BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036458
(445 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P50396|GDIA_MOUSE Rab GDP dissociation inhibitor alpha OS=Mus musculus GN=Gdi1 PE=1
SV=3
Length = 447
Score = 541 bits (1395), Expect = e-153, Method: Compositional matrix adjust.
Identities = 251/433 (57%), Positives = 336/433 (77%), Gaps = 3/433 (0%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN-LTQLWKRFKGDD 59
MDE+YDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES+S+ L +L+KRF+ +
Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQILE 60
Query: 60 KPPERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVP 119
PPE +G +++NVD+IPKF+MANG LV++L++T+VT+YL+FK V+GSFVY GKIYKVP
Sbjct: 61 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP 120
Query: 120 ATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDD 179
+T+ EAL S LMG+FEKRR RKF ++V ++E+DPK+ EG+D + R++ K+ L D
Sbjct: 121 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQD 180
Query: 180 TIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFA 239
IDF GHALAL+ D YL++P ++ + RIKLY+ESLAR+ G SPY+YPLYGLGELPQ FA
Sbjct: 181 VIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 239
Query: 240 RLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVGKVA 299
RLSA+YGGTYMLNKP + + +GKV+GV SEGE A+CK+++CDPSY+PD+VQK G+V
Sbjct: 240 RLSAIYGGTYMLNKPVDDIIME-NGKVVGVKSEGEVARCKQLICDPSYIPDRVQKAGQVI 298
Query: 300 RAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAE 359
R ICI++HPI +TND++SCQ+I+PQ Q+ RKSD+Y+ SYAHNVA G+YIA ST E
Sbjct: 299 RIICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVE 358
Query: 360 TDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFESTVQDVL 419
T PE E++P ++LL P+D+ F D + P ++ F S SYDATTHFE+T D+
Sbjct: 359 TAEPEKEVEPALELLEPIDQKFVAISDLYEPIDDGSESQVFCSCSYDATTHFETTCNDIK 418
Query: 420 EMYTKITGKAVDL 432
++Y ++ G A D
Sbjct: 419 DIYKRMAGSAFDF 431
>sp|P21856|GDIA_BOVIN Rab GDP dissociation inhibitor alpha OS=Bos taurus GN=GDI1 PE=1
SV=1
Length = 447
Score = 540 bits (1390), Expect = e-152, Method: Compositional matrix adjust.
Identities = 250/433 (57%), Positives = 337/433 (77%), Gaps = 3/433 (0%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN-LTQLWKRFKGDD 59
MDE+YDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES+S+ L +L+KRF+ +
Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60
Query: 60 KPPERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVP 119
PPE +G +++NVD+IPKF+MANG LV++L++T+VT+YL+FK V+GSFVY GKIYKVP
Sbjct: 61 GPPETMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP 120
Query: 120 ATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDD 179
+T+ EAL S LMG+FEKRR RKF ++V ++E+DPK+ EG+D + R++ K+ L D
Sbjct: 121 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQD 180
Query: 180 TIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFA 239
IDF GHALAL+ D YL++P ++ + RIKLY+ESLAR+ G SPY+YPLYGLGELPQ FA
Sbjct: 181 VIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 239
Query: 240 RLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVGKVA 299
RLSA+YGGTYMLNKP + + +GKV+GV SEGE A+CK+++CDPSY+PD+V+K G+V
Sbjct: 240 RLSAIYGGTYMLNKPVDDIIME-NGKVVGVKSEGEVARCKQLICDPSYVPDRVRKAGQVI 298
Query: 300 RAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAE 359
R ICI++HPI +TND++SCQ+I+PQ Q+ RKSD+Y+ SYAHNVA G+YIA ST E
Sbjct: 299 RIICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVE 358
Query: 360 TDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFESTVQDVL 419
T +PE E++P ++LL P+D+ F D + P ++ F S SYDATTHFE+T D+
Sbjct: 359 TTDPEKEVEPALELLEPIDQKFVAISDLYEPIDDGSESQVFCSCSYDATTHFETTCNDIK 418
Query: 420 EMYTKITGKAVDL 432
++Y ++ G A D
Sbjct: 419 DIYKRMAGSAFDF 431
>sp|P50398|GDIA_RAT Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus GN=Gdi1
PE=1 SV=1
Length = 447
Score = 540 bits (1390), Expect = e-152, Method: Compositional matrix adjust.
Identities = 250/433 (57%), Positives = 336/433 (77%), Gaps = 3/433 (0%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN-LTQLWKRFKGDD 59
MDE+YDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES+S+ L +L+KRF+ +
Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60
Query: 60 KPPERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVP 119
PPE +G +++NVD+IPKF+MANG LV++L++T+VT+YL+FK V+GSFVY GKIYKVP
Sbjct: 61 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP 120
Query: 120 ATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDD 179
+T+ EAL S LMG+FEKRR RKF ++V ++E+DPK+ EG+D + R++ K+ L D
Sbjct: 121 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD 180
Query: 180 TIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFA 239
IDF GHALAL+ D YL++P ++ + RIKLY+ESLAR+ G SPY+YPLYGLGELPQ FA
Sbjct: 181 VIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 239
Query: 240 RLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVGKVA 299
RLSA+YGGTYMLNKP + + +GKV+GV SEGE A+CK+++CDPSY+PD+V+K G+V
Sbjct: 240 RLSAIYGGTYMLNKPVDDIIME-NGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVI 298
Query: 300 RAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAE 359
R ICI++HPI +TND++SCQ+I+PQ Q+ RKSD+Y+ SYAHNVA G+YIA ST E
Sbjct: 299 RIICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVE 358
Query: 360 TDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFESTVQDVL 419
T PE E++P ++LL P+D+ F D + P ++ F S SYDATTHFE+T D+
Sbjct: 359 TAEPEKEVEPALELLEPIDQKFVAISDLYEPIDDGSESQVFCSCSYDATTHFETTCNDIK 418
Query: 420 EMYTKITGKAVDL 432
++Y ++ G A D
Sbjct: 419 DIYKRMAGSAFDF 431
>sp|P60028|GDIA_PANTR Rab GDP dissociation inhibitor alpha OS=Pan troglodytes GN=GDI1
PE=2 SV=1
Length = 447
Score = 540 bits (1390), Expect = e-152, Method: Compositional matrix adjust.
Identities = 251/433 (57%), Positives = 337/433 (77%), Gaps = 3/433 (0%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN-LTQLWKRFKGDD 59
MDE+YDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES+S+ L +L+KRF+ +
Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60
Query: 60 KPPERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVP 119
PPE +G +++NVD+IPKF+MANG LV++L++T+VT+YL+FK V+GSFVY GKIYKVP
Sbjct: 61 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP 120
Query: 120 ATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDD 179
+T+ EAL S LMG+FEKRR RKF ++V ++E+DPK+ EG+D + R++ K+ L D
Sbjct: 121 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD 180
Query: 180 TIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFA 239
IDF GHALAL+ D YL++P ++ V RIKLY+ESLAR+ G SPY+YPLYGLGELPQ FA
Sbjct: 181 VIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 239
Query: 240 RLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVGKVA 299
RLSA+YGGTYMLNKP + + +GKV+GV SEGE A+CK+++CDPSY+PD+V+K G+V
Sbjct: 240 RLSAIYGGTYMLNKPVDDIIME-NGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVI 298
Query: 300 RAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAE 359
R ICI++HPI +TND++SCQ+I+PQ Q+ RKSD+Y+ SYAHNVA G+YIA ST E
Sbjct: 299 RIICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVE 358
Query: 360 TDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFESTVQDVL 419
T +PE E++P ++LL P+D+ F D + P ++ F S SYDATTHFE+T D+
Sbjct: 359 TTDPEKEVEPALELLEPIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIK 418
Query: 420 EMYTKITGKAVDL 432
++Y ++ G A D
Sbjct: 419 DIYKRMAGTAFDF 431
>sp|P31150|GDIA_HUMAN Rab GDP dissociation inhibitor alpha OS=Homo sapiens GN=GDI1 PE=1
SV=2
Length = 447
Score = 540 bits (1390), Expect = e-152, Method: Compositional matrix adjust.
