGP---GVAIFGGGPV---PWPQFTQSMPYTPLV 198

Query: 146 INPVNTESGFLGDPSVEYFIGVKSIRVSDKAIPLNTTLLSIDSEGFGGTKISTVNPYTVL 205
                T+ G     S  ++I  +SI V D  +P+    L+      GG  +ST  PY +L
Sbjct: 199 -----TKGG-----SPAHYISARSIVVGDTRVPVPEGALAT-----GGVMLSTRLPYVLL 243

Query: 206 ETSIYNALVQAFVNAM--------PNVTRVAPVAPLGACFKSSDIVSSRFGPSVPPIDLV 257
              +Y  L+ AF  A+        P    V  VAP G C+ +  + ++  G +VP + L 
Sbjct: 244 RPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLG 303

Query: 258 LQNNVSWSIIGANSIVRVNNNDVSCLGFVD-----GGVRPMTSIVIGGHQLENNLLQFDL 312
           L     W++ G NS+V V     +C+ FV+      G     ++++GG Q+E+ +L FD+
Sbjct: 304 LDGGSDWTMTGKNSMVDVKQG-TACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDM 362

Query: 313 PSSRLGFSN 321
              RLGFS 
Sbjct: 363 EKKRLGFSR 371


>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In
           Complex With Bacillus Subtilis Xylanase
          Length = 381

 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 145/309 (46%), Gaps = 36/309 (11%)

Query: 26  NPISNTGTSGDIRIDVLSIQSTNGGNPGRAVTVPNFIFLCGSEFVLQGLANGVVGIAGLG 85
           NP+S    +G +        +T+G  P   V V   +  C    +L  L  G  G+AGL 
Sbjct: 86  NPVSGACAAGSLSHTRFVANTTDGSKPVSKVNV-GVLAACAPSKLLASLPRGSTGVAGLA 144

Query: 86  RSKVALPLQLAAAFSFDRKFAICLSPAFPRTNGVIIFGDGPYVLSPNVDVSKSLTYTPLF 145
            S +ALP Q+A+A     +F +CL    P   GV IFG GP    P    ++S+ YTPL 
Sbjct: 145 NSGLALPAQVASAQKVANRFLLCLPTGGP---GVAIFGGGPV---PWPQFTQSMPYTPLV 198

Query: 146 INPVNTESGFLGDPSVEYFIGVKSIRVSDKAIPLNTTLLSIDSEGFGGTKISTVNPYTVL 205
                T+ G     S  ++I  +SI V D  +P+    L+      GG  +ST  PY +L
Sbjct: 199 -----TKGG-----SPAHYISARSIVVGDTRVPVPEGALAT-----GGVMLSTRLPYVLL 243

Query: 206 ETSIYNALVQAFVNAMP--------NVTRVAPVAPLGACFKSSDIVSSRFGPSVPPIDLV 257
              +Y  L+ AF  A+             V  VAP G C+ +  + ++  G +VP + L 
Sbjct: 244 RPDVYRPLMDAFTKALAAQHANGAPVARAVVAVAPFGVCYDTKTLGNNLGGYAVPNVQLG 303

Query: 258 LQNNVSWSIIGANSIVRVNNNDVSCLGFVD-----GGVRPMTSIVIGGHQLENNLLQFDL 312
           L     W++ G NS+V V     +C+ FV+      G     ++++GG Q+E+ +L FD+
Sbjct: 304 LDGGSDWTMTGKNSMVDVKQG-TACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDM 362

Query: 313 PSSRLGFSN 321
              RLGFS 
Sbjct: 363 EKKRLGFSR 371


>pdb|2O7R|A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With
           Acyl Adduct
 pdb|2O7V|A Chain A, Carboxylesterase Aecxe1 From Actinidia Eriantha Covalently
           Inhibited By Paraoxon
          Length = 338

 Score = 32.7 bits (73), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 161 VEYFIGVKSIRVSDKAIPLNTTLLSIDSEGFGGTK 195
           + Y  G+++  V+D+ +PL    L +D  GFGG+K
Sbjct: 174 IAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSK 208


>pdb|4F5X|W Chain W, Location Of The Dsrna-dependent Polymerase, Vp1, In
           Rotavirus Particles
          Length = 1089

 Score = 30.4 bits (67), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 159 PSVEYFIGVKSIRVSDKAIPL-NTTLLSIDSEGFGGTKISTVNPYTVLETSIYNAL 213
           PS+E    V S+  ++  + L +  +  ID++ + G+KI + + Y +LE+ +YN L
Sbjct: 942 PSIEELYKVISLHENEIQLYLISLGIPKIDADTYVGSKIYSRDKYRILESYVYNLL 997


