Query 036458
Match_columns 445
No_of_seqs 365 out of 2340
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 22:19:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036458.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036458hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p1w_A Rabgdi protein; GDI RAB 100.0 2.6E-87 8.8E-92 683.7 46.2 441 1-442 17-470 (475)
2 1vg0_A RAB proteins geranylger 100.0 3.3E-70 1.1E-74 572.0 44.2 431 1-440 5-610 (650)
3 2bcg_G Secretory pathway GDP d 100.0 1.2E-67 4E-72 542.5 44.8 438 1-439 8-451 (453)
4 1d5t_A Guanine nucleotide diss 100.0 1.4E-66 4.7E-71 531.4 45.6 430 1-432 3-433 (433)
5 4dgk_A Phytoene dehydrogenase; 100.0 1.9E-31 6.6E-36 276.4 30.9 320 5-359 2-377 (501)
6 3nrn_A Uncharacterized protein 100.0 2.9E-26 9.8E-31 232.5 33.8 364 5-425 1-403 (421)
7 3ka7_A Oxidoreductase; structu 100.0 6E-26 2E-30 230.0 33.7 368 5-427 1-425 (425)
8 2ivd_A PPO, PPOX, protoporphyr 99.9 3.6E-23 1.2E-27 213.0 31.4 383 3-427 15-471 (478)
9 3i6d_A Protoporphyrinogen oxid 99.9 2.1E-22 7.4E-27 206.2 28.7 386 1-426 1-465 (470)
10 3nks_A Protoporphyrinogen oxid 99.9 2.2E-22 7.7E-27 206.8 26.6 385 5-429 3-474 (477)
11 4gde_A UDP-galactopyranose mut 99.9 6.2E-23 2.1E-27 212.8 18.4 246 4-286 10-273 (513)
12 1sez_A Protoporphyrinogen oxid 99.9 1.8E-21 6.2E-26 201.6 29.1 394 1-426 10-490 (504)
13 1s3e_A Amine oxidase [flavin-c 99.9 4.6E-22 1.6E-26 207.1 24.7 256 1-287 1-266 (520)
14 3lov_A Protoporphyrinogen oxid 99.9 2.2E-21 7.7E-26 199.4 29.5 386 1-428 2-464 (475)
15 2vvm_A Monoamine oxidase N; FA 99.9 1.3E-22 4.6E-27 209.7 19.1 255 4-287 39-310 (495)
16 2yg5_A Putrescine oxidase; oxi 99.9 3.1E-21 1.1E-25 197.1 20.4 253 1-287 1-266 (453)
17 4dsg_A UDP-galactopyranose mut 99.8 1.1E-19 3.9E-24 187.3 21.1 375 3-426 8-452 (484)
18 2b9w_A Putative aminooxidase; 99.8 2E-19 6.7E-24 182.2 16.0 247 2-286 4-255 (424)
19 3k7m_X 6-hydroxy-L-nicotine ox 99.8 1.4E-18 4.8E-23 176.1 16.4 248 5-286 2-256 (431)
20 1rsg_A FMS1 protein; FAD bindi 99.8 5.7E-18 1.9E-22 176.0 15.6 233 4-286 8-254 (516)
21 2iid_A L-amino-acid oxidase; f 99.8 5.9E-17 2E-21 167.4 22.7 245 3-286 32-295 (498)
22 2e1m_A L-glutamate oxidase; L- 99.7 2.8E-17 9.5E-22 163.0 17.8 239 2-264 42-349 (376)
23 2jae_A L-amino acid oxidase; o 99.7 2E-17 7E-22 170.5 16.6 265 2-286 9-293 (489)
24 1v0j_A UDP-galactopyranose mut 99.7 2.3E-18 7.9E-23 173.2 7.3 353 1-426 4-384 (399)
25 2bi7_A UDP-galactopyranose mut 99.7 1.3E-17 4.5E-22 166.8 11.9 227 1-286 1-235 (384)
26 3hdq_A UDP-galactopyranose mut 99.7 1.3E-17 4.5E-22 166.6 10.3 346 2-427 27-389 (397)
27 1b37_A Protein (polyamine oxid 99.7 1.3E-16 4.3E-21 164.0 14.2 241 1-286 1-267 (472)
28 1i8t_A UDP-galactopyranose mut 99.7 9.6E-17 3.3E-21 159.6 9.3 227 4-286 1-232 (367)
29 4gut_A Lysine-specific histone 99.5 1.9E-12 6.5E-17 139.8 19.6 74 4-96 336-411 (776)
30 3ayj_A Pro-enzyme of L-phenyla 99.4 1.1E-13 3.8E-18 146.9 9.4 80 4-96 56-162 (721)
31 2z3y_A Lysine-specific histone 99.4 2.8E-12 9.7E-17 136.9 18.9 73 3-95 106-180 (662)
32 2xag_A Lysine-specific histone 99.4 1.6E-12 5.5E-17 141.3 16.4 73 3-95 277-351 (852)
33 3dme_A Conserved exported prot 99.3 5.5E-12 1.9E-16 124.1 13.3 47 1-47 1-47 (369)
34 3qj4_A Renalase; FAD/NAD(P)-bi 99.3 1.7E-11 5.7E-16 120.2 14.9 44 5-48 2-48 (342)
35 3kkj_A Amine oxidase, flavin-c 99.3 2.9E-12 1E-16 119.1 7.9 62 4-85 2-63 (336)
36 3dje_A Fructosyl amine: oxygen 99.3 2.6E-11 9E-16 122.8 14.2 65 224-289 149-221 (438)
37 3nyc_A D-arginine dehydrogenas 99.2 8E-11 2.7E-15 116.5 14.6 63 225-289 144-209 (381)
38 1yvv_A Amine oxidase, flavin-c 99.2 7.3E-11 2.5E-15 114.8 12.9 60 4-83 2-61 (336)
39 3ps9_A TRNA 5-methylaminomethy 99.1 6.3E-10 2.2E-14 119.1 17.0 63 224-288 406-472 (676)
40 1y56_B Sarcosine oxidase; dehy 99.1 4.6E-10 1.6E-14 111.3 14.8 64 225-289 139-205 (382)
41 3pvc_A TRNA 5-methylaminomethy 99.1 1.5E-09 5.1E-14 116.4 19.0 64 224-289 401-469 (689)
42 3v76_A Flavoprotein; structura 99.1 8.4E-10 2.9E-14 111.2 15.8 63 224-288 124-186 (417)
43 1pj5_A N,N-dimethylglycine oxi 99.1 1.3E-09 4.3E-14 119.5 17.5 64 225-289 141-207 (830)
44 2gag_B Heterotetrameric sarcos 99.1 2E-09 6.9E-14 107.4 17.6 65 224-289 163-230 (405)
45 4at0_A 3-ketosteroid-delta4-5a 99.0 6.2E-09 2.1E-13 107.7 17.8 57 233-289 203-264 (510)
46 2oln_A NIKD protein; flavoprot 99.0 5E-09 1.7E-13 104.5 15.9 62 225-288 143-207 (397)
47 3da1_A Glycerol-3-phosphate de 99.0 3.2E-09 1.1E-13 111.0 13.3 65 224-289 160-232 (561)
48 2uzz_A N-methyl-L-tryptophan o 99.0 3.6E-09 1.2E-13 104.4 12.6 61 226-288 140-203 (372)
49 3cgv_A Geranylgeranyl reductas 98.9 4.1E-09 1.4E-13 104.7 12.2 56 233-289 103-162 (397)
50 2gqf_A Hypothetical protein HI 98.9 1.2E-08 4.3E-13 102.1 15.6 64 225-289 102-168 (401)
51 2i0z_A NAD(FAD)-utilizing dehy 98.9 1.5E-08 5E-13 103.1 16.2 64 225-289 126-191 (447)
52 1ryi_A Glycine oxidase; flavop 98.9 5.4E-09 1.9E-13 103.5 12.1 64 224-289 153-219 (382)
53 1y0p_A Fumarate reductase flav 98.9 9.2E-08 3.1E-12 100.2 21.5 58 232-289 255-317 (571)
54 2gf3_A MSOX, monomeric sarcosi 98.9 8.1E-09 2.8E-13 102.4 11.6 56 232-289 150-205 (389)
55 3nix_A Flavoprotein/dehydrogen 98.9 1.3E-08 4.5E-13 102.2 13.2 40 1-40 1-41 (421)
56 1qo8_A Flavocytochrome C3 fuma 98.9 8.2E-08 2.8E-12 100.5 19.4 63 226-289 241-312 (566)
57 3axb_A Putative oxidoreductase 98.9 1.7E-08 6E-13 102.3 13.5 64 225-288 171-253 (448)
58 2rgh_A Alpha-glycerophosphate 98.8 1.8E-08 6E-13 105.6 12.9 57 232-289 188-250 (571)
59 3nlc_A Uncharacterized protein 98.8 1.1E-08 3.8E-13 106.2 10.7 57 232-289 220-277 (549)
60 3oz2_A Digeranylgeranylglycero 98.8 2.1E-09 7.2E-14 106.4 4.2 41 1-42 2-42 (397)
61 2x3n_A Probable FAD-dependent 98.7 1.2E-07 4.1E-12 94.5 13.9 56 233-289 108-166 (399)
62 3lxd_A FAD-dependent pyridine 98.7 4.4E-08 1.5E-12 98.5 10.7 59 231-290 193-252 (415)
63 4gcm_A TRXR, thioredoxin reduc 98.7 1.2E-08 4E-13 98.3 5.2 44 1-45 2-46 (312)
64 3fpz_A Thiazole biosynthetic e 98.7 1.1E-08 3.8E-13 99.4 4.8 42 3-44 64-107 (326)
65 4a5l_A Thioredoxin reductase; 98.6 1.5E-08 5.3E-13 97.3 5.1 38 1-38 1-38 (314)
66 3l8k_A Dihydrolipoyl dehydroge 98.5 3.3E-08 1.1E-12 101.0 3.8 45 1-45 1-45 (466)
67 3fg2_P Putative rubredoxin red 98.5 7E-07 2.4E-11 89.3 13.5 59 231-290 183-242 (404)
68 3oc4_A Oxidoreductase, pyridin 98.5 3.2E-07 1.1E-11 93.2 10.8 56 232-289 189-244 (452)
69 4fk1_A Putative thioredoxin re 98.5 5.8E-08 2E-12 93.2 4.9 40 3-43 5-44 (304)
70 3ab1_A Ferredoxin--NADP reduct 98.5 7.4E-08 2.5E-12 94.6 4.3 45 1-45 11-55 (360)
71 1c0p_A D-amino acid oxidase; a 98.5 1.3E-07 4.5E-12 93.0 6.0 41 1-41 3-43 (363)
72 2zbw_A Thioredoxin reductase; 98.5 8.4E-08 2.9E-12 93.0 4.5 45 1-45 2-46 (335)
73 3iwa_A FAD-dependent pyridine 98.4 6.4E-07 2.2E-11 91.5 10.9 58 231-289 201-258 (472)
74 3urh_A Dihydrolipoyl dehydroge 98.4 1.1E-07 3.6E-12 97.9 4.6 43 3-45 24-66 (491)
75 3cty_A Thioredoxin reductase; 98.4 1.4E-07 4.9E-12 90.8 5.3 44 1-45 13-56 (319)
76 3c96_A Flavin-containing monoo 98.4 1.5E-07 5.3E-12 94.2 5.4 41 1-41 1-42 (410)
77 3itj_A Thioredoxin reductase 1 98.4 1.4E-07 4.9E-12 91.2 4.6 45 2-46 20-68 (338)
78 3o0h_A Glutathione reductase; 98.4 1.4E-07 4.8E-12 96.8 4.3 57 232-289 232-288 (484)
79 4dna_A Probable glutathione re 98.4 1.4E-07 4.8E-12 96.2 4.2 43 1-44 1-44 (463)
80 1rp0_A ARA6, thiazole biosynth 98.4 2.2E-07 7.6E-12 88.4 5.3 41 3-43 38-79 (284)
81 3f8d_A Thioredoxin reductase ( 98.4 2.3E-07 7.8E-12 89.1 5.3 40 4-45 15-54 (323)
82 2gv8_A Monooxygenase; FMO, FAD 98.4 2.7E-07 9.2E-12 93.6 6.0 44 2-45 4-49 (447)
83 2q7v_A Thioredoxin reductase; 98.4 2.2E-07 7.6E-12 89.8 5.0 43 2-45 6-48 (325)
84 4a9w_A Monooxygenase; baeyer-v 98.4 2.1E-07 7E-12 90.6 4.7 44 1-45 1-44 (357)
85 1v59_A Dihydrolipoamide dehydr 98.4 1.2E-07 4.1E-12 97.0 3.2 45 1-45 2-46 (478)
86 1ojt_A Surface protein; redox- 98.4 1.4E-07 4.8E-12 96.7 3.6 44 1-44 3-46 (482)
87 3rp8_A Flavoprotein monooxygen 98.4 2.7E-07 9.2E-12 92.2 5.2 38 3-40 22-59 (407)
88 1mo9_A ORF3; nucleotide bindin 98.3 3E-07 1E-11 95.2 5.6 44 1-44 40-83 (523)
89 2xdo_A TETX2 protein; tetracyc 98.3 3.8E-07 1.3E-11 90.9 6.0 40 3-42 25-64 (398)
90 2qa1_A PGAE, polyketide oxygen 98.3 5.5E-07 1.9E-11 92.7 7.2 41 1-41 8-48 (500)
91 3lzw_A Ferredoxin--NADP reduct 98.3 2.4E-07 8.2E-12 89.4 4.0 41 4-44 7-47 (332)
92 3jsk_A Cypbp37 protein; octame 98.3 3.6E-07 1.2E-11 88.8 5.2 40 4-43 79-120 (344)
93 3lad_A Dihydrolipoamide dehydr 98.3 3.6E-07 1.2E-11 93.5 5.4 57 232-289 221-280 (476)
94 3atr_A Conserved archaeal prot 98.3 1.8E-07 6.2E-12 95.1 3.2 39 1-39 3-41 (453)
95 1zk7_A HGII, reductase, mercur 98.3 3.2E-07 1.1E-11 93.6 5.0 57 232-290 216-272 (467)
96 2qcu_A Aerobic glycerol-3-phos 98.3 4.1E-07 1.4E-11 93.8 5.7 57 231-289 148-210 (501)
97 2r9z_A Glutathione amide reduc 98.3 2.8E-07 9.7E-12 94.0 4.5 43 1-44 1-43 (463)
98 3qfa_A Thioredoxin reductase 1 98.3 3.8E-07 1.3E-11 94.4 4.9 45 2-46 30-82 (519)
99 1ges_A Glutathione reductase; 98.3 3.2E-07 1.1E-11 93.2 4.1 43 1-44 1-43 (450)
100 1dxl_A Dihydrolipoamide dehydr 98.3 5.2E-07 1.8E-11 92.0 5.2 44 2-45 4-47 (470)
101 3alj_A 2-methyl-3-hydroxypyrid 98.3 6.5E-07 2.2E-11 88.6 5.7 38 4-41 11-48 (379)
102 3r9u_A Thioredoxin reductase; 98.3 4.3E-07 1.5E-11 86.9 4.2 43 2-45 2-45 (315)
103 2gjc_A Thiazole biosynthetic e 98.3 5.6E-07 1.9E-11 87.0 4.9 41 3-43 64-106 (326)
104 3pl8_A Pyranose 2-oxidase; sub 98.3 5.8E-07 2E-11 95.0 5.4 44 1-44 43-86 (623)
105 3ic9_A Dihydrolipoamide dehydr 98.3 3.8E-07 1.3E-11 93.8 3.9 43 1-44 4-47 (492)
106 1w4x_A Phenylacetone monooxyge 98.3 5.4E-07 1.8E-11 93.8 4.9 42 3-44 15-56 (542)
107 2qae_A Lipoamide, dihydrolipoy 98.2 4.9E-07 1.7E-11 92.3 4.5 42 4-45 2-43 (468)
108 3d1c_A Flavin-containing putat 98.2 4.7E-07 1.6E-11 88.9 4.1 44 1-46 2-46 (369)
109 3i3l_A Alkylhalidase CMLS; fla 98.2 8.6E-07 2.9E-11 93.1 6.1 56 233-289 129-188 (591)
110 3dk9_A Grase, GR, glutathione 98.2 4.5E-07 1.5E-11 92.8 3.9 42 3-45 19-60 (478)
111 2wpf_A Trypanothione reductase 98.2 4E-07 1.4E-11 93.7 3.5 57 233-290 236-293 (495)
112 3c4n_A Uncharacterized protein 98.2 6.1E-07 2.1E-11 89.7 4.5 56 232-289 172-236 (405)
113 2vou_A 2,6-dihydroxypyridine h 98.2 9.8E-07 3.4E-11 87.9 5.9 39 1-39 1-40 (397)
114 2qa2_A CABE, polyketide oxygen 98.2 1.2E-06 4.2E-11 90.1 6.6 38 3-40 11-48 (499)
115 3dgz_A Thioredoxin reductase 2 98.2 6.7E-07 2.3E-11 91.8 4.7 43 3-45 5-55 (488)
116 2yqu_A 2-oxoglutarate dehydrog 98.2 6.4E-07 2.2E-11 91.1 4.3 42 4-45 1-42 (455)
117 2cul_A Glucose-inhibited divis 98.2 9.9E-07 3.4E-11 81.2 5.2 37 1-38 1-37 (232)
118 2vdc_G Glutamate synthase [NAD 98.2 6.8E-07 2.3E-11 90.9 4.4 42 3-44 121-162 (456)
119 2hqm_A GR, grase, glutathione 98.2 6.1E-07 2.1E-11 91.9 4.1 58 233-290 227-286 (479)
120 1trb_A Thioredoxin reductase; 98.2 6.2E-07 2.1E-11 86.2 3.6 43 1-44 2-44 (320)
121 2gmh_A Electron transfer flavo 98.2 7.3E-07 2.5E-11 93.6 4.4 58 232-289 144-217 (584)
122 2a87_A TRXR, TR, thioredoxin r 98.2 7.6E-07 2.6E-11 86.4 4.3 44 1-45 11-54 (335)
123 1chu_A Protein (L-aspartate ox 98.2 8.9E-07 3E-11 92.0 5.0 39 4-43 8-46 (540)
124 4ap3_A Steroid monooxygenase; 98.2 8.1E-07 2.8E-11 92.5 4.6 45 3-47 20-64 (549)
125 3k30_A Histamine dehydrogenase 98.2 8E-07 2.7E-11 95.2 4.7 43 3-45 390-432 (690)
126 2bry_A NEDD9 interacting prote 98.2 1.3E-06 4.5E-11 89.8 6.1 40 3-42 91-130 (497)
127 1zmd_A Dihydrolipoyl dehydroge 98.2 7.7E-07 2.6E-11 90.9 4.2 43 3-45 5-47 (474)
128 3ihg_A RDME; flavoenzyme, anth 98.2 1.4E-06 4.8E-11 90.4 5.7 40 1-40 1-41 (535)
129 2bs2_A Quinol-fumarate reducta 98.2 9.1E-07 3.1E-11 93.9 4.2 56 232-288 158-219 (660)
130 2a8x_A Dihydrolipoyl dehydroge 98.1 8.2E-07 2.8E-11 90.5 3.6 42 1-44 1-42 (464)
131 3e1t_A Halogenase; flavoprotei 98.1 1.2E-06 4.3E-11 90.3 5.0 56 233-289 112-172 (512)
132 2h88_A Succinate dehydrogenase 98.1 8.2E-07 2.8E-11 93.6 3.6 56 232-288 155-216 (621)
133 3fbs_A Oxidoreductase; structu 98.1 1.3E-06 4.6E-11 82.6 4.8 39 4-42 2-40 (297)
134 3uox_A Otemo; baeyer-villiger 98.1 1.3E-06 4.5E-11 90.9 4.9 43 3-45 8-50 (545)
135 2q0l_A TRXR, thioredoxin reduc 98.1 1.6E-06 5.4E-11 83.0 5.1 40 5-45 2-42 (311)
136 1vdc_A NTR, NADPH dependent th 98.1 9.5E-07 3.3E-11 85.4 3.5 42 4-45 8-53 (333)
137 2xve_A Flavin-containing monoo 98.1 1.6E-06 5.5E-11 88.4 5.3 41 5-45 3-49 (464)
138 3fmw_A Oxygenase; mithramycin, 98.1 1.7E-06 5.9E-11 90.4 5.6 38 3-40 48-85 (570)
139 3gwf_A Cyclohexanone monooxyge 98.1 1.4E-06 4.7E-11 90.6 4.7 44 4-47 8-52 (540)
140 2eq6_A Pyruvate dehydrogenase 98.1 1.1E-06 3.6E-11 89.7 3.8 40 4-44 6-45 (464)
141 3dgh_A TRXR-1, thioredoxin red 98.1 1.5E-06 5E-11 89.1 4.8 58 232-289 227-289 (483)
142 1k0i_A P-hydroxybenzoate hydro 98.1 1.4E-06 4.8E-11 86.5 4.5 36 4-39 2-37 (394)
143 2wdq_A Succinate dehydrogenase 98.1 1.4E-06 4.7E-11 91.5 4.6 57 232-288 143-205 (588)
144 3g3e_A D-amino-acid oxidase; F 98.1 1.3E-06 4.3E-11 85.5 3.7 36 6-41 2-43 (351)
145 2r0c_A REBC; flavin adenine di 98.1 2.1E-06 7.2E-11 89.4 5.5 39 4-42 26-64 (549)
146 1ebd_A E3BD, dihydrolipoamide 98.1 1.5E-06 5.2E-11 88.3 4.3 41 3-44 2-42 (455)
147 4hb9_A Similarities with proba 98.1 2E-06 6.8E-11 85.4 5.0 35 5-39 2-36 (412)
148 1fec_A Trypanothione reductase 98.1 1.6E-06 5.5E-11 89.0 4.4 57 233-290 232-289 (490)
149 2aqj_A Tryptophan halogenase, 98.1 2.7E-06 9.3E-11 88.3 6.0 56 232-288 165-221 (538)
150 2dkh_A 3-hydroxybenzoate hydro 98.1 2.4E-06 8.2E-11 90.7 5.5 39 2-40 30-69 (639)
151 3cp8_A TRNA uridine 5-carboxym 98.1 2.2E-06 7.5E-11 89.9 4.9 39 3-41 20-59 (641)
152 2zxi_A TRNA uridine 5-carboxym 98.1 2.7E-06 9.1E-11 89.1 5.2 54 233-288 124-179 (637)
153 1xdi_A RV3303C-LPDA; reductase 98.0 1.5E-06 5.2E-11 89.4 3.1 56 233-289 224-279 (499)
154 1o94_A Tmadh, trimethylamine d 98.0 2.9E-06 9.9E-11 91.4 5.4 43 3-45 388-430 (729)
155 1d4d_A Flavocytochrome C fumar 98.0 2.9E-06 9.8E-11 88.8 5.2 57 232-289 255-317 (572)
156 1onf_A GR, grase, glutathione 98.0 2.6E-06 8.9E-11 87.7 4.6 59 232-290 217-276 (500)
157 1lvl_A Dihydrolipoamide dehydr 98.0 2E-06 6.9E-11 87.5 3.6 40 4-44 5-44 (458)
158 3ces_A MNMG, tRNA uridine 5-ca 98.0 3.1E-06 1E-10 88.9 4.9 54 233-288 125-180 (651)
159 3c4a_A Probable tryptophan hyd 98.0 3E-06 1E-10 83.9 4.7 35 5-39 1-37 (381)
160 1fl2_A Alkyl hydroperoxide red 98.0 3.4E-06 1.1E-10 80.7 4.8 39 4-44 1-39 (310)
161 3ihm_A Styrene monooxygenase A 98.0 2.9E-06 9.8E-11 85.6 4.3 34 4-37 22-55 (430)
162 4b1b_A TRXR, thioredoxin reduc 98.0 2.9E-06 9.8E-11 88.0 4.0 57 232-289 263-319 (542)
163 3q9t_A Choline dehydrogenase a 98.0 4E-06 1.4E-10 87.6 5.1 37 2-38 4-41 (577)
164 1ju2_A HydroxynitrIle lyase; f 98.0 2.3E-06 8E-11 88.8 3.2 38 3-41 25-62 (536)
165 2ywl_A Thioredoxin reductase r 98.0 4.8E-06 1.6E-10 73.1 4.7 33 5-37 2-34 (180)
166 2gag_A Heterotetrameric sarcos 98.0 3E-06 1E-10 94.0 4.0 42 3-44 127-168 (965)
167 1y56_A Hypothetical protein PH 98.0 2.3E-06 7.9E-11 87.9 2.9 42 3-45 107-148 (493)
168 3t37_A Probable dehydrogenase; 98.0 3.9E-06 1.3E-10 86.8 4.5 37 3-39 16-53 (526)
169 3s5w_A L-ornithine 5-monooxyge 98.0 4E-06 1.4E-10 85.1 4.5 41 3-43 29-74 (463)
170 1ps9_A 2,4-dienoyl-COA reducta 98.0 5.8E-06 2E-10 88.2 5.8 42 3-44 372-413 (671)
171 2pyx_A Tryptophan halogenase; 98.0 4.5E-06 1.5E-10 86.4 4.8 56 232-288 175-232 (526)
172 2e5v_A L-aspartate oxidase; ar 98.0 5.5E-06 1.9E-10 84.6 5.4 55 232-288 119-175 (472)
173 3g5s_A Methylenetetrahydrofola 98.0 6.6E-06 2.3E-10 80.8 5.6 39 5-43 2-40 (443)
174 2e4g_A Tryptophan halogenase; 98.0 5.9E-06 2E-10 86.1 5.6 56 232-288 194-251 (550)
175 1kf6_A Fumarate reductase flav 97.9 4.4E-06 1.5E-10 87.9 4.4 56 232-288 134-196 (602)
176 1kdg_A CDH, cellobiose dehydro 97.9 7E-06 2.4E-10 85.4 5.1 37 3-39 6-42 (546)
177 3qvp_A Glucose oxidase; oxidor 97.9 7.5E-06 2.6E-10 85.6 5.1 35 3-37 18-53 (583)
178 3gyx_A Adenylylsulfate reducta 97.9 7.1E-06 2.4E-10 87.1 4.8 55 232-286 166-230 (662)
179 1jnr_A Adenylylsulfate reducta 97.9 9.7E-06 3.3E-10 86.0 5.4 54 233-287 152-216 (643)
180 2x8g_A Thioredoxin glutathione 97.9 7.7E-06 2.6E-10 86.0 4.3 41 3-43 106-154 (598)
181 1gte_A Dihydropyrimidine dehyd 97.8 1E-05 3.6E-10 90.2 5.5 40 4-43 187-227 (1025)
182 1hyu_A AHPF, alkyl hydroperoxi 97.8 1.1E-05 3.6E-10 83.5 5.1 40 3-44 211-250 (521)
183 1q1r_A Putidaredoxin reductase 97.8 1.3E-05 4.5E-10 80.8 5.6 59 232-290 191-251 (431)
184 2weu_A Tryptophan 5-halogenase 97.8 7.7E-06 2.6E-10 84.2 3.5 56 232-288 173-229 (511)
185 1lqt_A FPRA; NADP+ derivative, 97.8 9E-06 3.1E-10 82.6 3.8 41 4-44 3-50 (456)
186 1pn0_A Phenol 2-monooxygenase; 97.8 1.5E-05 5E-10 84.9 4.9 36 4-39 8-48 (665)
187 2v3a_A Rubredoxin reductase; a 97.8 1.6E-05 5.4E-10 78.8 4.8 57 232-290 187-244 (384)
188 1cjc_A Protein (adrenodoxin re 97.8 1.4E-05 4.7E-10 81.4 4.5 42 3-44 5-48 (460)
189 3kd9_A Coenzyme A disulfide re 97.7 1.7E-05 5.9E-10 80.3 4.8 54 233-289 191-244 (449)
190 3h28_A Sulfide-quinone reducta 97.7 1.8E-05 6.3E-10 79.6 4.2 39 5-43 3-43 (430)
191 1coy_A Cholesterol oxidase; ox 97.7 2.6E-05 9E-10 80.3 5.0 38 2-39 9-46 (507)
192 1n4w_A CHOD, cholesterol oxida 97.7 2.7E-05 9.3E-10 80.1 5.0 38 3-40 4-41 (504)
193 1m6i_A Programmed cell death p 97.7 2.9E-05 9.9E-10 79.7 5.0 56 233-290 227-283 (493)
194 3fim_B ARYL-alcohol oxidase; A 97.7 2E-05 6.7E-10 82.2 3.8 38 4-41 2-40 (566)
195 2cdu_A NADPH oxidase; flavoenz 97.7 2.8E-05 9.6E-10 78.8 4.8 58 231-289 190-247 (452)
196 3sx6_A Sulfide-quinone reducta 97.7 2.3E-05 7.8E-10 79.1 4.1 40 1-40 1-43 (437)
197 2gqw_A Ferredoxin reductase; f 97.6 3.4E-05 1.1E-09 77.2 5.0 53 232-290 187-240 (408)
198 3h8l_A NADH oxidase; membrane 97.6 2.5E-05 8.6E-10 77.9 3.5 54 232-290 218-271 (409)
199 2jbv_A Choline oxidase; alcoho 97.6 4.2E-05 1.4E-09 79.5 5.1 39 3-41 12-51 (546)
200 3ics_A Coenzyme A-disulfide re 97.6 4.5E-05 1.5E-09 80.0 4.9 55 232-289 228-282 (588)
201 1nhp_A NADH peroxidase; oxidor 97.6 4.6E-05 1.6E-09 77.0 4.7 56 232-289 191-246 (447)
202 2bc0_A NADH oxidase; flavoprot 97.5 4.6E-05 1.6E-09 78.0 4.3 57 232-290 236-292 (490)
203 3ef6_A Toluene 1,2-dioxygenase 97.5 7.4E-05 2.5E-09 74.7 5.4 57 232-290 185-242 (410)
204 3cgb_A Pyridine nucleotide-dis 97.5 5.7E-05 2E-09 77.1 4.6 56 232-289 227-282 (480)
205 1gpe_A Protein (glucose oxidas 97.5 6.5E-05 2.2E-09 78.7 5.0 38 3-40 23-61 (587)
206 1xhc_A NADH oxidase /nitrite r 97.5 8.1E-05 2.8E-09 73.3 4.8 35 5-40 9-43 (367)
207 3ntd_A FAD-dependent pyridine 97.4 9.5E-05 3.3E-09 77.0 4.5 58 232-289 192-267 (565)
208 3klj_A NAD(FAD)-dependent dehy 97.2 0.00024 8.2E-09 70.4 5.3 39 3-41 8-46 (385)
209 4g6h_A Rotenone-insensitive NA 97.2 0.00019 6.5E-09 73.7 4.5 35 4-38 42-76 (502)
210 3vrd_B FCCB subunit, flavocyto 97.2 0.0002 7E-09 71.0 3.9 39 5-43 3-43 (401)
211 4eqs_A Coenzyme A disulfide re 97.1 0.00032 1.1E-08 70.7 4.7 53 232-289 188-240 (437)
212 3hyw_A Sulfide-quinone reducta 97.1 0.00031 1.1E-08 70.6 4.1 37 1-39 1-39 (430)
213 4b63_A L-ornithine N5 monooxyg 97.1 9E-05 3.1E-09 76.1 0.2 39 3-41 38-76 (501)
214 1nhp_A NADH peroxidase; oxidor 96.1 0.0059 2E-07 61.4 5.8 40 3-42 148-187 (447)
215 3klj_A NAD(FAD)-dependent dehy 96.0 0.0052 1.8E-07 60.7 4.8 38 5-42 147-184 (385)
216 4gcm_A TRXR, thioredoxin reduc 95.8 0.0075 2.6E-07 57.2 4.8 37 5-41 146-182 (312)
217 1lss_A TRK system potassium up 95.8 0.0094 3.2E-07 49.1 4.9 33 5-37 5-37 (140)
218 2g1u_A Hypothetical protein TM 95.7 0.012 3.9E-07 50.0 5.0 34 5-38 20-53 (155)
219 3fwz_A Inner membrane protein 95.6 0.011 3.8E-07 49.2 4.8 33 5-37 8-40 (140)
220 3llv_A Exopolyphosphatase-rela 95.6 0.013 4.4E-07 48.7 5.0 33 5-37 7-39 (141)
221 2v3a_A Rubredoxin reductase; a 95.5 0.012 4.2E-07 57.7 5.5 39 4-42 145-183 (384)
222 1lvl_A Dihydrolipoamide dehydr 95.5 0.0094 3.2E-07 60.2 4.6 37 5-41 172-208 (458)
223 2eq6_A Pyruvate dehydrogenase 95.5 0.012 4.2E-07 59.4 5.2 37 5-41 170-206 (464)
224 1xhc_A NADH oxidase /nitrite r 95.4 0.012 4E-07 57.7 4.8 37 5-41 144-180 (367)
225 1ebd_A E3BD, dihydrolipoamide 95.4 0.013 4.4E-07 59.0 5.3 37 5-41 171-207 (455)
226 1v59_A Dihydrolipoamide dehydr 95.4 0.014 4.8E-07 59.1 5.4 38 5-42 184-221 (478)
227 2yqu_A 2-oxoglutarate dehydrog 95.4 0.013 4.5E-07 59.0 5.0 37 5-41 168-204 (455)
228 4e12_A Diketoreductase; oxidor 95.3 0.017 5.9E-07 54.3 5.2 38 1-38 1-38 (283)
229 4a5l_A Thioredoxin reductase; 95.2 0.015 5.3E-07 54.8 4.7 35 5-39 153-187 (314)
230 2gqw_A Ferredoxin reductase; f 95.2 0.02 6.7E-07 56.9 5.5 39 4-42 145-183 (408)
231 3ado_A Lambda-crystallin; L-gu 95.1 0.013 4.4E-07 56.1 3.9 34 5-38 7-40 (319)
232 1id1_A Putative potassium chan 95.1 0.024 8.1E-07 47.9 5.2 33 5-37 4-36 (153)
233 3ic5_A Putative saccharopine d 95.1 0.021 7.3E-07 45.3 4.6 33 5-37 6-39 (118)
234 1ges_A Glutathione reductase; 95.1 0.018 6.1E-07 57.9 5.0 37 5-41 168-204 (450)
235 1f0y_A HCDH, L-3-hydroxyacyl-C 94.8 0.027 9.1E-07 53.4 5.2 32 6-37 17-48 (302)
236 2r9z_A Glutathione amide reduc 94.8 0.024 8.2E-07 57.2 5.0 37 5-41 167-203 (463)
237 3cgb_A Pyridine nucleotide-dis 94.7 0.019 6.5E-07 58.2 4.0 38 4-41 186-223 (480)
238 3qha_A Putative oxidoreductase 94.7 0.025 8.7E-07 53.5 4.6 38 1-38 12-49 (296)
239 2bc0_A NADH oxidase; flavoprot 94.6 0.028 9.7E-07 57.1 5.2 37 5-41 195-231 (490)
240 1zmd_A Dihydrolipoyl dehydroge 94.6 0.03 1E-06 56.6 5.2 37 5-41 179-215 (474)
241 1q1r_A Putidaredoxin reductase 94.6 0.033 1.1E-06 55.7 5.3 39 4-42 149-187 (431)
242 2a8x_A Dihydrolipoyl dehydroge 94.5 0.03 1E-06 56.4 5.0 37 5-41 172-208 (464)
243 3c85_A Putative glutathione-re 94.5 0.028 9.5E-07 48.9 4.2 33 5-37 40-73 (183)
244 1ojt_A Surface protein; redox- 94.5 0.025 8.7E-07 57.3 4.5 37 5-41 186-222 (482)
245 3ic9_A Dihydrolipoamide dehydr 94.5 0.034 1.2E-06 56.6 5.4 38 5-42 175-212 (492)
246 2ewd_A Lactate dehydrogenase,; 94.5 0.031 1.1E-06 53.5 4.8 37 1-37 1-38 (317)
247 2hmt_A YUAA protein; RCK, KTN, 94.4 0.032 1.1E-06 45.9 4.2 33 5-37 7-39 (144)
248 2q0l_A TRXR, thioredoxin reduc 94.3 0.036 1.2E-06 52.2 4.9 36 5-40 144-179 (311)
249 3kd9_A Coenzyme A disulfide re 94.3 0.042 1.4E-06 55.1 5.5 38 5-42 149-186 (449)
250 1bg6_A N-(1-D-carboxylethyl)-L 94.3 0.035 1.2E-06 53.7 4.8 37 1-37 1-37 (359)
251 3d1c_A Flavin-containing putat 94.3 0.033 1.1E-06 53.9 4.5 36 5-40 167-202 (369)
252 2dpo_A L-gulonate 3-dehydrogen 94.3 0.035 1.2E-06 53.2 4.5 34 5-38 7-40 (319)
253 3ef6_A Toluene 1,2-dioxygenase 94.2 0.047 1.6E-06 54.1 5.6 39 4-42 143-181 (410)
254 3i83_A 2-dehydropantoate 2-red 94.2 0.04 1.4E-06 52.7 4.9 33 5-37 3-35 (320)
255 3gwf_A Cyclohexanone monooxyge 94.2 0.038 1.3E-06 57.0 5.0 34 5-38 179-212 (540)
256 2hqm_A GR, grase, glutathione 94.2 0.04 1.4E-06 55.9 5.0 37 5-41 186-222 (479)
257 1dxl_A Dihydrolipoamide dehydr 94.2 0.026 9E-07 56.9 3.6 37 5-41 178-214 (470)
258 1onf_A GR, grase, glutathione 94.1 0.04 1.4E-06 56.2 5.0 37 5-41 177-213 (500)
259 1fl2_A Alkyl hydroperoxide red 94.1 0.04 1.4E-06 51.9 4.6 36 5-40 145-180 (310)
260 3l4b_C TRKA K+ channel protien 94.1 0.037 1.3E-06 49.6 4.1 32 6-37 2-33 (218)
261 3hn2_A 2-dehydropantoate 2-red 94.0 0.041 1.4E-06 52.4 4.5 33 5-37 3-35 (312)
262 4eqs_A Coenzyme A disulfide re 94.0 0.04 1.4E-06 55.2 4.6 37 5-41 148-184 (437)
263 2raf_A Putative dinucleotide-b 94.0 0.053 1.8E-06 48.5 4.9 34 5-38 20-53 (209)
264 1ks9_A KPA reductase;, 2-dehyd 93.9 0.048 1.6E-06 51.0 4.7 33 6-38 2-34 (291)
265 1vdc_A NTR, NADPH dependent th 93.9 0.048 1.6E-06 51.9 4.8 36 5-40 160-195 (333)
266 3uox_A Otemo; baeyer-villiger 93.9 0.043 1.5E-06 56.7 4.7 35 5-39 186-220 (545)
267 2q7v_A Thioredoxin reductase; 93.9 0.052 1.8E-06 51.6 5.0 36 5-40 153-188 (325)
268 2qae_A Lipoamide, dihydrolipoy 93.9 0.049 1.7E-06 54.9 5.0 37 5-41 175-211 (468)
269 1zk7_A HGII, reductase, mercur 93.9 0.049 1.7E-06 54.9 5.0 37 5-41 177-213 (467)
270 2y0c_A BCEC, UDP-glucose dehyd 93.8 0.048 1.6E-06 55.3 4.8 33 5-37 9-41 (478)
271 1trb_A Thioredoxin reductase; 93.8 0.051 1.7E-06 51.3 4.7 36 5-40 146-181 (320)
272 2a87_A TRXR, TR, thioredoxin r 93.8 0.051 1.8E-06 51.9 4.8 36 5-40 156-191 (335)
273 3fg2_P Putative rubredoxin red 93.8 0.059 2E-06 53.2 5.3 39 5-43 143-181 (404)
274 3lxd_A FAD-dependent pyridine 93.7 0.064 2.2E-06 53.1 5.5 39 4-42 152-190 (415)
275 4ap3_A Steroid monooxygenase; 93.7 0.042 1.4E-06 56.8 4.3 35 5-39 192-226 (549)
276 2xve_A Flavin-containing monoo 93.7 0.05 1.7E-06 54.9 4.7 37 5-41 198-234 (464)
277 3gg2_A Sugar dehydrogenase, UD 93.7 0.052 1.8E-06 54.6 4.8 33 5-37 3-35 (450)
278 2zbw_A Thioredoxin reductase; 93.7 0.059 2E-06 51.3 4.9 37 5-41 153-189 (335)
279 3lk7_A UDP-N-acetylmuramoylala 93.7 0.058 2E-06 54.3 5.1 34 5-38 10-43 (451)
280 3g79_A NDP-N-acetyl-D-galactos 93.7 0.049 1.7E-06 55.1 4.5 35 4-38 18-54 (478)
281 1t2d_A LDH-P, L-lactate dehydr 93.6 0.067 2.3E-06 51.3 5.2 37 1-37 1-38 (322)
282 3ghy_A Ketopantoate reductase 93.6 0.054 1.9E-06 52.1 4.5 36 1-37 1-36 (335)
283 3doj_A AT3G25530, dehydrogenas 93.5 0.071 2.4E-06 50.7 5.1 34 5-38 22-55 (310)
284 2gv8_A Monooxygenase; FMO, FAD 93.5 0.056 1.9E-06 54.1 4.6 35 5-39 213-248 (447)
285 3ntd_A FAD-dependent pyridine 93.5 0.066 2.2E-06 55.3 5.2 37 5-41 152-188 (565)
286 3cky_A 2-hydroxymethyl glutara 93.4 0.064 2.2E-06 50.5 4.7 37 1-37 1-37 (301)
287 4e21_A 6-phosphogluconate dehy 93.3 0.068 2.3E-06 52.0 4.8 37 1-37 19-55 (358)
288 3mog_A Probable 3-hydroxybutyr 93.3 0.067 2.3E-06 54.3 4.9 35 4-38 5-39 (483)
289 2ew2_A 2-dehydropantoate 2-red 93.3 0.066 2.3E-06 50.6 4.6 33 5-37 4-36 (316)
290 3k96_A Glycerol-3-phosphate de 93.3 0.07 2.4E-06 51.9 4.8 33 5-37 30-62 (356)
291 3cty_A Thioredoxin reductase; 93.3 0.066 2.3E-06 50.6 4.6 36 5-40 156-191 (319)
292 3l8k_A Dihydrolipoyl dehydroge 93.3 0.08 2.8E-06 53.3 5.4 38 5-42 173-210 (466)
293 3oc4_A Oxidoreductase, pyridin 93.3 0.082 2.8E-06 53.0 5.5 38 5-42 148-185 (452)
294 3urh_A Dihydrolipoyl dehydroge 93.3 0.067 2.3E-06 54.3 4.8 37 5-41 199-235 (491)
295 1zej_A HBD-9, 3-hydroxyacyl-CO 93.3 0.071 2.4E-06 50.4 4.6 32 5-37 13-44 (293)
296 1pzg_A LDH, lactate dehydrogen 93.3 0.073 2.5E-06 51.2 4.8 33 5-37 10-43 (331)
297 3dk9_A Grase, GR, glutathione 93.2 0.073 2.5E-06 53.8 5.0 36 5-40 188-223 (478)
298 2x5o_A UDP-N-acetylmuramoylala 93.2 0.059 2E-06 54.0 4.2 36 5-40 6-41 (439)
299 4a7p_A UDP-glucose dehydrogena 93.2 0.076 2.6E-06 53.3 4.9 34 5-38 9-42 (446)
300 3k6j_A Protein F01G10.3, confi 93.1 0.07 2.4E-06 53.6 4.6 34 5-38 55-88 (460)
301 2q3e_A UDP-glucose 6-dehydroge 93.0 0.069 2.3E-06 54.0 4.4 37 1-37 2-40 (467)
302 3itj_A Thioredoxin reductase 1 92.9 0.085 2.9E-06 50.0 4.7 37 5-41 174-210 (338)
303 3dtt_A NADP oxidoreductase; st 92.9 0.098 3.3E-06 47.9 4.9 33 5-37 20-52 (245)
304 1z82_A Glycerol-3-phosphate de 92.9 0.089 3E-06 50.6 4.8 34 4-37 14-47 (335)
305 3lad_A Dihydrolipoamide dehydr 92.9 0.095 3.3E-06 52.9 5.2 37 5-41 181-217 (476)
306 3ab1_A Ferredoxin--NADP reduct 92.8 0.089 3E-06 50.7 4.8 37 5-41 164-200 (360)
307 1mv8_A GMD, GDP-mannose 6-dehy 92.8 0.077 2.6E-06 53.1 4.4 32 6-37 2-33 (436)
308 1zcj_A Peroxisomal bifunctiona 92.8 0.08 2.7E-06 53.5 4.5 33 5-37 38-70 (463)
309 3g17_A Similar to 2-dehydropan 92.7 0.064 2.2E-06 50.6 3.5 33 5-37 3-35 (294)
310 2cdu_A NADPH oxidase; flavoenz 92.7 0.16 5.3E-06 50.9 6.6 37 5-41 1-39 (452)
311 3pef_A 6-phosphogluconate dehy 92.7 0.091 3.1E-06 49.2 4.5 33 6-38 3-35 (287)
312 3g0o_A 3-hydroxyisobutyrate de 92.7 0.098 3.4E-06 49.5 4.8 34 4-37 7-40 (303)
313 3s5w_A L-ornithine 5-monooxyge 92.7 0.07 2.4E-06 53.5 3.9 36 4-39 227-264 (463)
314 2x8g_A Thioredoxin glutathione 92.6 0.09 3.1E-06 54.8 4.8 32 5-36 287-318 (598)
315 3l6d_A Putative oxidoreductase 92.5 0.12 4.3E-06 48.9 5.2 34 4-37 9-42 (306)
316 2uyy_A N-PAC protein; long-cha 92.4 0.12 4.2E-06 49.0 5.2 35 4-38 30-64 (316)
317 3ics_A Coenzyme A-disulfide re 92.4 0.12 4.1E-06 53.7 5.4 38 5-42 188-225 (588)
318 1lld_A L-lactate dehydrogenase 92.4 0.11 3.6E-06 49.5 4.6 33 5-37 8-42 (319)
319 3oj0_A Glutr, glutamyl-tRNA re 92.4 0.07 2.4E-06 44.4 2.9 33 5-37 22-54 (144)
320 4g65_A TRK system potassium up 92.3 0.079 2.7E-06 53.5 3.7 33 5-37 4-36 (461)
321 2vns_A Metalloreductase steap3 92.3 0.13 4.6E-06 46.0 4.9 33 5-37 29-61 (215)
322 3hwr_A 2-dehydropantoate 2-red 92.3 0.12 4E-06 49.4 4.7 32 5-37 20-51 (318)
323 1hyu_A AHPF, alkyl hydroperoxi 92.2 0.091 3.1E-06 53.9 4.1 37 5-41 356-392 (521)
324 3pdu_A 3-hydroxyisobutyrate de 92.2 0.091 3.1E-06 49.3 3.8 33 6-38 3-35 (287)
325 4dio_A NAD(P) transhydrogenase 92.2 0.12 4.1E-06 50.9 4.7 34 5-38 191-224 (405)
326 2gmh_A Electron transfer flavo 92.2 0.35 1.2E-05 50.3 8.6 39 4-42 35-79 (584)
327 2qyt_A 2-dehydropantoate 2-red 92.2 0.083 2.8E-06 50.0 3.5 36 1-36 4-46 (317)
328 4gbj_A 6-phosphogluconate dehy 92.1 0.11 3.8E-06 49.1 4.3 36 1-38 4-39 (297)
329 1jay_A Coenzyme F420H2:NADP+ o 92.1 0.14 4.7E-06 45.5 4.7 32 6-37 2-34 (212)
330 3vtf_A UDP-glucose 6-dehydroge 92.1 0.11 3.9E-06 51.8 4.4 33 5-37 22-54 (444)
331 3f8d_A Thioredoxin reductase ( 92.1 0.12 4.3E-06 48.4 4.6 37 5-41 155-191 (323)
332 2hjr_A Malate dehydrogenase; m 92.0 0.13 4.4E-06 49.4 4.7 33 5-37 15-48 (328)
333 4dll_A 2-hydroxy-3-oxopropiona 92.0 0.14 4.6E-06 49.0 4.8 33 5-37 32-64 (320)
334 3eag_A UDP-N-acetylmuramate:L- 91.9 0.16 5.6E-06 48.6 5.3 34 5-38 5-39 (326)
335 3pid_A UDP-glucose 6-dehydroge 91.9 0.13 4.4E-06 51.3 4.6 33 5-38 37-69 (432)
336 1txg_A Glycerol-3-phosphate de 91.9 0.11 3.7E-06 49.7 4.0 30 6-35 2-31 (335)
337 4b1b_A TRXR, thioredoxin reduc 91.8 0.13 4.6E-06 52.9 4.8 36 5-40 224-259 (542)
338 1evy_A Glycerol-3-phosphate de 91.8 0.091 3.1E-06 51.1 3.4 32 6-37 17-48 (366)
339 2v6b_A L-LDH, L-lactate dehydr 91.8 0.14 4.7E-06 48.6 4.6 32 6-37 2-35 (304)
340 2pv7_A T-protein [includes: ch 91.8 0.14 4.8E-06 48.3 4.6 33 6-38 23-56 (298)
341 3tl2_A Malate dehydrogenase; c 91.7 0.17 5.7E-06 48.3 5.1 34 4-37 8-42 (315)
342 3ego_A Probable 2-dehydropanto 91.7 0.15 5E-06 48.5 4.7 32 5-37 3-34 (307)
343 1d4d_A Flavocytochrome C fumar 91.7 0.41 1.4E-05 49.5 8.5 42 3-44 125-166 (572)
344 3c24_A Putative oxidoreductase 91.7 0.15 5E-06 47.8 4.6 33 5-37 12-45 (286)
345 1kyq_A Met8P, siroheme biosynt 91.7 0.11 3.7E-06 48.5 3.7 35 4-38 13-47 (274)
346 3dgz_A Thioredoxin reductase 2 91.7 0.17 5.9E-06 51.2 5.4 34 5-38 186-219 (488)
347 3r9u_A Thioredoxin reductase; 91.6 0.15 5.1E-06 47.7 4.6 35 5-39 148-182 (315)