Identities = 251/433 (57%), Positives = 337/433 (77%), Gaps = 3/433 (0%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN-LTQLWKRFKGDD 59
MDE+YDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES+S+ L +L+KRF+ +
Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60
Query: 60 KPPERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVP 119
PPE +G +++NVD+IPKF+MANG LV++L++T+VT+YL+FK V+GSFVY GKIYKVP
Sbjct: 61 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP 120
Query: 120 ATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDD 179
+T+ EAL S LMG+FEKRR RKF ++V ++E+DPK+ EG+D + R++ K+ L D
Sbjct: 121 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD 180
Query: 180 TIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFA 239
IDF GHALAL+ D YL++P ++ V RIKLY+ESLAR+ G SPY+YPLYGLGELPQ FA
Sbjct: 181 VIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 239
Query: 240 RLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVGKVA 299
RLSA+YGGTYMLNKP + + +GKV+GV SEGE A+CK+++CDPSY+PD+V+K G+V
Sbjct: 240 RLSAIYGGTYMLNKPVDDIIME-NGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVI 298
Query: 300 RAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAE 359
R ICI++HPI +TND++SCQ+I+PQ Q+ RKSD+Y+ SYAHNVA G+YIA ST E
Sbjct: 299 RIICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVE 358
Query: 360 TDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFESTVQDVL 419
T +PE E++P ++LL P+D+ F D + P ++ F S SYDATTHFE+T D+
Sbjct: 359 TTDPEKEVEPALELLEPIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIK 418
Query: 420 EMYTKITGKAVDL 432
++Y ++ G A D
Sbjct: 419 DIYKRMAGTAFDF 431
>sp|O97555|GDIA_CANFA Rab GDP dissociation inhibitor alpha OS=Canis familiaris GN=GDI1
PE=2 SV=1
Length = 447
Score = 539 bits (1388), Expect = e-152, Method: Compositional matrix adjust.
Identities = 249/433 (57%), Positives = 336/433 (77%), Gaps = 3/433 (0%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN-LTQLWKRFKGDD 59
MDE+YDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES+S+ L +L+KRF+ +
Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60
Query: 60 KPPERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVP 119
PPE +G +++NVD+IPKF+MANG LV++L++T+VT+YL+FK V+GSF+Y GKIYKVP
Sbjct: 61 GPPEAMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFIYKGGKIYKVP 120
Query: 120 ATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDD 179
+T+ EAL S LMG+FEKRR RKF ++V ++E+DPK+ EG+D + R++ K+ L D
Sbjct: 121 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQSTSMRDVYRKFDLGQD 180
Query: 180 TIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFA 239
IDF GHALAL+ D YL++P ++ + RIKLY+ESLAR+ G SPY+YPLYGLGELPQ FA
Sbjct: 181 VIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 239
Query: 240 RLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVGKVA 299
RLSA+YGGTYMLNKP + + +GKV+GV SEGE A+CK+++CDPSY+PD+V+K G+V
Sbjct: 240 RLSAIYGGTYMLNKPVDDIIME-NGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVI 298
Query: 300 RAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAE 359
R ICI++HPI +TND++SCQ+I+PQ Q+ RKSD+Y+ SYAHNVA G+YIA ST E
Sbjct: 299 RIICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVE 358
Query: 360 TDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFESTVQDVL 419
T PE E++P ++LL P+D+ F D + P ++ F S SYDATTHFE+T D+
Sbjct: 359 TAEPEKEVEPALELLEPIDQKFVAISDLYEPIDDGSESQVFCSCSYDATTHFETTCNDIK 418
Query: 420 EMYTKITGKAVDL 432
++Y ++ G A D
Sbjct: 419 DIYKRMAGSAFDF 431
>sp|Q7YQM0|GDIA_PONPY Rab GDP dissociation inhibitor alpha OS=Pongo pygmaeus GN=GDI1 PE=2
SV=1
Length = 447
Score = 539 bits (1388), Expect = e-152, Method: Compositional matrix adjust.
Identities = 250/433 (57%), Positives = 337/433 (77%), Gaps = 3/433 (0%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN-LTQLWKRFKGDD 59
MDE+YDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES+S+ L +L+KRF+ +
Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60
Query: 60 KPPERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVP 119
PPE +G +++NVD+IPKF+MANG LV++L++T+VT+YL+FK V+GSFVY GKIYKVP
Sbjct: 61 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP 120
Query: 120 ATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDD 179
+T+ EAL S LMG+FEKRR RKF ++V ++E+DPK+ EG+D + R++ K+ L D
Sbjct: 121 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD 180
Query: 180 TIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFA 239
IDF GHALAL+ D YL++P ++ + RIKLY+ESLAR+ G SPY+YPLYGLGELPQ FA
Sbjct: 181 VIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 239
Query: 240 RLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVGKVA 299
RLSA+YGGTYMLNKP + + +GKV+GV SEGE A+CK+++CDPSY+PD+V+K G+V
Sbjct: 240 RLSAIYGGTYMLNKPVDDIIME-NGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVI 298
Query: 300 RAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAE 359
R ICI++HPI +TND++SCQ+I+PQ Q+ RKSD+Y+ SYAHNVA G+YIA ST E
Sbjct: 299 RIICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVE 358
Query: 360 TDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFESTVQDVL 419
T +PE E++P ++LL P+D+ F D + P ++ F S SYDATTHFE+T D+
Sbjct: 359 TTDPEKEVEPALELLEPIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIK 418
Query: 420 EMYTKITGKAVDL 432
++Y ++ G A D
Sbjct: 419 DIYKRMAGTAFDF 431
>sp|P50395|GDIB_HUMAN Rab GDP dissociation inhibitor beta OS=Homo sapiens GN=GDI2 PE=1
SV=2
Length = 445
Score = 539 bits (1388), Expect = e-152, Method: Compositional matrix adjust.
Identities = 255/435 (58%), Positives = 332/435 (76%), Gaps = 7/435 (1%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN-LTQLWKRFKGDD 59
M+E+YDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES S+ L L+KRFK
Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPG 60
Query: 60 KPPERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVP 119
PPE +G +++NVD+IPKF+MANG LV++L++T+VT+YL+FK +GSFVY GKIYKVP
Sbjct: 61 SPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVP 120
Query: 120 ATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDD 179
+T+ EAL S LMGLFEKRR RKF +YV ++E DP++ EG+D K T R++ K+ L D
Sbjct: 121 STEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQD 180
Query: 180 TIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFA 239
IDF GHALAL+ D YL++P + + RIKLY+ESLAR+ G SPY+YPLYGLGELPQ FA
Sbjct: 181 VIDFTGHALALYRTDDYLDQPCYETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 239
Query: 240 RLSAVYGGTYMLNKP--ECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVGK 297
RLSA+YGGTYMLNKP E V+ +GKVIGV SEGE A+CK+++CDPSY+ D+V+KVG+
Sbjct: 240 RLSAIYGGTYMLNKPIEEIIVQ---NGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQ 296
Query: 298 VARAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTE 357
V R ICI++HPI +TND++SCQ+I+PQ Q+ RKSD+Y+ S+AHNVA G+YIA VST
Sbjct: 297 VIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTT 356
Query: 358 AETDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFESTVQD 417
ET PE E++P ++LL P+++ F D VP + FIS +YDATTHFE+T D
Sbjct: 357 VETKEPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFETTCDD 416
Query: 418 VLEMYTKITGKAVDL 432
+ +Y ++TG D
Sbjct: 417 IKNIYKRMTGSEFDF 431
>sp|Q8HXX7|GDIA_MACFA Rab GDP dissociation inhibitor alpha OS=Macaca fascicularis GN=GDI1
PE=2 SV=1
Length = 447
Score = 538 bits (1387), Expect = e-152, Method: Compositional matrix adjust.
