BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>036454
EIFDLQEVNSEETHSGAATQLRELHVFHLPKLTKLWNKDPQGKLIFRNLVVVRIFDCQSL
KNIFPTSIARSLLRLETLSIKDCGSVEEIVANDGRGNDAATKFIFPSLTFLRLRDLPDLT
TFYSGMHILECPELRKLEVNHVDVFANLEELTLSKCIFTTWRQAQFHKLKILHFISDGSD
FFQVGLLQNIHNLEKLVLSTCEYKKIFSCEEVEEHAEGIAQIKSLKLKKLWLIEEHLWNP
DSKLDSFLQNLEFLEVKKCALSLISLVPSSASFRNLTVLKVCNCWQLISLVTPQTAKTLV
QLRELRVSECNRLEEIVANDGDADDEIVFSKLKWLFLESSESITSFCSGNYAFSFPSLED
LIVENCPKLNTFSAGVLKTPRLQAVQNWELGEDFWAGDVNTTLQHLKEKV

High Scoring Gene Products

Symbol, full name Information P value
TAO1
AT5G44510
protein from Arabidopsis thaliana 1.4e-05
RPS2
AT4G26090
protein from Arabidopsis thaliana 1.7e-05
AT4G19050 protein from Arabidopsis thaliana 0.00022

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036454
        (410 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2163426 - symbol:TAO1 "target of AVRB operatio...   137  1.4e-05   1
TAIR|locus:2005517 - symbol:RPS2 "RESISTANT TO P. SYRINGA...   135  1.7e-05   1
TAIR|locus:2117149 - symbol:AT4G19050 species:3702 "Arabi...    88  0.00022   2


>TAIR|locus:2163426 [details] [associations]
            symbol:TAO1 "target of AVRB operation1" species:3702
            "Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
            [GO:0006952 "defense response" evidence=IEA;ISS] [GO:0007165
            "signal transduction" evidence=IEA] [GO:0043531 "ADP binding"
            evidence=IEA] [GO:0042742 "defense response to bacterium"
            evidence=IMP] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
            InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 Pfam:PF01582
            PRINTS:PR00364 PROSITE:PS50104 SMART:SM00255 EMBL:CP002688
            GO:GO:0007165 GO:GO:0042742 GO:GO:0043531 GO:GO:0005622
            EMBL:AB017065 InterPro:IPR011713 Pfam:PF07725 SUPFAM:SSF52200
            HOGENOM:HOG000064702 IPI:IPI00534020 RefSeq:NP_199264.1
            UniGene:At.22810 ProteinModelPortal:Q9FI14 SMR:Q9FI14 PRIDE:Q9FI14
            EnsemblPlants:AT5G44510.1 GeneID:834478 KEGG:ath:AT5G44510
            TAIR:At5g44510 InParanoid:Q9FI14 OMA:ELPSSIW PhylomeDB:Q9FI14
            ProtClustDB:CLSN2916724 ArrayExpress:Q9FI14 Genevestigator:Q9FI14
            Uniprot:Q9FI14
        Length = 1187

 Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 68/277 (24%), Positives = 121/277 (43%)

Query:    16 GAATQLRELHVFHLPKLTKLWNKDPQGKLIFRNLVVVRIFDCQSLKNIFPTSIARSLLRL 75
             G AT L EL +     L KL      G L   NL  + +  C SL  + P+S   ++  L
Sbjct:   701 GNATNLLELDLIDCSSLVKL--PSSIGNLT--NLKKLFLNRCSSLVKL-PSSFG-NVTSL 754

Query:    76 ETLSIKDCGSVEEIVANDGRGNDAATKFIFPSLTFLRLRDLPDLTTFYSGMHILECPELR 135
             + L++  C S+ EI ++ G   +    +     + ++L       T    +H+L C  L 
Sbjct:   755 KELNLSGCSSLLEIPSSIGNIVNLKKVYADGCSSLVQLPSSIGNNTNLKELHLLNCSSLM 814

Query:   136 KLEVNHVDVFANLEELTLSKCIFTTWRQAQFHKLKILH-FISDGSDFFQVGL-LQNIHNL 193
             +   + +++   LE+L LS C+      +  + + +   ++SD S   ++   ++N  NL
Sbjct:   815 ECPSSMLNL-TRLEDLNLSGCLSLVKLPSIGNVINLQSLYLSDCSSLMELPFTIENATNL 873