348 3ojo_A CAP5O; rossmann fold, c 91.6 0.13 4.6E-06 51.2 4.4 33 6-38 13-45 (431)
349 2ywl_A Thioredoxin reductase r 91.6 0.49 1.7E-05 40.4 7.6 55 232-290 56-111 (180)
350 2h78_A Hibadh, 3-hydroxyisobut 91.6 0.15 5.2E-06 48.0 4.6 33 5-37 4-36 (302)
351 1dlj_A UDP-glucose dehydrogena 91.6 0.13 4.5E-06 50.8 4.3 31 6-37 2-32 (402)
352 3iwa_A FAD-dependent pyridine 91.5 0.14 4.7E-06 51.7 4.5 37 5-41 160-197 (472)
353 3lzw_A Ferredoxin--NADP reduct 91.5 0.17 5.7E-06 47.8 4.8 38 5-42 155-192 (332)
354 3qfa_A Thioredoxin reductase 1 91.5 0.18 6.3E-06 51.5 5.4 32 5-36 211-242 (519)
355 3p2y_A Alanine dehydrogenase/p 91.5 0.13 4.4E-06 50.3 4.0 33 5-37 185-217 (381)
356 4huj_A Uncharacterized protein 91.5 0.088 3E-06 47.3 2.7 33 5-37 24-57 (220)
357 3dhn_A NAD-dependent epimerase 91.4 0.15 5E-06 45.6 4.1 38 1-38 1-39 (227)
358 4ezb_A Uncharacterized conserv 91.3 0.14 4.9E-06 48.8 4.2 33 5-37 25-58 (317)
359 2izz_A Pyrroline-5-carboxylate 91.3 0.16 5.4E-06 48.6 4.5 34 4-37 22-59 (322)
360 3dfz_A SIRC, precorrin-2 dehyd 91.3 0.2 6.9E-06 45.2 4.8 33 4-36 31-63 (223)
361 2aef_A Calcium-gated potassium 91.2 0.1 3.5E-06 47.2 2.9 34 4-38 9-42 (234)
362 3l9w_A Glutathione-regulated p 91.2 0.19 6.3E-06 49.9 5.0 35 4-38 4-38 (413)
363 2weu_A Tryptophan 5-halogenase 91.1 0.47 1.6E-05 48.2 8.1 35 4-38 2-39 (511)
364 1fec_A Trypanothione reductase 91.1 0.35 1.2E-05 49.0 7.1 43 3-45 2-53 (490)
365 1xdi_A RV3303C-LPDA; reductase 91.1 0.33 1.1E-05 49.2 6.9 41 4-45 2-45 (499)
366 1guz_A Malate dehydrogenase; o 91.0 0.19 6.5E-06 47.7 4.7 32 6-37 2-35 (310)
367 3qsg_A NAD-binding phosphogluc 91.0 0.16 5.4E-06 48.4 4.1 32 5-36 25-57 (312)
368 2vdc_G Glutamate synthase [NAD 90.9 0.18 6.3E-06 50.7 4.7 35 5-39 265-300 (456)
369 2wpf_A Trypanothione reductase 90.9 0.4 1.4E-05 48.7 7.2 45 1-45 4-57 (495)
370 2zyd_A 6-phosphogluconate dehy 90.9 0.19 6.5E-06 50.9 4.7 34 4-37 15-48 (480)
371 2e4g_A Tryptophan halogenase; 90.9 0.5 1.7E-05 48.6 8.0 38 1-38 21-62 (550)
372 3o0h_A Glutathione reductase; 90.8 0.36 1.2E-05 48.8 6.8 42 3-45 25-66 (484)
373 3ktd_A Prephenate dehydrogenas 90.7 0.2 6.9E-06 48.3 4.6 33 5-37 9-41 (341)
374 3fbs_A Oxidoreductase; structu 90.7 0.2 7E-06 46.3 4.5 33 5-38 142-174 (297)
375 2wtb_A MFP2, fatty acid multif 90.7 0.18 6.1E-06 53.8 4.5 32 6-37 314-345 (725)
376 3gpi_A NAD-dependent epimerase 90.7 0.26 9E-06 45.7 5.2 37 1-38 1-37 (286)
377 2rcy_A Pyrroline carboxylate r 90.7 0.19 6.4E-06 46.2 4.1 37 1-38 2-42 (262)
378 2wdq_A Succinate dehydrogenase 90.6 0.46 1.6E-05 49.4 7.5 41 3-43 6-46 (588)
379 3ggo_A Prephenate dehydrogenas 90.6 0.22 7.4E-06 47.5 4.6 33 5-37 34-68 (314)
380 3dgh_A TRXR-1, thioredoxin red 90.6 0.26 8.7E-06 49.8 5.4 33 5-37 188-220 (483)
381 2gf2_A Hibadh, 3-hydroxyisobut 90.5 0.22 7.5E-06 46.6 4.6 32 6-37 2-33 (296)
382 2f1k_A Prephenate dehydrogenas 90.5 0.22 7.7E-06 46.2 4.6 32 6-37 2-33 (279)
383 1y6j_A L-lactate dehydrogenase 90.5 0.25 8.5E-06 47.2 4.9 34 4-37 7-42 (318)
384 3dfu_A Uncharacterized protein 90.5 0.11 3.8E-06 47.2 2.3 33 5-37 7-39 (232)
385 1yqg_A Pyrroline-5-carboxylate 90.4 0.19 6.6E-06 46.1 4.0 32 6-37 2-34 (263)
386 2iz1_A 6-phosphogluconate dehy 90.4 0.24 8.4E-06 50.0 5.1 36 1-37 3-38 (474)
387 2qcu_A Aerobic glycerol-3-phos 90.4 0.34 1.2E-05 49.2 6.2 40 2-41 1-40 (501)
388 2o3j_A UDP-glucose 6-dehydroge 90.4 0.18 6.2E-06 51.1 4.1 33 5-37 10-44 (481)
389 1x0v_A GPD-C, GPDH-C, glycerol 90.4 0.14 4.7E-06 49.5 3.1 34 5-38 9-49 (354)
390 4dna_A Probable glutathione re 90.3 0.39 1.3E-05 48.1 6.5 56 232-289 211-268 (463)
391 1nyt_A Shikimate 5-dehydrogena 90.2 0.25 8.7E-06 45.9 4.7 33 5-37 120-152 (271)
392 1mo9_A ORF3; nucleotide bindin 90.2 0.43 1.5E-05 48.8 6.8 59 232-290 255-317 (523)
393 2p4q_A 6-phosphogluconate dehy 90.1 0.26 8.7E-06 50.2 4.9 33 5-37 11-43 (497)
394 4gwg_A 6-phosphogluconate dehy 90.0 0.28 9.5E-06 49.7 5.0 34 4-37 4-37 (484)
395 1x13_A NAD(P) transhydrogenase 90.0 0.24 8.4E-06 48.9 4.5 34 5-38 173-206 (401)
396 2cul_A Glucose-inhibited divis 90.0 0.62 2.1E-05 41.9 7.0 56 232-289 68-125 (232)
397 1hdo_A Biliverdin IX beta redu 89.9 0.36 1.2E-05 42.0 5.2 36 1-37 1-37 (206)
398 1vpd_A Tartronate semialdehyde 89.9 0.26 8.9E-06 46.2 4.5 33 5-37 6-38 (299)
399 3atr_A Conserved archaeal prot 89.9 0.56 1.9E-05 46.8 7.2 56 232-288 100-161 (453)
400 3c7a_A Octopine dehydrogenase; 89.8 0.18 6.2E-06 49.7 3.5 30 5-34 3-33 (404)
401 1a5z_A L-lactate dehydrogenase 89.8 0.22 7.7E-06 47.5 4.0 32 6-37 2-35 (319)
402 1yj8_A Glycerol-3-phosphate de 89.8 0.18 6.1E-06 49.3 3.4 33 6-38 23-62 (375)
403 2pgd_A 6-phosphogluconate dehy 89.8 0.28 9.7E-06 49.7 4.9 33 5-37 3-35 (482)
404 3d1l_A Putative NADP oxidoredu 89.8 0.25 8.4E-06 45.6 4.2 33 5-37 11-44 (266)
405 1ur5_A Malate dehydrogenase; o 89.6 0.3 1E-05 46.3 4.7 33 5-37 3-36 (309)
406 2g5c_A Prephenate dehydrogenas 89.6 0.3 1E-05 45.4 4.6 32 6-37 3-36 (281)
407 1jw9_B Molybdopterin biosynthe 89.6 0.25 8.6E-06 45.3 4.0 33 5-37 32-65 (249)
408 1wdk_A Fatty oxidation complex 89.6 0.21 7.2E-06 53.2 3.9 33 5-37 315-347 (715)
409 3ius_A Uncharacterized conserv 89.5 0.33 1.1E-05 44.9 4.9 33 5-37 6-38 (286)
410 3pqe_A L-LDH, L-lactate dehydr 89.5 0.3 1E-05 46.8 4.6 34 4-37 5-40 (326)
411 1cjc_A Protein (adrenodoxin re 89.5 0.27 9.3E-06 49.4 4.6 35 5-39 146-201 (460)
412 1hyh_A L-hicdh, L-2-hydroxyiso 89.5 0.24 8.3E-06 46.9 4.0 32 6-37 3-36 (309)
413 1m6i_A Programmed cell death p 89.5 0.44 1.5E-05 48.3 6.2 40 1-40 8-49 (493)
414 3phh_A Shikimate dehydrogenase 89.4 0.33 1.1E-05 45.1 4.7 33 5-37 119-151 (269)
415 1l7d_A Nicotinamide nucleotide 89.4 0.31 1.1E-05 47.8 4.7 33 5-37 173-205 (384)
416 1pgj_A 6PGDH, 6-PGDH, 6-phosph 89.3 0.29 9.9E-06 49.5 4.6 32 6-37 3-34 (478)
417 1pjc_A Protein (L-alanine dehy 89.3 0.33 1.1E-05 47.1 4.9 33 5-37 168-200 (361)
418 2cvz_A Dehydrogenase, 3-hydrox 89.3 0.29 1E-05 45.5 4.3 31 6-37 3-33 (289)
419 2ahr_A Putative pyrroline carb 89.3 0.33 1.1E-05 44.4 4.6 33 5-37 4-36 (259)
420 2a9f_A Putative malic enzyme ( 89.2 0.31 1.1E-05 47.6 4.5 34 4-37 188-222 (398)
421 3c4n_A Uncharacterized protein 89.2 0.21 7.2E-06 49.1 3.4 39 4-42 36-76 (405)
422 1o94_A Tmadh, trimethylamine d 89.2 0.29 9.9E-06 52.3 4.7 36 5-41 529-566 (729)
423 1p77_A Shikimate 5-dehydrogena 89.1 0.28 9.7E-06 45.6 4.0 33 5-37 120-152 (272)
424 4ffl_A PYLC; amino acid, biosy 89.0 0.37 1.3E-05 46.6 5.0 33 6-38 3-35 (363)
425 3gvi_A Malate dehydrogenase; N 89.0 0.39 1.3E-05 45.9 5.0 33 5-37 8-41 (324)
426 2eez_A Alanine dehydrogenase; 89.0 0.36 1.2E-05 47.0 4.9 33 5-37 167-199 (369)
427 3ew7_A LMO0794 protein; Q8Y8U8 88.9 0.42 1.4E-05 42.1 5.0 32 6-37 2-34 (221)
428 2gag_A Heterotetrameric sarcos 88.9 0.22 7.7E-06 55.0 3.7 38 5-42 285-322 (965)
429 1np3_A Ketol-acid reductoisome 88.8 0.36 1.2E-05 46.4 4.7 33 5-37 17-49 (338)
430 3tri_A Pyrroline-5-carboxylate 88.6 0.44 1.5E-05 44.5 5.0 36 1-37 1-39 (280)
431 1vl6_A Malate oxidoreductase; 88.5 0.36 1.2E-05 47.0 4.5 33 4-36 192-225 (388)
432 3zwc_A Peroxisomal bifunctiona 88.5 0.29 9.9E-06 52.2 4.1 34 5-38 317-350 (742)
433 1ez4_A Lactate dehydrogenase; 88.5 0.36 1.2E-05 46.1 4.3 37 1-37 2-40 (318)
434 2aqj_A Tryptophan halogenase, 88.5 0.89 3.1E-05 46.5 7.7 39 1-39 2-43 (538)
435 3gt0_A Pyrroline-5-carboxylate 88.2 0.47 1.6E-05 43.2 4.8 33 5-37 3-39 (247)
436 2egg_A AROE, shikimate 5-dehyd 88.2 0.43 1.5E-05 45.0 4.6 33 5-37 142-175 (297)
437 1qyc_A Phenylcoumaran benzylic 88.1 0.48 1.6E-05 44.2 5.0 38 1-38 1-39 (308)
438 3k30_A Histamine dehydrogenase 88.1 0.4 1.4E-05 50.8 4.9 39 5-43 524-564 (690)
439 1k0i_A P-hydroxybenzoate hydro 88.1 1.1 3.8E-05 43.4 7.8 58 232-289 103-163 (394)
440 3enk_A UDP-glucose 4-epimerase 88.0 0.55 1.9E-05 44.6 5.3 38 1-38 2-40 (341)
441 3e8x_A Putative NAD-dependent 87.9 0.52 1.8E-05 42.3 4.9 33 5-37 22-55 (236)
442 2hk9_A Shikimate dehydrogenase 87.9 0.38 1.3E-05 44.8 4.0 33 5-37 130-162 (275)
443 1edz_A 5,10-methylenetetrahydr 87.9 0.47 1.6E-05 45.1 4.7 32 5-36 178-210 (320)
444 1i36_A Conserved hypothetical 87.8 0.41 1.4E-05 44.0 4.1 30 6-35 2-31 (264)
445 2vhw_A Alanine dehydrogenase; 87.7 0.48 1.6E-05 46.3 4.9 33 5-37 169-201 (377)
446 3p7m_A Malate dehydrogenase; p 87.7 0.54 1.8E-05 44.9 5.0 33 5-37 6-39 (321)
447 3e1t_A Halogenase; flavoprotei 87.7 0.94 3.2E-05 46.0 7.2 37 4-40 7-43 (512)
448 1w4x_A Phenylacetone monooxyge 87.6 0.39 1.3E-05 49.3 4.3 35 5-39 187-221 (542)
449 1y7t_A Malate dehydrogenase; N 87.6 0.38 1.3E-05 45.9 3.9 37 1-37 1-45 (327)
450 3h2s_A Putative NADH-flavin re 87.5 0.56 1.9E-05 41.4 4.8 32 6-37 2-34 (224)
451 3dqp_A Oxidoreductase YLBE; al 87.3 0.55 1.9E-05 41.5 4.7 32 6-37 2-34 (219)
452 2d5c_A AROE, shikimate 5-dehyd 87.3 0.56 1.9E-05 43.2 4.8 32 6-37 118-149 (263)
453 1oju_A MDH, malate dehydrogena 87.3 0.42 1.4E-05 45.0 4.0 32 6-37 2-35 (294)
454 2qrj_A Saccharopine dehydrogen 87.3 0.4 1.4E-05 47.0 3.9 40 4-43 214-258 (394)
455 2pyx_A Tryptophan halogenase; 87.1 1.4 4.9E-05 44.8 8.2 37 3-39 6-54 (526)
456 1yb4_A Tartronic semialdehyde 87.1 0.38 1.3E-05 44.9 3.6 32 5-37 4-35 (295)
457 4b4o_A Epimerase family protei 87.1 0.66 2.2E-05 43.2 5.2 34 6-39 2-36 (298)
458 2rir_A Dipicolinate synthase, 87.0 0.63 2.2E-05 43.8 5.1 33 5-37 158-190 (300)
459 3vps_A TUNA, NAD-dependent epi 87.0 0.56 1.9E-05 43.9 4.7 35 4-38 7-42 (321)
460 1qyd_A Pinoresinol-lariciresin 86.9 0.6 2.1E-05 43.7 4.9 38 1-38 1-39 (313)
461 1gte_A Dihydropyrimidine dehyd 86.8 0.47 1.6E-05 52.7 4.7 33 6-38 334-367 (1025)
462 1nvt_A Shikimate 5'-dehydrogen 86.8 0.51 1.8E-05 44.1 4.3 32 5-37 129-160 (287)
463 3u62_A Shikimate dehydrogenase 86.7 0.69 2.3E-05 42.5 5.0 32 6-37 110-142 (253)
464 3ldh_A Lactate dehydrogenase; 86.7 0.48 1.7E-05 45.3 4.0 33 5-37 22-56 (330)
465 2bs2_A Quinol-fumarate reducta 86.6 1.2 4.1E-05 46.9 7.5 41 3-43 4-44 (660)
466 2i6t_A Ubiquitin-conjugating e 86.6 0.52 1.8E-05 44.6 4.2 34 5-38 15-50 (303)
467 3d4o_A Dipicolinate synthase s 86.4 0.71 2.4E-05 43.3 5.1 33 5-37 156-188 (293)
468 1ldn_A L-lactate dehydrogenase 86.4 0.6 2.1E-05 44.4 4.6 33 5-37 7-41 (316)
469 2h88_A Succinate dehydrogenase 86.3 1 3.5E-05 47.1 6.6 41 3-43 17-57 (621)
470 4gx0_A TRKA domain protein; me 86.2 0.61 2.1E-05 48.1 4.9 34 5-38 349-382 (565)
471 1rp0_A ARA6, thiazole biosynth 86.2 1.3 4.3E-05 41.2 6.7 57 231-288 118-190 (284)
472 3nep_X Malate dehydrogenase; h 86.1 0.56 1.9E-05 44.6 4.1 32 6-37 2-35 (314)
473 1pjq_A CYSG, siroheme synthase 86.0 0.64 2.2E-05 46.7 4.7 34 4-37 12-45 (457)
474 3don_A Shikimate dehydrogenase 86.0 0.55 1.9E-05 43.8 4.0 33 5-37 118-151 (277)
475 3b1f_A Putative prephenate deh 85.8 0.58 2E-05 43.6 4.1 33 5-37 7-41 (290)
476 3obb_A Probable 3-hydroxyisobu 85.7 0.66 2.3E-05 43.8 4.4 32 6-37 5-36 (300)
477 4a9w_A Monooxygenase; baeyer-v 85.5 1.3 4.4E-05 41.9 6.5 55 232-287 76-130 (357)
478 3d0o_A L-LDH 1, L-lactate dehy 85.4 0.69 2.4E-05 44.0 4.4 34 4-37 6-41 (317)
479 3i3l_A Alkylhalidase CMLS; fla 85.2 1.5 5.1E-05 45.5 7.2 39 3-41 22-60 (591)
480 4hv4_A UDP-N-acetylmuramate--L 85.2 0.64 2.2E-05 47.2 4.3 33 5-37 23-56 (494)
481 3ihg_A RDME; flavoenzyme, anth 85.2 1.4 4.8E-05 44.9 7.0 59 231-289 119-183 (535)
482 2zxi_A TRNA uridine 5-carboxym 85.1 1.9 6.3E-05 45.1 7.8 39 3-41 26-65 (637)
483 3ond_A Adenosylhomocysteinase; 85.0 0.77 2.6E-05 46.2 4.7 33 5-37 266-298 (488)
484 1lnq_A MTHK channels, potassiu 84.9 0.45 1.5E-05 45.5 2.9 33 5-38 116-148 (336)
485 2dbq_A Glyoxylate reductase; D 84.9 0.84 2.9E-05 43.8 4.8 34 5-38 151-184 (334)
486 2yjz_A Metalloreductase steap4 85.1 0.18 6.1E-06 44.7 0.0 34 5-38 20-53 (201)
487 4g6h_A Rotenone-insensitive NA 84.8 0.58 2E-05 47.6 3.8 37 6-42 219-269 (502)
488 3vku_A L-LDH, L-lactate dehydr 84.8 0.74 2.5E-05 44.0 4.3 33 5-37 10-44 (326)
489 3r6d_A NAD-dependent epimerase 84.8 0.96 3.3E-05 40.0 4.9 32 6-37 7-40 (221)
490 1lqt_A FPRA; NADP+ derivative, 84.7 0.72 2.5E-05 46.2 4.4 35 5-39 148-203 (456)
491 4aj2_A L-lactate dehydrogenase 84.7 0.9 3.1E-05 43.5 4.9 33 4-36 19-53 (331)
492 3tnl_A Shikimate dehydrogenase 84.7 0.97 3.3E-05 42.9 5.1 32 5-36 155-187 (315)
493 1ff9_A Saccharopine reductase; 84.7 0.84 2.9E-05 45.7 4.9 36 1-37 1-36 (450)
494 1mld_A Malate dehydrogenase; o 84.6 0.84 2.9E-05 43.4 4.6 32 6-37 2-36 (314)
495 3pwz_A Shikimate dehydrogenase 84.6 0.94 3.2E-05 42.1 4.9 33 5-37 121-154 (272)
496 2qa2_A CABE, polyketide oxygen 84.5 2.2 7.6E-05 43.1 8.1 57 232-289 107-166 (499)
497 3o8q_A Shikimate 5-dehydrogena 84.3 1 3.5E-05 42.0 5.0 33 5-37 127-160 (281)
498 2dkn_A 3-alpha-hydroxysteroid 84.3 1 3.6E-05 40.5 5.0 33 6-38 3-36 (255)
499 1lu9_A Methylene tetrahydromet 84.3 0.96 3.3E-05 42.2 4.8 33 5-37 120-153 (287)
500 2wm3_A NMRA-like family domain 84.2 0.88 3E-05 42.3 4.5 38 1-38 2-41 (299)
No 1
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.6e-87 Score=683.71 Aligned_cols=441 Identities=49% Similarity=0.885 Sum_probs=403.0
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEeccccee
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFM 80 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l 80 (445)
|+++|||||||||++|+++|+.|+++|++|+|+||++++||++++++.++++++|..+..+|+.++.+|+|+||++|+++
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l 96 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFI 96 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEe
Confidence 67889999999999999999999999999999999999999999999999999999888888899999999999999999
Q ss_pred ecCchhHHHhhhccccCceeeEEecceEEEe---------CCeEEEccCChHHHhhccccCchhHHHHHHHHHHHHhhhc
Q 036458 81 MANGGLVRILIHTDVTKYLNFKAVDGSFVYN---------KGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEE 151 (445)
Q Consensus 81 ~~~~~l~~~l~~~g~~~~l~~~~~~~~~~~~---------~g~~~~vp~~~~~~~~~~l~~~~~k~~~~~f~~~~~~~~~ 151 (445)
+++++++++|.++++.+|++|+.+++.|++. +|+++++|+++.+.|+++++++.+|+++++|+.++.++.+
T Consensus 97 ~~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lLs~~eK~~l~kFL~~l~~~~~ 176 (475)
T 3p1w_A 97 LVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLLSLMEKNRCKNFYQYVSEWDA 176 (475)
T ss_dssp ETTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTSCHHHHHHHHHHHHHHHHCCT
T ss_pred ecCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCCCHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999875 6789999999999999999999999999999999998866
Q ss_pred cCccccccccCCCCCHHHHHHHcCCChhHHHHHHHHhhccccCCCCCCcHHHHHHHHHHHHHHhhhccCCCceEEeCCCc
Q 036458 152 DDPKSHEGLDLNKVTAREIISKYGLEDDTIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGL 231 (445)
Q Consensus 152 ~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~i~~~~~l~~~~~~~~~~~~~~l~~i~~~~~s~~~~~g~s~~~~p~gG~ 231 (445)
..+.+++.+++...|+.+|++++++++.+++++.+++++...+++.+.|+.+++.++++|+.|+++| |+++++||+||+
T Consensus 177 ~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~~~~~~~~a~~~l~ri~~y~~Sl~~y-g~s~~~yp~gG~ 255 (475)
T 3p1w_A 177 NKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLNDDYLKQPAYLTLERIKLYMQSISAF-GKSPFIYPLYGL 255 (475)
T ss_dssp TCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH-SSCSEEEETTCT
T ss_pred ccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcCCCcccCCHHHHHHHHHHHHHHHhhc-CCCceEEECCCH
Confidence 5566666666677999999999999999999999999988766676778999999999999999999 999999999999
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCC---CccccccceEEEEEEeecc
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS-EGETAKCKKVVCDPSYL---PDKVQKVGKVARAICIMNH 307 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~-~g~~~~ad~VI~~~~~~---p~~~~~~~~~~r~i~i~~~ 307 (445)
++|+++|++.++++||+|+++++|++|..+++|++++|++ +|++++||+||++++++ |...++.+++.|++||+++
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~~~~p~~~~~~~~v~R~i~I~~~ 335 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYVMHLKNKIKKIGQVIRCICILSN 335 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGCTTSTTSEEEEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCccccCcccccccceEEEEEEEEec
Confidence 9999999999999999999999999999855788899986 67889999999999999 8776666799999999999
Q ss_pred CCCCCCCCCceEEEeCCCcCCCCCCEEEEEecCCccccCCCcEEEEEEeeeCCCCcccccHhHHhhcCCcccceeeeeec
Q 036458 308 PIPDTNDSHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAETDNPEVELKPGIDLLGPVDEIFFDTYDR 387 (445)
Q Consensus 308 ~i~~~~~~~~~~i~~p~~~~~~~~~i~v~~~s~~~~~aP~G~~~~~vst~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~ 387 (445)
|++++++..+++++||+.+++++++||++++|+++++||+|+|++|++|.+++++|+++|++++++|+||.|+|+.++++
T Consensus 336 pi~~~~~~~~~~i~~P~~~~~~~~~iy~~~~s~~~~~cp~G~~i~~~st~~e~~~~~~~l~~~l~~l~~~~~~~~~~~~~ 415 (475)
T 3p1w_A 336 PIPETNQTNSCQIIIPQNQLNRKSDIYINLVSFQHGVTLKGKYIAIVSATVETNNPIKEIEKPLELLGTIEEKFVKISDL 415 (475)
T ss_dssp CCTTSTTCSSEEEEECGGGGTSSSCEEEEEEEGGGTSSCTTCEEEEEEEECCSSCHHHHTHHHHHTTCSEEEEEEEEEEE
T ss_pred cCcccCCCceEEEEeCCcccCCCCCEEEEEECCCcCcCCCCcEEEEEEeecCCCCHHHHHHHHHHHhcchhheeccchhe
Confidence 99988878899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCcEEEccCCCCCCccHhHHHHHHHHHHHhcCCCcccccCchhhhhh
Q 036458 388 FVPTNNHEADHCFISTSYDATTHFESTVQDVLEMYTKITGKAVDLSVDLSAASAT 442 (445)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (445)
|+|.+++.++|||||+|||+++|||++++||++||+||||+++||++.++.++++
T Consensus 416 ~~~~~~~~~~~~~~~~~~d~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 470 (475)
T 3p1w_A 416 YVSTSKKPADNIFVTSSYDATSHFETATNDLLQIWENLWGQKLNFDDLNTNADGE 470 (475)
T ss_dssp EEESCSSCTTCEEECCCCCSCSBSHHHHHHHHHHHHHHHSSCCCC----------
T ss_pred eeecccCCCCCEEEeCCCCCccchHHHHHHHHHHHHHHhCCcceecCCCcccccc
Confidence 9999999999999999999999999999999999999999999999877766654
No 2
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=100.00 E-value=3.3e-70 Score=572.05 Aligned_cols=431 Identities=24% Similarity=0.472 Sum_probs=368.3
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCC---------------------
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDD--------------------- 59 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~--------------------- 59 (445)
|+++|||+|||||+.|+++|++|++.|++|+|+|||++|||.+++++++++++|+....
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l~~l~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTENSMWQEQILENEE 84 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHHHTC----------CGGGGCCTTEE
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccHHHHHHHHHHhhccccccccccchhhhhhcchh
Confidence 56789999999999999999999999999999999999999999999999988642100
Q ss_pred -------------------------------------------C------------------------------------
Q 036458 60 -------------------------------------------K------------------------------------ 60 (445)
Q Consensus 60 -------------------------------------------~------------------------------------ 60 (445)
.
T Consensus 85 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (650)
T 1vg0_A 85 AIPLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQKNHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQCP 164 (650)
T ss_dssp EEEBCSSCCCEEEEEEEECSCC----------------------------------------------------------
T ss_pred hccccccccccccceeEeecccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0
Q ss_pred -----------------------------------------CCCc--------cCCCCCeEEecccceeecCchhHHHhh
Q 036458 61 -----------------------------------------PPER--------LGSSKEYNVDMIPKFMMANGGLVRILI 91 (445)
Q Consensus 61 -----------------------------------------~~~~--------~~~~~~~~iDlgp~~l~~~~~l~~~l~ 91 (445)
+|+. ++.+|+|+||++|++|++++.++++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~R~f~~DL~PklL~~~g~lv~LL~ 244 (650)
T 1vg0_A 165 GPESSPEVNDAEATGKKENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLI 244 (650)
T ss_dssp ----------------------------------------------CCCHHHHHHTGGGCCEESSCCCEESSSHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccCCCeEEeeCCeeeeCCcHHHHHHH
Confidence 0100 236799999999999999999999999
Q ss_pred hccccCceeeEEecceEEEeCCeEEEccCChHHHhhccccCchhHHHHHHHHHHHHhhhccCccccccccCCCCCHHHHH
Q 036458 92 HTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLDLNKVTAREII 171 (445)
Q Consensus 92 ~~g~~~~l~~~~~~~~~~~~~g~~~~vp~~~~~~~~~~l~~~~~k~~~~~f~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 171 (445)
++|+.+|++|+.++..|++.+|+++++|+++.++|+++++++++|+++++|+.++.++.. .|..++. +...|+.+|+
T Consensus 245 ~sgV~~yLEFk~v~~~y~~~~G~~~~VPas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~~-~p~~~~~--~d~~S~~d~L 321 (650)
T 1vg0_A 245 KSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEE-HPDEYRA--YEGTTFSEYL 321 (650)
T ss_dssp HHTGGGGCCEEECCEEEEESSSSEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGGG-CHHHHHT--TTTSBHHHHH
T ss_pred HcCCcceeeEEEccceEEecCCCEeECCCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhcc-ChHHHhh--hccCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999988754 3433332 3578999999
Q ss_pred HHcCCChhHHHHHHHHhhccccCCCCCCcHHHHHHHHHHHHHHhhhccCCCceEEeCCCcchHHHHHHHHHHHcCcEEEe
Q 036458 172 SKYGLEDDTIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML 251 (445)
Q Consensus 172 ~~~~l~~~~~~~i~~~~~l~~~~~~~~~~~~~~l~~i~~~~~s~~~~~g~s~~~~p~gG~~~L~q~l~r~~~~~Gg~i~l 251 (445)
+++++++.+++++.+.+++...+ ..|+..++.++.+|+.++++| |+++++||+||+++|+++|+|.++++||+|++
T Consensus 322 ~~~~ls~~L~~~L~~~lal~~~~---~~pa~~~l~~i~~~l~sl~~y-g~sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l 397 (650)
T 1vg0_A 322 KTQKLTPNLQYFVLHSIAMTSET---TSCTVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCL 397 (650)
T ss_dssp TTSSSCHHHHHHHHHHTTC--CC---SCBHHHHHHHHHHHHHHTTSS-SSSSEEEETTCTTHHHHHHHHHHHHTTCEEES
T ss_pred HHhCCCHHHHHHHHHHHhccCCC---CCchhHHHHHHHHHHHHHHhh-ccCceEEeCCchhHHHHHHHHHHHHcCCEEEe
Confidence 99999999999998877776432 247888888889999999999 88899999999999999999999999999999
Q ss_pred CCcceeEEEcCC-CcEEEEE-eCCeEEEcCEEEECCCCCCccccc---cceEEEEEEeeccCCCCCCCC-CceEEEeCCC
Q 036458 252 NKPECKVEFDGD-GKVIGVT-SEGETAKCKKVVCDPSYLPDKVQK---VGKVARAICIMNHPIPDTNDS-HSCQVILPQK 325 (445)
Q Consensus 252 ~~~V~~I~~~~~-g~~~~v~-~~g~~~~ad~VI~~~~~~p~~~~~---~~~~~r~i~i~~~~i~~~~~~-~~~~i~~p~~ 325 (445)
+++|++|..+++ |++++|+ .+|++++||+||++++++|...+. .+++.|++|++++|++++... ...++++|+.
T Consensus 398 ~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~~~~~~~~~~~v~R~i~i~~~pi~~~~~~~~~~~iiiP~~ 477 (650)
T 1vg0_A 398 RHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTCSRVQYRQISRAVLITDGSVLRTDADQQVSILTVPAE 477 (650)
T ss_dssp SCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCTTTTTTCCCEEEEEEEEEESSCSSCCSCCCCCEEEEECCS
T ss_pred CCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCHhHhccccccceEEEEEEecCCCCCcCCCcceEEEEccCc
Confidence 999999998532 8899988 469999999999999888865432 468999999999998865432 5677788987
Q ss_pred cCCCCCCEEEEEecCCccccCCCcEEEEEEeeeCCCCcccccHhHHhhc-CCccc----------------ceeeeeecc
Q 036458 326 QLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAETDNPEVELKPGIDLL-GPVDE----------------IFFDTYDRF 388 (445)
Q Consensus 326 ~~~~~~~i~v~~~s~~~~~aP~G~~~~~vst~~~~~~~~~~l~~~~~~l-~~~~~----------------~~~~~~~~~ 388 (445)
+ +++++||++++|+++++||+|+|++|++|. ++.+++++|++++++| +++.+ .|+++.+.+
T Consensus 478 ~-g~~~~V~i~~~Ss~~~~cP~G~~Vv~lst~-~~~~~~~eLe~~l~~L~~~~~~~~~~~~~~~~~~vLws~~~~~~~~~ 555 (650)
T 1vg0_A 478 E-PGSFAVRVIELCSSTMTCMKGTYLVHLTCM-SSKTAREDLERVVQKLFTPYTEIEAENEQVEKPRLLWALYFNMRDSS 555 (650)
T ss_dssp S-TTSCCEEEEEECGGGTSSCTTCEEEEEEEE-CSSCHHHHHHHHHHHHCBSCSCCC-------CCBEEEEEEEEEEECT
T ss_pred c-CCCCCEEEEEeCCCCCCCCCCCEEEEEEee-cCCCHHHHHHHHHHHHhccccccccccccccCCceEEEEEEEeeccc
Confidence 7 578899999999999999999999999987 5789999999999954 66533 377777777
Q ss_pred ---ccCCCCCCCcEEEccCCCCCCccHhHHHHHHHHHHHhcCCCcccccCchhhh
Q 036458 389 ---VPTNNHEADHCFISTSYDATTHFESTVQDVLEMYTKITGKAVDLSVDLSAAS 440 (445)
Q Consensus 389 ---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (445)
+|..++.++|||+|++||+++|||++|++|++||++|+|.+-+|...++.++
T Consensus 556 ~~~~~~~~~~~~ni~~~~~~d~~~~fe~~v~~~~~i~~~i~~~e~F~p~~p~~e~ 610 (650)
T 1vg0_A 556 DISRDCYNDLPSNVYVCSGPDSGLGNDNAVKQAETLFQQICPNEDFCPAPPNPED 610 (650)
T ss_dssp TCCGGGSSSCCTTEEEECCCCSSSSSHHHHHHHHHHHHHHSTTCCSSCCCC----
T ss_pred ccccccccCCCCCEEEeCCCCCccCHHHHHHHHHHHHHHHcCCCCCCCCCcCccc
Confidence 6776788899999999999999999999999999999999999987775443
No 3
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=100.00 E-value=1.2e-67 Score=542.45 Aligned_cols=438 Identities=53% Similarity=0.951 Sum_probs=378.4
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCC----CCCCccCCCCCeEEecc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDD----KPPERLGSSKEYNVDMI 76 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~----~~~~~~~~~~~~~iDlg 76 (445)
|++++||||||||++||+||++|+++|++|+|+||++++||+++|++.++.+.+|..+. .++..++.++.|.+|++
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~ 87 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLI 87 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESS
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeeccc
Confidence 55789999999999999999999999999999999999999999999887555554321 01112445578999999
Q ss_pred cceeecCchhHHHhhhccccCceeeEEecceEEEeCCeEEEccCChHHHhhccccCchhHHHHHHHHHHHHhhhccCccc
Q 036458 77 PKFMMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKS 156 (445)
Q Consensus 77 p~~l~~~~~l~~~l~~~g~~~~l~~~~~~~~~~~~~g~~~~vp~~~~~~~~~~l~~~~~k~~~~~f~~~~~~~~~~~~~~ 156 (445)
|+++++++.+.++|.++|+.+|++|..++..|++.+|+.+++|.++.+.+.+.++++++|+.+++|+..+.++....|..
T Consensus 88 P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~ 167 (453)
T 2bcg_G 88 PKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLST 167 (453)
T ss_dssp CCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEETTEEEECCSSHHHHHHCTTSCHHHHHHHHHHHHHHHHCBTTBGGG
T ss_pred cceeecCcHHHHHHHhcCCccceEEEEccceeEEeCCeEEECCCChHHHHhhhccchhhHHHHHHHHHHHHHhccCCchh
Confidence 99999999999999999999999999999888888999999999988899999999999999999999988765433433
Q ss_pred cccccCCCCCHHHHHHHcCCChhHHHHHHHHhhccccCCCCCCcHHHHHHHHHHHHHHhhhccCCCceEEeCCCcchHHH
Q 036458 157 HEGLDLNKVTAREIISKYGLEDDTIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQ 236 (445)
Q Consensus 157 ~~~~~~~~~s~~~~~~~~~l~~~~~~~i~~~~~l~~~~~~~~~~~~~~l~~i~~~~~s~~~~~g~s~~~~p~gG~~~L~q 236 (445)
++.++....|+.+|++++++++.+++++.+.+.+...+.|...|+...+.++..|+.+++.| +.++|.||+||+++|++
T Consensus 168 ~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~~s~~~~-~~~~~~~p~gG~~~l~~ 246 (453)
T 2bcg_G 168 HQGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARY-GKSPYLYPMYGLGELPQ 246 (453)
T ss_dssp STTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH-SSCSEEEETTCTTHHHH
T ss_pred hhccccccCCHHHHHHHhCCCHHHHHHHHHHHHhccCccccCCchHHHHHHHHHHHHHHHhh-cCCceEeeCCCHHHHHH
Confidence 33223456899999999999999999887777766555566668888888888888888888 77888899999999999
Q ss_pred HHHHHHHHcCcEEEeCCcceeEEEcC-CCcEEEEEeCCeEEEcCEEEECCCCCCccccccc-eEEEEEEeeccCCCCCCC
Q 036458 237 AFARLSAVYGGTYMLNKPECKVEFDG-DGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVG-KVARAICIMNHPIPDTND 314 (445)
Q Consensus 237 ~l~r~~~~~Gg~i~l~~~V~~I~~~~-~g~~~~v~~~g~~~~ad~VI~~~~~~p~~~~~~~-~~~r~i~i~~~~i~~~~~ 314 (445)
+|++.++..|++|+++++|++|..+. ++++++|+++|+++.||.||+++++++.+.++.. ...++++++++++++++.
T Consensus 247 al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~g~~~~ad~VV~a~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~ 326 (453)
T 2bcg_G 247 GFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYFPEKCKSTGQRVIRAICILNHPVPNTSN 326 (453)
T ss_dssp HHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEETTEEEECSCEEECGGGCGGGEEEEEEEEEEEEEEESSCCTTSTT
T ss_pred HHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEECCeEEECCEEEECCCccchhhcccCCcceeEEEEEccccCCCCC
Confidence 99999999999999999999999842 6778888888999999999999998877655555 678899999999986655
Q ss_pred CCceEEEeCCCcCCCCCCEEEEEecCCccccCCCcEEEEEEeeeCCCCcccccHhHHhhcCCcccceeeeeeccccCCCC
Q 036458 315 SHSCQVILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAETDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNH 394 (445)
Q Consensus 315 ~~~~~i~~p~~~~~~~~~i~v~~~s~~~~~aP~G~~~~~vst~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 394 (445)
..++++++|..++++++++|++++|..+++||+|+++++++++++..+++++|++++++|+++++.|+++.++|+|++++
T Consensus 327 ~~~~~ii~~~~~~~~~~~~~v~~~s~~d~~aP~G~~~~~v~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 406 (453)
T 2bcg_G 327 ADSLQIIIPQSQLGRKSDIYVAIVSDAHNVCSKGHYLAIISTIIETDKPHIELEPAFKLLGPIEEKFMGIAELFEPREDG 406 (453)
T ss_dssp CSSEEEEECGGGTTCSSCEEEEEEEGGGTSSCTTCEEEEEEEECCSSCHHHHTHHHHGGGCSCSEEEEEEEEEEEESSCS
T ss_pred CccEEEEeCccccCCCCCEEEEEeCCCCCCCCCCcEEEEEEEecCCCCHHHHHHHHHHHhhhHHHhhccchheeeecCCC
Confidence 56888999987777889999999886558999999999999999999999999999999999999999999999999888
Q ss_pred CCCcEEEccCCCCCCccHhHHHHHHHHHHHhcCCCcccccCchhh
Q 036458 395 EADHCFISTSYDATTHFESTVQDVLEMYTKITGKAVDLSVDLSAA 439 (445)
Q Consensus 395 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (445)
..+|||+|++||+++|||+|+++++++|++|+|+++||++.+..+
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 451 (453)
T 2bcg_G 407 SKDNIYLSRSYDASSHFESMTDDVKDIYFRVTGHPLVLKQRQEQE 451 (453)
T ss_dssp TTTSEEECCCCCSCSBSHHHHHHHHHHHHHHHSSCCCCCCCC---
T ss_pred CCCCEEECCCCCccccHHHHHHHHHHHHHHHHCCccccccCcccc
Confidence 889999999999999999999999999999999999999776554
No 4
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=100.00 E-value=1.4e-66 Score=531.41 Aligned_cols=430 Identities=58% Similarity=1.062 Sum_probs=376.8
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccc-hhhhhhhhcCCCCCCCccCCCCCeEEecccce
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN-LTQLWKRFKGDDKPPERLGSSKEYNVDMIPKF 79 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~ 79 (445)
|++++||+|||||++||++|++|+++|++|+|+|+++++||+++|++ +.+.++++.++..++..++.+++|.+|+||++
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~ 82 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKF 82 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCB
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcce
Confidence 78899999999999999999999999999999999999999999999 55444445443345556667789999999999
Q ss_pred eecCchhHHHhhhccccCceeeEEecceEEEeCCeEEEccCChHHHhhccccCchhHHHHHHHHHHHHhhhccCcccccc
Q 036458 80 MMANGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEG 159 (445)
Q Consensus 80 l~~~~~l~~~l~~~g~~~~l~~~~~~~~~~~~~g~~~~vp~~~~~~~~~~l~~~~~k~~~~~f~~~~~~~~~~~~~~~~~ 159 (445)
+++++.+.+++.++|+.++++|..+++.|++.+|+.+++|.+..+.+.+.++++++++.+++|+..+.++....|..++.