Identities = 250/433 (57%), Positives = 337/433 (77%), Gaps = 3/433 (0%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN-LTQLWKRFKGDD 59
MDE+YDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES+S+ L +L+KRF+ +
Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60
Query: 60 KPPERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVP 119
PPE +G +++NVD+IPKF+MANG LV++L++T+VT+YL+FK V+GSFVY GKIYKVP
Sbjct: 61 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP 120
Query: 120 ATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDD 179
+T+ EAL S LMG+FEKRR RKF ++V ++E+DPK+ EG+D + R++ K+ L D
Sbjct: 121 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD 180
Query: 180 TIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFA 239
IDF GHALAL+ D YL++P ++ + RIKLY+ESLAR+ G SPY+YPLYGLGELPQ FA
Sbjct: 181 VIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 239
Query: 240 RLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVGKVA 299
RLSA+YGGTYMLNKP + + +GKV+GV SEGE A+CK+++CDPSY+PD+V+K G+V
Sbjct: 240 RLSAIYGGTYMLNKPVDDIIME-NGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVI 298
Query: 300 RAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAE 359
R ICI++HPI +TND++SCQ+I+PQ Q+ RKSD+Y+ SYAHNVA G+YIA ST E
Sbjct: 299 RIICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVE 358
Query: 360 TDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFESTVQDVL 419
T +PE E++P ++LL P+D+ F D + P ++ F S SYDATTHFE+T D+
Sbjct: 359 TTDPEKEVEPALELLEPIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIK 418
Query: 420 EMYTKITGKAVDL 432
++Y ++ G A D
Sbjct: 419 DIYKRMAGMAFDF 431
>sp|Q5RCE1|GDIB_PONAB Rab GDP dissociation inhibitor beta OS=Pongo abelii GN=GDI2 PE=2
SV=1
Length = 445
Score = 536 bits (1381), Expect = e-151, Method: Compositional matrix adjust.
Identities = 254/435 (58%), Positives = 332/435 (76%), Gaps = 7/435 (1%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN-LTQLWKRFKGDD 59
M+E+YDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES S+ L L+KR+K
Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRYKIPG 60
Query: 60 KPPERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVP 119
PPE +G +++NVD+IPKF+MANG LV++L++T+VT+YL+FK +GSFVY GKIYKVP
Sbjct: 61 SPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVP 120
Query: 120 ATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDD 179
+T+ EAL S LMGLFEKRR RKF +YV ++E DP++ EG+D K T R++ K+ L D
Sbjct: 121 STEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQD 180
Query: 180 TIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFA 239
IDF GHALAL+ D YL++P + + RIKLY+ESLAR+ G SPY+YPLYGLGELPQ FA
Sbjct: 181 VIDFTGHALALYRTDDYLDQPCYETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 239
Query: 240 RLSAVYGGTYMLNKP--ECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVGK 297
RLSA+YGGTYMLNKP E V+ +GKVIGV SEGE A+CK+++CDPSY+ D+V+KVG+
Sbjct: 240 RLSAIYGGTYMLNKPIEEIIVQ---NGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQ 296
Query: 298 VARAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTE 357
V R ICI++HPI +TND++SCQ+I+PQ Q+ RKSD+Y+ S+AHNVA G+YIA VST
Sbjct: 297 VIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTT 356
Query: 358 AETDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFESTVQD 417
ET PE E++P ++LL P+++ F D VP + FIS +YDATTHFE+T D
Sbjct: 357 VETKEPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESLIFISRTYDATTHFETTCDD 416
Query: 418 VLEMYTKITGKAVDL 432
+ +Y ++TG D
Sbjct: 417 IKNIYKRMTGSEFDF 431
>sp|P50399|GDIB_RAT Rab GDP dissociation inhibitor beta OS=Rattus norvegicus GN=Gdi2
PE=1 SV=2
Length = 445
Score = 533 bits (1373), Expect = e-150, Method: Compositional matrix adjust.
Identities = 250/435 (57%), Positives = 334/435 (76%), Gaps = 7/435 (1%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN-LTQLWKRFKGDD 59
M+E+YDVIVLGTGL ECILSG++SV+G KVLHMD+N YYGGES S+ L L+KRFK
Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASITPLEDLYKRFKLPG 60
Query: 60 KPPERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVP 119
+PP +G +++NVD+IPKF+MANG LV++L+ T+VT+Y++FK ++GSFVY GKIYKVP
Sbjct: 61 QPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKGGKIYKVP 120
Query: 120 ATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDD 179
+T+ EAL S LMGLFEKRR RKF +YV ++E DP++ EG+D K + R++ K+ L D
Sbjct: 121 STEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQD 180
Query: 180 TIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFA 239
IDF GH+LAL+ D YL++P + + RIKLY+ESLAR+ G SPY+YPLYGLGELPQ FA
Sbjct: 181 VIDFTGHSLALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 239
Query: 240 RLSAVYGGTYMLNKP--ECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVGK 297
RLSA+YGGTYMLNKP E V+ +GKV+GV SEGE A+CK+++CDPSY+ D+V+KVG+
Sbjct: 240 RLSAIYGGTYMLNKPIEEIIVQ---NGKVVGVKSEGEIARCKQLICDPSYVKDRVEKVGQ 296
Query: 298 VARAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTE 357
V R ICI++HPI +TND++SCQ+I+PQ Q+ RKSD+Y+ S+AHNVA G+YIA VST
Sbjct: 297 VIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTT 356
Query: 358 AETDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFESTVQD 417
ET PE E++P ++LL P+++ F D FVP + FIS +YDATTHFE+T D
Sbjct: 357 VETKEPEKEIRPALELLEPIEQKFVSISDLFVPKDLGTDSQIFISRAYDATTHFETTCDD 416
Query: 418 VLEMYTKITGKAVDL 432
+ ++Y ++TG D
Sbjct: 417 IKDIYKRMTGSEFDF 431
>sp|Q61598|GDIB_MOUSE Rab GDP dissociation inhibitor beta OS=Mus musculus GN=Gdi2 PE=1
SV=1
Length = 445
Score = 533 bits (1373), Expect = e-150, Method: Compositional matrix adjust.
Identities = 250/435 (57%), Positives = 334/435 (76%), Gaps = 7/435 (1%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN-LTQLWKRFKGDD 59
M+E+YDVIVLGTGL ECILSG++SV+G KVLHMD+N YYGGES S+ L L+KRFK
Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASITPLEDLYKRFKLPG 60
Query: 60 KPPERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVP 119
+PP +G +++NVD+IPKF+MANG LV++L+ T+VT+Y++FK ++GSFVY GKIYKVP
Sbjct: 61 QPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKGGKIYKVP 120
Query: 120 ATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDD 179
+T+ EAL S LMGLFEKRR RKF +YV ++E DP++ EG+D K + R++ K+ L D
Sbjct: 121 STEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQD 180
Query: 180 TIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFA 239
IDF GH+LAL+ D YL++P + + RIKLY+ESLAR+ G SPY+YPLYGLGELPQ FA
Sbjct: 181 VIDFTGHSLALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 239
Query: 240 RLSAVYGGTYMLNKP--ECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVGK 297
RLSA+YGGTYMLNKP E V+ +GKV+GV SEGE A+CK+++CDPSY+ D+V+KVG+
Sbjct: 240 RLSAIYGGTYMLNKPIEEIIVQ---NGKVVGVKSEGEIARCKQLICDPSYVKDRVEKVGQ 296
Query: 298 VARAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTE 357
V R ICI++HPI +TND++SCQ+I+PQ Q+ RKSD+Y+ S+AHNVA G+YIA VST
Sbjct: 297 VIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTT 356
Query: 358 AETDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFESTVQD 417
ET PE E++P ++LL P+++ F D FVP + FIS +YDATTHFE+T D
Sbjct: 357 VETKEPEKEIRPALELLEPIEQKFVSISDLFVPKDLGTDSQIFISRAYDATTHFETTCDD 416
Query: 418 VLEMYTKITGKAVDL 432
+ ++Y ++TG D
Sbjct: 417 IKDIYKRMTGSEFDF 431
>sp|P50397|GDIB_BOVIN Rab GDP dissociation inhibitor beta OS=Bos taurus GN=GDI2 PE=2 SV=3
Length = 445
Score = 532 bits (1371), Expect = e-150, Method: Compositional matrix adjust.