Query:   194 EKLVLSTCEYKKIFSCEEVEEHAEGIAQIXXXXXXXXXXIEEHLWNPDSKLDSFLQNLEF 253
             + L L  C      +  E+      I  +          ++E    P S +++ + NL+ 
Sbjct:   874 DTLYLDGCS-----NLLELPSSIWNITNLQSLYLNGCSSLKEL---P-SLVENAI-NLQS 923

Query:   254 LEVKKCALSLISLVPSSASFRNLTVLKVCNCWQLISL 290
             L + KC+ SL+ L  S     NL+ L V NC  L+ L
Sbjct:   924 LSLMKCS-SLVELPSSIWRISNLSYLDVSNCSSLLEL 959


>TAIR|locus:2005517 [details] [associations]
            symbol:RPS2 "RESISTANT TO P. SYRINGAE 2" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0006952 "defense response" evidence=ISS;TAS]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0043531 "ADP binding" evidence=IEA] [GO:0009626 "plant-type
            hypersensitive response" evidence=IMP] [GO:0016045 "detection of
            bacterium" evidence=RCA;IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0042742 "defense response to bacterium" evidence=RCA;IMP]
            [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612 "protein
            targeting to membrane" evidence=RCA] [GO:0009595 "detection of
            biotic stimulus" evidence=RCA] [GO:0009617 "response to bacterium"
            evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
            evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
            acid mediated signaling pathway" evidence=RCA] [GO:0009863
            "salicylic acid mediated signaling pathway" evidence=RCA]
            [GO:0009867 "jasmonic acid mediated signaling pathway"
            evidence=RCA] [GO:0009963 "positive regulation of flavonoid
            biosynthetic process" evidence=RCA] [GO:0010200 "response to
            chitin" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
            metabolic process" evidence=RCA] [GO:0010363 "regulation of
            plant-type hypersensitive response" evidence=RCA] [GO:0031347
            "regulation of defense response" evidence=RCA] [GO:0031348
            "negative regulation of defense response" evidence=RCA] [GO:0043069
            "negative regulation of programmed cell death" evidence=RCA]
            [GO:0043900 "regulation of multi-organism process" evidence=RCA]
            [GO:0045087 "innate immune response" evidence=RCA] [GO:0050776
            "regulation of immune response" evidence=RCA] [GO:0050832 "defense
            response to fungus" evidence=RCA] [GO:0051707 "response to other
            organism" evidence=RCA] InterPro:IPR000767 InterPro:IPR002182
            InterPro:IPR003593 Pfam:PF00931 PRINTS:PR00364 SMART:SM00382
            GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0016045
            EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161564 GO:GO:0042742
            eggNOG:COG4886 GO:GO:0043531 EMBL:AL049483 GO:GO:0009626
            GO:GO:0017111 UniGene:At.46720 UniGene:At.69675 EMBL:U14158
            EMBL:U12860 EMBL:AF368301 EMBL:AF487797 EMBL:AF487798 EMBL:AF487799
            EMBL:AF487800 EMBL:AF487801 EMBL:AF487802 EMBL:AF487803
            EMBL:AF487804 EMBL:AF487805 EMBL:AF487806 EMBL:AF487807
            EMBL:AF487808 EMBL:AF487809 EMBL:AF487810 EMBL:AF487811
            EMBL:AF487812 EMBL:AF487813 EMBL:AF487814 EMBL:AF487815
            EMBL:AF487816 EMBL:AF487817 EMBL:AF487818 EMBL:AF487819
            EMBL:AF487820 EMBL:AF487821 EMBL:AF487822 EMBL:AF487823
            EMBL:AK117214 EMBL:BT005972 EMBL:U97217 IPI:IPI00547830 PIR:A54809
            RefSeq:NP_194339.1 UniGene:At.75226 PDB:2FT5 PDBsum:2FT5
            ProteinModelPortal:Q42484 SMR:Q42484 DIP:DIP-53465N IntAct:Q42484
            STRING:Q42484 EnsemblPlants:AT4G26090.1 GeneID:828715
            KEGG:ath:AT4G26090 TAIR:At4g26090 InParanoid:Q42484 KO:K13459
            OMA:AFNNDLE PhylomeDB:Q42484 ProtClustDB:CLSN2685902
            Genevestigator:Q42484 GermOnline:AT4G26090 Uniprot:Q42484
        Length = 909

 Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 37/123 (30%), Positives = 58/123 (47%)

Query:    24 LHVFHLPKLTKLWNKDPQGKLIFRNLVVVRIFDCQSLKNIFPTSIARSLLRLETLSIKDC 83
             LH  H   LT++W        + RN+  + I  C  LKN+   S  + L +LE + + DC
Sbjct:   752 LHSLH--NLTRVWGNSVSQDCL-RNIRCINISHCNKLKNV---SWVQKLPKLEVIELFDC 805