T Consensus 83 l~~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 162 (433)
T 1d5t_A 83 LMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEG 162 (433)
T ss_dssp EETTSHHHHHHHHHTGGGGCCEEECCEEEEEETTEEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHHCCTTCGGGGTT
T ss_pred eeccchHHHHHHHcCCccceEEEEeCceEEeeCCEEEECCCCHHHHhhCcccChhhHHHHHHHHHHHHhhcccCchhccc
Confidence 99988999999999999999999998888888999999999976889999999999999999999988875444433333
Q ss_pred ccCCCCCHHHHHHHcCCChhHHHHHHHHhhccccCCCCCCcHHHHHHHHHHHHHHhhhccCCCceEEeCCCcchHHHHHH
Q 036458 160 LDLNKVTAREIISKYGLEDDTIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFA 239 (445)
Q Consensus 160 ~~~~~~s~~~~~~~~~l~~~~~~~i~~~~~l~~~~~~~~~~~~~~l~~i~~~~~s~~~~~g~s~~~~p~gG~~~L~q~l~ 239 (445)
.+....|+.+|++++++++.+++++.+.++++...++.+.|+..++.++..|..+++.| |.++++||+||+++|+++|+
T Consensus 163 ~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~-g~~~~~~p~gG~~~l~~~l~ 241 (433)
T 1d5t_A 163 VDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 241 (433)
T ss_dssp CCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSS-SCCSEEEETTCTTHHHHHHH
T ss_pred cccccCCHHHHHHHcCCCHHHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhc-CCCcEEEeCcCHHHHHHHHH
Confidence 34456899999999999999999887776666555555668888888888888877778 77889999999999999999
Q ss_pred HHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCCccccccceEEEEEEeeccCCCCCCCCCceE
Q 036458 240 RLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPDKVQKVGKVARAICIMNHPIPDTNDSHSCQ 319 (445)
Q Consensus 240 r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p~~~~~~~~~~r~i~i~~~~i~~~~~~~~~~ 319 (445)
+.++..|++|+++++|++|..+ ++++++|.++|++++||+||+++++++...++..+..+++++++++++.++...+++
T Consensus 242 ~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~~~g~~~~ad~VV~a~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~ 320 (433)
T 1d5t_A 242 RLSAIYGGTYMLNKPVDDIIME-NGKVVGVKSEGEVARCKQLICDPSYVPDRVRKAGQVIRIICILSHPIKNTNDANSCQ 320 (433)
T ss_dssp HHHHHHTCCCBCSCCCCEEEEE-TTEEEEEEETTEEEECSEEEECGGGCGGGEEEEEEEEEEEEEESSCCTTSTTCSSEE
T ss_pred HHHHHcCCEEECCCEEEEEEEe-CCEEEEEEECCeEEECCEEEECCCCCcccccccCcceeEEEEEcCcccccCCCceEE
Confidence 9999999999999999999984 778888888999999999999998887655444567778899999988665556889
Q ss_pred EEeCCCcCCCCCCEEEEEecCCccccCCCcEEEEEEeeeCCCCcccccHhHHhhcCCcccceeeeeeccccCCCCCCCcE
Q 036458 320 VILPQKQLGRKSDMYLFCCSYAHNVAPNGQYIAFVSTEAETDNPEVELKPGIDLLGPVDEIFFDTYDRFVPTNNHEADHC 399 (445)
Q Consensus 320 i~~p~~~~~~~~~i~v~~~s~~~~~aP~G~~~~~vst~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (445)
+++|..++++++++|++++|.|+++||+|+++++++++++..+++++|++++++|+|+++.|+++.+.|+|++++..+||
T Consensus 321 i~~~~~~~~~~~~~~v~~~s~d~~~aP~G~~~~~~~~~~p~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (433)
T 1d5t_A 321 IIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETTDPEKEVEPALGLLEPIDQKFVAISDLYEPIDDGSESQV 400 (433)
T ss_dssp EEECGGGTTCSSCEEEEEEEGGGTSSCTTCEEEEEEEECCSSCHHHHTHHHHTTTCSCSEEEEEEEEEEEESCCSTTTCE
T ss_pred EEeCccccCCCCCEEEEEECCCCcccCCCCEEEEEEEecCCCCHHHHHHHHHHHhhhHHhheeccceeeeecCCCCCCCE
Confidence 99998888788999999988889999999999999999999999999999999999999999999999999988888999
Q ss_pred EEccCCCCCCccHhHHHHHHHHHHHhcCCCccc
Q 036458 400 FISTSYDATTHFESTVQDVLEMYTKITGKAVDL 432 (445)
Q Consensus 400 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (445)
|+|+|||+++|||+|+++++++|+||+|+++||
T Consensus 401 ~~~~~~d~~~~~e~~~~~~~~~~~~~~~~~~~~ 433 (433)
T 1d5t_A 401 FCSCSYDATTHFETTCNDIKDIYKRMAGSAFDF 433 (433)
T ss_dssp EECCCCCSCSBSHHHHHHHHHHHHHHHSSCCCC
T ss_pred EECCCCCccccHHHHHHHHHHHHHHHhCCcCCC
Confidence 999999999999999999999999999999997
No 5
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=1.9e-31 Score=276.42 Aligned_cols=320 Identities=16% Similarity=0.226 Sum_probs=196.7
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccceeecCc
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFMMANG 84 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l~~~~ 84 (445)
.+|||||||++||+||++|+++|++|+||||++++||+++|++. .||.||.||+++..+.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~--------------------~G~~~D~G~~~~~~~~ 61 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYED--------------------QGFTFDAGPTVITDPS 61 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEE--------------------TTEEEECSCCCBSCTH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEe--------------------CCEEEecCceeecCch
Confidence 47999999999999999999999999999999999999999987 5699999999987765
Q ss_pred hhHHHhhhcc--ccCceeeEEecceE--EEeCCeEEEccCChHHHhhccccCc--hhHHHHHHHHHHHHhhhccCccccc
Q 036458 85 GLVRILIHTD--VTKYLNFKAVDGSF--VYNKGKIYKVPATDVEALKSPLMGL--FEKRRARKFFIYVQEYEEDDPKSHE 158 (445)
Q Consensus 85 ~l~~~l~~~g--~~~~l~~~~~~~~~--~~~~g~~~~vp~~~~~~~~~~l~~~--~~k~~~~~f~~~~~~~~~~~~~~~~ 158 (445)
.+-+++...| +.+++++.++++.| .+.+|+...++.+ .+.+...+..+ .+...+.+|+..+............
T Consensus 62 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (501)
T 4dgk_A 62 AIEELFALAGKQLKEYVELLPVTPFYRLCWESGKVFNYDND-QTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLG 140 (501)
T ss_dssp HHHHHHHTTTCCGGGTCCEEEESSSEEEEETTSCEEEECSC-HHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--C
T ss_pred hHHHHHHHhcchhhhceeeEecCcceEEEcCCCCEEEeecc-HHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhcc
Confidence 4445555544 56788998888776 4568888888888 45554443332 3455677777766543211100000
Q ss_pred ccc-------------CCC----CCHHHHHHHcCCChhHHHHHHHHhhccccCCCCCCcHHHHHHHHHHHHHHhhhccCC
Q 036458 159 GLD-------------LNK----VTAREIISKYGLEDDTIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGG 221 (445)
Q Consensus 159 ~~~-------------~~~----~s~~~~~~~~~l~~~~~~~i~~~~~l~~~~~~~~~~~~~~l~~i~~~~~s~~~~~g~ 221 (445)
... +.. .++.+++.++--++.++.++.....+..... ...++...+. .++ . ..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~p-~~~~~~~~~~---~~~----~--~~ 210 (501)
T 4dgk_A 141 TVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNP-FATSSIYTLI---HAL----E--RE 210 (501)
T ss_dssp CCCCCCHHHHHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSCC---CCCTHHHH---HHH----H--SC
T ss_pred ccccchhhhhhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCCCc-chhhhhhhhh---hhh----h--cc
Confidence 000 000 1334444444445555544321111111111 1112211110 011 1 22
Q ss_pred CceEEeCCCcchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCC-------Cccc-
Q 036458 222 SPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS-EGETAKCKKVVCDPSYL-------PDKV- 292 (445)
Q Consensus 222 s~~~~p~gG~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~-~g~~~~ad~VI~~~~~~-------p~~~- 292 (445)
...+||+||++.|+++|++.++.+||+|++|++|++|.. +++++++|++ +|+++.||.||+++++. +...
T Consensus 211 ~G~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~ 289 (501)
T 4dgk_A 211 WGVWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPA 289 (501)
T ss_dssp CCEEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC--------------
T ss_pred CCeEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhcccccc
Confidence 235799999999999999999999999999999999999 4888999885 88999999999987643 1110
Q ss_pred -----cccc--eEEEEE----EeeccCCCCCCCCCceEEEeCC------------CcCCCCCCEEEEEec-CCccccCCC
Q 036458 293 -----QKVG--KVARAI----CIMNHPIPDTNDSHSCQVILPQ------------KQLGRKSDMYLFCCS-YAHNVAPNG 348 (445)
Q Consensus 293 -----~~~~--~~~r~i----~i~~~~i~~~~~~~~~~i~~p~------------~~~~~~~~i~v~~~s-~~~~~aP~G 348 (445)
+... +...+. +.++.+.+. ..++++++.+ ..+++++.+|++.+| .|+..+|+|
T Consensus 290 ~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~---l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G 366 (501)
T 4dgk_A 290 AVKQSNKLQTKRMSNSLFVLYFGLNHHHDQ---LAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEG 366 (501)
T ss_dssp -------------CCEEEEEEEEESSCCTT---SCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTT
T ss_pred chhhhhhhhccccCCceeEEEecccCCccc---cccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCC
Confidence 0010 111122 234554432 2344444432 123345678888876 689999999
Q ss_pred cEEEEEEeeeC
Q 036458 349 QYIAFVSTEAE 359 (445)
Q Consensus 349 ~~~~~vst~~~ 359 (445)
+.++++.++++
T Consensus 367 ~~~~~~~~~~p 377 (501)
T 4dgk_A 367 CGSYYVLAPVP 377 (501)
T ss_dssp CEEEEEEEEEC
T ss_pred CceEEEEEecC
Confidence 99999888775
No 6
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.96 E-value=2.9e-26 Score=232.47 Aligned_cols=364 Identities=15% Similarity=0.176 Sum_probs=231.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccceeec--
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFMMA-- 82 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l~~-- 82 (445)
.||||||||++||+||+.|+++|++|+|+||++++||++++++. .+|.+|.||++++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~--------------------~g~~~d~G~~~~~~~~ 60 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPY--------------------KGFQLSTGALHMIPHG 60 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEE--------------------TTEEEESSSCSEETTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEecc--------------------CCEEEecCCeEEEccC
Confidence 38999999999999999999999999999999999999999987 46999999987764
Q ss_pred -CchhHHHhhhccccCceeeEEecce-EEEeCCeEEEccCChHHHhhccccCchhHHHHHHHHHHHHhhhccCccccccc
Q 036458 83 -NGGLVRILIHTDVTKYLNFKAVDGS-FVYNKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGL 160 (445)
Q Consensus 83 -~~~l~~~l~~~g~~~~l~~~~~~~~-~~~~~g~~~~vp~~~~~~~~~~l~~~~~k~~~~~f~~~~~~~~~~~~~~~~~~ 160 (445)
...+.+++.++|+. .++...++. .++.+|+.+.+|.. . ..++..++..+.+++..+... ..
T Consensus 61 ~~~~~~~l~~~lg~~--~~~~~~~~~~~~~~~g~~~~~~~~-~-----~~l~~~~~~~~~~~~~~~~~~---------~~ 123 (421)
T 3nrn_A 61 EDGPLAHLLRILGAK--VEIVNSNPKGKILWEGKIFHYRES-W-----KFLSVKEKAKALKLLAEIRMN---------KL 123 (421)
T ss_dssp TSSHHHHHHHHHTCC--CCEEECSSSCEEEETTEEEEGGGG-G-----GGCC--------CCHHHHHTT---------CC
T ss_pred CChHHHHHHHHhCCc--ceEEECCCCeEEEECCEEEEcCCc-h-----hhCCHhHHHHHHHHHHHHHhc---------cC
Confidence 33666777777774 344444432 34558888888754 1 234445554444444333210 11
Q ss_pred cCCCCCHHHHHHHcCCChh-HHHHHHHHhhccccCCCCCCcHHHHHHHHHHHHHHhhhccCCCceEEeCCCcchHHHHHH
Q 036458 161 DLNKVTAREIISKYGLEDD-TIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFA 239 (445)
Q Consensus 161 ~~~~~s~~~~~~~~~l~~~-~~~~i~~~~~l~~~~~~~~~~~~~~l~~i~~~~~s~~~~~g~s~~~~p~gG~~~L~q~l~ 239 (445)
.....++.+|+++++++.. +..++..........+..+.++...+..+..+. .+ ++ .++|++|+++|+++|+
T Consensus 124 ~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~g--~~~~~gG~~~l~~~l~ 196 (421)
T 3nrn_A 124 PKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAAL----RW-GG--PGLIRGGCKAVIDELE 196 (421)
T ss_dssp CCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHH----HH-CS--CEEETTCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHh----hc-CC--cceecCCHHHHHHHHH
Confidence 1234789999988755544 444443332221111222346666666554432 22 22 3689999999999999
Q ss_pred HHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCC------C-----ccc----ccc--ceEEEEE
Q 036458 240 RLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYL------P-----DKV----QKV--GKVARAI 302 (445)
Q Consensus 240 r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~------p-----~~~----~~~--~~~~r~i 302 (445)
+.++..|++|+++++|++|.. +++++ |+++|+++.||.||++.+.. + ... +.. .......
T Consensus 197 ~~~~~~G~~i~~~~~V~~i~~-~~~~v--V~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~ 273 (421)
T 3nrn_A 197 RIIMENKGKILTRKEVVEINI-EEKKV--YTRDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFN 273 (421)
T ss_dssp HHHHTTTCEEESSCCEEEEET-TTTEE--EETTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEE
T ss_pred HHHHHCCCEEEcCCeEEEEEE-ECCEE--EEeCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEE
Confidence 999999999999999999987 46665 67788899999999987642 1 110 011 1222223
Q ss_pred EeeccCCCCCCCCCceEEEeCCCcCCCCCCEEEEEec-CCccccCCCcEEEEEEeeeCCCCcccccHhHHhhcCCcc---
Q 036458 303 CIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCS-YAHNVAPNGQYIAFVSTEAETDNPEVELKPGIDLLGPVD--- 378 (445)
Q Consensus 303 ~i~~~~i~~~~~~~~~~i~~p~~~~~~~~~i~v~~~s-~~~~~aP~G~~~~~vst~~~~~~~~~~l~~~~~~l~~~~--- 378 (445)
+.++++.. .+..+++++..- - -.+..+| .++.++|+|+.++++++.++..+++++++.+++.|..+.
T Consensus 274 l~~~~~~~-----~~~~~~~~~~~~--~--~~i~~~s~~~p~~ap~G~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~p~~ 344 (421)
T 3nrn_A 274 LAVPGEPR-----IGNTIVFTPGLM--I--NGFNEPSALDKSLAREGYTLIMAHMALKNGNVKKAIEKGWEELLEIFPEG 344 (421)
T ss_dssp EEEESSCS-----SCSSEEECTTSS--S--CEEECGGGTCGGGSCTTEEEEEEEEECTTCCHHHHHHHHHHHHHHHCTTC
T ss_pred EEEcCCcc-----cCCeEEEcCCcc--e--eeEeccCCCCCCcCCCCceEEEEEEeeccccHHHHHHHHHHHHHHHcCCC
Confidence 34455421 133445554321 1 1234444 688999999999999998877666666777777554221
Q ss_pred c-ceee-eee---ccccC-----CCCCCCcEEEccCCCCCC-cc--HhHHHHHHHHHHHh
Q 036458 379 E-IFFD-TYD---RFVPT-----NNHEADHCFISTSYDATT-HF--ESTVQDVLEMYTKI 425 (445)
Q Consensus 379 ~-~~~~-~~~---~~~~~-----~~~~~~~~~~~~~~d~~~-~~--~~~~~~~~~~~~~~ 425 (445)
+ ..+. +.+ .|.+. .... +|+|++..+-... .+ |.|+..++..-++|
T Consensus 345 ~~~~~~~~~~~~p~~~~~~~~~~~~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 345 EPLLAQVYRDGNPVNRTRAGLHIEWPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp EEEEEEEC-------------CCCCCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred eEEEeeeccCCCCcccccCCCCCCCCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 1 1111 111 11110 1123 8999998766666 56 99999999998888
No 7
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.95 E-value=6e-26 Score=230.03 Aligned_cols=368 Identities=16% Similarity=0.183 Sum_probs=225.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccceeec--
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFMMA-- 82 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l~~-- 82 (445)
+||||||||++||+||+.|+++|++|+||||++++||+++++.. .+|.+|.||+++..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~--------------------~G~~~d~G~~~~~~~~ 60 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSY--------------------KGFQLSSGAFHMLPNG 60 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEE--------------------TTEEEESSSCSCBTTG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeecc--------------------CCcEEcCCCceEecCC
Confidence 58999999999999999999999999999999999999999887 46999999977653
Q ss_pred -CchhHHHhhhccccCceeeEEecceEEEeC-----------CeEEEccCChHHHhhccccCchhHHHHHHHHHHHHhhh
Q 036458 83 -NGGLVRILIHTDVTKYLNFKAVDGSFVYNK-----------GKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYE 150 (445)
Q Consensus 83 -~~~l~~~l~~~g~~~~l~~~~~~~~~~~~~-----------g~~~~vp~~~~~~~~~~l~~~~~k~~~~~f~~~~~~~~ 150 (445)
...+.+++.++|+...+. ..+..+++.+ ++.+.++.. ...+++.++.++...+ ....
T Consensus 61 ~~~~~~~l~~~lg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~---~~~~ 129 (425)
T 3ka7_A 61 PGGPLACFLKEVEASVNIV--RSEMTTVRVPLKKGNPDYVKGFKDISFNDF------PSLLSYKDRMKIALLI---VSTR 129 (425)
T ss_dssp GGSHHHHHHHHTTCCCCEE--ECCCCEEEEESSTTCCSSTTCEEEEEGGGG------GGGSCHHHHHHHHHHH---HHTT
T ss_pred CccHHHHHHHHhCCCceEE--ecCCceEEeecCCCcccccccccceehhhh------hhhCCHHHHHHHHHHH---Hhhh
Confidence 235667777788754333 2222222211 444544421 1234545554443332 2111
Q ss_pred ccCccccccccCCCCCHHHHHHHcCCChhHHHHHHHHhhccccCCCCCCcHHHHHHHHHHHHHHhhhccCCCceEEeCCC
Q 036458 151 EDDPKSHEGLDLNKVTAREIISKYGLEDDTIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYG 230 (445)
Q Consensus 151 ~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~i~~~~~l~~~~~~~~~~~~~~l~~i~~~~~s~~~~~g~s~~~~p~gG 230 (445)
. . .....++.+|++++.-++.+..++..........+....++...+..+..+. .+ |+ ..+|.+|
T Consensus 130 ~-------~-~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~----~~-~~--~~~~~gG 194 (425)
T 3ka7_A 130 K-------N-RPSGSSLQAWIKSQVSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMY----RF-GG--TGIPEGG 194 (425)
T ss_dssp T-------S-CCCSSBHHHHHHHHCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHH----HH-CS--CEEETTS
T ss_pred h-------c-CCCCCCHHHHHHHhcCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHH----hc-CC--ccccCCC
Confidence 0 0 1135789999987755555555443322111111112335555555444331 22 22 2589999
Q ss_pred cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCC------Ccc-----c-------
Q 036458 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYL------PDK-----V------- 292 (445)
Q Consensus 231 ~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~------p~~-----~------- 292 (445)
++.|+++|++.++..|++|+++++|++|..+ ++++++|+++|++++||.||++.+.+ +.. .
T Consensus 195 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~gv~~~g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~ 273 (425)
T 3ka7_A 195 CKGIIDALETVISANGGKIHTGQEVSKILIE-NGKAAGIIADDRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMV 273 (425)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEECCceeEEEEE-CCEEEEEEECCEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHh
Confidence 9999999999999999999999999999984 77888888889999999999987642 210 0
Q ss_pred ccc--ceEEEEEEeeccCCCCCCCCCceEEEeCCCcCCCCCCEEEEEec-CCccccCCCcEEEEEEeeeCCCC---cccc
Q 036458 293 QKV--GKVARAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCS-YAHNVAPNGQYIAFVSTEAETDN---PEVE 366 (445)
Q Consensus 293 ~~~--~~~~r~i~i~~~~i~~~~~~~~~~i~~p~~~~~~~~~i~v~~~s-~~~~~aP~G~~~~~vst~~~~~~---~~~~ 366 (445)
+.. .......+.++++.. .+..++++... .....+..+| .++..||+|+.++++......++ .+++
T Consensus 274 ~~~~~~~~~~v~l~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~~~~~ 345 (425)
T 3ka7_A 274 GTLQPSAGIKICLAADEPLV-----GHTGVLLTPYT---RRINGVNEVTQADPELAPPGKHLTMCHQYVAPENVKNLESE 345 (425)
T ss_dssp HHCCCBEEEEEEEEESSCSS-----CSSSEEECCSS---SSEEEEECGGGTCGGGSCTTCEEEEEEEEECGGGGGGHHHH
T ss_pred hCcCCCceEEEEeecCCCcc-----CcCEEEECCCh---hhcceEEeccCCCCCcCCCCCeEEEEEeccccccccchHHH
Confidence 011 122233344566543 23445565431 1122344444 68899999999998766543222 2244
Q ss_pred cHhHHhhcC---C-ccccee---eee---eccccCC-----CCCC-CcEEEccCCCC---CCccHhHHHHHHHHHHHhcC
Q 036458 367 LKPGIDLLG---P-VDEIFF---DTY---DRFVPTN-----NHEA-DHCFISTSYDA---TTHFESTVQDVLEMYTKITG 427 (445)
Q Consensus 367 l~~~~~~l~---~-~~~~~~---~~~---~~~~~~~-----~~~~-~~~~~~~~~d~---~~~~~~~~~~~~~~~~~~~~ 427 (445)
++.+++-|. | +..... .+. ..|.+.. ...+ +|+|++..+-. ....+.|+-.++..-++|.|
T Consensus 346 ~~~~~~~l~~~~p~~~~~~~~v~~~~~~~P~~~~~~~~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 346 IEMGLEDLKEIFPGKRYEVLLIQSYHDEWPVNRAASGTDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp HHHHHHHHHHHSTTCCEEEEEEEEEBTTBCSBSSCTTCCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHhCCCCceEEEEEEEECCCccccccccCCCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhhC
Confidence 555554332 2 111111 111 1222111 1123 79999965544 47889999999999888875
No 8
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.92 E-value=3.6e-23 Score=212.97 Aligned_cols=383 Identities=11% Similarity=0.096 Sum_probs=224.9
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccceeec
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFMMA 82 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l~~ 82 (445)
..+||+|||||++||+||+.|+++|++|+|+|+++++||+++|++. .++.+|+|++++..
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~--------------------~g~~~~~g~~~~~~ 74 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHAL--------------------AGYLVEQGPNSFLD 74 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEE--------------------TTEEEESSCCCEET
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeecc--------------------CCeeeecChhhhhh
Confidence 4589999999999999999999999999999999999999999987 46999999999986
Q ss_pred C-chhHHHhhhccccCceeeEE--ecceEEEeCCeEEEccCChHHHhhccccCchhHHHHHHHHHHHHhhhccCcccccc
Q 036458 83 N-GGLVRILIHTDVTKYLNFKA--VDGSFVYNKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEG 159 (445)
Q Consensus 83 ~-~~l~~~l~~~g~~~~l~~~~--~~~~~~~~~g~~~~vp~~~~~~~~~~l~~~~~k~~~~~f~~~~~~~~~~~~~~~~~ 159 (445)
. ..+.+++.+.|+...+.+.. ....+++.+|+.+.+|.+..+.+...+.++.++.+ .+..+-.. + ..
T Consensus 75 ~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~--~~- 144 (478)
T 2ivd_A 75 REPATRALAAALNLEGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLASDILPLGARLR------VAGELFSR-R--AP- 144 (478)
T ss_dssp TCHHHHHHHHHTTCGGGEECSCSSCCCEEEEETTEEEECCCSHHHHHTCSSSCHHHHHH------HHGGGGCC-C--CC-
T ss_pred hhHHHHHHHHHcCCcceeeecCccccceEEEECCEEEECCCCHHHhccCCCCCHHHHHH------HhhhhhcC-C--CC-
Confidence 4 46677888889876554332 12356778899999998855555555554433321 22222111 0 01
Q ss_pred ccCCCCCHHHHHHHcCCChhHHH-HHHHHhh-ccccCCCCCCcHHHHHHHHHHHHHHhh----------h--------cc
Q 036458 160 LDLNKVTAREIISKYGLEDDTID-FIGHALA-LHINDSYLEEPAMDFVKRIKLYAESLA----------R--------FQ 219 (445)
Q Consensus 160 ~~~~~~s~~~~~~~~~l~~~~~~-~i~~~~~-l~~~~~~~~~~~~~~l~~i~~~~~s~~----------~--------~~ 219 (445)
..+..|+.+|+++. +.+...+ ++..... .+.. +..+.++...+.++..+....+ . ..
T Consensus 145 -~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (478)
T 2ivd_A 145 -EGVDESLAAFGRRH-LGHRATQVLLDAVQTGIYAG-DVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAG 221 (478)
T ss_dssp -TTCCCBHHHHHHHH-TCHHHHHHTHHHHHHHHHCC-CTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----C
T ss_pred -CCCCCCHHHHHHHh-hCHHHHHHHHHHHhceeecC-CHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCccc
Confidence 23568999999874 4454433 3332221 2221 1112344444443332211100 0 00
Q ss_pred CC----CceEEeCCCcchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEE----eCCeEEEcCEEEECCCCC---
Q 036458 220 GG----SPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVT----SEGETAKCKKVVCDPSYL--- 288 (445)
Q Consensus 220 g~----s~~~~p~gG~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~----~~g~~~~ad~VI~~~~~~--- 288 (445)
.. ..+++|++|++.|+++|++.+ |++|+++++|++|..+ +++ +.|+ .+|++++||+||++.+..
T Consensus 222 ~~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~-~~~-~~v~~~~~~~g~~~~ad~vV~a~~~~~~~ 296 (478)
T 2ivd_A 222 TAPKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLARE-DGG-WRLIIEEHGRRAELSVAQVVLAAPAHATA 296 (478)
T ss_dssp CSCCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC---C-CEEEEEETTEEEEEECSEEEECSCHHHHH
T ss_pred ccccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEec-CCe-EEEEEeecCCCceEEcCEEEECCCHHHHH
Confidence 12 467899999999999998765 6799999999999874 444 3454 367789999999986532
Q ss_pred ---Cc---cc----cc--cceEEEEEEeeccCCCCCCCCCceEEEeCCCcCCCCCCEEEEEec-CCccccCCCcEEEEEE
Q 036458 289 ---PD---KV----QK--VGKVARAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCS-YAHNVAPNGQYIAFVS 355 (445)
Q Consensus 289 ---p~---~~----~~--~~~~~r~i~i~~~~i~~~~~~~~~~i~~p~~~~~~~~~i~v~~~s-~~~~~aP~G~~~~~vs 355 (445)
|. .. +. ...+.+..+.++++.... .....+++|... ......+...+ ..+..+|+|..++.+.
T Consensus 297 ~ll~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~s~~~~~~~p~g~~~l~~~ 372 (478)
T 2ivd_A 297 KLLRPLDDALAALVAGIAYAPIAVVHLGFDAGTLPA--PDGFGFLVPAEE--QRRMLGAIHASTTFPFRAEGGRVLYSCM 372 (478)
T ss_dssp HHHTTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCC--CCSSEEECCGGG--CCSCCEEEEHHHHCGGGBSTTCEEEEEE
T ss_pred HHhhccCHHHHHHHhcCCCCcEEEEEEEEccccCCC--CCceEEEecCCC--CCceEEEEEEcccCCCcCCCCCEEEEEE
Confidence 21 10 11 234455556667664211 123445566432 11222333333 3456789998766544
Q ss_pred eeeCC------CCcccccHhHHh----hcCCccc----ceeeeee---ccccCC--------C--CCCCcEEEccCCCCC
Q 036458 356 TEAET------DNPEVELKPGID----LLGPVDE----IFFDTYD---RFVPTN--------N--HEADHCFISTSYDAT 408 (445)
Q Consensus 356 t~~~~------~~~~~~l~~~~~----~l~~~~~----~~~~~~~---~~~~~~--------~--~~~~~~~~~~~~d~~ 408 (445)
+..+. .+.++..+.+++ +++...+ ....|.. .|.+-. . ...+|+|++..+-..
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~g 452 (478)
T 2ivd_A 373 VGGARQPGLVEQDEDALAALAREELKALAGVTARPSFTRVFRWPLGIPQYNLGHLERVAAIDAALQRLPGLHLIGNAYKG 452 (478)
T ss_dssp EECTTCGGGGGSCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHTSTTEEECSTTTSC
T ss_pred eCCcCCccccCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEECCCcccCCCcCHHHHHHHHHHHHhhCCCEEEEccCCCC
Confidence 43221 122222223333 3332111 1111211 121110 0 003699999876445
Q ss_pred CccHhHHHHHHHHHHHhcC
Q 036458 409 THFESTVQDVLEMYTKITG 427 (445)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~ 427 (445)
...+.|+...+.+-++|.+
T Consensus 453 ~gv~gA~~SG~~aA~~i~~ 471 (478)
T 2ivd_A 453 VGLNDCIRNAAQLADALVA 471 (478)
T ss_dssp CSHHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 5689999999999888864
No 9
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.91 E-value=2.1e-22 Score=206.18 Aligned_cols=386 Identities=10% Similarity=0.109 Sum_probs=214.3
Q ss_pred CCC-cccEEEECCChhHHHHHHHhhhCC------CeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEE
Q 036458 1 MDE-DYDVIVLGTGLKECILSGVLSVDG------LKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNV 73 (445)
Q Consensus 1 m~~-~~DViIIGaGl~Gl~aA~~La~~G------~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i 73 (445)
|.. .+||+|||||++||+||+.|+++| ++|+|||+++++||+++|.+. .++.+
T Consensus 1 M~~~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~--------------------~g~~~ 60 (470)
T 3i6d_A 1 MSDGKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKK--------------------DGYII 60 (470)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECC--------------------TTCCE
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEecc--------------------CCEEe
Confidence 553 489999999999999999999999 999999999999999999887 46899
Q ss_pred ecccceeec-CchhHHHhhhccccCceeeEEecceEEEeCCeEEEccCCh--------HHHhhccccCchhHHHHHHHHH
Q 036458 74 DMIPKFMMA-NGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATD--------VEALKSPLMGLFEKRRARKFFI 144 (445)
Q Consensus 74 Dlgp~~l~~-~~~l~~~l~~~g~~~~l~~~~~~~~~~~~~g~~~~vp~~~--------~~~~~~~l~~~~~k~~~~~f~~ 144 (445)
|.|++++.. ...+.+++.++|+...+........+++.+|+.+.+|.+. ...+...+++..++.+ ....
T Consensus 61 d~G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~ 138 (470)
T 3i6d_A 61 ERGPDSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGKAR--AAMD 138 (470)
T ss_dssp ESSCCCEETTCTHHHHHHHHTTCCTTEEECCCCCEEEECSSCEEECCC---------------------CCSHH--HHHH
T ss_pred ccChhhhhhCCHHHHHHHHHcCCcceeecCCCCccEEEECCEEEECCCCcccCCcCchHHhhccCcCCHHHHHH--HhcC
Confidence 999998875 4467788888998876553323456677788888877542 1122222333322211 1111
Q ss_pred HHHhhhccCccccccccCCCCCHHHHHHHcCCChhHHH-HHHHH-hhccccCCCCCCcHHHHHHHHHHHHHHhhhc----
Q 036458 145 YVQEYEEDDPKSHEGLDLNKVTAREIISKYGLEDDTID-FIGHA-LALHINDSYLEEPAMDFVKRIKLYAESLARF---- 218 (445)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~-~i~~~-~~l~~~~~~~~~~~~~~l~~i~~~~~s~~~~---- 218 (445)
.+ . +. ....+..++.+|+++. +.....+ ++... ..++..+ ..+.++...+..+..+....+..
T Consensus 139 ~~---~---~~---~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~ 207 (470)
T 3i6d_A 139 FI---L---PA---SKTKDDQSLGEFFRRR-VGDEVVENLIEPLLSGIYAGD-IDKLSLMSTFPQFYQTEQKHRSLILGM 207 (470)
T ss_dssp HH---S---CC---CSSSSCCBHHHHHHHH-SCHHHHHHTHHHHHHHTTCSC-TTTBBHHHHCGGGCC------------
T ss_pred cc---c---CC---CCCCCCcCHHHHHHHh-cCHHHHHHhccchhcEEecCC-HHHhhHHHHHHHHHHHHHhcCcHHHHH
Confidence 11 1 11 0123468999999764 4444333 32222 1222211 11112222222111100000000
Q ss_pred --------------cCCCceEEeCCCcchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEEC
Q 036458 219 --------------QGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCD 284 (445)
Q Consensus 219 --------------~g~s~~~~p~gG~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~ 284 (445)
.....+.++++|++.|++++++.+.. ++|+++++|++|..+ ++.+...+.+|+++.||+||++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~-~~~~~v~~~~g~~~~ad~vi~a 284 (470)
T 3i6d_A 208 KKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSHS-GSCYSLELDNGVTLDADSVIVT 284 (470)
T ss_dssp -------------------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEEC-SSSEEEEESSSCEEEESEEEEC
T ss_pred HhhccccccccccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEEc-CCeEEEEECCCCEEECCEEEEC
Confidence 00236778999999999998875533 799999999999985 5554433357878999999998
Q ss_pred CCCC------Cc-cc----cc--cceEEEEEEeeccCCCCCCCCCceEEEeCCCcCCCCCCEEEEEe-c-CCccccCCCc
Q 036458 285 PSYL------PD-KV----QK--VGKVARAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCC-S-YAHNVAPNGQ 349 (445)
Q Consensus 285 ~~~~------p~-~~----~~--~~~~~r~i~i~~~~i~~~~~~~~~~i~~p~~~~~~~~~i~v~~~-s-~~~~~aP~G~ 349 (445)
.+.. +. .. +. ...+.+..+.++++.... ......+++|..+ ...++-... + ..+..+|.|.
T Consensus 285 ~p~~~~~~l~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~~~~g~l~~~~~---~~~~~~~~~~s~~~~~~~p~~~ 360 (470)
T 3i6d_A 285 APHKAAAGMLSELPAISHLKNMHSTSVANVALGFPEGSVQM-EHEGTGFVISRNS---DFAITACTWTNKKWPHAAPEGK 360 (470)
T ss_dssp SCHHHHHHHTTTSTTHHHHHTCEEEEEEEEEEEESSTTCCC-SSCSSEEEECSTT---CCSEEEEEEHHHHCGGGSCTTC
T ss_pred CCHHHHHHHcCCchhhHHHhcCCCCceEEEEEEECchhcCC-CCCCeEEEccCCC---CCCceEEEEEcCcCCCcCCCCC
Confidence 6532 11 00 11 123444555567665321 1234456677542 123332222 2 2356789998
Q ss_pred EEEEEEeeeCC------CCcccccHhHHhhcCCc----cc-cee---eeee---ccccCC--------C---CCCCcEEE
Q 036458 350 YIAFVSTEAET------DNPEVELKPGIDLLGPV----DE-IFF---DTYD---RFVPTN--------N---HEADHCFI 401 (445)
Q Consensus 350 ~~~~vst~~~~------~~~~~~l~~~~~~l~~~----~~-~~~---~~~~---~~~~~~--------~---~~~~~~~~ 401 (445)
.++.+....+. .++++.++.+++.|..+ .+ .+. .|.. .|.+-. . ....||++
T Consensus 361 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~ 440 (470)
T 3i6d_A 361 TLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNINGEPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYM 440 (470)
T ss_dssp EEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGGSCCCSCCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEE
T ss_pred EEEEEEECCCCCccccCCCHHHHHHHHHHHHHHHhCCCCCceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEE
Confidence 77655542221 12233334444433211 11 111 1221 122110 0 01268999
Q ss_pred ccCCCCCCccHhHHHHHHHHHHHhc
Q 036458 402 STSYDATTHFESTVQDVLEMYTKIT 426 (445)
Q Consensus 402 ~~~~d~~~~~~~~~~~~~~~~~~~~ 426 (445)
+...-.....+.|+...+.+-++|.
T Consensus 441 aG~~~~g~gv~~a~~sG~~aA~~i~ 465 (470)
T 3i6d_A 441 TGASFEGVGIPDCIDQGKAAVSDAL 465 (470)
T ss_dssp CSTTTSCCSHHHHHHHHHHHHHHHH
T ss_pred EeecCCCCCHHHHHHHHHHHHHHHH
Confidence 9875556678999998888877764
No 10
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.90 E-value=2.2e-22 Score=206.85 Aligned_cols=385 Identities=12% Similarity=0.074 Sum_probs=222.9
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC--eEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccceeec
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL--KVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFMMA 82 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l~~ 82 (445)
+||+|||||++||+||++|+++|+ +|+|||+++++||+++|.+.. .++.+|.||+++..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~-------------------~g~~~d~G~~~~~~ 63 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGP-------------------NGAIFELGPRGIRP 63 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECT-------------------TSCEEESSCCCBCC
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEecc-------------------CCeEEEeCCCcccC
Confidence 699999999999999999999999 999999999999999997752 36999999999865
Q ss_pred C----chhHHHhhhccccCceeeEEe-----cceEEEeCCeEEEccCChHHHhhccccCchhHHHHHHHHHHHHhhhccC
Q 036458 83 N----GGLVRILIHTDVTKYLNFKAV-----DGSFVYNKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDD 153 (445)
Q Consensus 83 ~----~~l~~~l~~~g~~~~l~~~~~-----~~~~~~~~g~~~~vp~~~~~~~~~~l~~~~~k~~~~~f~~~~~~~~~~~ 153 (445)
. ..+.+++.++|+.+.+..... ...|++.+|+++++|.+....+.. ...+.+....+ .+.++..
T Consensus 64 ~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~--~~~~~~~~~~~---~~~~~~~-- 136 (477)
T 3nks_A 64 AGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRP--SPPFSKPLFWA---GLRELTK-- 136 (477)
T ss_dssp CHHHHHHHHHHHHHTTCGGGEEEECTTSHHHHCEEEEETTEEEECCCSSCC---C--CTTSCSCSSHH---HHTTTTS--
T ss_pred CCcccHHHHHHHHHcCCcceeeecCCCCchhcceEEEECCEEEECCCChhhcccc--cchhhhHHHHH---HHHhhhc--
Confidence 3 246677788888765443321 125678899999999763222211 11111111111 1122111
Q ss_pred ccccccccCCCCCHHHHHHHcCCChhHHH-HHHHHh-hccccCCCCCCcHHHHHHHHHHHHHHhh---------------
Q 036458 154 PKSHEGLDLNKVTAREIISKYGLEDDTID-FIGHAL-ALHINDSYLEEPAMDFVKRIKLYAESLA--------------- 216 (445)
Q Consensus 154 ~~~~~~~~~~~~s~~~~~~~~~l~~~~~~-~i~~~~-~l~~~~~~~~~~~~~~l~~i~~~~~s~~--------------- 216 (445)
+. . .....++.+|+++. +.+...+ ++.... .++..+ ..+.++...+..+.......+
T Consensus 137 ~~--~--~~~~~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~-~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~ 210 (477)
T 3nks_A 137 PR--G--KEPDETVHSFAQRR-LGPEVASLAMDSLCRGVFAGN-SRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQ 210 (477)
T ss_dssp CC--C--CSSCCBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSC-TTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----C
T ss_pred CC--C--CCCCcCHHHHHHHh-hCHHHHHHHHHHHhcccccCC-HHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccC
Confidence 11 1 12457899998763 3344333 222221 222211 112244444443322111111
Q ss_pred ---------hccCCCceEEeCCCcchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCC
Q 036458 217 ---------RFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSY 287 (445)
Q Consensus 217 ---------~~~g~s~~~~p~gG~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~ 287 (445)
.. ...+++++++|++.|+++|++.+...|++|+++++|++|..+ +++.+.|+++++++.||+||++.+.
T Consensus 211 ~~~~~~~~~~~-~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~-~~~~~~v~~~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 211 PDSALIRQALA-ERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQ-AEGRWKVSLRDSSLEADHVISAIPA 288 (477)
T ss_dssp CCCHHHHHHHH-TTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEC-GGGCEEEECSSCEEEESEEEECSCH
T ss_pred Cchhhhhhhcc-cCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEc-CCceEEEEECCeEEEcCEEEECCCH
Confidence 01 133578999999999999999999999999999999999884 4443456777778999999998653
Q ss_pred C------Cccc-------ccc--ceEEEEEEeeccCCCCCCCCCceEEEeCCCcCCCCCCEEEEEec--CCcccc-CCCc
Q 036458 288 L------PDKV-------QKV--GKVARAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCS--YAHNVA-PNGQ 349 (445)
Q Consensus 288 ~------p~~~-------~~~--~~~~r~i~i~~~~i~~~~~~~~~~i~~p~~~~~~~~~i~v~~~s--~~~~~a-P~G~ 349 (445)
. +... ..+ ..+....+.++++... ......++|..+ +..+.-.... .-+... |+|.
T Consensus 289 ~~~~~ll~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~---~~~~g~l~~~~~---~~~~~~~~~~s~~~~~~~~~~~~ 362 (477)
T 3nks_A 289 SVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAHLP---VQGFGHLVPSSE---DPGVLGIVYDSVAFPEQDGSPPG 362 (477)
T ss_dssp HHHHHHSCGGGHHHHHHHHTCCEEEEEEEEEEETTCCCS---SCSSEEECCTTT---CSSEEEEECHHHHCGGGSTTTTC
T ss_pred HHHHHhccccCHHHHHHHhcCCCCcEEEEEEEECCCCCC---CCCceEEccCCC---CCCceEEEEeccccCCCCCCCCc
Confidence 2 2111 011 1233334445565421 123355666542 1223222222 223332 3477
Q ss_pred EEEEEEeeeC----------CCCcccccHhHHh----hcCCcc-ccee---eeee---ccccC--------CC---CCCC
Q 036458 350 YIAFVSTEAE----------TDNPEVELKPGID----LLGPVD-EIFF---DTYD---RFVPT--------NN---HEAD 397 (445)
Q Consensus 350 ~~~~vst~~~----------~~~~~~~l~~~~~----~l~~~~-~~~~---~~~~---~~~~~--------~~---~~~~ 397 (445)
.++.+....+ ..++++.++.+++ +|+... ..+. .+.. .|.+- .. ....
T Consensus 363 ~~l~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~ 442 (477)
T 3nks_A 363 LRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRL 442 (477)
T ss_dssp EEEEEEECHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEECCccccccccccCCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCC
Confidence 7665444211 0133333444443 343211 1111 1111 12211 00 0136
Q ss_pred cEEEccCCCCCCccHhHHHHHHHHHHHhcCCC
Q 036458 398 HCFISTSYDATTHFESTVQDVLEMYTKITGKA 429 (445)
Q Consensus 398 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 429 (445)
+++++..+-.+...++|+...+.+-++|.+++
T Consensus 443 ~l~l~G~~~~G~gv~~a~~sg~~aA~~il~~~ 474 (477)
T 3nks_A 443 PLTLAGASYEGVAVNDCIESGRQAAVSVLGTE 474 (477)
T ss_dssp SEEECSTTTSCCSHHHHHHHHHHHHHHHHHCC
T ss_pred CEEEEccCCCCCcHHHHHHHHHHHHHHHHhcc
Confidence 89999887777788999999999999997653
No 11
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.90 E-value=6.2e-23 Score=212.76 Aligned_cols=246 Identities=16% Similarity=0.142 Sum_probs=148.4
Q ss_pred cccEEEECCChhHHHHHHHhhh-CCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccceeec
Q 036458 4 DYDVIVLGTGLKECILSGVLSV-DGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFMMA 82 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l~~ 82 (445)
.+||||||||++||+||++|++ .|++|+|||+++++||+++|+... .||.+|.|||+++.