Identities = 250/433 (57%), Positives = 328/433 (75%), Gaps = 3/433 (0%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN-LTQLWKRFKGDD 59
M+E+YDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES S+ L L+KRFK
Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPG 60
Query: 60 KPPERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVP 119
PP +G +++NVD+IPKF+MANG LV++L+ T+VT+YL+FK +GSFVY GKIYKVP
Sbjct: 61 APPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKGGKIYKVP 120
Query: 120 ATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDD 179
+T+ EAL S LMGLFEKRR RKF +YV ++E+DP++ EG+D K + RE+ K+ L D
Sbjct: 121 STEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGIDPKKTSMREVYKKFDLGQD 180
Query: 180 TIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFA 239
IDF GHALAL+ D YL++P + + RIKLY+ESLAR+ G SPY+YPLYGLGELPQ FA
Sbjct: 181 VIDFTGHALALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 239
Query: 240 RLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVGKVA 299
RLSA+YGGTYMLNKP ++ +GKVIGV SEGE A+CK+++CDPSY+ D+V+KVG+V
Sbjct: 240 RLSAIYGGTYMLNKPIEEIIMQ-NGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVI 298
Query: 300 RAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAE 359
R ICI++HPI +TND++SCQ+I+PQ Q+ RKSD+Y+ S AHNVA G+YIA ST E
Sbjct: 299 RVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISSAHNVAAQGKYIAIASTTVE 358
Query: 360 TDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFESTVQDVL 419
T PE E++P ++LL P+++ F D VP + FIS +YDATTHFE+T D+
Sbjct: 359 TKEPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFETTCDDIK 418
Query: 420 EMYTKITGKAVDL 432
++Y ++ G D
Sbjct: 419 DIYKRMMGSEFDF 431
>sp|O97556|GDIB_CANFA Rab GDP dissociation inhibitor beta OS=Canis familiaris GN=GDI2
PE=2 SV=1
Length = 445
Score = 530 bits (1366), Expect = e-150, Method: Compositional matrix adjust.
Identities = 252/435 (57%), Positives = 329/435 (75%), Gaps = 7/435 (1%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN-LTQLWKRFKGDD 59
M+E+YDVIVLGTGL ECILSG+++V+G KVLHMDRN YYGGES S+ L L+KRFK
Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMTVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPG 60
Query: 60 KPPERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVP 119
PP +G +++N+D+IPKF+MANG LV++L++T+VT+YL+FK +GSFVY GKIYKVP
Sbjct: 61 APPASMGRGRDWNLDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVP 120
Query: 120 ATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDD 179
+T+ EAL S LMGLFEKRR RKF +YV ++E DP++ EG+D K E+ K+ L D
Sbjct: 121 STEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTAIGEVYKKFDLGQD 180
Query: 180 TIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFA 239
IDF GHALAL+ D YL++P + + RIKLY+ESLAR+ G SPY+YPLYGLGELPQ FA
Sbjct: 181 VIDFTGHALALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 239
Query: 240 RLSAVYGGTYMLNKP--ECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVGK 297
RLSA+YGGTYMLNKP E V+ +GKVIGV SEGE A+CK+++CDPSY+ D+V+KVG+
Sbjct: 240 RLSAIYGGTYMLNKPIEEIIVQ---NGKVIGVKSEGEVARCKQLICDPSYVKDRVEKVGQ 296
Query: 298 VARAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTE 357
V R ICI++HPI +TND++SCQ+I+PQ Q+ RKSD+Y+ S AHNVA G+YIA VST
Sbjct: 297 VIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISSAHNVAAQGKYIAIVSTT 356
Query: 358 AETDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFESTVQD 417
AET PE E++P ++LL P+++ F D VP + FIS +YDATTHFE+T D
Sbjct: 357 AETKEPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFETTCDD 416
Query: 418 VLEMYTKITGKAVDL 432
+ +Y ++TG D
Sbjct: 417 IKNIYKRMTGSEFDF 431
>sp|Q6Q7J2|GDIB_PIG Rab GDP dissociation inhibitor beta OS=Sus scrofa GN=GDI2 PE=2 SV=1
Length = 445
Score = 528 bits (1360), Expect = e-149, Method: Compositional matrix adjust.
Identities = 251/435 (57%), Positives = 328/435 (75%), Gaps = 7/435 (1%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN-LTQLWKRFKGDD 59
M+E+YDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES S+ L L+KRF
Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFNIPG 60
Query: 60 KPPERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVP 119
PP +G +++NVD+IPKF+MANG LV++L+ T+VT+YL+FK +GSFVY GKIYKVP
Sbjct: 61 APPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKGGKIYKVP 120
Query: 120 ATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDD 179
+T+ EAL S LMGLFEKRR RKF +YV ++E+DP++ EG+D K RE+ K+ L D
Sbjct: 121 STEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGVDPKKTAMREVYKKFDLGQD 180
Query: 180 TIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFA 239
IDF GHALAL+ D YL++P + + RIKLY+ESLAR+ G SPY+YPLYGLGELPQ FA
Sbjct: 181 VIDFTGHALALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 239
Query: 240 RLSAVYGGTYMLNKP--ECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVGK 297
RLSA+YGGTYMLNKP E V+ +GKVIGV SEGE A+CK+++CDPSY+ D+V+KVG+
Sbjct: 240 RLSAIYGGTYMLNKPIEEIIVQ---NGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQ 296
Query: 298 VARAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTE 357
V R ICI++HPI +T+D++SCQ+I+PQ Q+ RKSD+Y+ S AHNVA G+YIA ST
Sbjct: 297 VIRVICILSHPIKNTSDANSCQIIIPQNQVNRKSDIYVCMISSAHNVAAQGKYIAIASTT 356
Query: 358 AETDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFESTVQD 417
ET PE E++P ++LL P+++ F D VP + FIS +YDATTHFE+T D
Sbjct: 357 VETKEPEKEIRPALELLKPIEQKFVSISDLLVPKDLGTDSQIFISRTYDATTHFETTCGD 416
Query: 418 VLEMYTKITGKAVDL 432
+ ++Y ++TG D
Sbjct: 417 IKDIYKRMTGSEFDF 431
>sp|Q10305|GDI1_SCHPO Probable secretory pathway GDP dissociation inhibitor 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=gdi1 PE=3 SV=1
Length = 440
Score = 498 bits (1281), Expect = e-140, Method: Compositional matrix adjust.