Query:    84 GSVEEIVANDGRGNDAATKFIFPSLTFLRLRDLPDLTTFYSG---------MHILECPEL 134
               +EE+++ +          +FPSL  LR RDLP+L +             + I  CP +
Sbjct:   806 REIEELIS-EHESPSVEDPTLFPSLKTLRTRDLPELNSILPSRFSFQKVETLVITNCPRV 864

Query:   135 RKL 137
             +KL
Sbjct:   865 KKL 867


>TAIR|locus:2117149 [details] [associations]
            symbol:AT4G19050 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
            evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA]
            InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
            GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952
            EMBL:AL021711 eggNOG:COG4886 GO:GO:0043531 EMBL:AL161550
            IPI:IPI00517473 PIR:T04426 RefSeq:NP_193640.4 UniGene:At.74500
            ProteinModelPortal:P0CB16 SMR:P0CB16 PaxDb:P0CB16 PRIDE:P0CB16
            EnsemblPlants:AT4G19050.1 GeneID:827643 KEGG:ath:AT4G19050
            TAIR:At4g19050 HOGENOM:HOG000090532 KO:K06685 OMA:IFDVSGC
            Genevestigator:P0CB16 GermOnline:AT4G19050 Uniprot:P0CB16
        Length = 1201

 Score = 88 (36.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
 Identities = 49/162 (30%), Positives = 70/162 (43%)

Query:   237 LWNPDSKLD---SFLQNLEFLEVKKCALSLISLVPSSASF--RNLTVLKVCNCWQLISLV 291
             L+  D +L+   S   +L+ L +    L L SL  S   F  +NL  L V +C   I  +
Sbjct:  1035 LFESDEQLEKEKSSSPSLQTLWISNLPL-LTSLYSSKGGFIFKNLKKLSV-DCCPSIKWL 1092

Query:   292 TPQTAKTLVQLRELRVSECNRLEEIVANDGDADDEIVFSKLKWLFLESSESITSFCSGNY 351
              P+    L     LRV  C++LE +   +  A +    SKL+ L L     + S    N 
Sbjct:  1093 FPEIPDNL---EILRVKFCDKLERLF--EVKAGE---LSKLRKLHLLDLP-VLSVLGAN- 1142

Query:   352 AFSFPSLEDLIVENCPKLNTFSAGVLKTPRLQAVQNWELGED 393
                FP+LE   +E CPKL          PR+ A    E+ ED
Sbjct:  1143 ---FPNLEKCTIEKCPKLKARE----DEPRIGARITDEISED 1177

 Score = 87 (35.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
 Identities = 45/191 (23%), Positives = 84/191 (43%)

Query:    22 RELHVFHLPKLTKLWNKDPQGKLIFRNLVVVRIFDCQSLKNIFPTSIARSLLRLETLSIK 81
             +EL +  + K +     D    ++  N +++R  +C  ++ + P SI + L  LE   + 
Sbjct:   679 KELRILDMSKTSLPELADTIADVVNLNKLLLR--NCSLIEEL-P-SIEK-LTHLEVFDVS 733

Query:    82 DCGSVEEIVANDGRGNDAATKFIFPSLTFLRLRDLPDLTTFYSGMH---ILECPELRKLE 138
              C  ++ I  N   G  +    +  +L+   L +LPD  +  S +    I +C +L+ L 
Sbjct:   734 GCIKLKNI--NGSFGEMSYLHEV--NLSETNLSELPDKISELSNLKELIIRKCSKLKTLP 789

Query:   139 VNHVDVFANLEELTLSKCIFTTWRQAQFHKLKILHFISDGSDFFQVGLLQN----IHNLE 194
               +++   NLE   +S C      +  F  L  LH ++       +G L N    + NL+
Sbjct:   790 --NLEKLTNLEIFDVSGCTELETIEGSFENLSCLHKVNLSET--NLGELPNKISELSNLK 845

Query:   195 KLVLSTCEYKK 205
             +L+L  C   K
Sbjct:   846 ELILRNCSKLK 856


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.406    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      410       400   0.00098  117 3  11 22  0.37    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  621 (66 KB)
  Total size of DFA:  271 KB (2142 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  31.89u 0.08s 31.97t   Elapsed:  00:00:06
  Total cpu time:  31.89u 0.08s 31.97t   Elapsed:  00:00:06
  Start:  Mon May 20 14:53:56 2013   End:  Mon May 20 14:54:02 2013

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