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~-------------------~G~~~D~G~h~~~~ 70 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTP-------------------EGFLYDVGGHVIFS 70 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECT-------------------TSCEEESSCCCCCC
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEec-------------------CCEEEEeCceEecC
Confidence 5899999999999999999998 499999999999999999986431 47999999999986
Q ss_pred Cc-hhHHHhhhccccCceeeEEe-cceEEEeCCeEEEccCChHHHhhccccCchhH-HHHHHHHHHHHhhhccCcccccc
Q 036458 83 NG-GLVRILIHTDVTKYLNFKAV-DGSFVYNKGKIYKVPATDVEALKSPLMGLFEK-RRARKFFIYVQEYEEDDPKSHEG 159 (445)
Q Consensus 83 ~~-~l~~~l~~~g~~~~l~~~~~-~~~~~~~~g~~~~vp~~~~~~~~~~l~~~~~k-~~~~~f~~~~~~~~~~~~~~~~~ 159 (445)
.. .+.+++.+.+... .+|... ...+++.+|+.+++|.. .... .+..... +....++....... .+
T Consensus 71 ~~~~v~~l~~e~~~~~-~~~~~~~~~~~i~~~g~~~~~p~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~----- 138 (513)
T 4gde_A 71 HYKYFDDCLDEALPKE-DDWYTHQRISYVRCQGQWVPYPFQ-NNIS---MLPKEEQVKCIDGMIDAALEAR--VA----- 138 (513)
T ss_dssp CBHHHHHHHHHHSCSG-GGEEEEECCEEEEETTEEEESSGG-GGGG---GSCHHHHHHHHHHHHHHHHHHH--TC-----
T ss_pred CCHHHHHHHHHhCCcc-ceeEEecCceEEEECCeEeecchh-hhhh---hcchhhHHHHHHHHHHHHHhhh--cc-----
Confidence 54 5566666665432 234333 34567889999988843 1111 1111111 11122222111110 01
Q ss_pred ccCCCCCHHHHHHHcCCChhHHHH-HHHH-hhccc----------cCCCCCCcHH-HHHHHHHHHHHHhhhccCCCceEE
Q 036458 160 LDLNKVTAREIISKYGLEDDTIDF-IGHA-LALHI----------NDSYLEEPAM-DFVKRIKLYAESLARFQGGSPYIY 226 (445)
Q Consensus 160 ~~~~~~s~~~~~~~~~l~~~~~~~-i~~~-~~l~~----------~~~~~~~~~~-~~l~~i~~~~~s~~~~~g~s~~~~ 226 (445)
.....++.+|+.+. +.+.+.+. +... ..++. ....+..+.. ..+...... .....+.....+.|
T Consensus 139 -~~~~~s~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 215 (513)
T 4gde_A 139 -NTKPKTFDEWIVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILG-KTAGNWGPNATFRF 215 (513)
T ss_dssp -CSCCCSHHHHHHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHT-CCCCSCBTTBEEEE
T ss_pred -cccccCHHHHHHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhc-ccccccccccceee
Confidence 11346788876532 22222221 1111 11111 0011111111 111111000 00111101334455
Q ss_pred e-CCCcchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCC
Q 036458 227 P-LYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPS 286 (445)
Q Consensus 227 p-~gG~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~ 286 (445)
| ++|++.|++++++.+...|+++++|++|++|..+ ++++ +..+|+++.||+||++.+
T Consensus 216 ~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~-~~~v--~~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 216 PARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNAN-NKTV--TLQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp ESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETT-TTEE--EETTSCEEEEEEEEECSC
T ss_pred cccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEcc-CCEE--EEcCCCEEECCEEEECCC
Confidence 5 7999999999999999999999999999999873 5432 456899999999999865
No 12
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.90 E-value=1.8e-21 Score=201.58 Aligned_cols=394 Identities=12% Similarity=0.098 Sum_probs=216.3
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEeccccee
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFM 80 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l 80 (445)
|.+.+||+|||||++||+||+.|+++|++|+|+|+++++||++.|++. .+|.+|.|++++
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~--------------------~g~~~~~g~~~~ 69 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQ--------------------DGLIWDEGANTM 69 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEE--------------------TTEEEESSCCCB
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecc--------------------CCeEEecCCccc
Confidence 555789999999999999999999999999999999999999999887 469999999998
Q ss_pred ecC-chhHHHhhhccccCceeeEEe-cceEEEeCCeEEEccCChHHHhhccccCchhHHHHHHHHHHHHhhhccCccccc
Q 036458 81 MAN-GGLVRILIHTDVTKYLNFKAV-DGSFVYNKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHE 158 (445)
Q Consensus 81 ~~~-~~l~~~l~~~g~~~~l~~~~~-~~~~~~~~g~~~~vp~~~~~~~~~~l~~~~~k~~~~~f~~~~~~~~~~~~~~~~ 158 (445)
... ..+.+++.++|+.+.+.|... ...|++.+|+.+.+|.+....+...+++..++.+. +...+... ...+ ..
T Consensus 70 ~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~--~~ 144 (504)
T 1sez_A 70 TESEGDVTFLIDSLGLREKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQM--LLEPILWK-NKKL--SQ 144 (504)
T ss_dssp CCCSHHHHHHHHHTTCGGGEECCSSCCCEEEESSSSEEECCSSHHHHHHSSSSCHHHHHHH--HTHHHHC----------
T ss_pred ccCcHHHHHHHHHcCCcccceeccCCCceEEEECCeEEECCCCHHHHhccccCCHHHHHHH--hHhhhccC-cccc--cc
Confidence 754 467788888998776655432 23457778999999988555555555554433221 11111100 0000 00
Q ss_pred cccCCCCCHHHHHHHcCCChhHHH-HHHHHh-hccccCCCCCCcHHHHHHHHHHHHH-----------H-hhhccC----
Q 036458 159 GLDLNKVTAREIISKYGLEDDTID-FIGHAL-ALHINDSYLEEPAMDFVKRIKLYAE-----------S-LARFQG---- 220 (445)
Q Consensus 159 ~~~~~~~s~~~~~~~~~l~~~~~~-~i~~~~-~l~~~~~~~~~~~~~~l~~i~~~~~-----------s-~~~~~g---- 220 (445)
......|+.+|+++. +.+...+ ++.... ..+..+ ..+.++...+..+..... . +....+
T Consensus 145 -~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 221 (504)
T 1sez_A 145 -VSDSHESVSGFFQRH-FGKEVVDYLIDPFVAGTCGGD-PDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQG 221 (504)
T ss_dssp ----CCCBHHHHHHHH-HCHHHHHTTHHHHHHHHHSCC-GGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC--------
T ss_pred -cCCCCccHHHHHHHH-cCHHHHHHHHHHHHccccCCC-hHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhccccccccc
Confidence 012348999999764 4444433 332221 222211 112233333222211110 0 011000
Q ss_pred ----------CCceEEeCCCcchHHHHHHHHHHHcC-cEEEeCCcceeEEEcCCCc----EEEEE--e-CC---eEEEcC
Q 036458 221 ----------GSPYIYPLYGLGELPQAFARLSAVYG-GTYMLNKPECKVEFDGDGK----VIGVT--S-EG---ETAKCK 279 (445)
Q Consensus 221 ----------~s~~~~p~gG~~~L~q~l~r~~~~~G-g~i~l~~~V~~I~~~~~g~----~~~v~--~-~g---~~~~ad 279 (445)
...+++++||+++|+++|++ ..| ++|++|++|++|..++++. .+.|+ . +| ++++||
T Consensus 222 ~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~---~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad 298 (504)
T 1sez_A 222 PPKTSANKKRQRGSFSFLGGMQTLTDAICK---DLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFD 298 (504)
T ss_dssp --CCCSCCSTTCSCBEETTCTHHHHHHHHT---TSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEES
T ss_pred ccchhhccccCCceEeeCcHHHHHHHHHHh---hcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECC
Confidence 11356889999999998886 345 7899999999999854441 13343 2 45 578999
Q ss_pred EEEECCCCC------C-----c---c-cccc--ceEEEEEEeeccCCCCCCCCCceEEEeCCCcCCCCCCEEE-EEec-C
Q 036458 280 KVVCDPSYL------P-----D---K-VQKV--GKVARAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYL-FCCS-Y 340 (445)
Q Consensus 280 ~VI~~~~~~------p-----~---~-~~~~--~~~~r~i~i~~~~i~~~~~~~~~~i~~p~~~~~~~~~i~v-~~~s-~ 340 (445)
+||++.+.. + . . .+.. ..+....+.++++... .....+.+++|..+......++- ...+ .
T Consensus 299 ~VI~a~p~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~-~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~ 377 (504)
T 1sez_A 299 AVIMTAPLCDVKSMKIAKRGNPFLLNFIPEVDYVPLSVVITTFKRENVK-YPLEGFGVLVPSKEQQHGLKTLGTLFSSMM 377 (504)
T ss_dssp EEEECSCHHHHHTSEEESSSSBCCCTTSCCCCEEEEEEEEEEEEGGGBS-SCCCSSEEECCGGGGGGTCCSSEEEEHHHH
T ss_pred EEEECCCHHHHHHHhhcccCCcccHHHHhcCCCCceEEEEEEEchhhcC-CCCCceEEEcCCCCCCCCCccceEEeeccc
Confidence 999986531 0 0 0 1111 1233334445554311 11234567777543110111211 1122 3
Q ss_pred CccccCCCcEEEEEEeeeCC------CCcccccHhHHhh----cCCcc-ccee---eeee---ccccC--------CC--
Q 036458 341 AHNVAPNGQYIAFVSTEAET------DNPEVELKPGIDL----LGPVD-EIFF---DTYD---RFVPT--------NN-- 393 (445)
Q Consensus 341 ~~~~aP~G~~~~~vst~~~~------~~~~~~l~~~~~~----l~~~~-~~~~---~~~~---~~~~~--------~~-- 393 (445)
.+..+|+|+.++...+.... .+.++.++.+++. ++... .... .|.. .|.+- ..
T Consensus 378 ~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~ 457 (504)
T 1sez_A 378 FPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEPTYVNHLYWSKAFPLYGHNYDSVLDAIDKME 457 (504)
T ss_dssp CGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCSCCSSEEEEEEEEEEECCCTTHHHHHHHHHHHH
T ss_pred cCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEeECCCCCCccCcCHHHHHHHHHHHH
Confidence 45678999876644432211 1223334444443 33211 1111 1111 12111 00
Q ss_pred CCCCcEEEccCCCCCCccHhHHHHHHHHHHHhc
Q 036458 394 HEADHCFISTSYDATTHFESTVQDVLEMYTKIT 426 (445)
Q Consensus 394 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 426 (445)
....|+|+++..-.+...+.|+...++.=++|.
T Consensus 458 ~~~~~l~~aG~~~~g~~v~gai~sG~~aA~~il 490 (504)
T 1sez_A 458 KNLPGLFYAGNHRGGLSVGKALSSGCNAADLVI 490 (504)
T ss_dssp HHSTTEEECCSSSSCSSHHHHHHHHHHHHHHHH
T ss_pred HhCCCEEEEeecCCCCCHHHHHHHHHHHHHHHH
Confidence 013689998765445567888877777666664
No 13
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.90 E-value=4.6e-22 Score=207.06 Aligned_cols=256 Identities=17% Similarity=0.235 Sum_probs=163.7
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEeccccee
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFM 80 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l 80 (445)
|...+||||||||++||+||+.|+++|++|+|+|+++++||++.|++.. .++.+|+|++++
T Consensus 1 m~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~-------------------~g~~~d~G~~~~ 61 (520)
T 1s3e_A 1 MSNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQ-------------------KVKYVDLGGSYV 61 (520)
T ss_dssp --CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCT-------------------TTSCEESSCCEE
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccC-------------------CCcccccCceEe
Confidence 7788999999999999999999999999999999999999999998862 258999999999
Q ss_pred ecC-chhHHHhhhccccCceeeEEecceEEEeCCeEEEccCChHHHhhccccCchhHHHHHHHHHHHHhhhccCc--ccc
Q 036458 81 MAN-GGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDP--KSH 157 (445)
Q Consensus 81 ~~~-~~l~~~l~~~g~~~~l~~~~~~~~~~~~~g~~~~vp~~~~~~~~~~l~~~~~k~~~~~f~~~~~~~~~~~~--~~~ 157 (445)
... ..+.+++.+.|+..+..+.. ...+++.+|+.+.++.. +. ......+...+.+++..+..+....+ ..+
T Consensus 62 ~~~~~~~~~l~~~lgl~~~~~~~~-~~~~~~~~g~~~~~~~~----~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (520)
T 1s3e_A 62 GPTQNRILRLAKELGLETYKVNEV-ERLIHHVKGKSYPFRGP----FP-PVWNPITYLDHNNFWRTMDDMGREIPSDAPW 135 (520)
T ss_dssp CTTCHHHHHHHHHTTCCEEECCCS-SEEEEEETTEEEEECSS----SC-CCCSHHHHHHHHHHHHHHHHHHTTSCTTCGG
T ss_pred cCCcHHHHHHHHHcCCcceecccC-CceEEEECCEEEEecCC----CC-CCCCHHHHHHHHHHHHHHHHHHhhcCcCCCc
Confidence 754 46777788888764332211 22334567777666533 00 01122223334444444333322111 001
Q ss_pred cc---ccCCCCCHHHHHHHcCCChhHHHHHHHHhh-ccccCCCCCCcHHHHHHHHHHHHHH---hhhccCCCceEEeCCC
Q 036458 158 EG---LDLNKVTAREIISKYGLEDDTIDFIGHALA-LHINDSYLEEPAMDFVKRIKLYAES---LARFQGGSPYIYPLYG 230 (445)
Q Consensus 158 ~~---~~~~~~s~~~~~~~~~l~~~~~~~i~~~~~-l~~~~~~~~~~~~~~l~~i~~~~~s---~~~~~g~s~~~~p~gG 230 (445)
.. ......|+.+|+++...++.+..++..... .+.. +..+.++...+..+..+... +..- ....+.++.+|
T Consensus 136 ~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~g~-~~~~~s~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~gG 213 (520)
T 1s3e_A 136 KAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVTA-ETHEVSALWFLWYVKQCGGTTRIISTT-NGGQERKFVGG 213 (520)
T ss_dssp GSTTHHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHHHHSS-CTTTSBHHHHHHHHHTTTCHHHHHCST-TSTTSEEETTC
T ss_pred cccchhhhhccCHHHHHHhhCCCHHHHHHHHHHHhhhcCC-ChHHhHHHHHHHHHhhcCchhhhcccC-CCcceEEEeCC
Confidence 10 012458999999988888888776644332 2221 12233555444332211000 0000 12345789999
Q ss_pred cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCC
Q 036458 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSY 287 (445)
Q Consensus 231 ~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~ 287 (445)
+++|++++++.+ |++|++|++|++|..+ ++++.....+|+++.||+||++.+.
T Consensus 214 ~~~l~~~l~~~l---g~~i~~~~~V~~i~~~-~~~v~v~~~~g~~~~ad~VI~a~p~ 266 (520)
T 1s3e_A 214 SGQVSERIMDLL---GDRVKLERPVIYIDQT-RENVLVETLNHEMYEAKYVISAIPP 266 (520)
T ss_dssp THHHHHHHHHHH---GGGEESSCCEEEEECS-SSSEEEEETTSCEEEESEEEECSCG
T ss_pred HHHHHHHHHHHc---CCcEEcCCeeEEEEEC-CCeEEEEECCCeEEEeCEEEECCCH
Confidence 999999998654 7899999999999874 5566533357889999999998653
No 14
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.90 E-value=2.2e-21 Score=199.42 Aligned_cols=386 Identities=11% Similarity=0.140 Sum_probs=222.9
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCC--CeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDG--LKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPK 78 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G--~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~ 78 (445)
|. .+||+|||||++||++|+.|+++| ++|+|||+++++||+++|.+. .+|.+|.|++
T Consensus 2 m~-~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~--------------------~g~~~~~g~~ 60 (475)
T 3lov_A 2 MS-SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYRE--------------------DGFTIERGPD 60 (475)
T ss_dssp CC-SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECS--------------------TTCCEESSCC
T ss_pred CC-cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEee--------------------CCEEEecCch
Confidence 54 589999999999999999999999 999999999999999999887 4689999999
Q ss_pred eeec-CchhHHHhhhccccCceeeEEecceEEEeCCeEEEccCC--------hHHHhhccccCchhHHHHHHHHHHHHhh
Q 036458 79 FMMA-NGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVPAT--------DVEALKSPLMGLFEKRRARKFFIYVQEY 149 (445)
Q Consensus 79 ~l~~-~~~l~~~l~~~g~~~~l~~~~~~~~~~~~~g~~~~vp~~--------~~~~~~~~l~~~~~k~~~~~f~~~~~~~ 149 (445)
++.. ...+.+++.++|+...+........+++.+|+.+.+|.. ....+...+++..++. .+.......
T Consensus 61 ~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 137 (475)
T 3lov_A 61 SYVARKHILTDLIEAIGLGEKLVRNNTSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQTTLLTEEEKQ---EVADLLLHP 137 (475)
T ss_dssp CEETTSTHHHHHHHHTTCGGGEEECCCCCEEEEETTEEEECCSSEETTEESCHHHHTTCSSSCHHHHH---HHHHHHHSC
T ss_pred hhhcccHHHHHHHHHcCCcceEeecCCCceEEEECCEEEECCCcccccCcCchHHHhhccCCChhHHH---HhhCcccCC
Confidence 8875 456778888899876655432445677888988887754 2344445556555443 222221111
Q ss_pred hccCccccccccCCCCCHHHHHHHcCCChhHHH-HHHHHh-hccccCCCCCCcHHHHHHHHHHHHHHhhh-------c--
Q 036458 150 EEDDPKSHEGLDLNKVTAREIISKYGLEDDTID-FIGHAL-ALHINDSYLEEPAMDFVKRIKLYAESLAR-------F-- 218 (445)
Q Consensus 150 ~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~-~i~~~~-~l~~~~~~~~~~~~~~l~~i~~~~~s~~~-------~-- 218 (445)
..+ .....+..++.+|+++. +.+...+ ++.... ..+..+ ..+.++...+..+..+....+. .
T Consensus 138 --~~~---~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~-~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~ 210 (475)
T 3lov_A 138 --SDS---LRIPEQDIPLGEYLRPR-LGDALVEKLIEPLLSGIYAGN-IDQMSTFATYPQFVANEQKAGSLFEGMRLMRP 210 (475)
T ss_dssp --CTT---CCCCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHGGGCCC-TTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC
T ss_pred --ccc---ccCCCCCcCHHHHHHHH-hCHHHHHHHHHHHhceeecCC-hHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcc
Confidence 000 00123468999999763 3444433 332222 222211 1111222122222211111100 0
Q ss_pred ------------cCCCceEEeCCCcchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEECC
Q 036458 219 ------------QGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS-EGETAKCKKVVCDP 285 (445)
Q Consensus 219 ------------~g~s~~~~p~gG~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~-~g~~~~ad~VI~~~ 285 (445)
..+..+.++++|++.|++++++.+.. ++|+++++|++|..+ ++.+ .|++ +| ++.||+||++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~-~~~~-~v~~~~g-~~~ad~vV~a~ 285 (475)
T 3lov_A 211 LDQLPQTPQTTIKATGQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISRE-DGRY-RLKTDHG-PEYADYVLLTI 285 (475)
T ss_dssp --------------CCSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEE-TTEE-EEECTTC-CEEESEEEECS
T ss_pred cccccccccccccCCCcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEe-CCEE-EEEECCC-eEECCEEEECC
Confidence 01346789999999999999876543 799999999999984 4444 3554 66 89999999986
Q ss_pred CCC------Ccc----ccc--cceEEEEEEeeccCCCCCCCCCceEEEeCCCcCCCCCCEEEEEe-c-CCccccCCCcEE
Q 036458 286 SYL------PDK----VQK--VGKVARAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCC-S-YAHNVAPNGQYI 351 (445)
Q Consensus 286 ~~~------p~~----~~~--~~~~~r~i~i~~~~i~~~~~~~~~~i~~p~~~~~~~~~i~v~~~-s-~~~~~aP~G~~~ 351 (445)
+.. +.. ... ...+.+..+.++++. .. ......+++|..+ ...++-+.. + ..+..+|. ..+
T Consensus 286 p~~~~~~ll~~~~~~~~~~~~~~~~~~v~l~~~~~~-~~-~~~g~g~l~~~~~---~~~~~~~~~~s~~~~~~~p~-~~~ 359 (475)
T 3lov_A 286 PHPQVVQLLPDAHLPELEQLTTHSTATVTMIFDQQQ-SL-PIEGTGFVVNRRA---PYSITACTAIDQKWNHSAPD-HTV 359 (475)
T ss_dssp CHHHHHHHCTTSCCHHHHTCCEEEEEEEEEEEECCS-SC-SSSSSEEEECTTS---SCSEEEEEEHHHHCTTTCTT-EEE
T ss_pred CHHHHHHHcCccCHHHHhcCCCCeEEEEEEEECCcC-CC-CCCCEEEEecCCC---CCceEEEEEEcccCCCCCCC-cEE
Confidence 532 110 001 123444555567766 22 1234456666543 223433332 2 23455676 444
Q ss_pred EEEEeeeCC------CCcccccHhHHhh----cCCc-cccee---eeee---ccccCC--------C---CCCCcEEEcc
Q 036458 352 AFVSTEAET------DNPEVELKPGIDL----LGPV-DEIFF---DTYD---RFVPTN--------N---HEADHCFIST 403 (445)
Q Consensus 352 ~~vst~~~~------~~~~~~l~~~~~~----l~~~-~~~~~---~~~~---~~~~~~--------~---~~~~~~~~~~ 403 (445)
+......+. .+.++.++.+++. ++.- ...+. .|.. .|.+-. . ...+|+|++.
T Consensus 360 l~~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~~~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG 439 (475)
T 3lov_A 360 LRAFVGRPGNDHLVHESDEVLQQAVLQDLEKICGRTLEPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAG 439 (475)
T ss_dssp EEEEECBTTBCGGGGSCHHHHHHHHHHHHHHHHSSCCCCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECS
T ss_pred EEEEeCCCCCCcccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEc
Confidence 433332111 1223333334433 3311 11111 1221 222110 0 0126899998
Q ss_pred CCCCCCccHhHHHHHHHHHHHhcCC
Q 036458 404 SYDATTHFESTVQDVLEMYTKITGK 428 (445)
Q Consensus 404 ~~d~~~~~~~~~~~~~~~~~~~~~~ 428 (445)
..-.....+.|+...+.+-++|...
T Consensus 440 ~~~~g~g~~~a~~sG~~aA~~i~~~ 464 (475)
T 3lov_A 440 LAYDGVGLPDCVASAKTMIESIELE 464 (475)
T ss_dssp TTTSCSSHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 6555667899999999999888653
No 15
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.89 E-value=1.3e-22 Score=209.73 Aligned_cols=255 Identities=17% Similarity=0.140 Sum_probs=163.2
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccceeec-
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFMMA- 82 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l~~- 82 (445)
++||+|||||++||+||+.|+++|++|+|||+++++||++.|++. .++.+|+|++++..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~--------------------~g~~~d~G~~~~~~~ 98 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNI--------------------DGYPYEMGGTWVHWH 98 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEE--------------------TTEEEECSCCCBCTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceeccc--------------------CCeeecCCCeEecCc
Confidence 489999999999999999999999999999999999999999887 46999999999974
Q ss_pred CchhHHHhhhccccCceeeEE----ecceEEEeC--CeEEEccCChHHHhhccccCchhHHHHHHHHHHHH-hhhccCcc
Q 036458 83 NGGLVRILIHTDVTKYLNFKA----VDGSFVYNK--GKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQ-EYEEDDPK 155 (445)
Q Consensus 83 ~~~l~~~l~~~g~~~~l~~~~----~~~~~~~~~--g~~~~vp~~~~~~~~~~l~~~~~k~~~~~f~~~~~-~~~~~~~~ 155 (445)
...+++++.++|+.+.+.... ....|++.+ |+...+|... +.. .+. ..+.+|+.... ......+.
T Consensus 99 ~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~----~~~-~~~~~~~~~~~~~~~~~~~~ 170 (495)
T 2vvm_A 99 QSHVWREITRYKMHNALSPSFNFSRGVNHFQLRTNPTTSTYMTHEA---EDE----LLR-SALHKFTNVDGTNGRTVLPF 170 (495)
T ss_dssp SHHHHHHHHHTTCTTCEEESCCCSSSCCEEEEESSTTCCEEECHHH---HHH----HHH-HHHHHHHCSSSSTTTTTCSC
T ss_pred cHHHHHHHHHcCCcceeecccccCCCceEEEecCCCCceeecCHHH---HHH----HHH-HHHHHHHccchhhhhhcCCC
Confidence 457778888888866554432 123455555 6666666321 100 011 11222222000 00000000
Q ss_pred cccc------ccCCCCCHHHHHHHcC--CChhHHHHHHHHhhccccCCCCCCcHHHHHHHHHHHHHHhhhccCCCceEEe
Q 036458 156 SHEG------LDLNKVTAREIISKYG--LEDDTIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYP 227 (445)
Q Consensus 156 ~~~~------~~~~~~s~~~~~~~~~--l~~~~~~~i~~~~~l~~~~~~~~~~~~~~l~~i~~~~~s~~~~~g~s~~~~p 227 (445)
.+.. ..++..|+.+|+++++ +++..+.++...+......+..+.++...+..+......+..+......+++
T Consensus 171 ~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (495)
T 2vvm_A 171 PHDMFYVPEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKF 250 (495)
T ss_dssp TTSTTSSTTHHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEE
T ss_pred CCCcccCcchhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEe
Confidence 0000 0124579999999887 8888777665443322212222335555544322110001100011234578
Q ss_pred CCCcchHHHHHHHHHHHcC-cEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCC
Q 036458 228 LYGLGELPQAFARLSAVYG-GTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSY 287 (445)
Q Consensus 228 ~gG~~~L~q~l~r~~~~~G-g~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~ 287 (445)
.+|+++|+++|++.+...| ++|+++++|++|..+ ++.+.....+|++++||+||++.+.
T Consensus 251 ~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~-~~~v~v~~~~g~~~~ad~vI~a~~~ 310 (495)
T 2vvm_A 251 KDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNE-RDAARVTARDGREFVAKRVVCTIPL 310 (495)
T ss_dssp TTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEEC-SSSEEEEETTCCEEEEEEEEECCCG
T ss_pred CCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEc-CCEEEEEECCCCEEEcCEEEECCCH
Confidence 9999999999999998888 999999999999884 5554433346778999999998663
No 16
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.87 E-value=3.1e-21 Score=197.11 Aligned_cols=253 Identities=14% Similarity=0.203 Sum_probs=156.6
Q ss_pred CC-CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccce
Q 036458 1 MD-EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKF 79 (445)
Q Consensus 1 m~-~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~ 79 (445)
|+ .++||+|||+|++||+||+.|+++|++|+|+|+++++||++.+.+. .++.+|+|+++
T Consensus 1 m~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~--------------------~g~~~~~g~~~ 60 (453)
T 2yg5_A 1 VPTLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTI--------------------DGAVLEIGGQW 60 (453)
T ss_dssp -CEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEE--------------------TTEEEECSCCC
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceecccc--------------------CCceeccCCeE
Confidence 54 4689999999999999999999999999999999999999999887 35899999999
Q ss_pred eecC-chhHHHhhhccccCceeeEEecceEE-EeC-CeEEEccCChHHHhhccccCchhHHHHHHHHHHHHh----hhcc
Q 036458 80 MMAN-GGLVRILIHTDVTKYLNFKAVDGSFV-YNK-GKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQE----YEED 152 (445)
Q Consensus 80 l~~~-~~l~~~l~~~g~~~~l~~~~~~~~~~-~~~-g~~~~vp~~~~~~~~~~l~~~~~k~~~~~f~~~~~~----~~~~ 152 (445)
+... ..+.+++.+.|+..+..+. +...+ +.+ |+.+.++.... .++......+.+++..+.. ....
T Consensus 61 ~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (453)
T 2yg5_A 61 VSPDQTALISLLDELGLKTFERYR--EGESVYISSAGERTRYTGDSF------PTNETTKKEMDRLIDEMDDLAAQIGAE 132 (453)
T ss_dssp BCTTCHHHHHHHHHTTCCEEECCC--CSEEEEECTTSCEEEECSSSC------SCCHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred ecCccHHHHHHHHHcCCccccccc--CCCEEEEeCCCceeeccCCCC------CCChhhHHHHHHHHHHHHHHHhhcCCC
Confidence 8753 4677788888876443332 12222 222 55555432200 0111111112222211111 1111
Q ss_pred Cccccc-cccCCCCCHHHHHHHcCCChhHHHHHHHHhh-ccccCCCC-CCcHHHHHHHHHHHHHHhhhc--cCCCceEEe
Q 036458 153 DPKSHE-GLDLNKVTAREIISKYGLEDDTIDFIGHALA-LHINDSYL-EEPAMDFVKRIKLYAESLARF--QGGSPYIYP 227 (445)
Q Consensus 153 ~~~~~~-~~~~~~~s~~~~~~~~~l~~~~~~~i~~~~~-l~~~~~~~-~~~~~~~l~~i~~~~~s~~~~--~g~s~~~~p 227 (445)
.+.... .......|+.+|+++++.++.++.++..... .+..+ .. +.++...+..+..+. ++... ..+....++
T Consensus 133 ~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~g-~~~~~~~~~~~~~~~~ 210 (453)
T 2yg5_A 133 EPWAHPLARDLDTVSFKQWLINQSDDAEARDNIGLFIAGGMLTK-PAHSFSALQAVLMAASAG-SFSHLVDEDFILDKRV 210 (453)
T ss_dssp CGGGSTTHHHHHSSBHHHHHHHHCSCHHHHHHHHHHHCCCCCCS-CTTSSBHHHHHHHHHHTT-CHHHHHCHHHHTCEEE
T ss_pred CCCCCcchhhhhhccHHHHHHhhcCCHHHHHHHHHHHHhhcccC-CcccccHHHHHHHhccCC-cHhhhccCCCcceEEE
Confidence 110000 0012458999999988888888876654432 22211 11 335554443322110 00000 001234689
Q ss_pred CCCcchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCC
Q 036458 228 LYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSY 287 (445)
Q Consensus 228 ~gG~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~ 287 (445)
++|++.|++++++. .|++|++|++|++|..+ +++.+.|+++|+++.||+||++.+.
T Consensus 211 ~gG~~~l~~~l~~~---lg~~i~~~~~V~~i~~~-~~~~v~v~~~~~~~~ad~VI~a~p~ 266 (453)
T 2yg5_A 211 IGGMQQVSIRMAEA---LGDDVFLNAPVRTVKWN-ESGATVLADGDIRVEASRVILAVPP 266 (453)
T ss_dssp TTCTHHHHHHHHHH---HGGGEECSCCEEEEEEE-TTEEEEEETTTEEEEEEEEEECSCG
T ss_pred cCChHHHHHHHHHh---cCCcEEcCCceEEEEEe-CCceEEEEECCeEEEcCEEEEcCCH
Confidence 99999999999864 37899999999999884 5542446678889999999998653
No 17
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.84 E-value=1.1e-19 Score=187.27 Aligned_cols=375 Identities=11% Similarity=0.102 Sum_probs=208.0
Q ss_pred CcccEEEECCChhHHHHHHHhhhCC-CeEEEEecCCCCCCccccc-chhhhhhhhcCCCCCCCccCCCCCeEEeccccee
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDG-LKVLHMDRNAYYGGESTSL-NLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFM 80 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~n~~~GG~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l 80 (445)
..+||+|||||++||++|+.|+++| ++|+|+|+++++||++.++ +. .+|.+|.|++++
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~--------------------~g~~~~~g~~~~ 67 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDE--------------------NGFTWDLGGHVI 67 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECT--------------------TSCEEESSCCCB
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecC--------------------CCcEEeeCCccc
Confidence 4689999999999999999999999 8999999999999999996 44 479999999998
Q ss_pred ecCch-hHHHhhhccccCceeeEEecceEEEeCCeEEEccCChHHHhhccccCchhH-HHHHHHHHHHHhhhccCccccc
Q 036458 81 MANGG-LVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLFEK-RRARKFFIYVQEYEEDDPKSHE 158 (445)
Q Consensus 81 ~~~~~-l~~~l~~~g~~~~l~~~~~~~~~~~~~g~~~~vp~~~~~~~~~~l~~~~~k-~~~~~f~~~~~~~~~~~~~~~~ 158 (445)
....+ +.+++.+.. .++.. .....+++.+|+++++|.+.. + ..++..++ +.+..++.. ....+
T Consensus 68 ~~~~~~~~~l~~~~~-~~~~~--~~~~~~~~~~g~~~~~P~~~~--~--~~l~~~~~~~~~~~ll~~----~~~~~---- 132 (484)
T 4dsg_A 68 FSHYQYFDDVMDWAV-QGWNV--LQRESWVWVRGRWVPYPFQNN--I--HRLPEQDRKRCLDELVRS----HARTY---- 132 (484)
T ss_dssp CCSBHHHHHHHHHHC-SCEEE--EECCCEEEETTEEEESSGGGC--G--GGSCHHHHHHHHHHHHHH----HHCCC----
T ss_pred ccChHHHHHHHHHHh-hhhhh--ccCceEEEECCEEEEeCccch--h--hhCCHHHHHHHHHHHHHH----HhccC----
Confidence 76554 444554443 32222 223456778999999984311 1 11222111 112222222 11111
Q ss_pred cccCCCCCHHHHHHHcCCChhHHH-HHHHH-hhcccc--C--------CCCCCcHHHHHHHHHHHHHHhh--hccCCCce
Q 036458 159 GLDLNKVTAREIISKYGLEDDTID-FIGHA-LALHIN--D--------SYLEEPAMDFVKRIKLYAESLA--RFQGGSPY 224 (445)
Q Consensus 159 ~~~~~~~s~~~~~~~~~l~~~~~~-~i~~~-~~l~~~--~--------~~~~~~~~~~l~~i~~~~~s~~--~~~g~s~~ 224 (445)
.....++.+|+.+. +.+.+.+ ++... -.++.. + ..+..+.... -++..+.... .+.....|
T Consensus 133 --~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~--~~~~~~~~~~~~~~~~~~~f 207 (484)
T 4dsg_A 133 --TEPPNNFEESFTRQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLER--IRRNIQENRDDLGWGPNATF 207 (484)
T ss_dssp --SSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHH--HHHHHHHTCCCCCCSTTSEE
T ss_pred --CCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHH--HHHHHhhcccccCCCccceE
Confidence 12457899988643 2222211 11110 011110 0 0111111111 1111111110 01013347
Q ss_pred EEeC-CCcchHHHHHHHHHHHcCcEEEeC--CcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCC-------------
Q 036458 225 IYPL-YGLGELPQAFARLSAVYGGTYMLN--KPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYL------------- 288 (445)
Q Consensus 225 ~~p~-gG~~~L~q~l~r~~~~~Gg~i~l~--~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~------------- 288 (445)
.||. ||++.|++++++.+.. .+++++ ++|++|..+ ++++ ...+|+++.||+||++.+..
T Consensus 208 ~yp~~gG~~~l~~~la~~l~~--~~i~~~~~~~V~~I~~~-~~~v--~~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~ 282 (484)
T 4dsg_A 208 RFPQRGGTGIIYQAIKEKLPS--EKLTFNSGFQAIAIDAD-AKTI--TFSNGEVVSYDYLISTVPFDNLLRMTKGTGFKG 282 (484)
T ss_dssp EEESSSCTHHHHHHHHHHSCG--GGEEECGGGCEEEEETT-TTEE--EETTSCEEECSEEEECSCHHHHHHHEECSSCTT
T ss_pred EeecCCCHHHHHHHHHhhhhh--CeEEECCCceeEEEEec-CCEE--EECCCCEEECCEEEECCCHHHHHHHhhccCCCC
Confidence 8887 7999999999876533 279999 569999873 5543 23578899999999986531
Q ss_pred Ccccc----cc--ceEEEEEEeeccCCCCCCCCCceEEEeCCCcCCCCCCEEEEEec-CCccccCCCcEEEEEEeeeCC-
Q 036458 289 PDKVQ----KV--GKVARAICIMNHPIPDTNDSHSCQVILPQKQLGRKSDMYLFCCS-YAHNVAPNGQYIAFVSTEAET- 360 (445)
Q Consensus 289 p~~~~----~~--~~~~r~i~i~~~~i~~~~~~~~~~i~~p~~~~~~~~~i~v~~~s-~~~~~aP~G~~~~~vst~~~~- 360 (445)
|...+ .. ..+....+.++.+... .-...+++++|..+. +...+..++ .++..+|+|+.++++......
T Consensus 283 ~~~~~~~l~~l~y~s~~~v~l~~~~~~~~-~~~~~~~i~vp~~~~---~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~~~ 358 (484)
T 4dsg_A 283 YDEWPAIADKMVYSSTNVIGIGVKGTPPP-HLKTACWLYFPEDTS---PFYRATVFSNYSKYNVPEGHWSLMLEVSESKY 358 (484)
T ss_dssp GGGHHHHHHHCCEEEEEEEEEEEESCCCG-GGTTCCEEECCSTTC---SCSEEECGGGTCGGGSCTTEEEEEEEEEEBTT
T ss_pred CHHHHHHHhCCCcCceEEEEEEEcCCCcc-cCCCCeEEEEEcCCC---eEEEEEeecCCCcccCCCCeEEEEEEEecCcC
Confidence 11110 11 1222233345555321 002356778886542 112344444 567889999998877765431
Q ss_pred --CCcccccHhHHhhc---CCc------ccceee----eeeccccC--------CC-CCCCcEEEccC---CCCCC-ccH
Q 036458 361 --DNPEVELKPGIDLL---GPV------DEIFFD----TYDRFVPT--------NN-HEADHCFISTS---YDATT-HFE 412 (445)
Q Consensus 361 --~~~~~~l~~~~~~l---~~~------~~~~~~----~~~~~~~~--------~~-~~~~~~~~~~~---~d~~~-~~~ 412 (445)
.+.++.++.+++-| +-+ ...++. -...|.+- .. ....||++++- +-... .-|
T Consensus 359 ~~~~d~~l~~~a~~~L~~~~~~~~~~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~~~~l~~~Gr~g~~~y~v~~~d 438 (484)
T 4dsg_A 359 KPVNHSTLIEDCIVGCLASNLLLPEDLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELMSRCIYSRGRFGAWRYEVGNQD 438 (484)
T ss_dssp BCCCTTSHHHHHHHHHHHTTSCCTTCCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTEEECSTTTTCCGGGCSHH
T ss_pred CcCCHHHHHHHHHHHHHHcCCCCccceEEEEEEEEeCccccCCCccHHHHHHHHHHHHHhCCcEeecCCcccccCCCChH
Confidence 23344555565522 111 111121 11122211 00 01128999875 44432 468
Q ss_pred hHHHHHHHHHHHhc
Q 036458 413 STVQDVLEMYTKIT 426 (445)
Q Consensus 413 ~~~~~~~~~~~~~~ 426 (445)
.|+..++.+.++|.
T Consensus 439 ~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 439 HSFMQGVEAIDHVL 452 (484)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999998
No 18
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.81 E-value=2e-19 Score=182.15 Aligned_cols=247 Identities=16% Similarity=0.177 Sum_probs=146.2
Q ss_pred CCcccEEEECCChhHHHHHHHhhhCC-CeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEeccccee
Q 036458 2 DEDYDVIVLGTGLKECILSGVLSVDG-LKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFM 80 (445)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l 80 (445)
.+++||+|||||++||+||++|+++| ++|+|+|+++++||++.|++. .++.+|+|++++
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~--------------------~G~~~d~G~~~~ 63 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNY--------------------HGRRYEMGAIMG 63 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEE--------------------TTEECCSSCCCB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCC--------------------CCcccccCceee
Confidence 46799999999999999999999999 999999999999999999887 469999999998
Q ss_pred ecC-chhHHHhhhccccCceeeEEecceEEEeCCeEEEccCChHHHhhccccCchhHHHHHHHHHHHHh-hhccCcc-cc
Q 036458 81 MAN-GGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQE-YEEDDPK-SH 157 (445)
Q Consensus 81 ~~~-~~l~~~l~~~g~~~~l~~~~~~~~~~~~~g~~~~vp~~~~~~~~~~l~~~~~k~~~~~f~~~~~~-~~~~~~~-~~ 157 (445)
... ..+.+++.++|+.- ........+.+.+|+.+ +|.... .... .+ ...+.++...+.. +...... .+
T Consensus 64 ~~~~~~~~~l~~~~g~~~--~~~~~~~~~~~~~g~~~-~~~~~~--~~~~--~~--~~~~~~l~~~~~~~~~~~~~~~~~ 134 (424)
T 2b9w_A 64 VPSYDTIQEIMDRTGDKV--DGPKLRREFLHEDGEIY-VPEKDP--VRGP--QV--MAAVQKLGQLLATKYQGYDANGHY 134 (424)
T ss_dssp CTTCHHHHHHHHHHCCCC--CSCCCCEEEECTTSCEE-CGGGCT--THHH--HH--HHHHHHHHHHHHTTTTTTTSSSSS
T ss_pred cCCcHHHHHHHHHhCCcc--ccccccceeEcCCCCEe-ccccCc--ccch--hH--HHHHHHHHHHHhhhhhhcccccch
Confidence 754 45666777777642 11112223445566654 332100 0000 00 0112233222221 1100000 00
Q ss_pred c-cccCCCCCHHHHHHHcCCChhHHHHHHHHhhccccCCCCCCcHHHHHHHHHHHHHHhhhccCCCceEEeCCCcchHHH
Q 036458 158 E-GLDLNKVTAREIISKYGLEDDTIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQ 236 (445)
Q Consensus 158 ~-~~~~~~~s~~~~~~~~~l~~~~~~~i~~~~~l~~~~~~~~~~~~~~l~~i~~~~~s~~~~~g~s~~~~p~gG~~~L~q 236 (445)
. .......|+.+|+++.+.+.....++...+..... +..+.|+...+..+... . +..+ ...+.+++.+|++++++
T Consensus 135 ~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~-~-~~~~-~~~~~~~~~~g~~~l~~ 210 (424)
T 2b9w_A 135 NKVHEDLMLPFDEFLALNGCEAARDLWINPFTAFGYG-HFDNVPAAYVLKYLDFV-T-MMSF-AKGDLWTWADGTQAMFE 210 (424)
T ss_dssp SCCCGGGGSBHHHHHHHTTCGGGHHHHTTTTCCCCCC-CTTTSBHHHHHHHSCHH-H-HHHH-HHTCCBCCTTCHHHHHH
T ss_pred hhhhhhhccCHHHHHHhhCcHHHHHHHHHHHHhhccC-ChHhcCHHHHHHhhhHh-h-hhcc-cCCceEEeCChHHHHHH
Confidence 0 00123479999999887765332222111111111 12234655544322111 0 0011 11123467899999999
Q ss_pred HHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCC
Q 036458 237 AFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPS 286 (445)
Q Consensus 237 ~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~ 286 (445)
++.+. .+.++++|++|++|..+ ++++. |++++.++.||.||++.+
T Consensus 211 ~l~~~---l~~~v~~~~~V~~i~~~-~~~v~-v~~~~g~~~ad~Vv~a~~ 255 (424)
T 2b9w_A 211 HLNAT---LEHPAERNVDITRITRE-DGKVH-IHTTDWDRESDVLVLTVP 255 (424)
T ss_dssp HHHHH---SSSCCBCSCCEEEEECC-TTCEE-EEESSCEEEESEEEECSC
T ss_pred HHHHh---hcceEEcCCEEEEEEEE-CCEEE-EEECCCeEEcCEEEECCC
Confidence 88653 46789999999999874 55555 655444589999999865
No 19
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.78 E-value=1.4e-18 Score=176.15 Aligned_cols=248 Identities=14% Similarity=0.117 Sum_probs=144.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccceeecC-
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFMMAN- 83 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l~~~- 83 (445)
|||||||||++||+||+.|+++|++|+|||+++++||++.+.+..- ..++.+|+|++++...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~c-----------------ipg~~~~~g~~~~~~~~ 64 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRN-----------------VPGLRVEIGGAYLHRKH 64 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSS-----------------STTCEEESSCCCBCTTT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccC-----------------CCCceEecCCeeeCCCC
Confidence 7999999999999999999999999999999999999999877620 0268999999998653
Q ss_pred -chhHHHhhhccccCceeeEEecceEE--EeCCeEEEc-cCChHHHhhccccCchhHHHHHHHHHHHHhhhccCcccccc
Q 036458 84 -GGLVRILIHTDVTKYLNFKAVDGSFV--YNKGKIYKV-PATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEG 159 (445)
Q Consensus 84 -~~l~~~l~~~g~~~~l~~~~~~~~~~--~~~g~~~~v-p~~~~~~~~~~l~~~~~k~~~~~f~~~~~~~~~~~~~~~~~ 159 (445)
..+.+.+.+.|+.... .......+ +.+++.... |.. .+. .... +..+.++......+....+.....