Identities = 233/427 (54%), Positives = 317/427 (74%), Gaps = 1/427 (0%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDK 60
MDE+YDVIVLGTGL EC+LSG+LSVDG KVLH+DRN YYG +S SLNLTQL+ F+ ++
Sbjct: 1 MDEEYDVIVLGTGLTECVLSGLLSVDGKKVLHIDRNDYYGADSASLNLTQLYALFRPGEQ 60
Query: 61 PPERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVPA 120
PE LG +++ VD++PKF+MANG L ILI+TDVT+Y+ FK + GS+VY G+I KVP
Sbjct: 61 RPESLGRDRDWCVDLVPKFLMANGDLTNILIYTDVTRYIEFKQIAGSYVYRDGRIAKVPG 120
Query: 121 TDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDDT 180
++EALKSPLM LFEKRRA+KF +V Y EDDP +++ +++++ + + K+GL+ T
Sbjct: 121 NEMEALKSPLMSLFEKRRAKKFLEWVNNYREDDPSTYKDINIDRDSMESVFKKFGLQSGT 180
Query: 181 IDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFAR 240
DFIGHA+AL+++D+YL++PA + +RI LYA S+A+F G SPYIYPLYGLGELPQ FAR
Sbjct: 181 QDFIGHAMALYLDDAYLKKPARETRERILLYASSIAKF-GKSPYIYPLYGLGELPQGFAR 239
Query: 241 LSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVGKVAR 300
LSA+YGGTYMLN+P ++ + DG IGV S + AK K+++ DPSY +KV+ VG++ R
Sbjct: 240 LSAIYGGTYMLNQPVDEIVYGDDGVAIGVRSGDQVAKAKQIIGDPSYFREKVRSVGRLVR 299
Query: 301 AICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAET 360
AICI+NHPIP+T++ S Q+I+PQ Q+ RK D+Y+ S HNV P G Y+A +ST ET
Sbjct: 300 AICILNHPIPNTDNLDSVQIIIPQNQVKRKHDIYIAGISSVHNVCPKGYYLAIISTIVET 359
Query: 361 DNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFESTVQDVLE 420
NP E+ PG+ LLGPV E F + + P + D C+IS S DAT+HFE+ DV +
Sbjct: 360 ANPLSEIAPGLKLLGPVVESFSRVQEIYEPVTDGTKDQCYISKSVDATSHFETLTCDVRD 419
Query: 421 MYTKITG 427
+Y ++TG
Sbjct: 420 IYKRMTG 426
>sp|P39958|GDI1_YEAST Rab GDP-dissociation inhibitor OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GDI1 PE=1 SV=1
Length = 451
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/438 (52%), Positives = 321/438 (73%), Gaps = 7/438 (1%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGD-- 58
+D DYDVIVLGTG+ ECILSG+LSVDG KVLH+D+ +YGGE+ S+ L+QL+++FK +
Sbjct: 6 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPI 65
Query: 59 --DKPPERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIY 116
++ + G +++NVD+IPKF+MANG L ILIHTDVT+Y++FK V GS+V+ +GKIY
Sbjct: 66 SKEERESKFGKDRDWNVDLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIY 125
Query: 117 KVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGL 176
KVPA ++EA+ SPLMG+FEKRR +KF ++ Y+EDD +H+GLDL+K T E+ K+GL
Sbjct: 126 KVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGL 185
Query: 177 EDDTIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQ 236
+ T +FIGHA+AL ND YL++PA +RI LY +S+AR+ G SPY+YP+YGLGELPQ
Sbjct: 186 GNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARY-GKSPYLYPMYGLGELPQ 244
Query: 237 AFARLSAVYGGTYMLNKPECKVEFDGD-GKVIGVTSEGETAKCKKVVCDPSYLPDKVQKV 295
FARLSA+YGGTYML+ P +V + D GK GV ++ T K V+ DP+Y P+K +
Sbjct: 245 GFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYFPEKCKST 304
Query: 296 G-KVARAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFV 354
G +V RAICI+NHP+P+T+++ S Q+I+PQ QLGRKSD+Y+ S AHNV G Y+A +
Sbjct: 305 GQRVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYVAIVSDAHNVCSKGHYLAII 364
Query: 355 STEAETDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFEST 414
ST ETD P +EL+P LLGP++E F + F P + D+ ++S SYDA++HFES
Sbjct: 365 STIIETDKPHIELEPAFKLLGPIEEKFMGIAELFEPREDGSKDNIYLSRSYDASSHFESM 424
Query: 415 VQDVLEMYTKITGKAVDL 432
DV ++Y ++TG + L
Sbjct: 425 TDDVKDIYFRVTGHPLVL 442
>sp|Q9V8W3|RABEP_DROME Rab proteins geranylgeranyltransferase component A OS=Drosophila
melanogaster GN=Rep PE=2 SV=1
Length = 511
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 189/400 (47%), Gaps = 41/400 (10%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDK 60
+ E +D++V+GTG E ++ S G VLH+D N YYG +S ++ L R + +
Sbjct: 5 LPEQFDLVVIGTGFTESCIAAAGSRIGKSVLHLDSNEYYGDVWSSFSMDALCARLDQEVE 64
Query: 61 PPER---------------------------LGSSKEYNVDMIPKFMMANGGLVRILIHT 93
P L S+ +++D+ P+ + A G LV++LI +
Sbjct: 65 PHSALRNARYTWHSMEKESETDAQSWNRDSVLAKSRRFSLDLCPRILYAAGELVQLLIKS 124
Query: 94 DVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDD 153
++ +Y F+AVD + + G+I VP + + + + + EKR KF +Y ED
Sbjct: 125 NICRYAEFRAVDHVCMRHNGEIVSVPCSRSDVFNTKTLTIVEKRLLMKFLTACNDYGEDK 184
Query: 154 PKSHEGLDLNKVTAREIISKYGLEDDTIDFIGHALALHINDSYLEEPAMDFVKRIKLYAE 213
+ + L+ T E + + + + A+A+ + EE ++R + +
Sbjct: 185 -CNEDSLEFRGRTFLEYLQAQRVTEKISSCVMQAIAMCGPSTSFEEG----MQRTQRFLG 239
Query: 214 SLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEG 273
SL R+ G +P+++P+YG GELPQ F RL AVYGG Y L + + D + ++S G
Sbjct: 240 SLGRY-GNTPFLFPMYGCGELPQCFCRLCAVYGGIYCLKRAVDDIALDSNSNEFLLSSAG 298
Query: 274 ETAKCKKVVCDPSYLP--DKVQKVGKVARAICIMNHPIPDTNDSHSCQVI----LPQKQL 327
+T + K VV P Y P ++ ++R + I + P+ + + + L +
Sbjct: 299 KTLRAKNVVSAPGYTPVSKGIELKPHISRGLFISSSPLGNEELNKGGGGVNLLRLLDNEG 358
Query: 328 GRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAETDNPEVEL 367
GR++ +L S+ P G YI ++T A +++P +L
Sbjct: 359 GREA--FLIQLSHYTGACPEGLYIFHLTTPALSEDPASDL 396
>sp|Q9QZD5|RAE2_MOUSE Rab proteins geranylgeranyltransferase component A 2 OS=Mus
musculus GN=Chml PE=2 SV=2
Length = 621
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 150/305 (49%), Gaps = 13/305 (4%)
Query: 68 SKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALK 127
S+ +N+D++ K + + G L+ +LI ++V++Y FK V + +GK+ +VP + +
Sbjct: 225 SRRFNIDLVSKPLYSQGSLIDLLIKSNVSRYAEFKNVTRILAFWEGKVEQVPCSRADVFN 284
Query: 128 SPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDDTIDFIGHA 187
S + + EKR KF + +YE+ S E D + + + + L + FI H+
Sbjct: 285 SKELSMVEKRMLMKFLTFCLDYEQ---HSDEYQDFKQCSFSDYLKTKKLTPNLQHFILHS 341
Query: 188 LALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGG 247
+A+ S +D ++ K + + L RF G +P+I+PLYG GE+PQ F R+ AV+GG
Sbjct: 342 IAMTSESSCT---TLDGLQATKNFLQCLGRF-GNTPFIFPLYGHGEIPQCFCRMCAVFGG 397
Query: 248 TYML-NKPECKVEFDGDGKVIGVTSE-GETAKCKKVVCDPSYLPDKV---QKVGKVARAI 302
Y L +K +C V G+ G+ G+ + + SYLP + + +++RA+