>pdb|2R7Q|A Chain A, Crystal Structure Of Vp1 Apoenzyme Of Rotavirus Sa11 (C-
           Terminal Hexahistidine-Tagged)
 pdb|2R7R|A Chain A, Crystal Structure Of Rotavirus Sa11 Vp1RNA (UGUGACC)
           Complex
 pdb|2R7S|A Chain A, Crystal Structure Of Rotavirus Sa11 Vp1  RNA (UGUGCC)
           Complex
 pdb|2R7T|A Chain A, Crystal Structure Of Rotavirus Sa11 Vp1RNA (UGUGAACC)
           Complex
 pdb|2R7U|A Chain A, Crystal Structure Of Rotavirus Sa11 Vp1RNA (AAAAGCC)
           Complex
 pdb|2R7V|A Chain A, Crystal Structure Of Rotavirus Sa11 Vp1RNA (GGCUUU)
           COMPLEX
 pdb|2R7W|A Chain A, Crystal Structure Of Rotavirus Sa11 Vp1RNA (UGUGACC)MRNA
           5'-Cap (M7gpppg) Complex
 pdb|2R7X|A Chain A, Crystal Structure Of Rotavirus Sa11 Vp1RNA (UGUGACC)GTP
           Complex
 pdb|2R7X|B Chain B, Crystal Structure Of Rotavirus Sa11 Vp1RNA (UGUGACC)GTP
           Complex
          Length = 1095

 Score = 30.4 bits (67), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 159 PSVEYFIGVKSIRVSDKAIPL-NTTLLSIDSEGFGGTKISTVNPYTVLETSIYNAL 213
           PS+E    V S+  ++  + L +  +  ID++ + G+KI + + Y +LE+ +YN L
Sbjct: 942 PSIEELYKVISLHENEIQLYLISLGIPKIDADTYVGSKIYSRDKYRILESYVYNLL 997


>pdb|2R7O|A Chain A, Crystal Structure Of Vp1 Apoenzyme Of Rotavirus Sa11 (N-
            Terminal Hexahistidine-Tagged)
 pdb|4AU6|A Chain A, Location Of The Dsrna-dependent Polymerase, Vp1, In
            Rotavirus Particles
 pdb|4AU6|B Chain B, Location Of The Dsrna-dependent Polymerase, Vp1, In
            Rotavirus Particles
 pdb|4AU6|C Chain C, Location Of The Dsrna-dependent Polymerase, Vp1, In
            Rotavirus Particles
 pdb|4AU6|D Chain D, Location Of The Dsrna-dependent Polymerase, Vp1, In
            Rotavirus Particles
 pdb|4AU6|E Chain E, Location Of The Dsrna-dependent Polymerase, Vp1, In
            Rotavirus Particles
          Length = 1095

 Score = 30.4 bits (67), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 159  PSVEYFIGVKSIRVSDKAIPL-NTTLLSIDSEGFGGTKISTVNPYTVLETSIYNAL 213
            PS+E    V S+  ++  + L +  +  ID++ + G+KI + + Y +LE+ +YN L
Sbjct: 948  PSIEELYKVISLHENEIQLYLISLGIPKIDADTYVGSKIYSRDKYRILESYVYNLL 1003


>pdb|1V47|A Chain A, Crystal Structure Of Atp Sulfurylase From Thermus
           Thermophillus Hb8 In Complex With Aps
 pdb|1V47|B Chain B, Crystal Structure Of Atp Sulfurylase From Thermus
           Thermophillus Hb8 In Complex With Aps
          Length = 349

 Score = 28.9 bits (63), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 121 IFGDGPYVLSPNVDVSKSLTYTPLFINPVNTESGF 155
           ++G GPY L+  V+V K    TPL   P    + F
Sbjct: 116 LYGKGPYALAGRVEVLKPRPRTPLEKTPEEVRAFF 150


>pdb|3FEC|A Chain A, Crystal Structure Of Human Glutamate Carboxypeptidase Iii
           (GcpiiiNAALADASE II), PSEUDO-Unliganded
 pdb|3FED|A Chain A, The High Resolution Structure Of Human Glutamate
           Carboxypeptidase Iii (GcpiiiNAALADASE II) IN COMPLEX
           WITH A TRANSITION STATE ANALOG OF Glu-Glu
 pdb|3FEE|A Chain A, The High Resolution Structure Of Human Glutamate
           Carboxypeptidase Iii (GcpiiiNAALADASE II) IN COMPLEX
           WITH QUISQUALIC ACID
 pdb|3FF3|A Chain A, The High Resolution Structure Of Human Glutamate
           Carboxypeptidase Iii (GcpiiiNAALADASE II) IN COMPLEX
           WITH L-Glutamate
          Length = 707

 Score = 28.9 bits (63), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 230 VAPLGACFKSSDIVSSRFGPSVPPIDLVLQNNVSWSIIGANSIVRVNNNDVSCLGFVDGG 289
           +AP    +K +  VS   GP     D      V   +   N I R+ N     +G + G 
Sbjct: 269 IAPPDKSWKGALNVSYSIGPGFTGSDSF--RKVRMHVYNINKITRIYN----VVGTIRGS 322

Query: 290 VRPMTSIVIGGHQ 302
           V P   +++GGH+
Sbjct: 323 VEPDRYVILGGHR 335


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.320    0.137    0.404 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,684,171
Number of Sequences: 62578
Number of extensions: 407546
Number of successful extensions: 744
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 715
Number of HSP's gapped (non-prelim): 18
length of query: 338
length of database: 14,973,337
effective HSP length: 99
effective length of query: 239
effective length of database: 8,778,115
effective search space: 2097969485
effective search space used: 2097969485
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)