T Consensus 65 ~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~-~~~~~~l~~~~~~~~~~~~~~~~~ 135 (431)
T 3k7m_X 65 HPRLAAELDRYGIPTAA--ASEFTSFRHRLGPTAVDQAFPIP-GSE-----AVAV-EAATYTLLRDAHRIDLEKGLENQD 135 (431)
T ss_dssp CHHHHHHHHHHTCCEEE--CCCCCEECCBSCTTCCSSSSCCC-GGG-----HHHH-HHHHHHHHHHHTTCCTTTCTTSSS
T ss_pred cHHHHHHHHHhCCeeee--cCCCCcEEEEecCCeecCCCCCC-HHH-----HHHH-HHHHHHHHHHHHhcCCCCCccCcc
Confidence 4566777777764211 11111111 122221111 111 000 0001 112333333333322111111011
Q ss_pred -ccCCCCCHHHHHHHcCCChhHHHHHHHHhhccccCCCCCCcHHHHHHHHHHHHHHhhh-ccCCCceEEeCCCcchHHHH
Q 036458 160 -LDLNKVTAREIISKYGLEDDTIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLAR-FQGGSPYIYPLYGLGELPQA 237 (445)
Q Consensus 160 -~~~~~~s~~~~~~~~~l~~~~~~~i~~~~~l~~~~~~~~~~~~~~l~~i~~~~~s~~~-~~g~s~~~~p~gG~~~L~q~ 237 (445)
...+ .++.++++..+.++....++...+.........+.++.+.+..+...-..+.. +.+. .. .+.+|++.++++
T Consensus 136 ~~~~d-~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~g~~~l~~~ 212 (431)
T 3k7m_X 136 LEDLD-IPLNEYVDKLDLPPVSRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSL-DE-VFSNGSADLVDA 212 (431)
T ss_dssp CGGGC-SBHHHHHHHHTCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTC-CE-EETTCTHHHHHH
T ss_pred hhhhc-CCHHHHHHhcCCCHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecch-hh-hcCCcHHHHHHH
Confidence 1223 78999999888888776654333221111111123444444332211000000 1022 22 779999888886
Q ss_pred HHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCC
Q 036458 238 FARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPS 286 (445)
Q Consensus 238 l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~ 286 (445)
+. +..| +|++|++|++|..+ ++.+...+.+|++++||+||++.+
T Consensus 213 ~~---~~~g-~i~~~~~V~~i~~~-~~~v~v~~~~g~~~~ad~vi~a~~ 256 (431)
T 3k7m_X 213 MS---QEIP-EIRLQTVVTGIDQS-GDVVNVTVKDGHAFQAHSVIVATP 256 (431)
T ss_dssp HH---TTCS-CEESSCCEEEEECS-SSSEEEEETTSCCEEEEEEEECSC
T ss_pred HH---hhCC-ceEeCCEEEEEEEc-CCeEEEEECCCCEEEeCEEEEecC
Confidence 65 3456 99999999999874 455543334677899999999876
No 20
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.76 E-value=5.7e-18 Score=176.03 Aligned_cols=233 Identities=13% Similarity=0.143 Sum_probs=130.6
Q ss_pred cccEEEECCChhHHHHHHHhhhCC-CeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccceeec
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDG-LKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFMMA 82 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l~~ 82 (445)
.+||||||||++||+||..|+++| ++|+|||+++++||++.|.+.. .++.+|+|++++..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~-------------------~G~~~D~G~~~~~~ 68 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGY-------------------QGRKYDIGASWHHD 68 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECG-------------------GGCEEESSCCEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecC-------------------CCcEEecCCeEEec
Confidence 589999999999999999999999 9999999999999999998752 35899999999874
Q ss_pred --CchhHHHhhhccccCceeeEEecceEEEeCCeEEEccCChHHHhhccccCchhHHHHHHHHHHHHhhhc-cCcccccc
Q 036458 83 --NGGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEE-DDPKSHEG 159 (445)
Q Consensus 83 --~~~l~~~l~~~g~~~~l~~~~~~~~~~~~~g~~~~vp~~~~~~~~~~l~~~~~k~~~~~f~~~~~~~~~-~~~~~~~~ 159 (445)
..++++++.++++... ...+++.+++...++.+. ..+...... .+.+++..+..+.. .... .
T Consensus 69 ~~~~~~~~~~~~lg~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~---~ 133 (516)
T 1rsg_A 69 TLTNPLFLEEAQLSLNDG------RTRFVFDDDNFIYIDEER-GRVDHDKEL-----LLEIVDNEMSKFAELEFHQ---H 133 (516)
T ss_dssp TTTCHHHHHHHHHHHHHC------CCCEECCCCCCEEEETTT-EECTTCTTT-----CHHHHHHHHHHHHHHHC------
T ss_pred CCCChHHHHHHHhCCCCc------ceeEEECCCCEEEEcCCC-ccccccHHH-----HHHHHHHHHHHHHHHHhhh---c
Confidence 3467777767665211 011233334333333321 000000000 11112211111110 0000 0
Q ss_pred ccCCCCCHHHHHHHc------CCChhHHHHHHHHhh---ccccCCCCCCcHHHHHHHHHHHHHHhhhccCCCceEEeCCC
Q 036458 160 LDLNKVTAREIISKY------GLEDDTIDFIGHALA---LHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYG 230 (445)
Q Consensus 160 ~~~~~~s~~~~~~~~------~l~~~~~~~i~~~~~---l~~~~~~~~~~~~~~l~~i~~~~~s~~~~~g~s~~~~p~gG 230 (445)
....+.|+.+++.++ .+.+....++...+. .+........++... +... .+ ...++++
T Consensus 134 ~~~~d~s~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~----------~~~~-~~-~~~~~~g- 200 (516)
T 1rsg_A 134 LGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLCRYLELWHGLDWKLLSAKDT----------YFGH-QG-RNAFALN- 200 (516)
T ss_dssp ----CCBHHHHHHHHHHHHGGGSCHHHHHHHHHHHGGGHHHHTBCTTTSBHHHH----------CCCC-SS-CCEEESC-
T ss_pred cCCCCCCHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHhCCChHHCChHHH----------Hhhc-cC-cchhhhC-
Confidence 012347888876542 233332222222111 111111111122111 1111 12 2246777
Q ss_pred cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEE-eCCeEEEcCEEEECCC
Q 036458 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVT-SEGETAKCKKVVCDPS 286 (445)
Q Consensus 231 ~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~-~~g~~~~ad~VI~~~~ 286 (445)
++.|+++|++.+. +++|++|++|++|..++++. +.|+ .+|++++||+||++.+
T Consensus 201 ~~~l~~~l~~~l~--~~~i~~~~~V~~I~~~~~~~-v~v~~~~g~~~~ad~VI~t~p 254 (516)
T 1rsg_A 201 YDSVVQRIAQSFP--QNWLKLSCEVKSITREPSKN-VTVNCEDGTVYNADYVIITVP 254 (516)
T ss_dssp HHHHHHHHHTTSC--GGGEETTCCEEEEEECTTSC-EEEEETTSCEEEEEEEEECCC
T ss_pred HHHHHHHHHHhCC--CCEEEECCEEEEEEEcCCCe-EEEEECCCcEEECCEEEECCC
Confidence 8888888876442 36899999999999842333 4455 4778899999999864
No 21
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.75 E-value=5.9e-17 Score=167.43 Aligned_cols=245 Identities=18% Similarity=0.201 Sum_probs=144.9
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccceeec
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFMMA 82 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l~~ 82 (445)
..+||+|||||++||+||..|+++|++|+|+|+++++||++.+++... .++.+|+|++++..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~------------------~~~~~~~g~~~~~~ 93 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEE------------------AGWYANLGPMRLPE 93 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETT------------------TTEEEESSCCCEET
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCC------------------CCchhhcCcccccc
Confidence 468999999999999999999999999999999999999999887421 46999999999876
Q ss_pred Cch-hHHHhhhccccCceeeEEe-cceEEEeCCeEEEccC---ChHHHhhccccCchhH---------HHHHHHHHHHHh
Q 036458 83 NGG-LVRILIHTDVTKYLNFKAV-DGSFVYNKGKIYKVPA---TDVEALKSPLMGLFEK---------RRARKFFIYVQE 148 (445)
Q Consensus 83 ~~~-l~~~l~~~g~~~~l~~~~~-~~~~~~~~g~~~~vp~---~~~~~~~~~l~~~~~k---------~~~~~f~~~~~~ 148 (445)
... +.+++.+.|+... .+... ...+++.+|.....+. + ...+...+ ...++ ..+.++...+..
T Consensus 94 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (498)
T 2iid_A 94 KHRIVREYIRKFDLRLN-EFSQENDNAWYFIKNIRKKVGEVKKD-PGLLKYPV-KPSEAGKSAGQLYEESLGKVVEELKR 170 (498)
T ss_dssp TCHHHHHHHHHTTCCEE-EECSCCTTSEEEETTEEEEHHHHHHC-GGGGCCCC-CGGGTTCCHHHHHHHHTHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCce-eecccCCccEEEeCCeeecccccccC-ccccccCC-CccccCCCHHHHHHHHHHHHHHHHhh
Confidence 544 4556666776421 22211 2234445565443321 1 01111110 00000 011122222211
Q ss_pred hhccCccccccccCCCCCHHHHHHHcC-CChhHHHHHHHHhhccccCCCCCCcHHHHHHHHHHHHHHhhhccCCCceEEe
Q 036458 149 YEEDDPKSHEGLDLNKVTAREIISKYG-LEDDTIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYP 227 (445)
Q Consensus 149 ~~~~~~~~~~~~~~~~~s~~~~~~~~~-l~~~~~~~i~~~~~l~~~~~~~~~~~~~~l~~i~~~~~s~~~~~g~s~~~~p 227 (445)
... ..... .++..++.+|+++.+ +++..++.+...+.... .+ .....+.+.... .+.....++++
T Consensus 171 ~~~--~~~~~--~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~-------~~~~~~~~~~~ 236 (498)
T 2iid_A 171 TNC--SYILN--KYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDS--GY-YVSFIESLKHDD-------IFAYEKRFDEI 236 (498)
T ss_dssp SCH--HHHHH--HHTTSBHHHHHHHTSCCCHHHHHHHHHHTTCGG--GT-TSBHHHHHHHHH-------HHTTCCCEEEE
T ss_pred ccH--HHHHH--HhhhhhHHHHHHHccCCCHHHHHHHHHhcCccc--ch-hHHHHHHHHHHh-------ccccCcceEEe
Confidence 100 00001 124578999998766 66766655543321111 11 112222221110 11123456789
Q ss_pred CCCcchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCe----EEEcCEEEECCC
Q 036458 228 LYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGE----TAKCKKVVCDPS 286 (445)
Q Consensus 228 ~gG~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~----~~~ad~VI~~~~ 286 (445)
.+|++.|+++|++.+. .+|++|++|++|..+ ++++.....+|+ +++||+||++.+
T Consensus 237 ~gG~~~l~~~l~~~l~---~~i~~~~~V~~I~~~-~~~v~v~~~~~~~~~~~~~ad~vI~t~p 295 (498)
T 2iid_A 237 VDGMDKLPTAMYRDIQ---DKVHFNAQVIKIQQN-DQKVTVVYETLSKETPSVTADYVIVCTT 295 (498)
T ss_dssp TTCTTHHHHHHHHHTG---GGEESSCEEEEEEEC-SSCEEEEEECSSSCCCEEEESEEEECSC
T ss_pred CCcHHHHHHHHHHhcc---cccccCCEEEEEEEC-CCeEEEEEecCCcccceEEeCEEEECCC
Confidence 9999999999987654 379999999999984 555433334443 589999999865
No 22
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.75 E-value=2.8e-17 Score=163.04 Aligned_cols=239 Identities=11% Similarity=0.170 Sum_probs=141.9
Q ss_pred CCcccEEEECCChhHHHHHHHhhhCCCeEEEEecC-CCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEeccccee
Q 036458 2 DEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRN-AYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFM 80 (445)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n-~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l 80 (445)
...+||+|||||++||+||+.|+++|++|+|+|++ +++||++.|++... ..+..+ ...++.+|+|++++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~---------~~~~~~-~~~~~~~e~G~~~~ 111 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKK---------GEPSPF-ADPAQYAEAGAMRL 111 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCT---------TSCCSS-SSTTCCEESSCCCE
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccc---------cccccc-cCCCcEEecCceee
Confidence 34689999999999999999999999999999999 99999999887421 000000 01468999999998
Q ss_pred ecCc-hhHHHhhhccccCceeeEEe-----------------------------------------cceEEEeCCeEEEc
Q 036458 81 MANG-GLVRILIHTDVTKYLNFKAV-----------------------------------------DGSFVYNKGKIYKV 118 (445)
Q Consensus 81 ~~~~-~l~~~l~~~g~~~~l~~~~~-----------------------------------------~~~~~~~~g~~~~v 118 (445)
.... .+.+++.+.|+.....+..- ...+++.+|+....
T Consensus 112 ~~~~~~~~~~~~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~q~~r~~~~~~~~~~~g~~~~~ 191 (376)
T 2e1m_A 112 PSFHPLTLALIDKLGLKRRLFFNVDIDPQTGNQDAPVPPVFYKSFKDGKTWTNGAPSPEFKEPDKRNHTWIRTNREQVRR 191 (376)
T ss_dssp ETTCHHHHHHHHHTTCCEEEECSSCCCTTSSBCSSCCCCCEEECSSTTCEEESSCCCTTCBCCCCCCCSEEEETTEEEEH
T ss_pred cchHHHHHHHHHHcCCCcceeeccccccccccccccccccceeeeccceeEeccCCcccccccccCCCceEEECCceecc
Confidence 7543 45567777887654322110 12234455554432
Q ss_pred c---CChHHHhh--ccc------cCchh--HHHHHHHHHHHHhhhcc-------Cc---ccccc--ccCCCCCHHHHHH-
Q 036458 119 P---ATDVEALK--SPL------MGLFE--KRRARKFFIYVQEYEED-------DP---KSHEG--LDLNKVTAREIIS- 172 (445)
Q Consensus 119 p---~~~~~~~~--~~l------~~~~~--k~~~~~f~~~~~~~~~~-------~~---~~~~~--~~~~~~s~~~~~~- 172 (445)
. .+ ...+. ..+ ..+.+ .+.+.+|+..+...... .+ ..+.. ..+++.|+.+|++
T Consensus 192 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~S~~~~L~~ 270 (376)
T 2e1m_A 192 AQYATD-PSSINEGFHLTGCETRLTVSDMVNQALEPVRDYYSVKQDDGTRVNKPFKEWLAGWADVVRDFDGYSMGRFLRE 270 (376)
T ss_dssp HHHHHC-THHHHHHTTCCGGGGGSCHHHHHHHHHHHHHHHHEEEETTTEEEECCHHHHHHHHHHHHHHHTTCBHHHHHHH
T ss_pred cccccC-HHHhccccCCchhhcccCHHHHHHHHHHHHHHhhhhccccccccccccchhhccchHHHHHHhCCCHHHHHhh
Confidence 1 01 01111 000 01101 12333344332210000 00 00111 1246799999998
Q ss_pred HcCCChhHHHHHHHHhhccccCCCCCCcHHHHHHHHHHHHHHhhhccCCCceEEeCCCcchHHHHHHHHHHHcCcEEEeC
Q 036458 173 KYGLEDDTIDFIGHALALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLN 252 (445)
Q Consensus 173 ~~~l~~~~~~~i~~~~~l~~~~~~~~~~~~~~l~~i~~~~~s~~~~~g~s~~~~p~gG~~~L~q~l~r~~~~~Gg~i~l~ 252 (445)
..++++..++++....... .....++.+.+.. ...+.+...++.+.||++.|+++|++.+ +..+++|
T Consensus 271 ~~g~s~~~~~~~~~~~~~~---~~~~~s~l~~l~~-------~~~~~~~~~~~~i~GG~~~l~~~l~~~l---~~~i~l~ 337 (376)
T 2e1m_A 271 YAEFSDEAVEAIGTIENMT---SRLHLAFFHSFLG-------RSDIDPRATYWEIEGGSRMLPETLAKDL---RDQIVMG 337 (376)
T ss_dssp TSCCCHHHHHHHHHHTTCT---TTTTSBHHHHHHH-------CSCSCTTCCEEEETTCTTHHHHHHHHHG---GGTEECS
T ss_pred ccCCCHHHHHHHHhhcCcc---ccchhhHHHHHHH-------hhhhccCCceEEECCcHHHHHHHHHHhc---CCcEEec
Confidence 7899999888764433211 1113344444321 1112134557788999999999998754 5789999
Q ss_pred CcceeEEEcCCC
Q 036458 253 KPECKVEFDGDG 264 (445)
Q Consensus 253 ~~V~~I~~~~~g 264 (445)
++|++|..+++|
T Consensus 338 ~~V~~I~~~~~g 349 (376)
T 2e1m_A 338 QRMVRLEYYDPG 349 (376)
T ss_dssp EEEEEEEECCCC
T ss_pred CeEEEEEECCCc
Confidence 999999986454
No 23
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.74 E-value=2e-17 Score=170.50 Aligned_cols=265 Identities=15% Similarity=0.100 Sum_probs=139.4
Q ss_pred CCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccceee
Q 036458 2 DEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFMM 81 (445)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l~ 81 (445)
.+.+||+|||||++||+||+.|+++|++|+|+|+++++||++.+.+....+.... ..........++.+|.|++++.
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~ 85 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLS---GETQKCTFSEGHFYNVGATRIP 85 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTT---SCEEECCCCTTCEEESSCCCEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCccccccc---chhhhhcccCCCcCCcchhhcc
Confidence 4578999999999999999999999999999999999999998887531100000 0000011125688999999887
Q ss_pred cCchhHHHhhhccccCceeeEEe-cceEEE-eC-----CeEEEccCChHHHhhccccCchhHHHHHHHHHHHHhhhccCc
Q 036458 82 ANGGLVRILIHTDVTKYLNFKAV-DGSFVY-NK-----GKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDP 154 (445)
Q Consensus 82 ~~~~l~~~l~~~g~~~~l~~~~~-~~~~~~-~~-----g~~~~vp~~~~~~~~~~l~~~~~k~~~~~f~~~~~~~~~~~~ 154 (445)
....+.+++.+.|+... .+... ...+++ .+ |+...+|....+ +. . .+..++..........
T Consensus 86 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~----~-----~~~~l~~~~~~~~~~~- 153 (489)
T 2jae_A 86 QSHITLDYCRELGVEIQ-GFGNQNANTFVNYQSDTSLSGQSVTYRAAKAD-TF----G-----YMSELLKKATDQGALD- 153 (489)
T ss_dssp TTSTHHHHHHHHTCCEE-EECCCCTTSEEECCCSSTTTTCCEEHHHHHHH-HH----H-----HHHHHHHHHHHHTTTT-
T ss_pred cHHHHHHHHHHcCCceE-EccccCCCceEEecCCcccCCccccHHHHhhh-hh----c-----cHHHHHHHHHhccccc-
Confidence 65578888888887421 12111 223454 44 555554422111 10 0 0111111111100000
Q ss_pred cccccccCCCCCHHHHHHHcCCChhHHHHHHHHhhccc----cCCCCCC---c-HHHHHHH--HHHHHHHhhhccCCCce
Q 036458 155 KSHEGLDLNKVTAREIISKYGLEDDTIDFIGHALALHI----NDSYLEE---P-AMDFVKR--IKLYAESLARFQGGSPY 224 (445)
Q Consensus 155 ~~~~~~~~~~~s~~~~~~~~~l~~~~~~~i~~~~~l~~----~~~~~~~---~-~~~~l~~--i~~~~~s~~~~~g~s~~ 224 (445)
.... ..+..++.+|+++++-......+-......+. ....+.. + ..+.+.. +..++.....+.....+
T Consensus 154 ~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (489)
T 2jae_A 154 QVLS--REDKDALSEFLSDFGDLSDDGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRSGIGRNFSFDFGYDQAMMM 231 (489)
T ss_dssp TTSC--HHHHHHHHHHHHHHTTCCTTSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHHTTTTTGGGGGCTTTSSSE
T ss_pred cccc--hhhHHHHHHHHHHhhhhhhccccccccchhhccCCCcccccCCCCCCcCHHHHhhhhHHHHHhhhhccccCccE
Confidence 0000 00123566666543210000000000000000 0000000 0 1111100 00011111011123457
Q ss_pred EEeCCCcchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCC---eEEEcCEEEECCC
Q 036458 225 IYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEG---ETAKCKKVVCDPS 286 (445)
Q Consensus 225 ~~p~gG~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g---~~~~ad~VI~~~~ 286 (445)
+++++|++.|+++|++.+.. ++|++|++|++|..+ ++++.....+| ++++||+||++.+
T Consensus 232 ~~~~gG~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~-~~~v~v~~~~g~~~~~~~ad~vI~a~p 293 (489)
T 2jae_A 232 FTPVGGMDRIYYAFQDRIGT--DNIVFGAEVTSMKNV-SEGVTVEYTAGGSKKSITADYAICTIP 293 (489)
T ss_dssp EEETTCTTHHHHHHHHHHCG--GGEETTCEEEEEEEE-TTEEEEEEEETTEEEEEEESEEEECSC
T ss_pred EeecCCHHHHHHHHHHhcCC--CeEEECCEEEEEEEc-CCeEEEEEecCCeEEEEECCEEEECCC
Confidence 78999999999999875531 789999999999985 55555333455 6899999999865
No 24
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.73 E-value=2.3e-18 Score=173.23 Aligned_cols=353 Identities=13% Similarity=0.163 Sum_probs=191.6
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhC-CCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEe-cccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVD-GLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVD-MIPK 78 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~-G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iD-lgp~ 78 (445)
|.+++||+|||||++||+||+.|+++ |++|+|+|+++++||++.|.+... .++.+| .|++
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~------------------~g~~~~~~G~~ 65 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQ------------------TGIEVHKYGAH 65 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTT------------------TCCEEETTSCC
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccC------------------CCEEEEeCCCc
Confidence 55679999999999999999999999 999999999999999999987621 358885 9999
Q ss_pred eeecC-chhHHHhhhccccCceeeEEecceEEEeCCeEEEccCChHHHhhccccCch-hHHHHHHHHHHHHhhhccCccc
Q 036458 79 FMMAN-GGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLF-EKRRARKFFIYVQEYEEDDPKS 156 (445)
Q Consensus 79 ~l~~~-~~l~~~l~~~g~~~~l~~~~~~~~~~~~~g~~~~vp~~~~~~~~~~l~~~~-~k~~~~~f~~~~~~~~~~~~~~ 156 (445)
++... ..+.+++.+.|+... + ....+++.+|+.+++|.+. ..+. .+.... ....+.+++..... .. .
T Consensus 66 ~~~~~~~~~~~~~~~~g~~~~--~--~~~~~~~~~G~~~~~p~~~-~~~~-~l~~~~~~~~~~~~~l~~~~~--~~-~-- 134 (399)
T 1v0j_A 66 LFHTSNKRVWDYVRQFTDFTD--Y--RHRVFAMHNGQAYQFPMGL-GLVS-QFFGKYFTPEQARQLIAEQAA--EI-D-- 134 (399)
T ss_dssp CEEESCHHHHHHHTTTCCBCC--C--CCCEEEEETTEEEEESSSH-HHHH-HHHTSCCCHHHHHHHHHHHGG--GS-C--
T ss_pred EEcCCcHHHHHHHHHhhhhhc--c--ccceEEEECCEEEeCCCCH-HHHH-HHhcccCCHHHHHHHHHHHhh--cc-C--
Confidence 98754 467777777776221 1 1234567799999999873 2221 111111 11223322222211 10 0
Q ss_pred cccccCCCCCHHHHHHHcCCChhHHH-HHHHH-hhccccCCCCCCcHHHHHHHHHHHHHHhhhccCCCceE-EeCCCcch
Q 036458 157 HEGLDLNKVTAREIISKYGLEDDTID-FIGHA-LALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYI-YPLYGLGE 233 (445)
Q Consensus 157 ~~~~~~~~~s~~~~~~~~~l~~~~~~-~i~~~-~~l~~~~~~~~~~~~~~l~~i~~~~~s~~~~~g~s~~~-~p~gG~~~ 233 (445)
.....|+.+|+.+. +.+...+ ++... ...+..+. .+.++..+ .++......-..+ +...+. +|++|+++
T Consensus 135 ----~~~~~s~~e~l~~~-~g~~~~~~~~~~~~~~~~~~~~-~~ls~~~~-~~~~~~~~~~~~~-~~~~~~~~p~gG~~~ 206 (399)
T 1v0j_A 135 ----TADAQNLEEKAISL-IGRPLYEAFVKGYTAKQWQTDP-KELPAANI-TRLPVRYTFDNRY-FSDTYEGLPTDGYTA 206 (399)
T ss_dssp ----TTC----CCHHHHH-HCHHHHHHHTHHHHHHHHTSCG-GGSCGGGC-SCCCCCSSSCCCS-CCCSEEECBTTHHHH
T ss_pred ----CCCcccHHHHHHHH-HhHHHHHHHHHHHHHhhcCCCh-hhcChHhh-hcceeEeccccch-hhhhhcccccccHHH
Confidence 11347888888753 4444433 33222 12222111 01122111 0000000000111 222453 99999999
Q ss_pred HHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEE-EcCEEEECCCCC--Cc-cccccc--eEEEEEEeecc
Q 036458 234 LPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETA-KCKKVVCDPSYL--PD-KVQKVG--KVARAICIMNH 307 (445)
Q Consensus 234 L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~-~ad~VI~~~~~~--p~-~~~~~~--~~~r~i~i~~~ 307 (445)
|+++|++ ..|++|++|++|++|..+ | + ++ .||+||++.+.- .. ....+. .+....+.++.
T Consensus 207 l~~~l~~---~~g~~I~l~~~V~~I~~~-------v--~--~~~~aD~VI~t~p~~~l~~~~l~~l~y~s~~~~~~~~~~ 272 (399)
T 1v0j_A 207 WLQNMAA---DHRIEVRLNTDWFDVRGQ-------L--R--PGSPAAPVVYTGPLDRYFDYAEGRLGWRTLDFEVEVLPI 272 (399)
T ss_dssp HHHHHTC---STTEEEECSCCHHHHHHH-------H--T--TTSTTCCEEECSCHHHHTTTTTCCCCEEEEEEEEEEESS
T ss_pred HHHHHHh---cCCeEEEECCchhhhhhh-------h--h--hcccCCEEEECCcHHHHHhhhhCCCCcceEEEEEEEEcc
Confidence 9998875 568999999999998541 1 1 34 699999986521 11 011111 11112223344
Q ss_pred CCCCCCCCCceEEEeCCCcCCCCCCEEEEEec-CCcccc-CCCcEEEEEEeeeCCCCcccccHhHHhhcCCcccceee--
Q 036458 308 PIPDTNDSHSCQVILPQKQLGRKSDMYLFCCS-YAHNVA-PNGQYIAFVSTEAETDNPEVELKPGIDLLGPVDEIFFD-- 383 (445)
Q Consensus 308 ~i~~~~~~~~~~i~~p~~~~~~~~~i~v~~~s-~~~~~a-P~G~~~~~vst~~~~~~~~~~l~~~~~~l~~~~~~~~~-- 383 (445)
+. .. ...++.+|..... ... +..++ ..+..+ |+++.++......+- ++ . ....|-.
T Consensus 273 ~~--~~--~~~~~~~~~~~~~-~~r--i~~~~~~~~~~~~~~~~~~v~~e~~~~~-~~--------~----~~~~ypv~~ 332 (399)
T 1v0j_A 273 GD--FQ--GTAVMNYNDLDVP-YTR--IHEFRHFHPERDYPTDKTVIMREYSRFA-ED--------D----DEPYYPINT 332 (399)
T ss_dssp SC--SS--SSSEEEECCTTSS-CSE--EEEGGGGCTTSCCCSSCEEEEEEEEEEC-CT--------T----SCCCEECCC
T ss_pred cc--CC--CCeEEEeCCCCCC-cce--eEeecCCCCCCcCCCCCeEEEEeecccc-cC--------C----CccccccCc
Confidence 32 11 2235667753321 122 33333 345555 678887777654310 10 0 0111110
Q ss_pred --eee---ccccCCCCCC---CcEEEcc---CCCCCCccHhHHHHHHHHHHHhc
Q 036458 384 --TYD---RFVPTNNHEA---DHCFIST---SYDATTHFESTVQDVLEMYTKIT 426 (445)
Q Consensus 384 --~~~---~~~~~~~~~~---~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~ 426 (445)
... .|.... ... .|+++++ +|.. ...|+|+..++++.+++.
T Consensus 333 ~~~~~~~~~~~~~~-~~~~~~~~v~~~G~~~~~~~-~~~e~~i~sa~~~a~~l~ 384 (399)
T 1v0j_A 333 EADRALLATYRARA-KSETASSKVLFGGRLGTYQY-LDMHMAIASALNMYDNVL 384 (399)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHCEEECHHHHHTCC-CCHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHH-HhccccCCEEEccceEEEEe-cCHHHHHHHHHHHHHHHh
Confidence 001 111111 012 5899987 4655 356999999999999885
No 25
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.72 E-value=1.3e-17 Score=166.79 Aligned_cols=227 Identities=13% Similarity=0.170 Sum_probs=139.8
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEE-ecccce
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNV-DMIPKF 79 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i-Dlgp~~ 79 (445)
|+ ++||+|||+|++||++|..|+++|++|+|+|+++++||++.+..... .++.+ |.|+++
T Consensus 1 m~-~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~------------------~g~~~~~~G~~~ 61 (384)
T 2bi7_A 1 MK-SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSE------------------TNVMVHVYGPHI 61 (384)
T ss_dssp -C-CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTT------------------TCCEEETTSCCC
T ss_pred CC-cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccC------------------CCceEeeCCceE
Confidence 55 48999999999999999999999999999999999999999987632 46776 999999
Q ss_pred eecC-chhHHHhhhccccCceeeEEe-cceEEEeCCeEEEccCChHHHhhccccCch-hHHHHHHHHHHHHhhhccCccc
Q 036458 80 MMAN-GGLVRILIHTDVTKYLNFKAV-DGSFVYNKGKIYKVPATDVEALKSPLMGLF-EKRRARKFFIYVQEYEEDDPKS 156 (445)
Q Consensus 80 l~~~-~~l~~~l~~~g~~~~l~~~~~-~~~~~~~~g~~~~vp~~~~~~~~~~l~~~~-~k~~~~~f~~~~~~~~~~~~~~ 156 (445)
+... .++.+++.+.+. +... ...+++.+|+.+.+|.+. ..+.. +.... ....+.+++. .....
T Consensus 62 ~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~g~~~~~P~~~-~~~~~-l~~~~~~~~~~~~~l~---~~~~~---- 127 (384)
T 2bi7_A 62 FHTDNETVWNYVNKHAE-----MMPYVNRVKATVNGQVFSLPINL-HTINQ-FFSKTCSPDEARALIA---EKGDS---- 127 (384)
T ss_dssp EEESCHHHHHHHHTTSC-----EEECCCCEEEEETTEEEEESCCH-HHHHH-HTTCCCCHHHHHHHHH---HHSCC----
T ss_pred ECCCCHHHHHHHHHHhh-----hcccccceEEEECCEEEECCCCh-hHHHH-HhcccCCHHHHHHHHH---Hhhhc----
Confidence 9854 466677766664 2222 234566789999999883 33322 11111 1222333332 22111
Q ss_pred cccccCCCCCHHHHHHHcCCChhHHH-HHHHH-hhccccCCCCCCcHHHHHHHHHHHHHHhhhccCCCceE-EeCCCcch
Q 036458 157 HEGLDLNKVTAREIISKYGLEDDTID-FIGHA-LALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYI-YPLYGLGE 233 (445)
Q Consensus 157 ~~~~~~~~~s~~~~~~~~~l~~~~~~-~i~~~-~~l~~~~~~~~~~~~~~l~~i~~~~~s~~~~~g~s~~~-~p~gG~~~ 233 (445)
. .....|+.+|+.+. +.+.+.+ ++... .+.+..+. .+.++... .++.........| ....|. +|++|+++
T Consensus 128 -~--~~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~~~~~~-~~ls~~~~-~r~~~~~~~~~~~-~~~~~~~~p~gG~~~ 200 (384)
T 2bi7_A 128 -T--IADPQTFEEEALRF-IGKELYEAFFKGYTIKQWGMQP-SELPASIL-KRLPVRFNYDDNY-FNHKFQGMPKCGYTQ 200 (384)
T ss_dssp -S--CSSCCBHHHHHHHH-HCHHHHHHHTHHHHHHHHSSCG-GGSBGGGC-CSCCCCSSSCCCS-CCCSEEEEETTHHHH
T ss_pred -c--CCCCcCHHHHHHHh-hcHHHHHHHHHHHHHHHhCCCH-HHhCHHHH-hcccccccccccc-ccccccEEECcCHHH
Confidence 0 12457999998765 4455443 33221 22332111 01111110 0000000000112 223454 99999999
Q ss_pred HHHHHHHHHHHcCcEEEeCCcce-eEEEcCCCcEEEEEeCCeEEEcCEEEECCC
Q 036458 234 LPQAFARLSAVYGGTYMLNKPEC-KVEFDGDGKVIGVTSEGETAKCKKVVCDPS 286 (445)
Q Consensus 234 L~q~l~r~~~~~Gg~i~l~~~V~-~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~ 286 (445)
|++++++ ..|++|++|++|+ +|.. .+|+||++.+
T Consensus 201 l~~~l~~---~~g~~I~l~~~V~~~i~~----------------~~d~VI~a~p 235 (384)
T 2bi7_A 201 MIKSILN---HENIKVDLQREFIVEERT----------------HYDHVFYSGP 235 (384)
T ss_dssp HHHHHHC---STTEEEEESCCCCGGGGG----------------GSSEEEECSC
T ss_pred HHHHHHh---cCCCEEEECCeeehhhhc----------------cCCEEEEcCC
Confidence 9998875 4688999999999 8842 1899999865
No 26
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.71 E-value=1.3e-17 Score=166.64 Aligned_cols=346 Identities=15% Similarity=0.193 Sum_probs=192.3
Q ss_pred CCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEE-eccccee
Q 036458 2 DEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNV-DMIPKFM 80 (445)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i-Dlgp~~l 80 (445)
...+||+|||||++||++|+.|+++|++|+|+|+++++||++.+.... .++.+ |.|++++
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~-------------------~G~~~~~~G~~~~ 87 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDD-------------------AGVLIHPYGPHIF 87 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECT-------------------TSCEECTTSCCCC
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeecc-------------------CCceEeecCCccc
Confidence 356899999999999999999999999999999999999999987631 46776 9999998
Q ss_pred ecC-chhHHHhhhccccCceeeEE-ecceEEEeCCeEEEccCChHHHhhccccCc-hhHHHHHHHHHHHHhhhccCcccc
Q 036458 81 MAN-GGLVRILIHTDVTKYLNFKA-VDGSFVYNKGKIYKVPATDVEALKSPLMGL-FEKRRARKFFIYVQEYEEDDPKSH 157 (445)
Q Consensus 81 ~~~-~~l~~~l~~~g~~~~l~~~~-~~~~~~~~~g~~~~vp~~~~~~~~~~l~~~-~~k~~~~~f~~~~~~~~~~~~~~~ 157 (445)
... ..+.+++.+.+. +.. ....+++.+|+++++|.+. ..+. .+.++ ...+....++. . ...+
T Consensus 88 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~l~~lP~~~-~~~~-~l~~~~~~~~~~~~~l~---~--~~~~--- 152 (397)
T 3hdq_A 88 HTNSKDVFEYLSRFTE-----WRPYQHRVLASVDGQLLPIPINL-DTVN-RLYGLNLTSFQVEEFFA---S--VAEK--- 152 (397)
T ss_dssp EESCHHHHHHHHTSCC-----EEECCCBEEEEETTEEEEESCCH-HHHH-HHHTCCCCHHHHHHHHH---H--HCCC---
T ss_pred CCChHHHHHHHHHhhh-----cccccccceEEECCEEEEcCCCh-HHHH-HhhccCCCHHHHHHHHh---h--cccC---
Confidence 854 466677766663 222 2344577899999999883 3221 12111 11123333332 1 1111
Q ss_pred ccccCCCCCHHHHHHHcCCChhHHH-HHHHH-hhccccCCCCCCcHHHHHHHHHHHHHHhhhccCCCce-EEeCCCcchH
Q 036458 158 EGLDLNKVTAREIISKYGLEDDTID-FIGHA-LALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPY-IYPLYGLGEL 234 (445)
Q Consensus 158 ~~~~~~~~s~~~~~~~~~l~~~~~~-~i~~~-~~l~~~~~~~~~~~~~~l~~i~~~~~s~~~~~g~s~~-~~p~gG~~~L 234 (445)
..+..|+.+|+.+. +.+.+.+ ++... ...+..+. -+-++. .+.|+......-..| -...| .+|++|.+.|
T Consensus 153 ---~~~~~s~~e~~~~~-~G~~~~e~~~~py~~k~~~~~~-~~Lsa~-~~~Rvp~~~~~d~~y-f~~~~qg~P~gGy~~l 225 (397)
T 3hdq_A 153 ---VEQVRTSEDVVVSK-VGRDLYNKFFRGYTRKQWGLDP-SELDAS-VTARVPTRTNRDNRY-FADTYQAMPLHGYTRM 225 (397)
T ss_dssp ---CSSCCBHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCG-GGSBTT-TGGGSCCCSSCCCBS-CCCSEEEEETTCHHHH
T ss_pred ---CCCCcCHHHHHHHh-cCHHHHHHHHHHHhCchhCCCH-HHHHHH-HHHhcCcccccCccc-hhhhheeccCCCHHHH
Confidence 12457999988643 3343333 33222 23333211 011221 122221100000111 12345 3799999999
Q ss_pred HHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCC---CCccccccc-eEEEEE-EeeccCC
Q 036458 235 PQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSY---LPDKVQKVG-KVARAI-CIMNHPI 309 (445)
Q Consensus 235 ~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~---~p~~~~~~~-~~~r~i-~i~~~~i 309 (445)
.++|+ +..|++|+||++|.++ +.++.+|.||++.+. +.-....+. +-.+.+ ..++.+
T Consensus 226 ~e~l~---~~~g~~V~l~~~v~~~--------------~~~~~~d~vI~T~P~d~~~~~~~g~L~yrsl~~~~~~~~~~- 287 (397)
T 3hdq_A 226 FQNML---SSPNIKVMLNTDYREI--------------ADFIPFQHMIYTGPVDAFFDFCYGKLPYRSLEFRHETHDTE- 287 (397)
T ss_dssp HHHHT---CSTTEEEEESCCGGGT--------------TTTSCEEEEEECSCHHHHTTTTTCCCCEEEEEEEEEEESSS-
T ss_pred HHHHH---hccCCEEEECCeEEec--------------cccccCCEEEEcCCHHHHHHHhcCCCCCceEEEEEEEeccc-
Confidence 88775 4569999999999854 122457899998642 100011111 111222 223432
Q ss_pred CCCCCCCceEEEeCCCcCCCCCCE-EEEEecCCccccCCCcEEEEEEeeeCCCCcccccHhHHhhcCCccc-ceeeeeec
Q 036458 310 PDTNDSHSCQVILPQKQLGRKSDM-YLFCCSYAHNVAPNGQYIAFVSTEAETDNPEVELKPGIDLLGPVDE-IFFDTYDR 387 (445)
Q Consensus 310 ~~~~~~~~~~i~~p~~~~~~~~~i-~v~~~s~~~~~aP~G~~~~~vst~~~~~~~~~~l~~~~~~l~~~~~-~~~~~~~~ 387 (445)
+. ...+++.+|... +. -|..++.=+.. |.+++++....+.++++|- -||.. .-......
T Consensus 288 -~~--~~~~~vn~~d~~-----p~tRi~e~k~~~~~-~~~~t~i~~Ey~~~~~~py----------Ypv~~~~~~~~~~~ 348 (397)
T 3hdq_A 288 -QL--LPTGTVNYPNDY-----AYTRVSEFKHITGQ-RHHQTSVVYEYPRAEGDPY----------YPVPRPENAELYKK 348 (397)
T ss_dssp -CS--CSSSEEECSSSS-----SCSEEEEHHHHHCC-CCSSEEEEEEEEESSSSCC----------EECCSHHHHHHHHH
T ss_pred -cC--CCCeEEEeCCCC-----cceEEEeecccCCC-CCCCEEEEEEECCCCCccc----------cccCchhHHHHHHH
Confidence 11 235677888432 22 24555421233 5578888777766443331 11110 00000011
Q ss_pred cccCCCCCCCcEEEcc---CCCCCCccHhHHHHHHHHHHHhcC
Q 036458 388 FVPTNNHEADHCFIST---SYDATTHFESTVQDVLEMYTKITG 427 (445)
Q Consensus 388 ~~~~~~~~~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~~ 427 (445)
|.... ...+||++.+ .|-. .+.|.++.+++++++++..
T Consensus 349 y~~~a-~~~~~v~~~GRlg~y~Y-~~md~~i~~al~~~~~~~~ 389 (397)
T 3hdq_A 349 YEALA-DAAQDVTFVGRLATYRY-YNMDQVVAQALATFRRLQG 389 (397)
T ss_dssp HHHHH-HHCTTEEECSTTTTTCC-CCHHHHHHHHHHHHHHHHC
T ss_pred HHHHH-hcCCCEEEcccceEEEe-ccHHHHHHHHHHHHHHHhc
Confidence 22110 0136888864 4444 4669999999999999864
No 27
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.69 E-value=1.3e-16 Score=163.99 Aligned_cols=241 Identities=14% Similarity=0.162 Sum_probs=133.2
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCC-eEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccce
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKF 79 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~ 79 (445)
|...+||+|||+|++||++|..|+++|+ +|+|+|+++++||++.+.+. .++.+|+|+++
T Consensus 1 ~~~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~--------------------~~~~~d~g~~~ 60 (472)
T 1b37_A 1 ATVGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNF--------------------AGINVELGANW 60 (472)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEE--------------------TTEEEESSCCE
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeeccc--------------------CCcEEeeCCeE
Confidence 4567999999999999999999999998 89999999999999999887 46999999999
Q ss_pred eec-----CchhHHHhhh-ccccCcee-eEEecceEEE-eCCeEEEccCChHHHhhccccCchhHHHHHHHHHHHHhhhc
Q 036458 80 MMA-----NGGLVRILIH-TDVTKYLN-FKAVDGSFVY-NKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEE 151 (445)
Q Consensus 80 l~~-----~~~l~~~l~~-~g~~~~l~-~~~~~~~~~~-~~g~~~~vp~~~~~~~~~~l~~~~~k~~~~~f~~~~~~~~~ 151 (445)
+.. ..++.+++.+ +|+..... +.. ...+++ .+|+.++.+ .+. ..+.+.. .+.+|...+..
T Consensus 61 ~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~-~~~~~~~~~g~~~~~~-----~~~-~~~~~~~--~~~~~~~~~~~--- 128 (472)
T 1b37_A 61 VEGVNGGKMNPIWPIVNSTLKLRNFRSDFDY-LAQNVYKEDGGVYDED-----YVQ-KRIELAD--SVEEMGEKLSA--- 128 (472)
T ss_dssp EEEESSSSCCTHHHHHHTTSCCCEEECCCTT-GGGCEECSSSSBCCHH-----HHH-HHHHHHH--HHHHHHHHHHH---
T ss_pred EeccCCCCCCHHHHHHHhhcCCceeeccCcc-ccceeEcCCCCCCCHH-----HHH-HHHHHHH--HHHHHHHHHHH---
Confidence 972 2367778877 77753211 100 111233 255543221 110 0111111 12222221111
Q ss_pred cCccccccccCCCCCHHH--HHHHcC---CChhHHHHHHHHh-hc-cccCCCCCCcHHHHHHHHHHHHHHhhhccCCC-c
Q 036458 152 DDPKSHEGLDLNKVTARE--IISKYG---LEDDTIDFIGHAL-AL-HINDSYLEEPAMDFVKRIKLYAESLARFQGGS-P 223 (445)
Q Consensus 152 ~~~~~~~~~~~~~~s~~~--~~~~~~---l~~~~~~~i~~~~-~l-~~~~~~~~~~~~~~l~~i~~~~~s~~~~~g~s-~ 223 (445)
..+. ...++.++.+ ++.+.. .......++.... .+ +.... ...+....+. ... +..+ +.. -
T Consensus 129 ~~~~----~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~-~~~----~~~~-~~~~~ 197 (472)
T 1b37_A 129 TLHA----SGRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPP-RVTSLQNTVP-LAT----FSDF-GDDVY 197 (472)
T ss_dssp TSCT----TCTTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCG-GGBBSTTTSS-CHH----HHHH-CSEEE
T ss_pred hhcc----ccchhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccc-cccchhhccc-ccc----cccc-CCcee
Confidence 1110 1123355543 333221 1111111121111 00 01000 0000000000 000 1112 222 2
Q ss_pred eEEeCCCcchHHHHHHHHHHHc--------CcEEEeCCcceeEEEcCCCcEEEEE-eCCeEEEcCEEEECCC
Q 036458 224 YIYPLYGLGELPQAFARLSAVY--------GGTYMLNKPECKVEFDGDGKVIGVT-SEGETAKCKKVVCDPS 286 (445)
Q Consensus 224 ~~~p~gG~~~L~q~l~r~~~~~--------Gg~i~l~~~V~~I~~~~~g~~~~v~-~~g~~~~ad~VI~~~~ 286 (445)
+.++.+|++.|++++++.+... |++|+++++|++|..+ ++++. |+ .+|++++||+||++.+
T Consensus 198 ~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~-~~~v~-v~~~~g~~~~ad~vI~a~~ 267 (472)
T 1b37_A 198 FVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS-PGGVT-VKTEDNSVYSADYVMVSAS 267 (472)
T ss_dssp EECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC-SSCEE-EEETTSCEEEESEEEECSC
T ss_pred eeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEc-CCcEE-EEECCCCEEEcCEEEEecC
Confidence 3345899999999998876544 6799999999999984 55555 54 4778999999999865
No 28
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.66 E-value=9.6e-17 Score=159.56 Aligned_cols=227 Identities=16% Similarity=0.193 Sum_probs=137.7
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEe-cccceeec
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVD-MIPKFMMA 82 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iD-lgp~~l~~ 82 (445)
++||+|||+|++||++|..|+++|++|+|+|+++++||++.+... .++.+| .||+++..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~--------------------~g~~~~~~G~~~~~~ 60 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDC--------------------EGIQIHKYGAHIFHT 60 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEE--------------------TTEEEETTSCCCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeecc--------------------CCceeeccCCceecC
Confidence 479999999999999999999999999999999999999999876 458896 99999886
Q ss_pred C-chhHHHhhhccccCceeeEEecceEEEeCCeEEEccCChHHHhhccccCchhHHHHHHHHHHHHhhhccCcccccccc
Q 036458 83 N-GGLVRILIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQEYEEDDPKSHEGLD 161 (445)
Q Consensus 83 ~-~~l~~~l~~~g~~~~l~~~~~~~~~~~~~g~~~~vp~~~~~~~~~~l~~~~~k~~~~~f~~~~~~~~~~~~~~~~~~~ 161 (445)
. ..+.+++.+.+... .+. ...+++.+|+.+.+|.+. ..+.. ++.......+.+|+..... .. . .