Sbjct: 398 VYCLRHKVQCLVVDKDSGRCKGIIDAFGQRISANYFIVEDSYLPKETCSNVQYKQISRAV 457
Query: 303 CIMNHPIPDTNDSHSCQV-ILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAETD 361
I + I T+ + ++P + G S + CS + + + ++T
Sbjct: 458 LITDQSILKTDSDQQISILVVPPLEPGTTSVRVMELCSSTMTCMKDSYLVHLTCSSSKTA 517
Query: 362 NPEVE 366
++E
Sbjct: 518 REDLE 522
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFK 56
++DV+++GTGL E IL+ S G +VLH+D +YYGG S + T L K
Sbjct: 8 EFDVVIIGTGLPESILAAACSRSGQRVLHVDSRSYYGGNWASFSFTGLQSWLK 60
>sp|P26374|RAE2_HUMAN Rab proteins geranylgeranyltransferase component A 2 OS=Homo
sapiens GN=CHML PE=1 SV=2
Length = 656
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 150/304 (49%), Gaps = 13/304 (4%)
Query: 69 KEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKS 128
+ +N+D++ K + + G L+ +LI +DV++Y+ FK V + +GK+ +VP + + S
Sbjct: 227 RRFNIDLVSKLLYSQGLLIDLLIKSDVSRYVEFKNVTRILAFREGKVEQVPCSRADVFNS 286
Query: 129 PLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDDTIDFIGHAL 188
+ + EKR KF + EYE+ P ++ + + E + L + F+ H++
Sbjct: 287 KELTMVEKRMLMKFLTFCLEYEQ-HPDEYQA--FRQCSFSEYLKTKKLTPNLQHFVLHSI 343
Query: 189 ALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGT 248
A+ S +D + K + + L RF G +P+++PLYG GE+PQ F R+ AV+GG
Sbjct: 344 AMTSESSCT---TIDGLNATKNFLQCLGRF-GNTPFLFPLYGQGEIPQGFCRMCAVFGGI 399
Query: 249 YML-NKPECKVEFDGDGKVIGVTSE-GETAKCKKVVCDPSYLPDKV---QKVGKVARAIC 303
Y L +K +C V G+ + G+ K + + SYL ++ + +++RA+
Sbjct: 400 YCLRHKVQCFVVDKESGRCKAIIDHFGQRINAKYFIVEDSYLSEETCSNVQYKQISRAVL 459
Query: 304 IMNHPIPDTN-DSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAETDN 362
I + I T+ D + +I+P + G + CS + + + ++T
Sbjct: 460 ITDQSILKTDLDQQTSILIVPPAEPGACAVRVTELCSSTMTCMKDTYLVHLTCSSSKTAR 519
Query: 363 PEVE 366
++E
Sbjct: 520 EDLE 523
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFK 56
++DV+++GTGL E IL+ S G +VLH+D +YYGG S + + L K
Sbjct: 8 EFDVVIIGTGLPESILAAACSRSGQRVLHIDSRSYYGGNWASFSFSGLLSWLK 60
>sp|P24386|RAE1_HUMAN Rab proteins geranylgeranyltransferase component A 1 OS=Homo
sapiens GN=CHM PE=1 SV=3
Length = 653
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 148/304 (48%), Gaps = 13/304 (4%)
Query: 69 KEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKS 128
+ +N+D++ K + + G L+ +LI ++V++Y FK + + +G++ +VP + + S
Sbjct: 225 RRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGRVEQVPCSRADVFNS 284
Query: 129 PLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDDTIDFIGHAL 188
+ + EKR KF + EYE+ P ++G + ++T E + L + + H++
Sbjct: 285 KQLTMVEKRMLMKFLTFCMEYEK-YPDEYKGYE--EITFYEYLKTQKLTPNLQYIVMHSI 341
Query: 189 ALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGT 248
A+ S +D +K K + L R+ G +P+++PLYG GELPQ F R+ AV+GG
Sbjct: 342 AM---TSETASSTIDGLKATKNFLHCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGI 397
Query: 249 YMLNKP-ECKVEFDGDGKVIGVTSE-GETAKCKKVVCDPSYLPDKV---QKVGKVARAIC 303
Y L +C V K + + G+ + + + SY P+ + + +++RA+
Sbjct: 398 YCLRHSVQCLVVDKESRKCKAIIDQFGQRIISEHFLVEDSYFPENMCSRVQYRQISRAVL 457
Query: 304 IMNHPIPDTNDSHSCQVI-LPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAETDN 362
I + + T+ ++ +P ++ G + + CS + T ++T
Sbjct: 458 ITDRSVLKTDSDQQISILTVPAEEPGTFAVRVIELCSSTMTCMKGTYLVHLTCTSSKTAR 517
Query: 363 PEVE 366
++E
Sbjct: 518 EDLE 521
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFK 56
++DVIV+GTGL E I++ S G +VLH+D +YYGG S + + L K
Sbjct: 8 EFDVIVIGTGLPESIIAAACSRSGRRVLHVDSRSYYGGNWASFSFSGLLSWLK 60
>sp|Q9QXG2|RAE1_MOUSE Rab proteins geranylgeranyltransferase component A 1 OS=Mus
musculus GN=Chm PE=2 SV=1
Length = 665
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 154/314 (49%), Gaps = 23/314 (7%)
Query: 41 GESTSLNLTQLWKRFKGDDKPPER--------LGSSKEYNVDMIPKFMMANGGLVRILIH 92
+S++ +++ + + + + P+R + + +N+D++ K + + G L+ +LI
Sbjct: 201 AKSSTEQSSEILPKVQDNTETPKRNVITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIK 260
Query: 93 TDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEED 152
++V++Y FK + + +G + +VP + + S + + EKR KF + EY ED
Sbjct: 261 SNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEY-ED 319
Query: 153 DPKSHEGLDLNKVTAREIISKYGLEDDTIDFIGHALALHINDSYLEEPAMDFVKRIKLYA 212
P ++ + + T E + L + F+ H++A+ S +D +K K +
Sbjct: 320 HPDEYKAYE--ETTFSEYLKTQKLTPNLQYFVLHSIAM---TSETTSSTVDGLKATKKFL 374
Query: 213 ESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP-ECKVEFDGDGKVIGVTS 271
+ L R+ G +P+++PLYG GELPQ F R+ AV+GG Y L +C V K +
Sbjct: 375 QCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAIVD 433
Query: 272 E-GETAKCKKVVCDPSYLPDKV---QKVGKVARAICIMNHPI--PDTNDSHSCQVILPQK 325
+ G+ K V + SYL + + +++RA+ I + + PD+ D + +P +
Sbjct: 434 QFGQRIISKHFVIEDSYLSENTCSGVQYRQISRAVLITDGSVLKPDS-DQQVSILTVPAE 492
Query: 326 QLGRKSDMYLFCCS 339
+ G + + CS
Sbjct: 493 ESGSFAVRVIELCS 506
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFK 56
D+DVIV+GTGL E I++ S G +VLH+D +YYGG S + + L K
Sbjct: 8 DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLK 60
>sp|P37727|RAE1_RAT Rab proteins geranylgeranyltransferase component A 1 OS=Rattus
norvegicus GN=Chm PE=1 SV=1
Length = 650
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 138/269 (51%), Gaps = 19/269 (7%)
Query: 69 KEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKS 128
+ +N+D++ + + + G L+ +LI ++V++Y FK + + +G + +VP + + S
Sbjct: 222 RRFNIDLVSQLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNS 281
Query: 129 PLMGLFEKRRARKFFIYVQEYEE--DDPKSHEGLDLNKVTAREIISKYGLEDDTIDFIGH 186
+ + EKR KF + EYEE D+ +++EG T E + L + F+ H
Sbjct: 282 KQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEG-----TTFSEYLKTQKLTPNLQYFVLH 336
Query: 187 ALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYG 246
++A+ S +D +K K + + L R+ G +P+++PLYG GELPQ F R+ AV+G
Sbjct: 337 SIAM---TSETTSCTVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFG 392
Query: 247 GTYMLNKP-ECKVEFDGDGKVIGVTSE-GETAKCKKVVCDPSYLPD----KVQKVGKVAR 300
G Y L +C V K V + G+ K + + SYL + +VQ +++R