T Consensus 61 ~~~~~~~~~~~l~~~~--~~~--~~~~~~~~g~~~~~p~~~-~~~~~-l~~~~~~~~~~~~l~~~~~---~~----~--~ 125 (367)
T 1i8t_A 61 NDKYIWDYVNDLVEFN--RFT--NSPLAIYKDKLFNLPFNM-NTFHQ-MWGVKDPQEAQNIINAQKK---KY----G--D 125 (367)
T ss_dssp SCHHHHHHHHTTSCBC--CCC--CCCEEEETTEEEESSBSH-HHHHH-HHCCCCHHHHHHHHHHHTT---TT----C--C
T ss_pred CCHHHHHHHHHhhhhh--hcc--ccceEEECCeEEEcCCCH-HHHHH-HhccCCHHHHHHHHHHHhh---cc----C--C
Confidence 4 35566665555421 111 223456689999999873 33322 1111112233444433221 11 1 1
Q ss_pred CCCCCHHHHHHHcCCChhHHH-HHHHH-hhccccCCCCCCcHHHHHHHHHHHHHHhhhccCCCceE-EeCCCcchHHHHH
Q 036458 162 LNKVTAREIISKYGLEDDTID-FIGHA-LALHINDSYLEEPAMDFVKRIKLYAESLARFQGGSPYI-YPLYGLGELPQAF 238 (445)
Q Consensus 162 ~~~~s~~~~~~~~~l~~~~~~-~i~~~-~~l~~~~~~~~~~~~~~l~~i~~~~~s~~~~~g~s~~~-~p~gG~~~L~q~l 238 (445)
....|+.+|+.+. +.+.+.+ ++... .+.+..+. .+.|+... .++......-..| ....|. +|++|+++|+++|
T Consensus 126 ~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~~~~~-~~lsa~~~-~~l~~~~~~~~~~-~~~~~~~~p~gG~~~l~~~l 201 (367)
T 1i8t_A 126 KVPENLEEQAISL-VGEDLYQALIKGYTEKQWGRSA-KELPAFII-KRIPVRFTFDNNY-FSDRYQGIPVGGYTKLIEKM 201 (367)
T ss_dssp CCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCG-GGSCTTSS-CCCCBCSSSCCCS-CCCSEEECBTTCHHHHHHHH
T ss_pred CCCccHHHHHHHH-HhHHHHHHHHHHHHhhhhCCCh-HHcCHHHH-hhceeeecccccc-ccchhhcccCCCHHHHHHHH
Confidence 1457899988765 4444443 33222 22222111 01121110 0100000000011 123354 9999999999988
Q ss_pred HHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCC
Q 036458 239 ARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPS 286 (445)
Q Consensus 239 ~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~ 286 (445)
++ |++|++|++|.+|.. + + .+.+|+||++.+
T Consensus 202 ~~-----g~~i~l~~~V~~i~~----~---v-----~~~~D~VV~a~p 232 (367)
T 1i8t_A 202 LE-----GVDVKLGIDFLKDKD----S---L-----ASKAHRIIYTGP 232 (367)
T ss_dssp HT-----TSEEECSCCGGGSHH----H---H-----HTTEEEEEECSC
T ss_pred hc-----CCEEEeCCceeeech----h---h-----hccCCEEEEecc
Confidence 75 689999999999852 1 1 145899999865
No 29
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.45 E-value=1.9e-12 Score=139.81 Aligned_cols=74 Identities=18% Similarity=0.187 Sum_probs=63.3
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccceeec-
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFMMA- 82 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l~~- 82 (445)
.+||+|||+|++||++|..|+++|++|+|+|+++++||++.|.+.. .++.+|+|++++..
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~-------------------~G~~vd~Ga~~i~G~ 396 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSF-------------------KGVTVGRGAQIVNGC 396 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCS-------------------TTCCEESSCCEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeecccc-------------------CCeEeccCCeEEeCC
Confidence 5899999999999999999999999999999999999999987642 46899999999864
Q ss_pred -CchhHHHhhhcccc
Q 036458 83 -NGGLVRILIHTDVT 96 (445)
Q Consensus 83 -~~~l~~~l~~~g~~ 96 (445)
..++..++.+.|+.
T Consensus 397 ~~np~~~l~~~lGl~ 411 (776)
T 4gut_A 397 INNPVALMCEQLGIS 411 (776)
T ss_dssp TTCHHHHHHHHHTCC
T ss_pred ccChHHHHHHHhCCc
Confidence 34566667777764
No 30
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.45 E-value=1.1e-13 Score=146.86 Aligned_cols=80 Identities=10% Similarity=0.019 Sum_probs=64.0
Q ss_pred cccEEEECCChhHHHHHHHhhhCC--------CeEEEEecCC-CC----------------CCcccccchhhhhhhhcCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDG--------LKVLHMDRNA-YY----------------GGESTSLNLTQLWKRFKGD 58 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G--------~~VlvlE~n~-~~----------------GG~~~s~~~~~~~~~~~~~ 58 (445)
.++|+|||||++||+||+.|+++| ++|+|+|+++ ++ ||++.+....+..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~~~~~~g~~~~~~~g~~GGr~~t~~~~~~~------ 129 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSFLHDRPGIKAIKVRGLKAGRVSAALVHNGD------ 129 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBGGGCC----CEECTTCEETTEEEEEECSSC------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCcccccccchhhHHHhcCcCCceEEEEEccCCc------
Confidence 478999999999999999999999 9999999999 99 9999998762100
Q ss_pred CCCCCccCCCCCeEEecccceeecC-chhHHHhhhc-ccc
Q 036458 59 DKPPERLGSSKEYNVDMIPKFMMAN-GGLVRILIHT-DVT 96 (445)
Q Consensus 59 ~~~~~~~~~~~~~~iDlgp~~l~~~-~~l~~~l~~~-g~~ 96 (445)
....++.+|+|++++... ..+++++.+. |+.
T Consensus 130 -------~~~~~~~~e~G~~~~~~~~~~~~~~~~~l~gl~ 162 (721)
T 3ayj_A 130 -------PASGDTIYEVGAMRFPEIAGLTWHYASAAFGDA 162 (721)
T ss_dssp -------GGGCSEEEECSCCCEETTCHHHHHHHHHHHCTT
T ss_pred -------ccCCCcEEecCCEEecCccHHHHHHHHHhcCCc
Confidence 001468999999998754 3556777777 775
No 31
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.43 E-value=2.8e-12 Score=136.89 Aligned_cols=73 Identities=16% Similarity=0.291 Sum_probs=61.4
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccceeec
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFMMA 82 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l~~ 82 (445)
..+||+|||+|++||++|..|+++|++|+|+|+++++||++.+++. .++.+|+|++++..
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~--------------------~~~~~~~G~~~~~~ 165 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRK--------------------GNYVADLGAMVVTG 165 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEEE--------------------TTEEEESSCCEECC
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccc--------------------cCchhhcCcEEEeC
Confidence 3589999999999999999999999999999999999999999886 46999999999864
Q ss_pred C-c-hhHHHhhhccc
Q 036458 83 N-G-GLVRILIHTDV 95 (445)
Q Consensus 83 ~-~-~l~~~l~~~g~ 95 (445)
. + .+..+..++++
T Consensus 166 ~~~~~~~~l~~~l~~ 180 (662)
T 2z3y_A 166 LGGNPMAVVSKQVNM 180 (662)
T ss_dssp SBTCHHHHHHHHHTC
T ss_pred CCCchHHHHHHHhCc
Confidence 2 3 44444445664
No 32
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.42 E-value=1.6e-12 Score=141.32 Aligned_cols=73 Identities=16% Similarity=0.291 Sum_probs=61.5
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccceeec
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFMMA 82 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l~~ 82 (445)
..+||+|||+|++||+||+.|+++|++|+|||+++++||++.+++. .++.+|+|++++..
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~--------------------~~~~~~~G~~~~~~ 336 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRK--------------------GNYVADLGAMVVTG 336 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEEE--------------------TTEEEESSCCEECC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceeeecc--------------------cccchhcCceEecC
Confidence 3579999999999999999999999999999999999999999886 46999999999875
Q ss_pred C-c-hhHHHhhhccc
Q 036458 83 N-G-GLVRILIHTDV 95 (445)
Q Consensus 83 ~-~-~l~~~l~~~g~ 95 (445)
. + .+..+..++++
T Consensus 337 ~~~~~~~~l~~~lg~ 351 (852)
T 2xag_A 337 LGGNPMAVVSKQVNM 351 (852)
T ss_dssp SBTCHHHHHHHHTTC
T ss_pred CCCchHHHHHHHhCC
Confidence 2 2 44444445664
No 33
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.35 E-value=5.5e-12 Score=124.13 Aligned_cols=47 Identities=30% Similarity=0.440 Sum_probs=40.9
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN 47 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~ 47 (445)
|.+++||||||+|++|+++|+.|+++|++|+|+||++.+|+..+..+
T Consensus 1 M~~~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~~~ 47 (369)
T 3dme_A 1 MSTDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRN 47 (369)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTSSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCcCC
Confidence 77789999999999999999999999999999999998887665543
No 34
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.32 E-value=1.7e-11 Score=120.18 Aligned_cols=44 Identities=20% Similarity=0.331 Sum_probs=41.5
Q ss_pred ccEEEECCChhHHHHHHHhhh---CCCeEEEEecCCCCCCcccccch
Q 036458 5 YDVIVLGTGLKECILSGVLSV---DGLKVLHMDRNAYYGGESTSLNL 48 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~---~G~~VlvlE~n~~~GG~~~s~~~ 48 (445)
+||+|||||++||++|+.|++ +|++|+|+||++.+||++++.+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~ 48 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACS 48 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEEC
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeec
Confidence 699999999999999999999 99999999999999999987654
No 35
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.30 E-value=2.9e-12 Score=119.09 Aligned_cols=62 Identities=21% Similarity=0.314 Sum_probs=55.2
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccceeecC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFMMAN 83 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l~~~ 83 (445)
.+||+|||||++||+||..|+++|++|+||||++.+||++++.+. .++.+|+|.+++...
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~--------------------~~~~~d~g~~~~~~~ 61 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRS--------------------DAGALDMGAQYFTAR 61 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEE--------------------TTEEEECSCCCBCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccccccc--------------------CCceeecCccccccC
Confidence 389999999999999999999999999999999999999998777 358899998877655
Q ss_pred ch
Q 036458 84 GG 85 (445)
Q Consensus 84 ~~ 85 (445)
..
T Consensus 62 ~~ 63 (336)
T 3kkj_A 62 DR 63 (336)
T ss_dssp SH
T ss_pred cH
Confidence 43
No 36
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.28 E-value=2.6e-11 Score=122.81 Aligned_cols=65 Identities=15% Similarity=0.189 Sum_probs=52.9
Q ss_pred eEEeCC-C---cchHHHHHHHHHHHcCcEEEeCC---cceeEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCC
Q 036458 224 YIYPLY-G---LGELPQAFARLSAVYGGTYMLNK---PECKVEFDGDGKVIGVTS-EGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 224 ~~~p~g-G---~~~L~q~l~r~~~~~Gg~i~l~~---~V~~I~~~~~g~~~~v~~-~g~~~~ad~VI~~~~~~p 289 (445)
+++|.. | ...+.++|.+.++..|+++++++ +|++|..+ ++++++|.+ +|++++||.||.+.+.+.
T Consensus 149 ~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 149 YFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp EEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred EEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 345555 5 45788999999999999999999 99999984 777887875 677899999999877653
No 37
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.23 E-value=8e-11 Score=116.49 Aligned_cols=63 Identities=16% Similarity=0.116 Sum_probs=50.6
Q ss_pred EEeCCC---cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 225 IYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 225 ~~p~gG---~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
++|..| ...+.++|.+.++..|++++++++|++|..+ +++ ++|++++.+++||.||.+.+.+.
T Consensus 144 ~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~-~~V~t~~g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 144 YDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRV-DGA-WEVRCDAGSYRAAVLVNAAGAWC 209 (381)
T ss_dssp EETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEE-TTE-EEEECSSEEEEESEEEECCGGGH
T ss_pred EcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEe-CCe-EEEEeCCCEEEcCEEEECCChhH
Confidence 455555 3578899999999999999999999999984 554 56776555899999999987663
No 38
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.21 E-value=7.3e-11 Score=114.84 Aligned_cols=60 Identities=22% Similarity=0.329 Sum_probs=52.6
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccchhhhhhhhcCCCCCCCccCCCCCeEEecccceeecC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLNLTQLWKRFKGDDKPPERLGSSKEYNVDMIPKFMMAN 83 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iDlgp~~l~~~ 83 (445)
++||+|||||++||++|..|+++|.+|+|+||++.+||++++... .++.+|.+..++...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~--------------------~~~~~~~~~~~~~~~ 61 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRS--------------------DAGALDMGAQYFTAR 61 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEE--------------------TTEEEECSCCCBCCC
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEec--------------------CCCeEecCCCeEecC
Confidence 479999999999999999999999999999999999999988766 457888887766543
No 39
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.14 E-value=6.3e-10 Score=119.10 Aligned_cols=63 Identities=17% Similarity=0.065 Sum_probs=50.5
Q ss_pred eEEeCCC---cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCC
Q 036458 224 YIYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS-EGETAKCKKVVCDPSYL 288 (445)
Q Consensus 224 ~~~p~gG---~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~-~g~~~~ad~VI~~~~~~ 288 (445)
.++|.+| ...+.+++.+.++..|++++++++|++|..+ ++++ .|.+ +|+++.||.||.+.+.+
T Consensus 406 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~v-~V~t~~G~~i~Ad~VVlAtG~~ 472 (676)
T 3ps9_A 406 ITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRK-DDCW-LLNFAGDQQATHSVVVLANGHQ 472 (676)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCGGG
T ss_pred EEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEe-CCeE-EEEECCCCEEECCEEEECCCcc
Confidence 3466666 3578899999999999999999999999985 5554 5664 67889999999988765
No 40
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.14 E-value=4.6e-10 Score=111.33 Aligned_cols=64 Identities=20% Similarity=0.176 Sum_probs=51.1
Q ss_pred EEeCCC---cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 225 IYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 225 ~~p~gG---~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
++|..| ...+.+++.+.++..|++++++++|++|..+ ++++.+|++++.+++||.||.+.+.+.
T Consensus 139 ~~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 139 WNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKGIIKTGIVVNATNAWA 205 (382)
T ss_dssp EETTCCEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTEEEECSEEEECCGGGH
T ss_pred EcCCCeeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCcEEECCEEEECcchhH
Confidence 344444 3578888989888999999999999999984 677777776555899999999987663
No 41
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.12 E-value=1.5e-09 Score=116.41 Aligned_cols=64 Identities=17% Similarity=0.148 Sum_probs=49.5
Q ss_pred eEEeCCC---cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe-CCe-EEEcCEEEECCCCCC
Q 036458 224 YIYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS-EGE-TAKCKKVVCDPSYLP 289 (445)
Q Consensus 224 ~~~p~gG---~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~-~g~-~~~ad~VI~~~~~~p 289 (445)
.++|.+| ...+.+++.+.++..|++++++++|++|..+ ++++ .|.+ +|+ +++||.||.+.+.+.
T Consensus 401 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~v-~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 401 IHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRI-DSQW-QLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEC-SSSE-EEEEC-CCCCEEESEEEECCGGGT
T ss_pred EEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEe-CCeE-EEEeCCCcEEEECCEEEECCCcch
Confidence 3456666 3578899999999999999999999999985 5554 4554 666 899999999877653
No 42
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.12 E-value=8.4e-10 Score=111.19 Aligned_cols=63 Identities=13% Similarity=0.041 Sum_probs=50.1
Q ss_pred eEEeCCCcchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCC
Q 036458 224 YIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYL 288 (445)
Q Consensus 224 ~~~p~gG~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~ 288 (445)
..||.....++.+.+.+.++..|++++++++|++|..+ ++. +.|.+++.+++||.||.+.+.+
T Consensus 124 ~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~-~~~-~~V~~~~g~i~ad~VIlAtG~~ 186 (417)
T 3v76_A 124 QLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERT-ASG-FRVTTSAGTVDAASLVVASGGK 186 (417)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEE-TTE-EEEEETTEEEEESEEEECCCCS
T ss_pred EEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEe-CCE-EEEEECCcEEEeeEEEECCCCc
Confidence 35676667789999999999999999999999999874 443 4566555589999999987654
No 43
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.10 E-value=1.3e-09 Score=119.46 Aligned_cols=64 Identities=20% Similarity=0.219 Sum_probs=52.1
Q ss_pred EEeCCC---cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 225 IYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 225 ~~p~gG---~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
++|..| ...+.++|.+.++..|++++++++|++|..+ ++++++|.+++.+++||.||.+.+.+.
T Consensus 141 ~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 141 HVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTADGVIPADIVVSCAGFWG 207 (830)
T ss_dssp EETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTEEEECSEEEECCGGGH
T ss_pred EECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECCcEEECCEEEECCccch
Confidence 455555 2378899999999999999999999999884 667777877666899999999987663
No 44
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.10 E-value=2e-09 Score=107.38 Aligned_cols=65 Identities=25% Similarity=0.184 Sum_probs=51.8
Q ss_pred eEEeCCCcc---hHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 224 YIYPLYGLG---ELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 224 ~~~p~gG~~---~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
.++|..|.- .+.+++.+.++..|++++++++|++|..+ ++++++|.+++.+++||.||.+.+.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 163 TWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRGTIHAGKVALAGAGHS 230 (405)
T ss_dssp EEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTCCEEEEEEEECCGGGH
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCceEECCEEEECCchhH
Confidence 345666643 78888999898999999999999999984 667777776444799999999887653
No 45
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.02 E-value=6.2e-09 Score=107.67 Aligned_cols=57 Identities=16% Similarity=0.248 Sum_probs=47.3
Q ss_pred hHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe--CCe--EEEcC-EEEECCCCCC
Q 036458 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS--EGE--TAKCK-KVVCDPSYLP 289 (445)
Q Consensus 233 ~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~--~g~--~~~ad-~VI~~~~~~p 289 (445)
.+.+.|.+.++..|++++++++|++|..++++++++|.. +++ +++|+ .||.+.+-+.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 799999999999999999999999999854788988863 453 58995 8998876653
No 46
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.01 E-value=5e-09 Score=104.49 Aligned_cols=62 Identities=23% Similarity=0.161 Sum_probs=47.8
Q ss_pred EEeCCC---cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCC
Q 036458 225 IYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYL 288 (445)
Q Consensus 225 ~~p~gG---~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~ 288 (445)
+.|..| ...+.++|.+.++..|++++++++|++|..+ ++.+. |.+++.+++||.||.+.+.+
T Consensus 143 ~~~~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~v~-v~t~~g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 143 LQPDGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPD-ADGVS-VTTDRGTYRAGKVVLACGPY 207 (397)
T ss_dssp EETTCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTEEE-EEESSCEEEEEEEEECCGGG
T ss_pred EcCCCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEc-CCeEE-EEECCCEEEcCEEEEcCCcC
Confidence 445555 2467888988888899999999999999874 44443 55555689999999988766
No 47
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.97 E-value=3.2e-09 Score=111.03 Aligned_cols=65 Identities=25% Similarity=0.247 Sum_probs=51.0
Q ss_pred eEEeCCC--cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe----CC--eEEEcCEEEECCCCCC
Q 036458 224 YIYPLYG--LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS----EG--ETAKCKKVVCDPSYLP 289 (445)
Q Consensus 224 ~~~p~gG--~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~----~g--~~~~ad~VI~~~~~~p 289 (445)
+.|+.+- ...+..++.+.++..|++++++++|++|..+ ++++++|+. +| .+++||.||.+.+.+.
T Consensus 160 ~~~~dg~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 160 GIYVEYRTDDARLTLEIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred EEecCceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 3455332 3578899999999999999999999999984 777777763 23 4799999999988764
No 48
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.96 E-value=3.6e-09 Score=104.38 Aligned_cols=61 Identities=16% Similarity=0.176 Sum_probs=46.7
Q ss_pred EeCCC---cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCC
Q 036458 226 YPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYL 288 (445)
Q Consensus 226 ~p~gG---~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~ 288 (445)
.|..| ...+.+++.+.++..|++++.+++|++|..+ ++.+ .|.+++.+++||.||.+.+.+
T Consensus 140 ~~~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~-~v~~~~g~~~a~~vV~a~G~~ 203 (372)
T 2uzz_A 140 ETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHD-DDGV-TIETADGEYQAKKAIVCAGTW 203 (372)
T ss_dssp ESSCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSSE-EEEESSCEEEEEEEEECCGGG
T ss_pred eCCCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEc-CCEE-EEEECCCeEEcCEEEEcCCcc
Confidence 44544 3478888989888999999999999999884 4444 455544469999999987765
No 49
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.94 E-value=4.1e-09 Score=104.74 Aligned_cols=56 Identities=23% Similarity=0.325 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe----CCeEEEcCEEEECCCCCC
Q 036458 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS----EGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 233 ~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~----~g~~~~ad~VI~~~~~~p 289 (445)
.+.+.|.+.++..|++++++++|++|..+ ++++.+|+. ++.+++||.||.+.+...
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 34466667777789999999999999985 677776654 456899999999887654
No 50
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.94 E-value=1.2e-08 Score=102.10 Aligned_cols=64 Identities=14% Similarity=0.217 Sum_probs=48.6
Q ss_pred EEeCCCcchHHHHHHHHHHHcCcEEEeCCcceeEEEcC---CCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 225 IYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDG---DGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 225 ~~p~gG~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~---~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
.||.....++.+.+.+.++..|++++++++|++|..++ ++. +.|.+++.+++||.||.+.+..+
T Consensus 102 ~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 102 LFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNSTQWQCKNLIVATGGLS 168 (401)
T ss_dssp EEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTEEEEESEEEECCCCSS
T ss_pred EccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCCEEECCEEEECCCCcc
Confidence 45654456788888888888999999999999998741 344 45666555899999999876554
No 51
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.93 E-value=1.5e-08 Score=103.05 Aligned_cols=64 Identities=19% Similarity=0.259 Sum_probs=51.5
Q ss_pred EEeCCC-cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCC
Q 036458 225 IYPLYG-LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS-EGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 225 ~~p~gG-~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~-~g~~~~ad~VI~~~~~~p 289 (445)
.+|..+ ...+.++|.+.++..|++++++++|++|..+ ++++++|.+ +|++++||.||.+.+.++
T Consensus 126 ~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 126 MFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp EEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred EECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 466544 5678899999998899999999999999874 667677775 666799999999876553
No 52
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.92 E-value=5.4e-09 Score=103.46 Aligned_cols=64 Identities=13% Similarity=0.072 Sum_probs=50.5
Q ss_pred eEEeCCCc---chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 224 YIYPLYGL---GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 224 ~~~p~gG~---~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
.++|..|. .++.+++.+.++..|++++++++|++|..+ ++++ +|.++++++.||.||.+.+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 153 SFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSGDVWANHVVVASGVWS 219 (382)
T ss_dssp EEETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTEEEEEEEEEECCGGGT
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCceEEcCEEEECCChhH
Confidence 34566663 568899999999999999999999999874 5555 6666555899999999887654
No 53
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.90 E-value=9.2e-08 Score=100.24 Aligned_cols=58 Identities=16% Similarity=0.086 Sum_probs=47.5
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe---CCe--EEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS---EGE--TAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~---~g~--~~~ad~VI~~~~~~p 289 (445)
.++.+.|.+.++..|++++++++|++|..++++++++|.. +|+ ++.||.||.+.+.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 4788999999989999999999999999853378887752 575 689999999876653
No 54
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.87 E-value=8.1e-09 Score=102.39 Aligned_cols=56 Identities=9% Similarity=0.152 Sum_probs=45.7
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
..+.+++.+.++..|++++++++|++|..+ ++.+ .|.+++.+++||.||.+.+.+.
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~~-~v~~~~g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDIS-PDSV-KIETANGSYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSCE-EEEETTEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEec-CCeE-EEEeCCCEEEeCEEEEecCccH
Confidence 578889999999999999999999999884 4443 4566666899999999987663
No 55
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.87 E-value=1.3e-08 Score=102.15 Aligned_cols=40 Identities=23% Similarity=0.483 Sum_probs=34.5
Q ss_pred CCC-cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 1 MDE-DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 1 m~~-~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
|.+ ++||+|||||++||++|+.|+++|++|+|+|+++.++
T Consensus 1 M~~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~ 41 (421)
T 3nix_A 1 MQREKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR 41 (421)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC
T ss_pred CCCccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 544 4999999999999999999999999999999997553
No 56
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.87 E-value=8.2e-08 Score=100.53 Aligned_cols=63 Identities=21% Similarity=0.161 Sum_probs=50.0
Q ss_pred EeCCC---cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCC-CcEEEEEe---CCe--EEEcCEEEECCCCCC
Q 036458 226 YPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDGD-GKVIGVTS---EGE--TAKCKKVVCDPSYLP 289 (445)
Q Consensus 226 ~p~gG---~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~-g~~~~v~~---~g~--~~~ad~VI~~~~~~p 289 (445)
+|..| ..++.+.|.+.++..|++++++++|++|..+ + +++++|.. +|+ ++.||.||.+.+.+.
T Consensus 241 ~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~-~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 241 RPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVN-DDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp ECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEEC-TTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred ecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEC-CCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 45544 3468899999999999999999999999985 5 88887763 565 689999999876553
No 57
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.86 E-value=1.7e-08 Score=102.29 Aligned_cols=64 Identities=13% Similarity=0.172 Sum_probs=49.1
Q ss_pred EEeCCC---cchHHHHHHHHHHHcCcEEEeCCcceeEEEc--------------CCCcEEEEEeCCeEE--EcCEEEECC
Q 036458 225 IYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFD--------------GDGKVIGVTSEGETA--KCKKVVCDP 285 (445)
Q Consensus 225 ~~p~gG---~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~--------------~~g~~~~v~~~g~~~--~ad~VI~~~ 285 (445)
++|..| ...+.++|.+.++..|++++.+++|++|..+ +++++++|.+++.++ .||.||.+.
T Consensus 171 ~~~~~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g~i~~~Ad~VV~At 250 (448)
T 3axb_A 171 LIRSAGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDGTRVEVGEKLVVAA 250 (448)
T ss_dssp EESSEEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTSCEEEEEEEEEECC
T ss_pred EeCCCeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCCEEeecCCEEEECC
Confidence 344444 3478899999999999999999999999871 245566777644478 999999998
Q ss_pred CCC
Q 036458 286 SYL 288 (445)
Q Consensus 286 ~~~ 288 (445)
+.+
T Consensus 251 G~~ 253 (448)
T 3axb_A 251 GVW 253 (448)
T ss_dssp GGG
T ss_pred CcC
Confidence 765
No 58
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.83 E-value=1.8e-08 Score=105.64 Aligned_cols=57 Identities=16% Similarity=0.180 Sum_probs=46.4
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe----CCe--EEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS----EGE--TAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~----~g~--~~~ad~VI~~~~~~p 289 (445)
..+..++.+.++..|++++.+++|++|..+ ++++++|.. +|+ +++||.||.+.+.+.
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 367788888888999999999999999984 667777762 343 799999999988763
No 59
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.82 E-value=1.1e-08 Score=106.20 Aligned_cols=57 Identities=21% Similarity=0.271 Sum_probs=47.5
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS-EGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~-~g~~~~ad~VI~~~~~~p 289 (445)
..+.+.+.+.++..|++++++++|++|.. +++++.+|.. +|+++.||.||.+.+..+
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~-~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHM-EDGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEE-SSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 45667777778888999999999999998 4677887775 678899999999988776
No 60
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.80 E-value=2.1e-09 Score=106.44 Aligned_cols=41 Identities=29% Similarity=0.485 Sum_probs=37.7
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
|+ +|||+|||||++||+||..|+++|++|+|+||++.+|..
T Consensus 2 Me-~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~ 42 (397)
T 3oz2_A 2 ME-TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP 42 (397)
T ss_dssp EE-EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS
T ss_pred CC-CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCC
Confidence 55 599999999999999999999999999999999888753
No 61
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.71 E-value=1.2e-07 Score=94.49 Aligned_cols=56 Identities=14% Similarity=0.090 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHHc-CcEEEeCCcceeEEEcCCCcEE-EEE-eCCeEEEcCEEEECCCCCC
Q 036458 233 ELPQAFARLSAVY-GGTYMLNKPECKVEFDGDGKVI-GVT-SEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 233 ~L~q~l~r~~~~~-Gg~i~l~~~V~~I~~~~~g~~~-~v~-~~g~~~~ad~VI~~~~~~p 289 (445)
.+.+.|.+.++.. |++++++++|++|..+ ++.++ .|+ .+|++++||.||.+.+..+
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~-~~~v~g~v~~~~g~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRD-ERHAIDQVRLNDGRVLRPRVVVGADGIAS 166 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEEC-TTSCEEEEEETTSCEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEc-CCceEEEEEECCCCEEECCEEEECCCCCh
Confidence 4455666667776 8999999999999885 44442 344 4777899999999887654
No 62
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.71 E-value=4.4e-08 Score=98.47 Aligned_cols=59 Identities=17% Similarity=0.125 Sum_probs=50.0
Q ss_pred cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCCc
Q 036458 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS-EGETAKCKKVVCDPSYLPD 290 (445)
Q Consensus 231 ~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~-~g~~~~ad~VI~~~~~~p~ 290 (445)
..++.+.+.+.++..|++++++++|++|.. +++++.+|.. +|+++.||.||.+.++.|.
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 456778888888999999999999999987 4677777774 7889999999999987764
No 63
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.68 E-value=1.2e-08 Score=98.29 Aligned_cols=44 Identities=27% Similarity=0.480 Sum_probs=38.1
Q ss_pred CCC-cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 1 MDE-DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 1 m~~-~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
|.+ +|||+|||+|.+|++||..|++.|++|+++|++ .+||.+..
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~ 46 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMAN 46 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeec
Confidence 665 799999999999999999999999999999985 68887753
No 64
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.67 E-value=1.1e-08 Score=99.39 Aligned_cols=42 Identities=29% Similarity=0.315 Sum_probs=38.5
Q ss_pred CcccEEEECCChhHHHHHHHhhh--CCCeEEEEecCCCCCCccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSV--DGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~--~G~~VlvlE~n~~~GG~~~ 44 (445)
.++||+|||+|++||+||.+|++ .|++|+|+||++++||.+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE
Confidence 36899999999999999999974 5999999999999999875
No 65
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.65 E-value=1.5e-08 Score=97.27 Aligned_cols=38 Identities=21% Similarity=0.229 Sum_probs=35.5
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
|++.|||+|||+|++|++||..|++.|++|+++|++..
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 88899999999999999999999999999999999864
No 66
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.53 E-value=3.3e-08 Score=100.95 Aligned_cols=45 Identities=29% Similarity=0.330 Sum_probs=41.9
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
|..+|||+|||+|.+|++||..|++.|++|+++||++.+||.|..
T Consensus 1 M~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~ 45 (466)
T 3l8k_A 1 MSLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLY 45 (466)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHH
T ss_pred CCccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccc
Confidence 777899999999999999999999999999999999999998764
No 67
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.53 E-value=7e-07 Score=89.30 Aligned_cols=59 Identities=20% Similarity=0.311 Sum_probs=49.6
Q ss_pred cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCCc
Q 036458 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS-EGETAKCKKVVCDPSYLPD 290 (445)
Q Consensus 231 ~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~-~g~~~~ad~VI~~~~~~p~ 290 (445)
..++.+.+.+.++..|++++++++|++|..+ ++++.+|.. +|+++.||.||++.++.|.
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSDGNTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECcCCccC
Confidence 4577888888889999999999999999874 667777774 7889999999999887654
No 68
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.52 E-value=3.2e-07 Score=93.21 Aligned_cols=56 Identities=7% Similarity=0.106 Sum_probs=45.3
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
.++.+.+.+.++..|.+++++++|++|.. +++++ .|..+++++.||.||.+.+..|
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v-~v~~~~g~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEE-TANGI-VLETSEQEISCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEE-CSSCE-EEEESSCEEEESEEEECSCCBC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEc-cCCeE-EEEECCCEEEeCEEEECcCCCC
Confidence 46778888888899999999999999987 35565 5665545899999999887665
No 69
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.51 E-value=5.8e-08 Score=93.18 Aligned_cols=40 Identities=23% Similarity=0.191 Sum_probs=35.3
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGES 43 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~ 43 (445)
++|||+|||+|++||+||.+|+|+|++|+++|++. +||..
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~ 44 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRV 44 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGG
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCee
Confidence 36999999999999999999999999999999975 56643
No 70
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.47 E-value=7.4e-08 Score=94.62 Aligned_cols=45 Identities=11% Similarity=0.213 Sum_probs=40.5
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
|...+||+|||+|++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 55 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAA 55 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccc
Confidence 455799999999999999999999999999999999999998753
No 71
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.46 E-value=1.3e-07 Score=93.00 Aligned_cols=41 Identities=24% Similarity=0.279 Sum_probs=37.4
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
|..++||+|||+|++|+++|+.|+++|++|+|+||+...+|
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 67789999999999999999999999999999999985444
No 72
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.46 E-value=8.4e-08 Score=93.04 Aligned_cols=45 Identities=22% Similarity=0.331 Sum_probs=40.9
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
|..++||+|||+|++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 46 (335)
T 2zbw_A 2 AADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTA 46 (335)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHH
T ss_pred CCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeec
Confidence 445799999999999999999999999999999999999998753
No 73
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.45 E-value=6.4e-07 Score=91.50 Aligned_cols=58 Identities=17% Similarity=0.122 Sum_probs=47.9
Q ss_pred cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 231 ~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
-.++.+.+.+.++..|.+++++++|++|.. +++++..+..+|+++.||.||.+.+..|
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~v~~~~g~~i~aD~Vv~a~G~~p 258 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEG-ENGKVARVITDKRTLDADLVILAAGVSP 258 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEESSCEEECSEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEc-cCCeEEEEEeCCCEEEcCEEEECCCCCc
Confidence 456788888888999999999999999987 4666654456888999999999988765
No 74
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.43 E-value=1.1e-07 Score=97.87 Aligned_cols=43 Identities=28% Similarity=0.489 Sum_probs=39.2
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
.+|||+|||||.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~ 66 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLN 66 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 4599999999999999999999999999999999999998654
No 75
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.43 E-value=1.4e-07 Score=90.84 Aligned_cols=44 Identities=25% Similarity=0.463 Sum_probs=39.0
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
|+.++||+|||+|++|+++|..|++.|++|+++|+ ..+||.+..
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~ 56 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAE 56 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGG
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccc
Confidence 56679999999999999999999999999999999 578887653
No 76
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.42 E-value=1.5e-07 Score=94.22 Aligned_cols=41 Identities=20% Similarity=0.310 Sum_probs=36.1
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCe-EEEEecCCCCCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLK-VLHMDRNAYYGG 41 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~-VlvlE~n~~~GG 41 (445)
|.+++||+|||||++||++|..|+++|.+ |+|+||++.++.
T Consensus 1 M~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~ 42 (410)
T 3c96_A 1 MSEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRP 42 (410)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCccc
Confidence 66789999999999999999999999999 999999988764
No 77
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.41 E-value=1.4e-07 Score=91.20 Aligned_cols=45 Identities=18% Similarity=0.227 Sum_probs=40.0
Q ss_pred CCcccEEEECCChhHHHHHHHhhhCCCeEEEEec----CCCCCCccccc
Q 036458 2 DEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDR----NAYYGGESTSL 46 (445)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~----n~~~GG~~~s~ 46 (445)
+..+||+|||+|++||++|..|+++|++|+++|+ +..+||.+...
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~ 68 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTT 68 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccc
Confidence 4568999999999999999999999999999999 55899987653
No 78
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.39 E-value=1.4e-07 Score=96.76 Aligned_cols=57 Identities=16% Similarity=0.166 Sum_probs=45.0
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
.++.+.+.+.++..|.+++++++|++|..+ ++++.....+|+++.||.||.+.+..|
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~v~v~~~~g~~i~aD~Vi~A~G~~p 288 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQST-ENCYNVVLTNGQTICADRVMLATGRVP 288 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEC-SSSEEEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEee-CCEEEEEECCCcEEEcCEEEEeeCCCc
Confidence 357788888888899999999999999874 555533335788899999999887654
No 79
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.39 E-value=1.4e-07 Score=96.19 Aligned_cols=43 Identities=30% Similarity=0.457 Sum_probs=38.4
Q ss_pred CCC-cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 1 MDE-DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 1 m~~-~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
|.+ +|||+|||+|++|+++|..|++.|++|+++|+ +.+||.|.
T Consensus 1 M~~~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~ 44 (463)
T 4dna_A 1 MSAFDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCV 44 (463)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHH
T ss_pred CCCCCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCccc
Confidence 553 79999999999999999999999999999999 78999765
No 80
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.39 E-value=2.2e-07 Score=88.42 Aligned_cols=41 Identities=22% Similarity=0.357 Sum_probs=37.8
Q ss_pred CcccEEEECCChhHHHHHHHhhhC-CCeEEEEecCCCCCCcc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVD-GLKVLHMDRNAYYGGES 43 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~-G~~VlvlE~n~~~GG~~ 43 (445)
.++||+|||+|++||++|..|++. |.+|+|+|+++.+||.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 358999999999999999999997 99999999999998753
No 81
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.38 E-value=2.3e-07 Score=89.07 Aligned_cols=40 Identities=28% Similarity=0.310 Sum_probs=37.8
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
++||+|||+|++||++|..|+++|++|+++|++ +||.+..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~ 54 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE 54 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc
Confidence 589999999999999999999999999999999 9998765
No 82
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.38 E-value=2.7e-07 Score=93.64 Aligned_cols=44 Identities=16% Similarity=0.221 Sum_probs=40.8
Q ss_pred CCcccEEEECCChhHHHHHHHhhhCCC--eEEEEecCCCCCCcccc
Q 036458 2 DEDYDVIVLGTGLKECILSGVLSVDGL--KVLHMDRNAYYGGESTS 45 (445)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~~~GG~~~s 45 (445)
...+||+|||||++||++|..|++.|. +|+++|+++.+||.|..
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~ 49 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecC
Confidence 457999999999999999999999999 99999999999997754
No 83
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.37 E-value=2.2e-07 Score=89.76 Aligned_cols=43 Identities=23% Similarity=0.373 Sum_probs=39.2
Q ss_pred CCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 2 DEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
...+||+|||+|++|+++|..|++.|++|+++|++ .+||.+..
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 48 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAW 48 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccc
Confidence 34689999999999999999999999999999999 78998764
No 84
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.37 E-value=2.1e-07 Score=90.63 Aligned_cols=44 Identities=32% Similarity=0.410 Sum_probs=40.9
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
|+ ++||+|||+|++||++|..|++.|++|+++|+++.+||.|..
T Consensus 1 m~-~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~ 44 (357)
T 4a9w_A 1 MD-SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH 44 (357)
T ss_dssp CE-EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG
T ss_pred CC-cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC
Confidence 44 589999999999999999999999999999999999998764
No 85
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.37 E-value=1.2e-07 Score=97.02 Aligned_cols=45 Identities=16% Similarity=0.342 Sum_probs=41.7
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
|..+|||+|||+|++|+++|..|++.|++|+++|+++.+||.|..
T Consensus 2 M~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 46 (478)
T 1v59_A 2 INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLN 46 (478)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccce
Confidence 666799999999999999999999999999999999999997643
No 86
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.37 E-value=1.4e-07 Score=96.72 Aligned_cols=44 Identities=34% Similarity=0.474 Sum_probs=41.4
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
|+.+|||+|||+|.+|+++|..|++.|++|+++|+++.+||.+.
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 46 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCL 46 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcee
Confidence 67789999999999999999999999999999999999999764
No 87
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.35 E-value=2.7e-07 Score=92.25 Aligned_cols=38 Identities=16% Similarity=0.178 Sum_probs=34.5
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
+++||+|||||++||++|..|+++|++|+|+||++.++
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~ 59 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIK 59 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 46999999999999999999999999999999998664
No 88
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.35 E-value=3e-07 Score=95.24 Aligned_cols=44 Identities=30% Similarity=0.434 Sum_probs=40.9
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
|..++||+|||||.+|++||..|++.|++|+++|+++++||.|.
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 83 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCP 83 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCccc
Confidence 45679999999999999999999999999999999999999875
No 89
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.34 E-value=3.8e-07 Score=90.95 Aligned_cols=40 Identities=20% Similarity=0.351 Sum_probs=36.9
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
+++||+|||||++||++|..|+++|.+|+|+||++.++++
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~ 64 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR 64 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc
Confidence 5689999999999999999999999999999999887653
No 90
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.33 E-value=5.5e-07 Score=92.74 Aligned_cols=41 Identities=32% Similarity=0.501 Sum_probs=36.8
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
|..++||+|||||++||++|..|+++|.+|+|+||++.++.
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 48 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTG 48 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 45689999999999999999999999999999999987653
No 91
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.33 E-value=2.4e-07 Score=89.36 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=39.3
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
.+||+|||+|++||++|..|++.|++|+++|+++.+||.+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~ 47 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLS 47 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeh
Confidence 48999999999999999999999999999999999999885
No 92
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.32 E-value=3.6e-07 Score=88.84 Aligned_cols=40 Identities=23% Similarity=0.349 Sum_probs=37.5
Q ss_pred cccEEEECCChhHHHHHHHhhhC--CCeEEEEecCCCCCCcc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVD--GLKVLHMDRNAYYGGES 43 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~n~~~GG~~ 43 (445)
+|||+|||+|++||++|+.|+++ |++|+++|+++.+||.+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 58999999999999999999997 99999999999998754
No 93
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.32 E-value=3.6e-07 Score=93.47 Aligned_cols=57 Identities=11% Similarity=0.137 Sum_probs=43.4
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCC---eEEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEG---ETAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g---~~~~ad~VI~~~~~~p 289 (445)
.++.+.+.+.++..|.+++++++|++|..+ ++.+.....++ +++.+|.||.+.+..|
T Consensus 221 ~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~-~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 221 EQVAKEAQKILTKQGLKILLGARVTGTEVK-NKQVTVKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCEEEEEEEC-SSCEEEEEESSSEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEc-CCEEEEEEEeCCCcEEEECCEEEEeeCCcc
Confidence 457778888888999999999999999874 44444333433 6799999999877554
No 94
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.32 E-value=1.8e-07 Score=95.08 Aligned_cols=39 Identities=31% Similarity=0.531 Sum_probs=36.1
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYY 39 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~ 39 (445)
|+.++||+|||||++||++|..|+++|++|+|+|+++.+
T Consensus 3 m~~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 3 KELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp EEEECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 455799999999999999999999999999999999865
No 95
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.32 E-value=3.2e-07 Score=93.61 Aligned_cols=57 Identities=14% Similarity=0.161 Sum_probs=45.8
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCCc
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPD 290 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p~ 290 (445)
.++.+.+.+.++..|.+++++++|++|..+ ++ ...+..+++++.||.||.+.+..|.
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~-~~~v~~~~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHM-DG-EFVLTTTHGELRADKLLVATGRTPN 272 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEE-TT-EEEEEETTEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CC-EEEEEECCcEEEcCEEEECCCCCcC
Confidence 367788888889999999999999999863 43 3456667788999999998876653
No 96
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.32 E-value=4.1e-07 Score=93.75 Aligned_cols=57 Identities=14% Similarity=0.115 Sum_probs=46.4
Q ss_pred cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe----CCe--EEEcCEEEECCCCCC
Q 036458 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS----EGE--TAKCKKVVCDPSYLP 289 (445)
Q Consensus 231 ~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~----~g~--~~~ad~VI~~~~~~p 289 (445)
-..+..++.+.++..|++++++++|++|..+ + ++++|.+ +|+ +++||.||.+.+.+.
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~-~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARRE-N-GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEE-T-TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEe-C-CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 3468889999999999999999999999884 4 5666664 565 799999999988764
No 97
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.31 E-value=2.8e-07 Score=93.97 Aligned_cols=43 Identities=21% Similarity=0.396 Sum_probs=39.6
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
|..+|||+|||+|.+|+++|..|++.|++|+++|++ .+||.|.
T Consensus 1 M~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 43 (463)
T 2r9z_A 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCV 43 (463)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCc
Confidence 777899999999999999999999999999999998 7899875
No 98
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.29 E-value=3.8e-07 Score=94.44 Aligned_cols=45 Identities=27% Similarity=0.383 Sum_probs=40.2
Q ss_pred CCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCC--------CCCCccccc
Q 036458 2 DEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA--------YYGGESTSL 46 (445)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~--------~~GG~~~s~ 46 (445)
..+|||+|||+|.+|++||..|++.|++|+++|+++ .+||.|...
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~ 82 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNV 82 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCc
Confidence 357999999999999999999999999999999975 899987543
No 99
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.28 E-value=3.2e-07 Score=93.16 Aligned_cols=43 Identities=23% Similarity=0.347 Sum_probs=38.7
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
|..+|||+|||+|.+|++||..|++.|++|+++|++ .+||.|.
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 43 (450)
T 1ges_A 1 MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCV 43 (450)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHH
T ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCccc
Confidence 777899999999999999999999999999999998 7899875
No 100
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.27 E-value=5.2e-07 Score=92.03 Aligned_cols=44 Identities=18% Similarity=0.370 Sum_probs=40.8
Q ss_pred CCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 2 DEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
+++|||+|||+|++|++||..|++.|++|+++|+++.+||.|..
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLN 47 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccC
Confidence 45799999999999999999999999999999999999998753
No 101
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.27 E-value=6.5e-07 Score=88.58 Aligned_cols=38 Identities=16% Similarity=0.153 Sum_probs=36.0
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
.+||+|||||++||++|..|+++|++|+|+|+++.+++
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~ 48 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA 48 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC
Confidence 58999999999999999999999999999999998865
No 102
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.26 E-value=4.3e-07 Score=86.86 Aligned_cols=43 Identities=26% Similarity=0.336 Sum_probs=39.1
Q ss_pred CCcccEEEECCChhHHHHHHHhhhCCCeEEE-EecCCCCCCcccc
Q 036458 2 DEDYDVIVLGTGLKECILSGVLSVDGLKVLH-MDRNAYYGGESTS 45 (445)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~Vlv-lE~n~~~GG~~~s 45 (445)
+..+||+|||+|++||+||..|+++|++|++ +|| +.+||.+..
T Consensus 2 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 2 NAMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 3568999999999999999999999999999 999 788998754
No 103
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.26 E-value=5.6e-07 Score=86.99 Aligned_cols=41 Identities=29% Similarity=0.374 Sum_probs=37.9
Q ss_pred CcccEEEECCChhHHHHHHHhhhC--CCeEEEEecCCCCCCcc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVD--GLKVLHMDRNAYYGGES 43 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~n~~~GG~~ 43 (445)
.++||+|||+|++||++|..|+++ |++|+++|+++.+||..
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 357999999999999999999999 99999999999999754
No 104
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.26 E-value=5.8e-07 Score=94.97 Aligned_cols=44 Identities=32% Similarity=0.485 Sum_probs=38.7
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
|..+|||||||+|++|+++|..|+++|++|+++|+.+..||.+.
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~ 86 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKI 86 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSST
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCccc
Confidence 45679999999999999999999999999999999999998553
No 105
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.26 E-value=3.8e-07 Score=93.79 Aligned_cols=43 Identities=26% Similarity=0.319 Sum_probs=38.7
Q ss_pred CCC-cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 1 MDE-DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 1 m~~-~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
|.+ +|||+|||+|.+|++||..|++.|++|+++|++. +||.|.
T Consensus 4 M~~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~ 47 (492)
T 3ic9_A 4 MKVINVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCA 47 (492)
T ss_dssp CEEEEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHH
T ss_pred CccCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCccc
Confidence 443 5999999999999999999999999999999975 999874
No 106
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.25 E-value=5.4e-07 Score=93.79 Aligned_cols=42 Identities=26% Similarity=0.273 Sum_probs=39.7
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
.++||+|||||++|+++|..|+++|++|+++|+++.+||.|.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~ 56 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY 56 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 468999999999999999999999999999999999999875
No 107
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.25 E-value=4.9e-07 Score=92.28 Aligned_cols=42 Identities=26% Similarity=0.419 Sum_probs=39.6
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
+|||+|||+|++|++||..|++.|++|+++|+++++||.|..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 43 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLN 43 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCC
Confidence 589999999999999999999999999999999999998753
No 108
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.24 E-value=4.7e-07 Score=88.87 Aligned_cols=44 Identities=18% Similarity=0.290 Sum_probs=39.6
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCC-eEEEEecCCCCCCccccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNAYYGGESTSL 46 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~~~GG~~~s~ 46 (445)
|. ++||+|||||++|+++|..|++.|+ +|+++|+++ +||.+..+
T Consensus 2 m~-~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~ 46 (369)
T 3d1c_A 2 MQ-HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHW 46 (369)
T ss_dssp CC-EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTS
T ss_pred Cc-cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccC
Confidence 54 6899999999999999999999999 999999999 99976543
No 109
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.24 E-value=8.6e-07 Score=93.06 Aligned_cols=56 Identities=18% Similarity=0.115 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe--CC--eEEEcCEEEECCCCCC
Q 036458 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS--EG--ETAKCKKVVCDPSYLP 289 (445)
Q Consensus 233 ~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~--~g--~~~~ad~VI~~~~~~p 289 (445)
.+.+.|.+.++..|++++.+++|++|..+ ++..++|+. +| .++.||.||.+.+...
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 55666777778889999999999999874 555566653 66 5799999999887653
No 110
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.24 E-value=4.5e-07 Score=92.77 Aligned_cols=42 Identities=19% Similarity=0.311 Sum_probs=38.3
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
.+|||+|||+|.+|++||..|++.|++|+++|++ .+||.|..
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~ 60 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVN 60 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccc
Confidence 4699999999999999999999999999999976 78998743
No 111
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.24 E-value=4e-07 Score=93.70 Aligned_cols=57 Identities=23% Similarity=0.316 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEE-eCCeEEEcCEEEECCCCCCc
Q 036458 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVT-SEGETAKCKKVVCDPSYLPD 290 (445)
Q Consensus 233 ~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~-~~g~~~~ad~VI~~~~~~p~ 290 (445)
++.+.+.+.++..|.+++++++|++|..++++.+ .|. .+|+++.||.||++.+..|.
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-~v~~~~G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLNTDGSK-HVTFESGKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceE-EEEECCCcEEEcCEEEECCCCccc
Confidence 5677888888899999999999999987433333 444 57888999999999876653
No 112
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.22 E-value=6.1e-07 Score=89.74 Aligned_cols=56 Identities=14% Similarity=0.144 Sum_probs=41.4
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcce---------eEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPEC---------KVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~---------~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
..+.++|.+.++..|++++++++|+ +|..+ ++++ +|.+++.+++||.||.+.+.+.
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETRQIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECCcEEECCEEEECCCccH
Confidence 5688889998888999999999999 88763 5555 6666555899999999987663
No 113
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.22 E-value=9.8e-07 Score=87.90 Aligned_cols=39 Identities=18% Similarity=0.195 Sum_probs=35.0
Q ss_pred CC-CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCC
Q 036458 1 MD-EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYY 39 (445)
Q Consensus 1 m~-~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~ 39 (445)
|. ..+||+|||||++||++|..|+++|++|+|+||++..
T Consensus 1 M~~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP 40 (397)
T ss_dssp -CCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 44 4589999999999999999999999999999999764
No 114
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.22 E-value=1.2e-06 Score=90.14 Aligned_cols=38 Identities=29% Similarity=0.487 Sum_probs=35.6
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
.++||+|||||++||++|..|+++|.+|+|+||++.++
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~ 48 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRT 48 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 46899999999999999999999999999999998764
No 115
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.22 E-value=6.7e-07 Score=91.78 Aligned_cols=43 Identities=23% Similarity=0.288 Sum_probs=39.4
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEec--------CCCCCCcccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDR--------NAYYGGESTS 45 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~--------n~~~GG~~~s 45 (445)
.+|||+|||+|.+|++||..|++.|++|+++|| +..+||.|..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~ 55 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVN 55 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecc
Confidence 469999999999999999999999999999998 6789998754
No 116
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.21 E-value=6.4e-07 Score=91.06 Aligned_cols=42 Identities=24% Similarity=0.374 Sum_probs=39.4
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
+|||+|||+|++|++||..|++.|++|+++|+++.+||.|..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 42 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLR 42 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccce
Confidence 489999999999999999999999999999999999998753
No 117
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.21 E-value=9.9e-07 Score=81.25 Aligned_cols=37 Identities=22% Similarity=0.379 Sum_probs=33.5
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
|. +|||+|||+|++||.+|..|++.|.+|+++|++..
T Consensus 1 M~-~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~ 37 (232)
T 2cul_A 1 MA-AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLD 37 (232)
T ss_dssp -C-CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred CC-CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 54 59999999999999999999999999999999843
No 118
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.21 E-value=6.8e-07 Score=90.91 Aligned_cols=42 Identities=26% Similarity=0.268 Sum_probs=39.2
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
+.+||+|||+|++||++|..|++.|++|+++|+++++||.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 458999999999999999999999999999999999999753
No 119
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.21 E-value=6.1e-07 Score=91.86 Aligned_cols=58 Identities=7% Similarity=0.007 Sum_probs=44.3
Q ss_pred hHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEE-eCC-eEEEcCEEEECCCCCCc
Q 036458 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVT-SEG-ETAKCKKVVCDPSYLPD 290 (445)
Q Consensus 233 ~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~-~~g-~~~~ad~VI~~~~~~p~ 290 (445)
++.+.+.+.++..|.+++++++|++|..+++++...+. .+| +++.||.||.+.+..|.
T Consensus 227 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~ 286 (479)
T 2hqm_A 227 CIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSH 286 (479)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCc
Confidence 57777888888899999999999999874344234454 477 78999999998876543
No 120
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.20 E-value=6.2e-07 Score=86.20 Aligned_cols=43 Identities=16% Similarity=0.221 Sum_probs=38.3
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
|.+.+||+|||+|++|+++|..|++.|++|+++|++ .+||.+.
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 44 (320)
T 1trb_A 2 TTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLT 44 (320)
T ss_dssp CEEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGG
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEe
Confidence 345789999999999999999999999999999975 7888764
No 121
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.19 E-value=7.3e-07 Score=93.58 Aligned_cols=58 Identities=17% Similarity=0.249 Sum_probs=46.3
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeC----------------CeEEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSE----------------GETAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~----------------g~~~~ad~VI~~~~~~p 289 (445)
+.+.+.|.+.++..|++|+++++|++|..++++++++|.+. |.+++||.||.+.+...
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 46667777888888999999999999998655778777642 36899999999887653
No 122
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.19 E-value=7.6e-07 Score=86.43 Aligned_cols=44 Identities=23% Similarity=0.275 Sum_probs=38.8
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
|...+||+|||+|++|+++|..|++.|++|+++|++ .+||.+..
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 54 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMT 54 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceec
Confidence 345699999999999999999999999999999976 78887643
No 123
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.19 E-value=8.9e-07 Score=92.04 Aligned_cols=39 Identities=21% Similarity=0.349 Sum_probs=34.8
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGES 43 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~ 43 (445)
++||||||+|++||+||..|++ |.+|+|+||++..||..
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s 46 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGST 46 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC---
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCCh
Confidence 6999999999999999999999 99999999999887654
No 124
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.19 E-value=8.1e-07 Score=92.51 Aligned_cols=45 Identities=24% Similarity=0.325 Sum_probs=40.9
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTSLN 47 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s~~ 47 (445)
.++||+|||||++|+.+|..|++.|++|+++|+++.+||.|...+
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ 64 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNR 64 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCC
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCC
Confidence 458999999999999999999999999999999999999776433
No 125
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.19 E-value=8e-07 Score=95.19 Aligned_cols=43 Identities=28% Similarity=0.397 Sum_probs=40.3
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
..+||+|||+|++||+||..|++.|++|+++|+++++||.+..
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 4689999999999999999999999999999999999998764
No 126
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.18 E-value=1.3e-06 Score=89.82 Aligned_cols=40 Identities=15% Similarity=0.260 Sum_probs=37.2
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
..+||+|||||++||++|..|++.|++|+|+|+++.+|+.
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~ 130 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH 130 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC
Confidence 4689999999999999999999999999999999988754
No 127
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.18 E-value=7.7e-07 Score=90.92 Aligned_cols=43 Identities=26% Similarity=0.386 Sum_probs=39.9
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
.+|||+|||+|.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLN 47 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccc
Confidence 3589999999999999999999999999999999999998753
No 128
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.16 E-value=1.4e-06 Score=90.43 Aligned_cols=40 Identities=30% Similarity=0.502 Sum_probs=36.7
Q ss_pred CC-CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 1 MD-EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 1 m~-~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
|. .++||+|||||++||++|+.|++.|.+|+|+||++.++
T Consensus 1 M~~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~ 41 (535)
T 3ihg_A 1 MNDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLS 41 (535)
T ss_dssp CCCCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCC
T ss_pred CCCccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 54 46999999999999999999999999999999998765
No 129
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.16 E-value=9.1e-07 Score=93.93 Aligned_cols=56 Identities=18% Similarity=0.130 Sum_probs=45.2
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe----CCe--EEEcCEEEECCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS----EGE--TAKCKKVVCDPSYL 288 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~----~g~--~~~ad~VI~~~~~~ 288 (445)
..|.++|.+.+...|++++.+++|++|..+ ++++.+|.. +|+ .+.|+.||.+.+-+
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQ-DGKCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEec-CCEEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 368889999888889999999999999984 778888752 455 58999999876543
No 130
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.15 E-value=8.2e-07 Score=90.47 Aligned_cols=42 Identities=31% Similarity=0.514 Sum_probs=38.6
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
|. +|||+|||+|++|+++|..|++.|++|+++|++ .+||.+.
T Consensus 1 M~-~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~ 42 (464)
T 2a8x_A 1 MT-HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCL 42 (464)
T ss_dssp CE-EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHH
T ss_pred CC-cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCccc
Confidence 54 699999999999999999999999999999998 7888764
No 131
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.15 E-value=1.2e-06 Score=90.33 Aligned_cols=56 Identities=20% Similarity=0.189 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe---CC--eEEEcCEEEECCCCCC
Q 036458 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS---EG--ETAKCKKVVCDPSYLP 289 (445)
Q Consensus 233 ~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~---~g--~~~~ad~VI~~~~~~p 289 (445)
.+.+.|.+.++..|++++++++|++|..+ ++++.+|.. +| .+++||.||.+.+...
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 45666777777889999999999999984 677766652 46 3899999999877653
No 132
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.15 E-value=8.2e-07 Score=93.63 Aligned_cols=56 Identities=18% Similarity=0.271 Sum_probs=45.4
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe----CCe--EEEcCEEEECCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS----EGE--TAKCKKVVCDPSYL 288 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~----~g~--~~~ad~VI~~~~~~ 288 (445)
.+|.++|.+.+...|++++.++.|++|..+ ++++.||.. +|+ ++.|+.||.+.+-+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 216 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVIATGGY 216 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCcc
Confidence 368888988888889999999999999984 778888763 454 68999999876543
No 133
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.14 E-value=1.3e-06 Score=82.62 Aligned_cols=39 Identities=18% Similarity=0.190 Sum_probs=35.2
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
++||+|||+|++||++|..|++.|++|+++|+++..|+.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~ 40 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRF 40 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCccccc
Confidence 389999999999999999999999999999998765543
No 134
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.14 E-value=1.3e-06 Score=90.86 Aligned_cols=43 Identities=23% Similarity=0.379 Sum_probs=40.0
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
.++||||||||++|+++|..|++.|++|+++|+++.+||.|..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~ 50 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYW 50 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccc
Confidence 3589999999999999999999999999999999999998753
No 135
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.13 E-value=1.6e-06 Score=83.03 Aligned_cols=40 Identities=18% Similarity=0.300 Sum_probs=36.8
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC-eEEEEecCCCCCCcccc
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNAYYGGESTS 45 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~~~GG~~~s 45 (445)
|||+|||+|++|+++|..|++.|+ +|+++|++ .+||.+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~ 42 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITG 42 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccc
Confidence 799999999999999999999999 99999995 68887753
No 136
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.13 E-value=9.5e-07 Score=85.44 Aligned_cols=42 Identities=19% Similarity=0.244 Sum_probs=38.4
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEec----CCCCCCcccc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDR----NAYYGGESTS 45 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~----n~~~GG~~~s 45 (445)
.+||+|||+|++|+++|..|++.|++|+++|+ ....||.+..
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 53 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTT 53 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeee
Confidence 58999999999999999999999999999999 6788887654
No 137
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.13 E-value=1.6e-06 Score=88.36 Aligned_cols=41 Identities=17% Similarity=0.358 Sum_probs=39.0
Q ss_pred ccEEEECCChhHHHHHHHhhh---CCCe---EEEEecCCCCCCcccc
Q 036458 5 YDVIVLGTGLKECILSGVLSV---DGLK---VLHMDRNAYYGGESTS 45 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~---~G~~---VlvlE~n~~~GG~~~s 45 (445)
+||+|||||++||+||..|++ .|.+ |+++|+++.+||.|..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 699999999999999999999 9999 9999999999998864
No 138
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.13 E-value=1.7e-06 Score=90.45 Aligned_cols=38 Identities=26% Similarity=0.347 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
.++||||||+|++||++|+.|+++|++|+|+||++.++
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~ 85 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPV 85 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCC
Confidence 35899999999999999999999999999999998764
No 139
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.12 E-value=1.4e-06 Score=90.62 Aligned_cols=44 Identities=23% Similarity=0.244 Sum_probs=40.3
Q ss_pred cccEEEECCChhHHHHHHHhh-hCCCeEEEEecCCCCCCcccccc
Q 036458 4 DYDVIVLGTGLKECILSGVLS-VDGLKVLHMDRNAYYGGESTSLN 47 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La-~~G~~VlvlE~n~~~GG~~~s~~ 47 (445)
++||+|||||++|+++|..|+ +.|++|+++|+++.+||.+...+
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ 52 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNR 52 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccC
Confidence 589999999999999999999 99999999999999999876433
No 140
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.12 E-value=1.1e-06 Score=89.74 Aligned_cols=40 Identities=35% Similarity=0.456 Sum_probs=37.6
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
+|||+|||+|.+|++||..|++.|++|+++|+++ +||.|.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~ 45 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCL 45 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCC
Confidence 5999999999999999999999999999999998 898764
No 141
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.12 E-value=1.5e-06 Score=89.11 Aligned_cols=58 Identities=14% Similarity=0.078 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCC-----eEEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEG-----ETAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g-----~~~~ad~VI~~~~~~p 289 (445)
.++.+.+.+.++..|.++++++.|++|..++++.+.....++ .++.||.||++.+..|
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccccc
Confidence 357777888888999999999999999874445443222333 2789999999987654
No 142
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.12 E-value=1.4e-06 Score=86.48 Aligned_cols=36 Identities=19% Similarity=0.372 Sum_probs=33.7
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYY 39 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~ 39 (445)
++||+|||||++||++|..|+++|++|+|+|+++..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 37 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPD 37 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 489999999999999999999999999999998753
No 143
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.12 E-value=1.4e-06 Score=91.51 Aligned_cols=57 Identities=19% Similarity=0.146 Sum_probs=45.7
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe----CCe--EEEcCEEEECCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS----EGE--TAKCKKVVCDPSYL 288 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~----~g~--~~~ad~VI~~~~~~ 288 (445)
.++.++|.+.+...|++++++++|++|..++++++.+|.. +|+ ++.|+.||.+.+-+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 4788889888888899999999999999843678888762 454 68999999876543
No 144
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.10 E-value=1.3e-06 Score=85.45 Aligned_cols=36 Identities=14% Similarity=0.038 Sum_probs=33.3
Q ss_pred cEEEECCChhHHHHHHHhhhCC------CeEEEEecCCCCCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDG------LKVLHMDRNAYYGG 41 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G------~~VlvlE~n~~~GG 41 (445)
||||||||++||++|+.|+++| ++|+|+|++...+|
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 8999999999999999999998 99999999986544
No 145
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.10 E-value=2.1e-06 Score=89.42 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=36.1
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
++||+|||||++||++|..|+++|.+|+|+||++.+++.
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~ 64 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITH 64 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC
Confidence 589999999999999999999999999999999877643
No 146
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.09 E-value=1.5e-06 Score=88.27 Aligned_cols=41 Identities=20% Similarity=0.270 Sum_probs=38.2
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
.+|||+|||+|.+|++||..|++.|++|+++|++ .+||.|.
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~ 42 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCL 42 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCc
Confidence 4689999999999999999999999999999998 8898764
No 147
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.09 E-value=2e-06 Score=85.39 Aligned_cols=35 Identities=29% Similarity=0.394 Sum_probs=32.5
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYY 39 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~ 39 (445)
.+|+|||||++||++|..|+++|++|+|+||++.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 47999999999999999999999999999998654
No 148
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.09 E-value=1.6e-06 Score=88.99 Aligned_cols=57 Identities=21% Similarity=0.230 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEE-eCCeEEEcCEEEECCCCCCc
Q 036458 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVT-SEGETAKCKKVVCDPSYLPD 290 (445)
Q Consensus 233 ~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~-~~g~~~~ad~VI~~~~~~p~ 290 (445)
++.+.+.+.++..|.+++++++|++|..++++.+ .|. .+|+++.||.||.+.+..|.
T Consensus 232 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-~v~~~~G~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 232 ELRKQLTEQLRANGINVRTHENPAKVTKNADGTR-HVVFESGAEADYDVVMLAIGRVPR 289 (490)
T ss_dssp HHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEE-EEEECCCcEEEcCEEEEccCCCcC
Confidence 5778888888899999999999999987433333 344 57778999999998876553
No 149
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.08 E-value=2.7e-06 Score=88.34 Aligned_cols=56 Identities=13% Similarity=0.173 Sum_probs=45.0
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS-EGETAKCKKVVCDPSYL 288 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~-~g~~~~ad~VI~~~~~~ 288 (445)
..+.+.|.+.++..|++++.+ .|++|..++++.+++|.. +|+++.||.||.+.+..
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~ 221 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMR 221 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCc
Confidence 567788888888889999999 899998855666666764 67789999999987654
No 150
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.08 E-value=2.4e-06 Score=90.67 Aligned_cols=39 Identities=15% Similarity=0.247 Sum_probs=35.9
Q ss_pred CCcccEEEECCChhHHHHHHHhhh-CCCeEEEEecCCCCC
Q 036458 2 DEDYDVIVLGTGLKECILSGVLSV-DGLKVLHMDRNAYYG 40 (445)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE~n~~~G 40 (445)
.+++||+|||||++||++|..|++ .|.+|+|+||++.++
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 356899999999999999999999 999999999998764
No 151
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.07 E-value=2.2e-06 Score=89.92 Aligned_cols=39 Identities=28% Similarity=0.440 Sum_probs=35.6
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCC-CCCC
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA-YYGG 41 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~-~~GG 41 (445)
.+|||||||||++||.||..|++.|.+|+++|++. .+|+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 46999999999999999999999999999999985 4555
No 152
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.05 E-value=2.7e-06 Score=89.05 Aligned_cols=54 Identities=15% Similarity=0.156 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHH-cCcEEEeCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCC
Q 036458 233 ELPQAFARLSAV-YGGTYMLNKPECKVEFDGDGKVIGVTS-EGETAKCKKVVCDPSYL 288 (445)
Q Consensus 233 ~L~q~l~r~~~~-~Gg~i~l~~~V~~I~~~~~g~~~~v~~-~g~~~~ad~VI~~~~~~ 288 (445)
.+.+.+.+.++. .|.++ +++.|++|.. +++++.+|.+ +|.++.||.||.+.+.+
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCC
Confidence 455666676766 47888 6889999988 4778888875 67889999999987654
No 153
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.04 E-value=1.5e-06 Score=89.39 Aligned_cols=56 Identities=14% Similarity=0.146 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 233 ~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
++.+.+.+.++..|.+++++++|++|..+ ++++.....+|+++.||.||++.+..|
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~-~~~v~v~~~~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRT-GAGVLVTMTDGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEC-SSSEEEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCEEEEEECCCcEEEcCEEEECCCCCc
Confidence 57788888888999999999999999874 444433335778899999999877654
No 154
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.04 E-value=2.9e-06 Score=91.38 Aligned_cols=43 Identities=23% Similarity=0.321 Sum_probs=40.1
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
+.+||+|||||++||+||..|++.|++|+++|+++++||.+..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 3579999999999999999999999999999999999998754
No 155
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.04 E-value=2.9e-06 Score=88.84 Aligned_cols=57 Identities=23% Similarity=0.197 Sum_probs=46.5
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCC-CcEEEEEe---CCe--EEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGD-GKVIGVTS---EGE--TAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~-g~~~~v~~---~g~--~~~ad~VI~~~~~~p 289 (445)
..+.+.|.+.++..|++++++++|++|..+ + +++++|.. +|+ ++.||.||.+.+-++
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~-~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILED-ASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEEC-CCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 468889999999999999999999999884 5 78888763 564 689999999877554
No 156
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.03 E-value=2.6e-06 Score=87.67 Aligned_cols=59 Identities=10% Similarity=0.008 Sum_probs=45.5
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeE-EEcCEEEECCCCCCc
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGET-AKCKKVVCDPSYLPD 290 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~-~~ad~VI~~~~~~p~ 290 (445)
.++.+.+.+.++..|.++++++.|++|..++++.+.....+|++ +.||.||.+.+..|.
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCT
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcC
Confidence 36777888888999999999999999987433433333357777 999999999887664
No 157
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.03 E-value=2e-06 Score=87.48 Aligned_cols=40 Identities=13% Similarity=0.240 Sum_probs=38.0
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
+|||+|||+|.+|++||..|++.|++|+++|+ +.+||.|.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 58999999999999999999999999999999 78999875
No 158
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.02 E-value=3.1e-06 Score=88.88 Aligned_cols=54 Identities=15% Similarity=0.092 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHH-cCcEEEeCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCC
Q 036458 233 ELPQAFARLSAV-YGGTYMLNKPECKVEFDGDGKVIGVTS-EGETAKCKKVVCDPSYL 288 (445)
Q Consensus 233 ~L~q~l~r~~~~-~Gg~i~l~~~V~~I~~~~~g~~~~v~~-~g~~~~ad~VI~~~~~~ 288 (445)
.+.+.+.+.++. .|.++ ++++|+.|.. +++++++|.+ +|.++.||.||.+.+.+
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTF 180 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCC
Confidence 455666666666 57888 6889999988 4677878875 67889999999887654
No 159
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.02 E-value=3e-06 Score=83.87 Aligned_cols=35 Identities=14% Similarity=0.250 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHhhhC--CCeEEEEecCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVD--GLKVLHMDRNAYY 39 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~n~~~ 39 (445)
.||+|||||++||++|..|+++ |++|+|+||++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 3899999999999999999999 9999999999876
No 160
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.02 E-value=3.4e-06 Score=80.66 Aligned_cols=39 Identities=23% Similarity=0.443 Sum_probs=35.7
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
+|||+|||+|++|+++|..|++.|++|+++|+ .+||.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~ 39 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQIL 39 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceec
Confidence 48999999999999999999999999999986 5888775
No 161
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.01 E-value=2.9e-06 Score=85.62 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=32.1
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.+||+|||||++||++|..|+++|++|+|+|+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3799999999999999999999999999999986
No 162
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.99 E-value=2.9e-06 Score=88.04 Aligned_cols=57 Identities=11% Similarity=-0.049 Sum_probs=45.4
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
.++.+.+.+.++..|..+++++.|.++... ++.+.....+++++.+|.|+++.+-.|
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~-~~~~~v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKM-DDKILVEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEE-TTEEEEEETTSCEEEESEEEECSCEEE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEec-CCeEEEEEcCCCeEEEEEEEEcccccC
Confidence 468888888899999999999999999874 555443345778889999999876544
No 163
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.99 E-value=4e-06 Score=87.63 Aligned_cols=37 Identities=19% Similarity=0.393 Sum_probs=34.0
Q ss_pred CCcccEEEECCChhHHHHHHHhhhCC-CeEEEEecCCC
Q 036458 2 DEDYDVIVLGTGLKECILSGVLSVDG-LKVLHMDRNAY 38 (445)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~n~~ 38 (445)
+++||+||||+|.+||++|.+||+.| .+|+|||+.+.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35799999999999999999999998 69999999866
No 164
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.99 E-value=2.3e-06 Score=88.79 Aligned_cols=38 Identities=32% Similarity=0.558 Sum_probs=35.0
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
.+||+||||+|.+||++|.+|++ |.+|+|||+....++
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~~ 62 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPTA 62 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcCC
Confidence 46999999999999999999999 999999999887654
No 165
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.98 E-value=4.8e-06 Score=73.09 Aligned_cols=33 Identities=39% Similarity=0.517 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
|||+|||+|++|+.+|..|++.|++|+++|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999999999999987
No 166
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.97 E-value=3e-06 Score=93.98 Aligned_cols=42 Identities=29% Similarity=0.359 Sum_probs=40.0
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
.++||+|||+|++|++||..|++.|++|+++|+++++||.+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 358999999999999999999999999999999999999887
No 167
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.97 E-value=2.3e-06 Score=87.90 Aligned_cols=42 Identities=21% Similarity=0.221 Sum_probs=39.0
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
.++||+|||+|++|+++|..|++. ++|+++|+++++||.+..
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~ 148 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL 148 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec
Confidence 357999999999999999999999 999999999999998764
No 168
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.97 E-value=3.9e-06 Score=86.76 Aligned_cols=37 Identities=22% Similarity=0.373 Sum_probs=32.8
Q ss_pred CcccEEEECCChhHHHHHHHhhh-CCCeEEEEecCCCC
Q 036458 3 EDYDVIVLGTGLKECILSGVLSV-DGLKVLHMDRNAYY 39 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE~n~~~ 39 (445)
.+||+||||+|.+|+++|.+||+ .|++|+|||+.+..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~ 53 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEP 53 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCC
Confidence 47999999999999999999998 67999999997553
No 169
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.97 E-value=4e-06 Score=85.12 Aligned_cols=41 Identities=27% Similarity=0.308 Sum_probs=37.6
Q ss_pred CcccEEEECCChhHHHHHHHhhhCC-----CeEEEEecCCCCCCcc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDG-----LKVLHMDRNAYYGGES 43 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G-----~~VlvlE~n~~~GG~~ 43 (445)
+.|||+|||+|++||++|..|++.| .+|+++|+++.+|...
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~ 74 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG 74 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC
Confidence 4589999999999999999999999 9999999999998444
No 170
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.96 E-value=5.8e-06 Score=88.22 Aligned_cols=42 Identities=19% Similarity=0.289 Sum_probs=39.4
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
..+||+|||+|.+|+.||..|++.|++|+++|+++++||.+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 458999999999999999999999999999999999999864
No 171
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.96 E-value=4.5e-06 Score=86.44 Aligned_cols=56 Identities=7% Similarity=0.059 Sum_probs=43.9
Q ss_pred chHHHHHHHHHHH-cCcEEEeCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCC
Q 036458 232 GELPQAFARLSAV-YGGTYMLNKPECKVEFDGDGKVIGVTS-EGETAKCKKVVCDPSYL 288 (445)
Q Consensus 232 ~~L~q~l~r~~~~-~Gg~i~l~~~V~~I~~~~~g~~~~v~~-~g~~~~ad~VI~~~~~~ 288 (445)
..+.+.|.+.++. .|++++.+ .|++|..++++.+++|.. +|++++||.||.+.+..
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAK 232 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGG
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcc
Confidence 4577778888887 89999999 599998754566666664 66779999999987654
No 172
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.96 E-value=5.5e-06 Score=84.63 Aligned_cols=55 Identities=20% Similarity=0.271 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe--CCeEEEcCEEEECCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS--EGETAKCKKVVCDPSYL 288 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~--~g~~~~ad~VI~~~~~~ 288 (445)
.++.+.|.+.++..|.+++.+++| +|..+ ++++.++.. ++.++.||.||.+.+.+
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~~g~~~a~~VVlAtGg~ 175 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGKVTGFVTEKRGLVEDVDKLVLATGGY 175 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTEEEEEEETTTEEECCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCEEEEEEEEeCCCeEEeeeEEECCCCC
Confidence 467788888887789999999999 99874 677777763 34457899999986644
No 173
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.95 E-value=6.6e-06 Score=80.82 Aligned_cols=39 Identities=21% Similarity=0.096 Sum_probs=35.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcc
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGES 43 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~ 43 (445)
+||+|||+|++|+.||..|+++|++|+++|++...+...
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~ 40 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPA 40 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCcc
Confidence 699999999999999999999999999999998665544
No 174
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.95 E-value=5.9e-06 Score=86.06 Aligned_cols=56 Identities=14% Similarity=0.157 Sum_probs=45.8
Q ss_pred chHHHHHHHHHHHc-CcEEEeCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCC
Q 036458 232 GELPQAFARLSAVY-GGTYMLNKPECKVEFDGDGKVIGVTS-EGETAKCKKVVCDPSYL 288 (445)
Q Consensus 232 ~~L~q~l~r~~~~~-Gg~i~l~~~V~~I~~~~~g~~~~v~~-~g~~~~ad~VI~~~~~~ 288 (445)
..+.+.|.+.++.. |++++++ +|++|..++++.+++|.+ +|+++.||.||.+.+..
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~ 251 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFR 251 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCc
Confidence 46788888888888 9999999 999998755666667764 67789999999987654
No 175
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.94 E-value=4.4e-06 Score=87.93 Aligned_cols=56 Identities=18% Similarity=0.153 Sum_probs=44.9
Q ss_pred chHHHHHHHHHHHcC-cEEEeCCcceeEEEcCCCcEEEEE----eCCe--EEEcCEEEECCCCC
Q 036458 232 GELPQAFARLSAVYG-GTYMLNKPECKVEFDGDGKVIGVT----SEGE--TAKCKKVVCDPSYL 288 (445)
Q Consensus 232 ~~L~q~l~r~~~~~G-g~i~l~~~V~~I~~~~~g~~~~v~----~~g~--~~~ad~VI~~~~~~ 288 (445)
.+|.++|.+.+...| .++++++.|++|..+ ++++.+|. .+|+ ++.|+.||.+.+-+
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 367888888888888 999999999999984 67777764 2566 68999999876643
No 176
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.91 E-value=7e-06 Score=85.39 Aligned_cols=37 Identities=35% Similarity=0.481 Sum_probs=34.7
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCC
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYY 39 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~ 39 (445)
.+||+||||+|.+|+++|.+|+++|++|++||+....
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 5799999999999999999999999999999998754
No 177
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.89 E-value=7.5e-06 Score=85.55 Aligned_cols=35 Identities=23% Similarity=0.395 Sum_probs=32.7
Q ss_pred CcccEEEECCChhHHHHHHHhhhC-CCeEEEEecCC
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVD-GLKVLHMDRNA 37 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~-G~~VlvlE~n~ 37 (445)
++||+||||||.+||++|.+|++. |.+|+|||+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 579999999999999999999975 89999999987
No 178
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.89 E-value=7.1e-06 Score=87.08 Aligned_cols=55 Identities=13% Similarity=0.086 Sum_probs=42.8
Q ss_pred chHHHHHHHHHHHc--CcEEEeCCcceeEEEcCC--CcEEEEEe----CCe--EEEcCEEEECCC
Q 036458 232 GELPQAFARLSAVY--GGTYMLNKPECKVEFDGD--GKVIGVTS----EGE--TAKCKKVVCDPS 286 (445)
Q Consensus 232 ~~L~q~l~r~~~~~--Gg~i~l~~~V~~I~~~~~--g~~~~v~~----~g~--~~~ad~VI~~~~ 286 (445)
.++.++|.+.+... |.+++.++.|.+|..+++ |++.||.. +|+ .+.|+.||.+.+
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATG 230 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACG 230 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCC
Confidence 36778888888777 999999999999998533 38888852 443 689999998764
No 179
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.86 E-value=9.7e-06 Score=85.99 Aligned_cols=54 Identities=17% Similarity=0.109 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHc-Cc-EEEeCCcceeEEEcCCC---cEEEEEe----CCe--EEEcCEEEECCCC
Q 036458 233 ELPQAFARLSAVY-GG-TYMLNKPECKVEFDGDG---KVIGVTS----EGE--TAKCKKVVCDPSY 287 (445)
Q Consensus 233 ~L~q~l~r~~~~~-Gg-~i~l~~~V~~I~~~~~g---~~~~v~~----~g~--~~~ad~VI~~~~~ 287 (445)
.+.+.+.+.++.. |+ +++.+++|++|..+ ++ ++.||.. +|+ ++.|+.||.+.+-
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~-~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG 216 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKD-NNDPNAVAGAVGFSVREPKFYVFKAKAVILATGG 216 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEEC-TTCTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEc-CCccceeEEEEEEEecCCcEEEEEcCEEEECCCc
Confidence 4667777777777 99 99999999999985 55 8888752 454 6899999987653
No 180
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.85 E-value=7.7e-06 Score=86.02 Aligned_cols=41 Identities=29% Similarity=0.345 Sum_probs=36.3
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecC-C-------CCCCcc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRN-A-------YYGGES 43 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n-~-------~~GG~~ 43 (445)
..|||+|||+|.+|++||..|++.|++|+++|+. + .+||.|
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~ 154 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTC 154 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHH
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceE
Confidence 4689999999999999999999999999999983 3 478864
No 181
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.84 E-value=1e-05 Score=90.25 Aligned_cols=40 Identities=23% Similarity=0.403 Sum_probs=38.0
Q ss_pred cccEEEECCChhHHHHHHHhhhCCC-eEEEEecCCCCCCcc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNAYYGGES 43 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~~~GG~~ 43 (445)
.+||+|||+|.+||+||..|++.|+ +|+++|+++++||.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 5799999999999999999999999 799999999999975
No 182
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.84 E-value=1.1e-05 Score=83.53 Aligned_cols=40 Identities=23% Similarity=0.471 Sum_probs=36.7
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
..+||+|||||++|++||..|++.|++|+++|+ ++||.+.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~ 250 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVL 250 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGT
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccc
Confidence 468999999999999999999999999999986 5888875
No 183
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.84 E-value=1.3e-05 Score=80.78 Aligned_cols=59 Identities=17% Similarity=0.278 Sum_probs=47.1
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEc-CCCcEEEEE-eCCeEEEcCEEEECCCCCCc
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFD-GDGKVIGVT-SEGETAKCKKVVCDPSYLPD 290 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~-~~g~~~~v~-~~g~~~~ad~VI~~~~~~p~ 290 (445)
.++.+.+.+.++..|.+++++++|++|..+ +++++..|. .+|+++.||.||.+.+..|.
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPN 251 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcC
Confidence 467778888888999999999999999761 256666666 47889999999999886653
No 184
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.81 E-value=7.7e-06 Score=84.25 Aligned_cols=56 Identities=14% Similarity=0.146 Sum_probs=45.4
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS-EGETAKCKKVVCDPSYL 288 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~-~g~~~~ad~VI~~~~~~ 288 (445)
..+.+.|.+.+...|++++.+ +|++|..++++.+++|++ +|++++||.||.+.+..
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 229 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFR 229 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcc
Confidence 467788888888889999999 999998855666667764 67789999999987654
No 185
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.81 E-value=9e-06 Score=82.63 Aligned_cols=41 Identities=15% Similarity=0.155 Sum_probs=38.3
Q ss_pred cccEEEECCChhHHHHHHHhhh-C------CCeEEEEecCCCCCCccc
Q 036458 4 DYDVIVLGTGLKECILSGVLSV-D------GLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~-~------G~~VlvlE~n~~~GG~~~ 44 (445)
.+||+|||+|++|+.||..|++ . |++|+++|+++++||.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 5899999999999999999999 7 999999999999999763
No 186
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.77 E-value=1.5e-05 Score=84.92 Aligned_cols=36 Identities=31% Similarity=0.402 Sum_probs=34.0
Q ss_pred cccEEEECCChhHHHHHHHhhh-----CCCeEEEEecCCCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSV-----DGLKVLHMDRNAYY 39 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~-----~G~~VlvlE~n~~~ 39 (445)
++||+|||||++||++|..|++ .|.+|+|+||++.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 6899999999999999999999 99999999998764
No 187
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.77 E-value=1.6e-05 Score=78.80 Aligned_cols=57 Identities=18% Similarity=0.177 Sum_probs=45.1
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEE-eCCeEEEcCEEEECCCCCCc
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVT-SEGETAKCKKVVCDPSYLPD 290 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~-~~g~~~~ad~VI~~~~~~p~ 290 (445)
.++.+.+.+.++..|.+++++++|++|..+ ++.+ .+. .+|+++.||.||.+.+..|.
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~~g~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKA-GEGL-EAHLSDGEVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEec-CCEE-EEEECCCCEEECCEEEECcCCCcC
Confidence 356788888888899999999999999874 4433 344 57889999999999886653
No 188
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.77 E-value=1.4e-05 Score=81.36 Aligned_cols=42 Identities=14% Similarity=0.057 Sum_probs=38.4
Q ss_pred CcccEEEECCChhHHHHHHHhhhCC--CeEEEEecCCCCCCccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDG--LKVLHMDRNAYYGGEST 44 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G--~~VlvlE~n~~~GG~~~ 44 (445)
..+||+|||+|++|+.+|..|++.| ++|+++|+++++||++.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 4689999999999999999999999 99999999999998763
No 189
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.75 E-value=1.7e-05 Score=80.26 Aligned_cols=54 Identities=17% Similarity=0.172 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 233 ~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
++.+.+.+.++.. .++++++.|.+|..+ + ++..+..+|+++.||.||.+.+..|
T Consensus 191 ~~~~~l~~~l~~~-v~i~~~~~v~~i~~~-~-~v~~v~~~g~~i~~D~Vv~a~G~~p 244 (449)
T 3kd9_A 191 EVTDILEEKLKKH-VNLRLQEITMKIEGE-E-RVEKVVTDAGEYKAELVILATGIKP 244 (449)
T ss_dssp HHHHHHHHHHTTT-SEEEESCCEEEEECS-S-SCCEEEETTEEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHhC-cEEEeCCeEEEEecc-C-cEEEEEeCCCEEECCEEEEeeCCcc
Confidence 5667777777777 999999999999753 3 4555667889999999999987665
No 190
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.70 E-value=1.8e-05 Score=79.59 Aligned_cols=39 Identities=23% Similarity=0.349 Sum_probs=36.5
Q ss_pred ccEEEECCChhHHHHHHHhhh--CCCeEEEEecCCCCCCcc
Q 036458 5 YDVIVLGTGLKECILSGVLSV--DGLKVLHMDRNAYYGGES 43 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~--~G~~VlvlE~n~~~GG~~ 43 (445)
+||+|||||++|+++|..|++ .|++|+|+|+++++|+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~ 43 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP 43 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC
Confidence 689999999999999999999 899999999999988754
No 191
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.68 E-value=2.6e-05 Score=80.28 Aligned_cols=38 Identities=13% Similarity=0.291 Sum_probs=35.2
Q ss_pred CCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCC
Q 036458 2 DEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYY 39 (445)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~ 39 (445)
..+||+||||+|.+|+++|.+|++.|++|+++|+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 45799999999999999999999999999999998754
No 192
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.68 E-value=2.7e-05 Score=80.10 Aligned_cols=38 Identities=18% Similarity=0.336 Sum_probs=35.7
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
.+||+||||+|.+|+++|.+|++.|++|+++|+..+.+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 46999999999999999999999999999999998765
No 193
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.67 E-value=2.9e-05 Score=79.67 Aligned_cols=56 Identities=18% Similarity=0.163 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEE-eCCeEEEcCEEEECCCCCCc
Q 036458 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVT-SEGETAKCKKVVCDPSYLPD 290 (445)
Q Consensus 233 ~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~-~~g~~~~ad~VI~~~~~~p~ 290 (445)
++.+.+.+.++..|.++++++.|++|..+ ++++ .|. .+|+++.||.||++.+..|.
T Consensus 227 ~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 227 YLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGKL-LIKLKDGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCeE-EEEECCCCEEECCEEEECCCCCcc
Confidence 56777888888999999999999999863 4444 454 57889999999999876653
No 194
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.66 E-value=2e-05 Score=82.16 Aligned_cols=38 Identities=21% Similarity=0.392 Sum_probs=35.1
Q ss_pred cccEEEECCChhHHHHHHHhhh-CCCeEEEEecCCCCCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSV-DGLKVLHMDRNAYYGG 41 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE~n~~~GG 41 (445)
+||+||||+|.+||++|.+|++ .|.+|+|||+.+..++
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~ 40 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDEN 40 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTT
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccC
Confidence 5999999999999999999998 7999999999987744
No 195
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.66 E-value=2.8e-05 Score=78.77 Aligned_cols=58 Identities=19% Similarity=0.189 Sum_probs=48.0
Q ss_pred cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 231 ~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
-.++.+.+.+.++..|.+++++++|++|.. +++++..+..+|+++.||.||++.+..|
T Consensus 190 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~~v~~~g~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 190 DKEFTDILAKDYEAHGVNLVLGSKVAAFEE-VDDEIITKTLDGKEIKSDIAILCIGFRP 247 (452)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESSCEEEEEE-ETTEEEEEETTSCEEEESEEEECCCEEE
T ss_pred hhhHHHHHHHHHHHCCCEEEcCCeeEEEEc-CCCeEEEEEeCCCEEECCEEEECcCCCC
Confidence 346778888888999999999999999986 3566666777888999999999987655
No 196
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.66 E-value=2.3e-05 Score=79.10 Aligned_cols=40 Identities=23% Similarity=0.351 Sum_probs=37.0
Q ss_pred CCCcccEEEECCChhHHHHHHHhhh---CCCeEEEEecCCCCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSV---DGLKVLHMDRNAYYG 40 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~---~G~~VlvlE~n~~~G 40 (445)
|....||+|||||++|+++|..|++ .|++|+++|+++++.
T Consensus 1 M~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~ 43 (437)
T 3sx6_A 1 MRGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQ 43 (437)
T ss_dssp CTTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEE
T ss_pred CCCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCc
Confidence 7777899999999999999999999 899999999999753
No 197
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.64 E-value=3.4e-05 Score=77.16 Aligned_cols=53 Identities=23% Similarity=0.256 Sum_probs=42.7
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEE-eCCeEEEcCEEEECCCCCCc
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVT-SEGETAKCKKVVCDPSYLPD 290 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~-~~g~~~~ad~VI~~~~~~p~ 290 (445)
.++.+.+.+.++..|.+++++++|++|. + + .|. .+|+++.||.||.+.+..|.
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEETTSCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEECCCCEEEcCEEEECcCCCcc
Confidence 3567778888889999999999999997 3 3 344 57889999999999887653
No 198
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.60 E-value=2.5e-05 Score=77.92 Aligned_cols=54 Identities=17% Similarity=0.118 Sum_probs=42.7
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCCc
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPD 290 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p~ 290 (445)
.++.+.+.+.++..|.+++++++|++|.. ++ .+..+|+++.||.||.++++.|.
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~~---v~~~~g~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--HE---IVDEKGNTIPADITILLPPYTGN 271 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--SE---EEETTSCEEECSEEEEECCEECC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--Ce---EEECCCCEEeeeEEEECCCCCcc
Confidence 36777888888899999999999999853 22 23457889999999999876653
No 199
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.59 E-value=4.2e-05 Score=79.46 Aligned_cols=39 Identities=26% Similarity=0.403 Sum_probs=35.8
Q ss_pred CcccEEEECCChhHHHHHHHhhhC-CCeEEEEecCCCCCC
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVD-GLKVLHMDRNAYYGG 41 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~-G~~VlvlE~n~~~GG 41 (445)
..||+||||+|.+|+++|.+|+++ |++|++||+.....+
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~ 51 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRG 51 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCC
Confidence 469999999999999999999998 899999999987654
No 200
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.57 E-value=4.5e-05 Score=80.00 Aligned_cols=55 Identities=7% Similarity=-0.029 Sum_probs=42.9
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
.++.+.+.+.++..|.+++++++|++|..+ ++. ....+|+++.||.||++.+..|
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~--v~~~~g~~i~~D~Vi~a~G~~p 282 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN-GAV--VRLKSGSVIQTDMLILAIGVQP 282 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG-GTE--EEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC-CCE--EEECCCCEEEcCEEEEccCCCC
Confidence 467788888889999999999999999753 332 1235788999999999877654
No 201
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.56 E-value=4.6e-05 Score=77.01 Aligned_cols=56 Identities=18% Similarity=0.149 Sum_probs=44.8
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
.++.+.+.+.++..|.+++++++|++|.. ++++..+..+|+++.||.||.+.+..|
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~~v~~v~~~~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEG--DGRVQKVVTDKNAYDADLVVVAVGVRP 246 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEEC--SSBCCEEEESSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEc--cCcEEEEEECCCEEECCEEEECcCCCC
Confidence 35777888888889999999999999975 244545666778899999999887654
No 202
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.53 E-value=4.6e-05 Score=78.04 Aligned_cols=57 Identities=16% Similarity=0.206 Sum_probs=45.7
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCCc
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLPD 290 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p~ 290 (445)
.++.+.+.+.++..|.++++++.|++|.. ++++..+..+|+++.||.||.+.+..|.