Sbjct: 393 GIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTCSRVQ-YRQISR 451
Query: 301 AICIMNHPIPDTNDSHSCQVI-LPQKQLG 328
A+ I + + T+ ++ +P ++ G
Sbjct: 452 AVLITDGSVLKTDADQQVSILAVPAEEPG 480
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFK 56
+ D+DVIV+GTGL E I++ S G +VLH+D +YYGG S + + L K
Sbjct: 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLK 60
>sp|P32864|RAEP_YEAST Rab proteins geranylgeranyltransferase component A OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MRS6 PE=1
SV=2
Length = 603
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 169/406 (41%), Gaps = 57/406 (14%)
Query: 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKP---- 61
DV++ GTG+ E +L+ L+ G VLH+D+N YYG S +L + Q+ KR+ +
Sbjct: 48 DVLIAGTGMVESVLAAALAWQGSNVLHIDKNDYYGDTSATLTVDQI-KRWVNEVNEGSVS 106
Query: 62 ---------PERLG----SSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSF 108
+G SS+++ +D+ PK + A L+ ILI + V +YL F+++
Sbjct: 107 CYKNAKLYVSTLIGSGKYSSRDFGIDLSPKILFAKSDLLSILIKSRVHQYLEFQSLSNFH 166
Query: 109 VYNKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAR 168
Y K+ T E + L KR KF +V LN
Sbjct: 167 TYENDCFEKLTNTKQEIFTDQNLPLMTKRNLMKFIKFV---------------LNWEAQT 211
Query: 169 EIISKYGLEDDTIDFIGHALALHINDSY-----------LEEPAMDFVKRIKLYAESLAR 217
EI Y E DF+G L + L + ++RI+ Y S
Sbjct: 212 EIWQPYA-ERTMSDFLGEKFKLEKPQVFELIFSIGLCYDLNVKVPEALQRIRRYLTSFDV 270
Query: 218 FQGGSPYIYPLY-GLGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETA 276
+ G P + Y G GEL Q F R +AV G TY LN E V F+ KV +
Sbjct: 271 Y-GPFPALCSKYGGPGELSQGFCRSAAVGGATYKLN--EKLVSFNPTTKVATFQDGSKVE 327
Query: 277 KCKKVVCDPSYLPDKVQKVG----KVARAICIMNHPIPDT-NDSHS-CQVILPQKQL--G 328
+KV+ P+ P + V +V R CI+ +P + N+ S V+ P L G
Sbjct: 328 VSEKVIISPTQAPKDSKHVPQQQYQVHRLTCIVENPCTEWFNEGESAAMVVFPPGSLKSG 387
Query: 329 RKSDMYLFCCSYAHNVAPNGQYIAFVSTEAETDNPEVELKPGIDLL 374
K + F + P G + ++ST + E+++ ++ +
Sbjct: 388 NKEVVQAFILGAGSEICPEGTIVWYLSTTEQGPRAEMDIDAALEAM 433
>sp|O93831|RAEP_CANAX Rab proteins geranylgeranyltransferase component A OS=Candida
albicans GN=MRS6 PE=3 SV=1
Length = 640
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 177/422 (41%), Gaps = 84/422 (19%)
Query: 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKP---- 61
DV+++GTGL+E IL+ LS G +VLH+D N YYG ++L + QL K++ GD
Sbjct: 5 DVLIIGTGLQESILAAALSWQGTQVLHIDSNTYYGDSCSTLTIEQL-KKWCGDVNSGKIH 63
Query: 62 -------------PERLGSSKEYNVDMIPKFMMANGGLVRILIHTDVTKYLNFKAVDGSF 108
+SK+Y +D+ PK M L+ +LI + V +YL F+++
Sbjct: 64 QFQDAQIYIPGGKQSNQYTSKDYGIDLTPKIMFCQSDLLSLLIKSRVYRYLEFQSLSNFH 123
Query: 109 VYN----KGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNK 164
V+ + K+ D+ KS + L KR + + ++ DP + +
Sbjct: 124 VFENDDFQQKVNATTKQDIFTDKS--LSLMTKR----YLMKFLKFLLLDPDYKQRVKPYA 177
Query: 165 VTAREII--SKYGLEDDTIDFIGHALALHINDSYLEEPAM-DFVKRIKLYAESLARFQGG 221
T ++ ++ LE+ I+ + +++ L SY E+ + + R+K + S +
Sbjct: 178 DTPIQVFLQQEFKLEEPQINELVYSIGL----SYKEQTSTKQALIRMKRFLSSFDVYGKF 233
Query: 222 SPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKV 281
+ G GEL Q F R +AV G TY LN +FD K+ +K+
Sbjct: 234 PCMVSKFGGPGELSQGFCRSAAVAGTTYKLNTN--LTDFDPISKIAHFNDGSHIKINEKI 291
Query: 282 VCDPSYLPDKVQK-----------------------------VGKVARAICIM-NHPIPD 311
+ P+ LP +Q G + AI + H +P
Sbjct: 292 IISPTQLPKFLQSSYNKVVENLQPYYVTRLVTVVRRDCKEWMSGNESSAIVVFPPHSLP- 350
Query: 312 TNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVST-EAETDNPEVELKPG 370
T++ HS QVI+ G V P+GQ I F ST E + +V+L+
Sbjct: 351 TDNQHSVQVIIQNGNSG---------------VCPDGQAIWFSSTVEQDLSRAKVDLESA 395
Query: 371 ID 372
+
Sbjct: 396 FE 397
>sp|O60112|YG63_SCHPO Uncharacterized Rab geranylgeranyltransferase C15C4.03
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC15C4.03 PE=3 SV=1
Length = 459
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 146/333 (43%), Gaps = 47/333 (14%)
Query: 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG---GESTSLNLTQLWKRFK----- 56
YDVI++GT L+ ILS LS +VLH+D N++YG G T +L Q+ ++ K
Sbjct: 7 YDVIIVGTNLRNSILSAALSWANQRVLHIDENSFYGEIDGSLTLRDLEQINEKIKKVDSS 66
Query: 57 ------GDDKPPERLGSSKEYNVDMIPKF-----------MMANGGLVRILIHTDVTKYL 99
G K P + + N D+IPK + A+ LV++L T + KYL
Sbjct: 67 QILNDNGSHKSPLKRFEVQFLNKDLIPKNKGSVIQFHPQEIFASSELVKLLSETKIYKYL 126
Query: 100 NFK-AVDGSFVYNKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQ----EYEEDDP 154
K A + + + KVP + + + + L KR +F +V E ++
Sbjct: 127 LLKPARSFRLLTSNEEWIKVPESRADIFNNKNLSLASKRIVMRFMKFVSNIADEQNQNLV 186
Query: 155 KSHEGLDLNKVTAREIISKYGLEDDTIDFIGHALALHINDSYLEEPAMDFVKRIKLYAES 214
K E K +E+ I + +L+ I P D + + Y S
Sbjct: 187 KEWESKPFYKFLEEVFQLSGAIEESIIYGLCQSLSKDI-------PTKDALDTVLKYFHS 239
Query: 215 LARFQGGSPYIYPLYGLG-ELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEG 273
+ G Y+ +YG G EL Q F R SAV GGT+ML + K++ + K+ V +G
Sbjct: 240 FGMY-GDYSYLLAMYGTGSELCQGFCRSSAVMGGTFMLGQAIDKID---ESKI--VLKDG 293
Query: 274 ETAKCKKVV--CDPSYLP-DKVQKVGKVARAIC 303
T KK+V D LP ++Q+ + + C
Sbjct: 294 STLSAKKIVSSVDEGKLPHQQIQQRYLLVKGDC 326
>sp|P26484|FIXC_AZOC5 Protein FixC OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM
5975 / ORS 571) GN=fixC PE=3 SV=2
Length = 435
Score = 35.8 bits (81), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45
+DE +D IV+G G+ + L+ GLKVL ++R Y G ++
Sbjct: 2 IDEKFDAIVVGAGMAGNAATLTLARRGLKVLQLERGEYSGSKNVQ 46
>sp|A5IYA9|EFTU_MYCAP Elongation factor Tu OS=Mycoplasma agalactiae (strain PG2) GN=tuf
PE=3 SV=1
Length = 396
Score = 35.8 bits (81), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 17/125 (13%)
Query: 113 GKIYKVPATDVEALKSPLMGLFEKRRA-RKFFIYVQEYEEDDPKSHEGLDLNKVTAREII 171
G I V ATD ++ L K+ K +++ + + P+ E +DL ++ RE++
Sbjct: 101 GSILVVAATDGAMPQTKEHVLLAKQVGVPKMVVFLNKCDMIKPEDAEMIDLVEMEVRELL 160
Query: 172 SKYGLEDDTIDFI-GHALA---------------LHINDSYLEEPAMDFVKRIKLYAESL 215
+KYG + D F+ G AL ++ D+++E P DF K + E +
Sbjct: 161 TKYGFDGDNTPFVRGSALQALQGKPEYEENILELMNAVDTWIETPVKDFEKPFLMAVEDV 220
Query: 216 ARFQG 220
G
Sbjct: 221 FTISG 225
>sp|Q9C0G6|DYH6_HUMAN Dynein heavy chain 6, axonemal OS=Homo sapiens GN=DNAH6 PE=1 SV=3
Length = 4158
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 276 AKCKKVVCDPSYLPDKVQKVGKVARAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYL 335
AK +K + +P ++P+KV+KV K +++C+ + S +V+ P++Q R + L
Sbjct: 2855 AKLQKYINNPDFVPEKVEKVSKACKSMCMWVRAMDLY--SRVVKVVEPKRQKLRAAQAEL 2912
>sp|Q54D38|C520A_DICDI Probable cytochrome P450 520A1 OS=Dictyostelium discoideum
GN=cyp520A1 PE=3 SV=1
Length = 536
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 203 DFVKRIKLYAESLARFQGGSPYIYPLYG----LGELP-QAFARLSAVYGGTYMLNKPECK 257
DF K+ K Y++S + + P+ P+ G +G+ P ++F+ LS +YGG Y + E
Sbjct: 18 DFYKKNKRYSKSPNK-EANGPWSLPIIGGLHLIGDRPNRSFSELSKIYGGIYKIWLAERM 76
Query: 258 VEFDGDGKVI 267
+ D ++I
Sbjct: 77 LMIVTDPEII 86
>sp|Q3U4I7|PYRD2_MOUSE Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Mus musculus GN=Pyroxd2 PE=2 SV=2
Length = 580
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 214 SLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVT-SE 272
SL QG Y+ G+G L A A +A G + K KV+ + +G+V GVT +
Sbjct: 271 SLEGTQGAWSYVQ--GGMGALSDAIASSAATRGASIFTEKTVAKVQVNSEGRVQGVTLQD 328
Query: 273 GETAKCKKVV 282
GE + + V+
Sbjct: 329 GEEVRSRVVL 338
>sp|Q52QW2|CRTS2_ONCHC Prolycopene isomerase 2, chloroplastic OS=Oncidium hybrid cultivar
GN=CRTISO2 PE=2 SV=1
Length = 587
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGES 43
E+YD IV+G+G+ + + L+V G +VL +++ GG S
Sbjct: 68 EEYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 108
>sp|Q52QW3|CRTS1_ONCHC Prolycopene isomerase 1, chloroplastic OS=Oncidium hybrid cultivar
GN=CRTISO1 PE=2 SV=1
Length = 587
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGES 43
E+YD IV+G+G+ + + L+V G +VL +++ GG S
Sbjct: 68 EEYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 108
>sp|Q05638|CHIX_STROI Exochitinase 1 OS=Streptomyces olivaceoviridis GN=chi01 PE=1 SV=1
Length = 597
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 169 EIISKYGLEDDTIDFIGHALALHINDSYLEEP 200
+II +YGL+ IDF GH+L+L+ +D+ + P
Sbjct: 369 KIIDEYGLDGLDIDFEGHSLSLNADDTDFKNP 400
>sp|Q8S4R4|CRTSO_SOLLC Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum
GN=CRTISO PE=1 SV=1
Length = 615
Score = 32.7 bits (73), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKR--FKGDDKPP 62
YD IV+G+G+ + + L+V G KVL +++ GG S ++R +K D
Sbjct: 98 YDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSS------GFYERDGYKFDVGSS 151
Query: 63 ERLGSSKEYNVDMIPKFMMANGGLVRIL 90
G S + N+++I + + A G + ++
Sbjct: 152 VMFGFSDKGNLNLITQALAAVGRKLEVI 179
>sp|O60524|NEMF_HUMAN Nuclear export mediator factor NEMF OS=Homo sapiens GN=NEMF PE=1
SV=4
Length = 1076
Score = 32.7 bits (73), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Query: 366 ELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHCFISTSYDATTHFESTVQDVLEMYTKI 425
E+KP ++ PV++I TY+ F P F S FES + V E Y+KI
Sbjct: 253 EIKPSLEADKPVEDIL--TYEEFHP-------FLFSQHSQCPYIEFESFDKAVDEFYSKI 303
Query: 426 TGKAVDL 432
G+ +DL
Sbjct: 304 EGQKIDL 310
>sp|P11707|CP3A6_RABIT Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CYP3A6 PE=2 SV=2
Length = 501
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 121 TDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREII---SKYGLE 177
T VE +K + +KRR + + + SH+ LD +V A+ II + Y
Sbjct: 249 TSVEKIKDDRLKDKQKRRVDFLQLMINSQNSKEIDSHKALDDIEVVAQSIIILFAGYETT 308
Query: 178 DDTIDFIGHALALH 191
T+ FI H LA H
Sbjct: 309 SSTLSFIMHLLATH 322
>sp|A8C750|THADA_CANFA Thyroid adenoma-associated protein homolog OS=Canis familiaris
GN=THADA PE=2 SV=1
Length = 1948
Score = 32.3 bits (72), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 129 PLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDDTIDFIGHAL 188
P L RR+ Y+Q +PK + +DL K+T +E+IS G DD+ +
Sbjct: 1148 PSSKLCATRRSAGIPFYIQALLASEPKKGK-MDLLKITMKELISLAGPTDDSQSTVPQVH 1206
Query: 189 ALHI 192
AL+I
Sbjct: 1207 ALNI 1210
>sp|Q65SA3|AMPA_MANSM Probable cytosol aminopeptidase OS=Mannheimia succiniciproducens
(strain MBEL55E) GN=pepA PE=3 SV=1
Length = 490
Score = 32.3 bits (72), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 6/116 (5%)
Query: 268 GVTSEGETAKCKKVVCDPSYLPDKVQKVGKVARAICIMNHPIPDTNDSHSCQVILPQKQL 327
GV + + A C +C+P+YL ++ ++ R+ I I +
Sbjct: 176 GVKAAKDIANCPPNICNPAYLAEQANQLA--GRSSLIETTVIGEKEMRKLGMNAYLAVSC 233
Query: 328 GRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAETDNPEVELKPGIDLLGPVDEIFFD 383
G K++ L Y ++ PN + I D + LKP D+ DE+ +D
Sbjct: 234 GSKNEAKLSVMEYRNHENPNAKPIVLAGKGLTFDAGGISLKPAADM----DEMKYD 285
>sp|Q68FT3|PYRD2_RAT Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Rattus norvegicus GN=Pyroxd2 PE=2 SV=1
Length = 581
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 214 SLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEG 273
SL QG Y+ G+G L A A + +G + K KV+ + +G+V GV +G
Sbjct: 272 SLEGMQGAWSYVQ--GGMGALSDAIASSATAHGASIFTEKTVAKVQVNSEGRVQGVVLQG 329
Query: 274 ETAKCKKVV 282
+VV
Sbjct: 330 GEEVRSRVV 338
>sp|Q06401|3O1D_COMTE 3-oxosteroid 1-dehydrogenase OS=Comamonas testosteroni PE=1 SV=1
Length = 573
Score = 32.3 bits (72), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 2 DEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLW 52
+++YD+IV+G+G C GLK L +++ +GG S +L+ +W
Sbjct: 3 EQEYDLIVVGSGAGACWAPIRAQEQGLKTLVVEKTELFGGTS-ALSGGGIW 52
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 176,283,457
Number of Sequences: 539616
Number of extensions: 8028716
Number of successful extensions: 17649
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 17533
Number of HSP's gapped (non-prelim): 62
length of query: 445
length of database: 191,569,459
effective HSP length: 121
effective length of query: 324
effective length of database: 126,275,923
effective search space: 40913399052
effective search space used: 40913399052
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)