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIITDKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEESSCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEECCcEEECCEEEECCCCCcC
Confidence 45777788888889999999999999974 4455556668889999999999876553
No 203
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.51 E-value=7.4e-05 Score=74.67 Aligned_cols=57 Identities=14% Similarity=0.082 Sum_probs=45.5
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEE-eCCeEEEcCEEEECCCCCCc
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVT-SEGETAKCKKVVCDPSYLPD 290 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~-~~g~~~~ad~VI~~~~~~p~ 290 (445)
.++.+.+.+.++..|.++++++.|++|.. ++++.+|. .+|+++.||.||++.+..|.
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVMASDGRSFVADSALICVGAEPA 242 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEETTSCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEECCCCEEEcCEEEEeeCCeec
Confidence 35667777888889999999999999975 33455565 48889999999999887654
No 204
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.51 E-value=5.7e-05 Score=77.14 Aligned_cols=56 Identities=14% Similarity=0.118 Sum_probs=45.9
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
.++.+.+.+.++..|.+++++++|++|.. ++++..+..++.++.||.||.+.+..|
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~v~~v~~~~~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKG--NERVEAVETDKGTYKADLVLVSVGVKP 282 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE--SSBEEEEEETTEEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEc--CCcEEEEEECCCEEEcCEEEECcCCCc
Confidence 35777888888899999999999999976 345666777778899999999987654
No 205
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.50 E-value=6.5e-05 Score=78.73 Aligned_cols=38 Identities=29% Similarity=0.511 Sum_probs=34.8
Q ss_pred CcccEEEECCChhHHHHHHHhhh-CCCeEEEEecCCCCC
Q 036458 3 EDYDVIVLGTGLKECILSGVLSV-DGLKVLHMDRNAYYG 40 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE~n~~~G 40 (445)
.+||+||||+|.+|+++|.+|++ .|++|++||+....-
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~ 61 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYES 61 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCT
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccC
Confidence 46999999999999999999999 899999999987653
No 206
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.46 E-value=8.1e-05 Score=73.27 Aligned_cols=35 Identities=23% Similarity=0.225 Sum_probs=32.8
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
-||+|||+|.+|++||..|++.| +|+++|++++.+
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~ 43 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY 43 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc
Confidence 58999999999999999999999 999999998754
No 207
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.38 E-value=9.5e-05 Score=76.98 Aligned_cols=58 Identities=16% Similarity=0.119 Sum_probs=45.4
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEc------------------CCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFD------------------GDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~------------------~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
.++.+.+.+.++..|.++++++.|++|..+ +++++..+..+|+++.||.||.+.++.|
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 267 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRP 267 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCcc
Confidence 456777778888899999999999999862 2455544456788999999999887654
No 208
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.24 E-value=0.00024 Score=70.37 Aligned_cols=39 Identities=10% Similarity=0.139 Sum_probs=35.9
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
+..+|+|||+|++|++||..|.+.|.+|+++|++++++.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y 46 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY 46 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc
Confidence 357899999999999999999888999999999999874
No 209
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.22 E-value=0.00019 Score=73.74 Aligned_cols=35 Identities=17% Similarity=0.321 Sum_probs=33.1
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
+..|||||+|.+|+.+|..|++.|++|+++|+++|
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 46799999999999999999999999999999986
No 210
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.16 E-value=0.0002 Score=70.97 Aligned_cols=39 Identities=18% Similarity=0.211 Sum_probs=33.9
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC--eEEEEecCCCCCCcc
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL--KVLHMDRNAYYGGES 43 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~~~GG~~ 43 (445)
.+|||||+|.+|++||..|++.|+ +|+++|+++++..+.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p 43 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCY 43 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECST
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCcc
Confidence 479999999999999999998874 899999999865544
No 211
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.10 E-value=0.00032 Score=70.65 Aligned_cols=53 Identities=11% Similarity=0.066 Sum_probs=41.4
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~~p 289 (445)
.++.+.+.+.++..|.++++++.|+++.. .. .+..+|+++.||.||.+.+..|
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~~---~~--v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAING---NE--ITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEET---TE--EEETTSCEEECSEEEECCCEEE
T ss_pred chhHHHHHHHhhccceEEEeccEEEEecC---Ce--eeecCCeEEeeeeEEEEeceec
Confidence 45667778888899999999999998742 22 2346889999999999877554
No 212
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.07 E-value=0.00031 Score=70.62 Aligned_cols=37 Identities=24% Similarity=0.356 Sum_probs=32.4
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCC--CeEEEEecCCCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDG--LKVLHMDRNAYY 39 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G--~~VlvlE~n~~~ 39 (445)
|.+ +|||||||.+|++||..|++.+ .+|+++|++++.
T Consensus 1 M~K--~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~ 39 (430)
T 3hyw_A 1 MAK--HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp -CC--EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCC--cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCC
Confidence 554 6999999999999999999876 799999999874
No 213
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.06 E-value=9e-05 Score=76.14 Aligned_cols=39 Identities=15% Similarity=0.042 Sum_probs=27.4
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
+-|||||||+|++||++|++|.++|...+++|+.+..|+
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~ 76 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQ 76 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CC
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCC
Confidence 458999999999999999999987654444444444444
No 214
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.08 E-value=0.0059 Score=61.39 Aligned_cols=40 Identities=25% Similarity=0.228 Sum_probs=36.3
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
...+++|||+|..|+.+|..|++.|.+|+++|+++++..+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 187 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV 187 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc
Confidence 3578999999999999999999999999999999987653
No 215
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.98 E-value=0.0052 Score=60.66 Aligned_cols=38 Identities=13% Similarity=0.022 Sum_probs=35.5
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
.+|+|||+|..|+-+|..|++.|.+|+++|+++++..+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 184 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER 184 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 47999999999999999999999999999999988765
No 216
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.79 E-value=0.0075 Score=57.22 Aligned_cols=37 Identities=19% Similarity=0.102 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~ 182 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRA 182 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCc
Confidence 3699999999999999999999999999999988643
No 217
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.78 E-value=0.0094 Score=49.05 Aligned_cols=33 Identities=24% Similarity=0.359 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|+|+|+|..|..+|..|++.|++|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 218
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.65 E-value=0.012 Score=50.00 Aligned_cols=34 Identities=24% Similarity=0.512 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
..|+|+|+|..|+.+|..|++.|++|+++|++..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4699999999999999999999999999999753
No 219
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.64 E-value=0.011 Score=49.21 Aligned_cols=33 Identities=12% Similarity=0.290 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
-.|+|+|.|--|..+|..|.+.|++|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 469999999999999999999999999999985
No 220
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.58 E-value=0.013 Score=48.65 Aligned_cols=33 Identities=33% Similarity=0.498 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..++|+|+|--|..+|..|+++|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999974
No 221
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.55 E-value=0.012 Score=57.71 Aligned_cols=39 Identities=23% Similarity=0.290 Sum_probs=35.6
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
..+++|||+|..|+-+|..|++.|.+|+++|+++++...
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~ 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc
Confidence 357999999999999999999999999999999987654
No 222
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.53 E-value=0.0094 Score=60.19 Aligned_cols=37 Identities=16% Similarity=0.089 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 208 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP 208 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999998765
No 223
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.46 E-value=0.012 Score=59.41 Aligned_cols=37 Identities=19% Similarity=0.111 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-+|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 206 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP 206 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999988754
No 224
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.44 E-value=0.012 Score=57.67 Aligned_cols=37 Identities=30% Similarity=0.471 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
.+++|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc
Confidence 4799999999999999999999999999999998765
No 225
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.44 E-value=0.013 Score=59.01 Aligned_cols=37 Identities=19% Similarity=0.168 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
.+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 207 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS 207 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 5799999999999999999999999999999988754
No 226
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=95.40 E-value=0.014 Score=59.13 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=35.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 221 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc
Confidence 47999999999999999999999999999999988763
No 227
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.35 E-value=0.013 Score=58.95 Aligned_cols=37 Identities=22% Similarity=0.151 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-+|+|||+|..|+.+|..|++.|.+|+++|+++++..
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~ 204 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP 204 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc
Confidence 4699999999999999999999999999999988643
No 228
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.26 E-value=0.017 Score=54.26 Aligned_cols=38 Identities=29% Similarity=0.297 Sum_probs=33.7
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
|.+...|.|||+|.-|...|..|+++|++|+++|++..
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 44445799999999999999999999999999999863
No 229
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.21 E-value=0.015 Score=54.85 Aligned_cols=35 Identities=23% Similarity=0.230 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYY 39 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~ 39 (445)
..|+|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 47999999999999999999999999999987654
No 230
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.16 E-value=0.02 Score=56.87 Aligned_cols=39 Identities=13% Similarity=0.240 Sum_probs=35.5
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
...|+|||+|..|+-+|..|++.|.+|+++|+.+++..+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 183 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR 183 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 357999999999999999999999999999999987654
No 231
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.15 E-value=0.013 Score=56.14 Aligned_cols=34 Identities=24% Similarity=0.365 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
-.|.|||+|.-|...|..++++|++|+++|.++.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3699999999999999999999999999998753
No 232
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.12 E-value=0.024 Score=47.85 Aligned_cols=33 Identities=18% Similarity=0.080 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
-.++|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 479999999999999999999999999999973
No 233
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.10 E-value=0.021 Score=45.27 Aligned_cols=33 Identities=18% Similarity=0.399 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCC-CeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDG-LKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~n~ 37 (445)
..|+|+|+|..|..++..|.+.| ++|.+++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 46999999999999999999999 9999999874
No 234
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.08 E-value=0.018 Score=57.94 Aligned_cols=37 Identities=24% Similarity=0.151 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 204 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP 204 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh
Confidence 4799999999999999999999999999999988654
No 235
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.83 E-value=0.027 Score=53.44 Aligned_cols=32 Identities=28% Similarity=0.439 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999874
No 236
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=94.78 E-value=0.024 Score=57.24 Aligned_cols=37 Identities=22% Similarity=0.174 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~ 203 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF 203 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc
Confidence 4699999999999999999999999999999988653
No 237
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=94.69 E-value=0.019 Score=58.25 Aligned_cols=38 Identities=26% Similarity=0.294 Sum_probs=35.1
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
..+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 223 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT 223 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh
Confidence 45799999999999999999999999999999988765
No 238
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.67 E-value=0.025 Score=53.48 Aligned_cols=38 Identities=13% Similarity=-0.016 Sum_probs=32.7
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
|.....|.|||+|.-|...|..|+++|++|+++|++..
T Consensus 12 M~~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 12 TTEQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp ---CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 33346899999999999999999999999999999875
No 239
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.65 E-value=0.028 Score=57.14 Aligned_cols=37 Identities=22% Similarity=0.219 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 231 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA 231 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh
Confidence 4699999999999999999999999999999988654
No 240
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=94.59 E-value=0.03 Score=56.59 Aligned_cols=37 Identities=24% Similarity=0.327 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 215 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG 215 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC
Confidence 4699999999999999999999999999999998765
No 241
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=94.56 E-value=0.033 Score=55.69 Aligned_cols=39 Identities=18% Similarity=0.200 Sum_probs=35.0
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
.-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~ 187 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER 187 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 347999999999999999999999999999999887543
No 242
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=94.52 E-value=0.03 Score=56.42 Aligned_cols=37 Identities=19% Similarity=0.107 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 208 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999988754
No 243
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.52 E-value=0.028 Score=48.92 Aligned_cols=33 Identities=21% Similarity=0.207 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHhhhC-CCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVD-GLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~-G~~VlvlE~n~ 37 (445)
-.|+|+|+|..|..+|..|.+. |++|+++|++.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 3699999999999999999999 99999999975
No 244
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=94.52 E-value=0.025 Score=57.34 Aligned_cols=37 Identities=14% Similarity=0.120 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~ 222 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ 222 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc
Confidence 4799999999999999999999999999999988654
No 245
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=94.49 E-value=0.034 Score=56.62 Aligned_cols=38 Identities=26% Similarity=0.235 Sum_probs=35.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 212 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL 212 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc
Confidence 46999999999999999999999999999999987644
No 246
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.48 E-value=0.031 Score=53.46 Aligned_cols=37 Identities=24% Similarity=0.329 Sum_probs=34.3
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCC-eEEEEecCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNA 37 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~ 37 (445)
|.....|.|||+|..|...|..|+++|+ +|+++|++.
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 7767789999999999999999999998 999999985
No 247
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.45 E-value=0.032 Score=45.95 Aligned_cols=33 Identities=27% Similarity=0.243 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|+|+|+|-.|..+|..|.+.|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999874
No 248
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.35 E-value=0.036 Score=52.21 Aligned_cols=36 Identities=25% Similarity=0.152 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
..|+|||+|..|+-+|..|++.|.+|+++++++++.
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 179 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR 179 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC
Confidence 479999999999999999999999999999998874
No 249
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=94.31 E-value=0.042 Score=55.11 Aligned_cols=38 Identities=16% Similarity=0.243 Sum_probs=35.1
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
.+|+|||+|..|+-+|..|++.|.+|+++++.+++...
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 186 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR 186 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 47999999999999999999999999999999987654
No 250
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.29 E-value=0.035 Score=53.69 Aligned_cols=37 Identities=32% Similarity=0.365 Sum_probs=31.6
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
|.+...|.|||+|..|...|..|+++|++|++++++.
T Consensus 1 mm~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 1 MIESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4445689999999999999999999999999999863
No 251
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=94.26 E-value=0.033 Score=53.85 Aligned_cols=36 Identities=11% Similarity=0.049 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
..|+|||+|.+|+-+|..|++.|.+|+++++++.+.
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~ 202 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLN 202 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCC
Confidence 369999999999999999999999999999987654
No 252
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.25 E-value=0.035 Score=53.24 Aligned_cols=34 Identities=24% Similarity=0.365 Sum_probs=31.5
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
..|.|||+|.-|...|..|+++|++|+++|+++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4699999999999999999999999999998853
No 253
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.25 E-value=0.047 Score=54.11 Aligned_cols=39 Identities=18% Similarity=0.252 Sum_probs=35.2
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
...|+|||+|..|+-+|..|++.|.+|+++|+.+++-.+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 181 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR 181 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh
Confidence 357999999999999999999999999999999887543
No 254
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.21 E-value=0.04 Score=52.73 Aligned_cols=33 Identities=24% Similarity=0.422 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|--|.+.|..|+++|++|++++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 469999999999999999999999999999976
No 255
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=94.19 E-value=0.038 Score=57.00 Aligned_cols=34 Identities=21% Similarity=0.110 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
..|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 4799999999999999999999999999999876
No 256
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.15 E-value=0.04 Score=55.86 Aligned_cols=37 Identities=24% Similarity=0.211 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 222 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR 222 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc
Confidence 4699999999999999999999999999999988653
No 257
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.15 E-value=0.026 Score=56.92 Aligned_cols=37 Identities=16% Similarity=0.151 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~ 214 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP 214 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 4799999999999999999999999999999988754
No 258
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.13 E-value=0.04 Score=56.20 Aligned_cols=37 Identities=16% Similarity=0.179 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR 213 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc
Confidence 4699999999999999999999999999999988754
No 259
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.12 E-value=0.04 Score=51.86 Aligned_cols=36 Identities=17% Similarity=-0.038 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
-.|+|||+|..|+-+|..|++.|.+|+++++.+++.
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 180 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK 180 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC
Confidence 469999999999999999999999999999998873
No 260
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.05 E-value=0.037 Score=49.62 Aligned_cols=32 Identities=16% Similarity=0.297 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.|+|+|+|--|..+|..|.++|++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999874
No 261
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.01 E-value=0.041 Score=52.42 Aligned_cols=33 Identities=18% Similarity=0.294 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.+|.|||+|--|.+.|..|+++|++|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 469999999999999999999999999999975
No 262
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=94.01 E-value=0.04 Score=55.21 Aligned_cols=37 Identities=22% Similarity=0.224 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
..++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~ 184 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK 184 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeeccccc
Confidence 4799999999999999999999999999999988653
No 263
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.98 E-value=0.053 Score=48.46 Aligned_cols=34 Identities=12% Similarity=0.236 Sum_probs=31.8
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
..|.|||+|.-|.+.|..|+++|++|++++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4699999999999999999999999999999876
No 264
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.92 E-value=0.048 Score=50.95 Aligned_cols=33 Identities=24% Similarity=0.217 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
.|.|||+|.-|...|..|+++|++|++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 589999999999999999999999999998864
No 265
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=93.91 E-value=0.048 Score=51.90 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~ 195 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR 195 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC
Confidence 479999999999999999999999999999998863
No 266
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=93.91 E-value=0.043 Score=56.69 Aligned_cols=35 Identities=17% Similarity=0.242 Sum_probs=32.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYY 39 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~ 39 (445)
..|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 46999999999999999999999999999998764
No 267
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.90 E-value=0.052 Score=51.56 Aligned_cols=36 Identities=19% Similarity=0.114 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
..|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 188 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR 188 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC
Confidence 469999999999999999999999999999998764
No 268
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=93.88 E-value=0.049 Score=54.90 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 211 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP 211 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc
Confidence 4699999999999999999999999999999988754
No 269
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=93.85 E-value=0.049 Score=54.90 Aligned_cols=37 Identities=22% Similarity=0.256 Sum_probs=33.9
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR 213 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC
Confidence 4699999999999999999999999999999987644
No 270
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.81 E-value=0.048 Score=55.33 Aligned_cols=33 Identities=18% Similarity=0.361 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|.-|+..|..|+++|++|+++|++.
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 579999999999999999999999999999874
No 271
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=93.80 E-value=0.051 Score=51.32 Aligned_cols=36 Identities=22% Similarity=0.132 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
..|+|||+|..|+-+|..|++.|.+|+++++.+.+.
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 181 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc
Confidence 469999999999999999999999999999988763
No 272
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=93.80 E-value=0.051 Score=51.92 Aligned_cols=36 Identities=19% Similarity=0.179 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
..|+|||+|..|+-+|..|++.|.+|+++++++++.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~ 191 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR 191 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC
Confidence 479999999999999999999999999999998763
No 273
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=93.78 E-value=0.059 Score=53.17 Aligned_cols=39 Identities=18% Similarity=0.235 Sum_probs=35.3
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcc
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGES 43 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~ 43 (445)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..+.
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~ 181 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV 181 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc
Confidence 469999999999999999999999999999998876543
No 274
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.74 E-value=0.064 Score=53.12 Aligned_cols=39 Identities=18% Similarity=0.194 Sum_probs=35.4
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
.-.|+|||+|..|+-+|..|++.|.+|+++|+.+++-.+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~ 190 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR 190 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh
Confidence 357999999999999999999999999999999987554
No 275
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=93.73 E-value=0.042 Score=56.81 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=32.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYY 39 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~ 39 (445)
..|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 46999999999999999999999999999998764
No 276
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=93.73 E-value=0.05 Score=54.93 Aligned_cols=37 Identities=16% Similarity=0.045 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-.|+|||+|.+|+-+|..|++.|.+|+++++++.+-+
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~ 234 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMG 234 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCC
Confidence 4699999999999999999999999999999877533
No 277
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.72 E-value=0.052 Score=54.59 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|.-|+..|..|+++|++|+++|++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 469999999999999999999999999999985
No 278
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=93.67 E-value=0.059 Score=51.29 Aligned_cols=37 Identities=14% Similarity=0.163 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-.|+|||+|..|+-+|..|++.|.+|+++++.+.+..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~ 189 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc
Confidence 4699999999999999999999999999999987644
No 279
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.67 E-value=0.058 Score=54.29 Aligned_cols=34 Identities=24% Similarity=0.220 Sum_probs=31.8
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
..|.|||.|.+|+++|..|.+.|++|++.|+++.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~ 43 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF 43 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 4799999999999999999999999999999864
No 280
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.65 E-value=0.049 Score=55.13 Aligned_cols=35 Identities=26% Similarity=0.235 Sum_probs=32.7
Q ss_pred cccEEEECCChhHHHHHHHhhhC-CC-eEEEEecCCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVD-GL-KVLHMDRNAY 38 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~-G~-~VlvlE~n~~ 38 (445)
...|.|||+|.-|+..|..|+++ |+ +|+++|++..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 35799999999999999999999 99 9999999976
No 281
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.63 E-value=0.067 Score=51.30 Aligned_cols=37 Identities=16% Similarity=0.386 Sum_probs=33.0
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCC-eEEEEecCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNA 37 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~ 37 (445)
|....+|.|||+|-.|..+|..|+..|+ +|.++|.+.
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 6556789999999999999999999998 999999875
No 282
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.59 E-value=0.054 Score=52.13 Aligned_cols=36 Identities=22% Similarity=0.315 Sum_probs=31.7
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
|. ...|.|||+|--|++.|..|+++|++|+++++++
T Consensus 1 M~-~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~ 36 (335)
T 3ghy_A 1 MS-LTRICIVGAGAVGGYLGARLALAGEAINVLARGA 36 (335)
T ss_dssp -C-CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCHH
T ss_pred CC-CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEChH
Confidence 54 3579999999999999999999999999999853
No 283
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.50 E-value=0.071 Score=50.70 Aligned_cols=34 Identities=29% Similarity=0.308 Sum_probs=31.8
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
..|.|||+|.-|...|..|+++|++|+++|++..
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5799999999999999999999999999999864
No 284
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.49 E-value=0.056 Score=54.11 Aligned_cols=35 Identities=14% Similarity=-0.014 Sum_probs=32.7
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCe-EEEEecCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLK-VLHMDRNAYY 39 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~-VlvlE~n~~~ 39 (445)
.+|+|||+|.+|+-+|..|++.|.+ |+++++++.+
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 4799999999999999999999999 9999998765
No 285
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.46 E-value=0.066 Score=55.31 Aligned_cols=37 Identities=16% Similarity=0.106 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-+|+|||+|..|+-+|..|++.|.+|+++++.+++..
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 188 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT 188 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch
Confidence 3799999999999999999999999999999987654
No 286
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=93.43 E-value=0.064 Score=50.54 Aligned_cols=37 Identities=19% Similarity=0.238 Sum_probs=31.8
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
|.....|.|||+|.-|...|..|++.|++|++++++.
T Consensus 1 M~~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp ---CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 6666789999999999999999999999999999874
No 287
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.33 E-value=0.068 Score=52.04 Aligned_cols=37 Identities=16% Similarity=0.167 Sum_probs=32.0
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
|.+..+|.|||.|.-|...|..|+++|++|++++++.
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3345689999999999999999999999999999875
No 288
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.33 E-value=0.067 Score=54.28 Aligned_cols=35 Identities=29% Similarity=0.302 Sum_probs=32.0
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
...|.|||+|.-|...|..|+++|++|+++|++..
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 35799999999999999999999999999998853
No 289
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.31 E-value=0.066 Score=50.57 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|.-|...|..|+++|++|++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 369999999999999999999999999999864
No 290
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.30 E-value=0.07 Score=51.90 Aligned_cols=33 Identities=27% Similarity=0.279 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|.-|.+.|..|+++|++|+++++++
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999874
No 291
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.30 E-value=0.066 Score=50.64 Aligned_cols=36 Identities=19% Similarity=0.127 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
-.|+|||+|..|+-+|..|++.|.+|+++++.+++.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~ 191 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM 191 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC
Confidence 469999999999999999999999999999988764
No 292
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=93.30 E-value=0.08 Score=53.34 Aligned_cols=38 Identities=11% Similarity=0.189 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
-.|+|||+|..|+-+|..|++.|.+|+++++.+++...
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 210 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALIT 210 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCC
Confidence 46999999999999999999999999999999887654
No 293
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=93.29 E-value=0.082 Score=53.00 Aligned_cols=38 Identities=16% Similarity=-0.007 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
-.++|||+|..|+-+|..|++.|.+|+++++.+++...
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 185 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK 185 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc
Confidence 46999999999999999999999999999999887543
No 294
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=93.28 E-value=0.067 Score=54.29 Aligned_cols=37 Identities=27% Similarity=0.223 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 235 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG 235 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc
Confidence 4699999999999999999999999999999988754
No 295
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.27 E-value=0.071 Score=50.37 Aligned_cols=32 Identities=22% Similarity=0.291 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|+-|...|..|+ +|++|+++|+++
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 57999999999999999999 999999999875
No 296
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.25 E-value=0.073 Score=51.25 Aligned_cols=33 Identities=18% Similarity=0.268 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC-eEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~ 37 (445)
..|+|||+|-.|.++|..|++.|+ +|.++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 479999999999999999999998 999999985
No 297
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=93.25 E-value=0.073 Score=53.81 Aligned_cols=36 Identities=25% Similarity=0.278 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
-.++|||+|..|+-+|..|++.|.+|+++++.+++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 223 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL 223 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc
Confidence 469999999999999999999999999999998865
No 298
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.17 E-value=0.059 Score=54.01 Aligned_cols=36 Identities=19% Similarity=0.243 Sum_probs=33.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
..|.|||.|.+|+++|..|++.|++|+..|.+...=
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCT
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcc
Confidence 469999999999999999999999999999987653
No 299
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.16 E-value=0.076 Score=53.27 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=31.9
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
..+.|||+|.-|+..|..|+++|++|+++|++..
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5689999999999999999999999999999875
No 300
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.13 E-value=0.07 Score=53.62 Aligned_cols=34 Identities=18% Similarity=0.316 Sum_probs=31.9
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
..|.|||+|.-|...|..|+++|++|+++|++..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 3599999999999999999999999999999876
No 301
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=93.00 E-value=0.069 Score=54.00 Aligned_cols=37 Identities=22% Similarity=0.217 Sum_probs=33.1
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhC--CCeEEEEecCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVD--GLKVLHMDRNA 37 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~n~ 37 (445)
|.+...|.|||+|.-|+..|..|+++ |++|+++|++.
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 55556899999999999999999999 89999999874
No 302
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=92.93 E-value=0.085 Score=50.02 Aligned_cols=37 Identities=24% Similarity=0.308 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
..|+|||+|..|+-+|..|++.|.+|+++++.+.+..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~ 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC
Confidence 4699999999999999999999999999999988654
No 303
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.92 E-value=0.098 Score=47.89 Aligned_cols=33 Identities=30% Similarity=0.379 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|.-|...|..|+++|++|++++++.
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 569999999999999999999999999999875
No 304
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.87 E-value=0.089 Score=50.56 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
+..+.|||+|--|+..|..|+++|++|++++++.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3579999999999999999999999999999863
No 305
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=92.85 E-value=0.095 Score=52.87 Aligned_cols=37 Identities=19% Similarity=0.157 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
..|+|||+|..|+-+|..|++.|.+|+++++.+++..
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 217 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP 217 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc
Confidence 4699999999999999999999999999999987754
No 306
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=92.85 E-value=0.089 Score=50.73 Aligned_cols=37 Identities=19% Similarity=0.206 Sum_probs=33.8
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-.|+|||+|..|+-+|..|++.|.+|+++++.+.+.+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~ 200 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG 200 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC
Confidence 3699999999999999999999999999999987654
No 307
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.83 E-value=0.077 Score=53.13 Aligned_cols=32 Identities=25% Similarity=0.504 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999874
No 308
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.82 E-value=0.08 Score=53.47 Aligned_cols=33 Identities=21% Similarity=0.241 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 359999999999999999999999999999875
No 309
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.75 E-value=0.064 Score=50.58 Aligned_cols=33 Identities=18% Similarity=0.207 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|--|.+.|..|+++|++|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 369999999999999999999999999999984
No 310
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=92.74 E-value=0.16 Score=50.91 Aligned_cols=37 Identities=19% Similarity=0.095 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHhhhC--CCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVD--GLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~n~~~GG 41 (445)
+||+|||+|++|++||..|++. |++|+++|+++++|.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 39 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISF 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCc
Confidence 5899999999999999999998 999999999998664
No 311
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.71 E-value=0.091 Score=49.23 Aligned_cols=33 Identities=18% Similarity=0.223 Sum_probs=31.1
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
.|.|||+|.-|...|..|+++|++|++++++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 589999999999999999999999999999864
No 312
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.69 E-value=0.098 Score=49.49 Aligned_cols=34 Identities=24% Similarity=0.224 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
...|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999875
No 313
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=92.68 E-value=0.07 Score=53.54 Aligned_cols=36 Identities=11% Similarity=0.073 Sum_probs=32.7
Q ss_pred cccEEEECCChhHHHHHHHhhhC--CCeEEEEecCCCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVD--GLKVLHMDRNAYY 39 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~n~~~ 39 (445)
...|+|||+|.+|+-+|..|++. |.+|+++++++.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 45799999999999999999999 9999999998754
No 314
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=92.63 E-value=0.09 Score=54.81 Aligned_cols=32 Identities=25% Similarity=0.245 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRN 36 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n 36 (445)
-.|+|||+|..|+-+|..|++.|.+|+++++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 36999999999999999999999999999987
No 315
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.51 E-value=0.12 Score=48.91 Aligned_cols=34 Identities=32% Similarity=0.530 Sum_probs=31.6
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
...|.|||.|.-|...|..|+++|++|+++|++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999885
No 316
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.45 E-value=0.12 Score=48.99 Aligned_cols=35 Identities=29% Similarity=0.224 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
...|.|||+|.-|...|..|++.|++|++++++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998754
No 317
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=92.41 E-value=0.12 Score=53.73 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
..|+|||+|..|+-+|..|++.|.+|+++++.+++...
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc
Confidence 46999999999999999999999999999999887654
No 318
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.40 E-value=0.11 Score=49.54 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC--eEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL--KVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~ 37 (445)
..|+|||+|-.|...|..|+++|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 479999999999999999999999 999999974
No 319
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.37 E-value=0.07 Score=44.40 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|+|||+|..|...|..|++.|.+|++++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 469999999999999999999999999999874
No 320
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.29 E-value=0.079 Score=53.46 Aligned_cols=33 Identities=21% Similarity=0.358 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|||+|+|-.|..+|..|+..|++|+++|++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 469999999999999999999999999999984
No 321
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.29 E-value=0.13 Score=45.96 Aligned_cols=33 Identities=33% Similarity=0.302 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..+.|||+|..|...|..|+++|++|.+++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999874
No 322
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.29 E-value=0.12 Score=49.43 Aligned_cols=32 Identities=25% Similarity=0.561 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|--|.+.|..|+++|++|+++ +++
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 46999999999999999999999999999 664
No 323
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=92.23 E-value=0.091 Score=53.86 Aligned_cols=37 Identities=16% Similarity=-0.032 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+.+..
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~ 392 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA 392 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc
Confidence 4799999999999999999999999999999988753
No 324
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.20 E-value=0.091 Score=49.26 Aligned_cols=33 Identities=24% Similarity=0.267 Sum_probs=31.1
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
.|.|||+|.-|...|..|+++|++|++++++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 599999999999999999999999999999864
No 325
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.19 E-value=0.12 Score=50.93 Aligned_cols=34 Identities=18% Similarity=0.143 Sum_probs=31.7
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
-.|+|||+|..|+.+|..|...|.+|+++|++..
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4799999999999999999999999999999864
No 326
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=92.18 E-value=0.35 Score=50.26 Aligned_cols=39 Identities=23% Similarity=0.339 Sum_probs=37.0
Q ss_pred cccEEEECCChhHHHHHHHhhhC------CCeEEEEecCCCCCCc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVD------GLKVLHMDRNAYYGGE 42 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~------G~~VlvlE~n~~~GG~ 42 (445)
+|||||||||++||++|..|++. |.+|+|+||++.+|+.
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~ 79 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH 79 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc
Confidence 48999999999999999999999 9999999999999875
No 327
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=92.18 E-value=0.083 Score=50.05 Aligned_cols=36 Identities=25% Similarity=0.442 Sum_probs=30.2
Q ss_pred CCCc-ccEEEECCChhHHHHHHHhhhC-----C-CeEEEEecC
Q 036458 1 MDED-YDVIVLGTGLKECILSGVLSVD-----G-LKVLHMDRN 36 (445)
Q Consensus 1 m~~~-~DViIIGaGl~Gl~aA~~La~~-----G-~~VlvlE~n 36 (445)
|++. ..|.|||+|.-|...|..|+++ | ++|+++++.
T Consensus 4 m~~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r~ 46 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIARG 46 (317)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECCH
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEcH
Confidence 4544 4799999999999999999999 9 999999874
No 328
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=92.10 E-value=0.11 Score=49.08 Aligned_cols=36 Identities=25% Similarity=0.375 Sum_probs=28.8
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
|.+ +|.+||-|.-|...|..|.++|++|+++|++..
T Consensus 4 Ms~--kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 4 MSE--KIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CCC--EEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CCC--cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 554 599999999999999999999999999998764
No 329
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.10 E-value=0.14 Score=45.47 Aligned_cols=32 Identities=28% Similarity=0.223 Sum_probs=29.8
Q ss_pred cEEEEC-CChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 6 DVIVLG-TGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.|.||| +|..|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 489999 99999999999999999999999874
No 330
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.07 E-value=0.11 Score=51.81 Aligned_cols=33 Identities=24% Similarity=0.300 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..+.|||.|.-||.+|..||++|++|+.+|-+.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999875
No 331
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=92.06 E-value=0.12 Score=48.43 Aligned_cols=37 Identities=24% Similarity=0.214 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
..|+|||+|..|+-+|..|++.|.+|+++++++++..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~ 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc
Confidence 4699999999999999999999999999999988765
No 332
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.04 E-value=0.13 Score=49.39 Aligned_cols=33 Identities=18% Similarity=0.273 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC-eEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~ 37 (445)
..|.|||+|..|..+|..|++.|+ +|.++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 479999999999999999999999 999999985
No 333
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=91.95 E-value=0.14 Score=48.99 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 369999999999999999999999999999885
No 334
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.91 E-value=0.16 Score=48.56 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHH-HHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECI-LSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~-aA~~La~~G~~VlvlE~n~~ 38 (445)
..|.|||.|-+|++ +|..|.+.|++|++.|+++.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 46999999999996 78899999999999999875
No 335
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.90 E-value=0.13 Score=51.27 Aligned_cols=33 Identities=15% Similarity=0.170 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
..|.|||+|.-|+..|..|++ |++|+++|++..
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 479999999999999999998 999999998753
No 336
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.90 E-value=0.11 Score=49.72 Aligned_cols=30 Identities=30% Similarity=0.232 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEec
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDR 35 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~ 35 (445)
.|.|||+|.-|...|..|+++|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 489999999999999999999999999999
No 337
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=91.84 E-value=0.13 Score=52.91 Aligned_cols=36 Identities=22% Similarity=0.185 Sum_probs=32.5
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
-.++|||+|..||-.|..+++-|.+|++++++..+-
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~ 259 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR 259 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc
Confidence 469999999999999999999999999999876553
No 338
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=91.84 E-value=0.091 Score=51.11 Aligned_cols=32 Identities=28% Similarity=0.268 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.|.|||+|.-|...|..|+++|++|++++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 69999999999999999999999999999874
No 339
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.83 E-value=0.14 Score=48.62 Aligned_cols=32 Identities=28% Similarity=0.409 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHhhhCCC--eEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGL--KVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~ 37 (445)
.|+|||+|..|...|..|+.+|+ +|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 58999999999999999999999 999999985
No 340
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=91.77 E-value=0.14 Score=48.33 Aligned_cols=33 Identities=18% Similarity=0.464 Sum_probs=30.9
Q ss_pred cEEEEC-CChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 6 DVIVLG-TGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 6 DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
.|.||| +|.-|.+.|..|+++|++|++++++..
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 699999 999999999999999999999998764
No 341
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.74 E-value=0.17 Score=48.31 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHHhhhCCC-eEEEEecCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNA 37 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~ 37 (445)
...|.|||+|..|..+|..|+..|+ +|.++|.++
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 3579999999999999999999999 999999983
No 342
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.74 E-value=0.15 Score=48.46 Aligned_cols=32 Identities=19% Similarity=0.123 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.++.|||+|--|.+.|..|+ +|++|++++|+.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 46999999999999999999 999999999875
No 343
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=91.74 E-value=0.41 Score=49.52 Aligned_cols=42 Identities=24% Similarity=0.404 Sum_probs=39.1
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGEST 44 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~ 44 (445)
.++||+|||+|++||++|..|++.|++|+++|+++.+||...
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~ 166 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTK 166 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchh
Confidence 358999999999999999999999999999999999998753
No 344
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=91.73 E-value=0.15 Score=47.80 Aligned_cols=33 Identities=12% Similarity=0.192 Sum_probs=30.7
Q ss_pred ccEEEECC-ChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGT-GLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+ |.-|...|..|+++|++|++++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 37999999 9999999999999999999999874
No 345
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.71 E-value=0.11 Score=48.48 Aligned_cols=35 Identities=17% Similarity=0.147 Sum_probs=32.0
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
...|+|||+|-.|+..|..|.+.|.+|+|++.+..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 45799999999999999999999999999998754
No 346
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=91.67 E-value=0.17 Score=51.22 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
-.++|||+|..|+-+|..|++.|.+|+++++...
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 219 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP 219 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcc
Confidence 3699999999999999999999999999998653
No 347
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=91.63 E-value=0.15 Score=47.70 Aligned_cols=35 Identities=23% Similarity=0.162 Sum_probs=33.1
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYY 39 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~ 39 (445)
..|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 46999999999999999999999999999999887
No 348
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=91.63 E-value=0.13 Score=51.18 Aligned_cols=33 Identities=27% Similarity=0.328 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
+..|||.|.-|+..|..|+++|++|+++|++..
T Consensus 13 ~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 578999999999999999999999999999853
No 349
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=91.61 E-value=0.49 Score=40.42 Aligned_cols=55 Identities=20% Similarity=0.186 Sum_probs=43.3
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCCc
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTS-EGETAKCKKVVCDPSYLPD 290 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~-~g~~~~ad~VI~~~~~~p~ 290 (445)
.++.+.+.+.++..|.+++++ +|++|..+ ++. ..+.. +| +++||.||.+.+..|.
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~-~~~-~~v~~~~g-~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDM-GGV-FEVETEEG-VEKAERLLLCTHKDPT 111 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEEC-SSS-EEEECSSC-EEEEEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEc-CCE-EEEEECCC-EEEECEEEECCCCCCC
Confidence 467778888888899999999 99999874 444 34554 55 8999999999887763
No 350
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.58 E-value=0.15 Score=48.00 Aligned_cols=33 Identities=15% Similarity=0.135 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|.-|...|..|+++|++|++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 469999999999999999999999999999874
No 351
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.56 E-value=0.13 Score=50.85 Aligned_cols=31 Identities=26% Similarity=0.250 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.|.|||+|.-|+..|..|++ |++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58999999999999999999 99999999874
No 352
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=91.53 E-value=0.14 Score=51.67 Aligned_cols=37 Identities=11% Similarity=0.120 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHHhhhC-CCeEEEEecCCCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVD-GLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~-G~~VlvlE~n~~~GG 41 (445)
.+++|||+|..|+-+|..|++. |.+|+++|+.+++..
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~ 197 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP 197 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc
Confidence 5799999999999999999999 999999999987654
No 353
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=91.53 E-value=0.17 Score=47.82 Aligned_cols=38 Identities=18% Similarity=0.155 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
..|+|||+|..|+-+|..|++.|.+|+++++.+++.+.
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~ 192 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH 192 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc
Confidence 46999999999999999999999999999999887543
No 354
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=91.48 E-value=0.18 Score=51.52 Aligned_cols=32 Identities=28% Similarity=0.300 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRN 36 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n 36 (445)
-.++|||+|..|+-+|..|++.|.+|+++++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 35999999999999999999999999999985
No 355
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.46 E-value=0.13 Score=50.30 Aligned_cols=33 Identities=21% Similarity=0.185 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
-.|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999885
No 356
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.46 E-value=0.088 Score=47.34 Aligned_cols=33 Identities=12% Similarity=0.227 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEE-EecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLH-MDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~Vlv-lE~n~ 37 (445)
..|.|||+|.-|...|..|+++|++|++ ++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 4799999999999999999999999999 88874
No 357
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=91.38 E-value=0.15 Score=45.56 Aligned_cols=38 Identities=18% Similarity=0.316 Sum_probs=32.2
Q ss_pred CCCcccEEEEC-CChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 1 MDEDYDVIVLG-TGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 1 m~~~~DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
|.....|+|.| +|..|..++..|.++|++|.++.|+..
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 66556799999 599999999999999999999999843
No 358
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.34 E-value=0.14 Score=48.80 Aligned_cols=33 Identities=15% Similarity=0.173 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHhhhCC-CeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDG-LKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~n~ 37 (445)
..|.|||+|.-|...|..|+++| ++|+++|++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 46999999999999999999999 9999999985
No 359
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.33 E-value=0.16 Score=48.56 Aligned_cols=34 Identities=18% Similarity=0.274 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHhhhCC----CeEEEEecCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDG----LKVLHMDRNA 37 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G----~~VlvlE~n~ 37 (445)
...|.|||+|.-|...|..|+++| ++|++++++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 457999999999999999999999 8999999875
No 360
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.27 E-value=0.2 Score=45.17 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=30.7
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRN 36 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n 36 (445)
...|+|||+|-.|...|..|.++|.+|+|++.+
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 457999999999999999999999999999875
No 361
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=91.23 E-value=0.1 Score=47.22 Aligned_cols=34 Identities=9% Similarity=0.006 Sum_probs=30.3
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
.-.++|+|+|-.|..+|..|.+.|+ |+++|++..
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 3469999999999999999999999 999998753
No 362
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.22 E-value=0.19 Score=49.95 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=32.0
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
+-.|||||.|-.|..+|..|.+.|++|+++|++..
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 34699999999999999999999999999999853
No 363
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=91.14 E-value=0.47 Score=48.17 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHhhh---CCCeEEEEecCCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSV---DGLKVLHMDRNAY 38 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~---~G~~VlvlE~n~~ 38 (445)
.+||||||||++|+++|+.|++ .|.+|+|+|+.+.
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 3799999999999999999999 9999999999864
No 364
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=91.14 E-value=0.35 Score=48.98 Aligned_cols=43 Identities=23% Similarity=0.327 Sum_probs=38.9
Q ss_pred CcccEEEECCChhHHHHHHHhhh-CCCeEEEEe--------cCCCCCCcccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSV-DGLKVLHMD--------RNAYYGGESTS 45 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE--------~n~~~GG~~~s 45 (445)
.+|||+|||||.+|++||..|++ .|++|+++| +++.+||.|..
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~ 53 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVN 53 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHH
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccC
Confidence 46999999999999999999999 999999999 47789997753
No 365
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=91.13 E-value=0.33 Score=49.24 Aligned_cols=41 Identities=20% Similarity=0.256 Sum_probs=38.1
Q ss_pred cccEEEECCChhHHHHHHHhhhC---CCeEEEEecCCCCCCcccc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVD---GLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~---G~~VlvlE~n~~~GG~~~s 45 (445)
+|||||||||++|++||..|++. |++|+++|+++ +||.+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~ 45 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVL 45 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccC
Confidence 48999999999999999999999 99999999999 9997653
No 366
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.05 E-value=0.19 Score=47.75 Aligned_cols=32 Identities=16% Similarity=0.191 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHhhhC--CCeEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVD--GLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~n~ 37 (445)
.|.|||+|..|...|..|++. |++|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999985 79999999985
No 367
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.02 E-value=0.16 Score=48.36 Aligned_cols=32 Identities=16% Similarity=0.207 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC-eEEEEecC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL-KVLHMDRN 36 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n 36 (445)
..|.|||+|.-|...|..|+++|+ +|+++|++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 479999999999999999999999 99999997
No 368
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=90.92 E-value=0.18 Score=50.68 Aligned_cols=35 Identities=23% Similarity=0.139 Sum_probs=31.8
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC-eEEEEecCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNAYY 39 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~~~ 39 (445)
.+|+|||+|.+|+-+|..|.+.|. +|+++++++..
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 469999999999999999999997 69999998865
No 369
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=90.88 E-value=0.4 Score=48.66 Aligned_cols=45 Identities=24% Similarity=0.340 Sum_probs=40.9
Q ss_pred CCCcccEEEECCChhHHHHHHHhhh-CCCeEEEEe--------cCCCCCCcccc
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSV-DGLKVLHMD--------RNAYYGGESTS 45 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE--------~n~~~GG~~~s 45 (445)
|..+|||+|||||.+|++||..|++ .|++|+++| +++.+||.|..
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~ 57 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVN 57 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHH
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeec
Confidence 7778999999999999999999999 999999999 47789997753
No 370
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.87 E-value=0.19 Score=50.92 Aligned_cols=34 Identities=18% Similarity=0.192 Sum_probs=31.6
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
+.+|.|||+|.-|...|..|+++|++|++++++.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4689999999999999999999999999999873
No 371
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=90.86 E-value=0.5 Score=48.58 Aligned_cols=38 Identities=11% Similarity=0.204 Sum_probs=34.5
Q ss_pred CC-CcccEEEECCChhHHHHHHHhhh---CCCeEEEEecCCC
Q 036458 1 MD-EDYDVIVLGTGLKECILSGVLSV---DGLKVLHMDRNAY 38 (445)
Q Consensus 1 m~-~~~DViIIGaGl~Gl~aA~~La~---~G~~VlvlE~n~~ 38 (445)
|+ ..+||||||||++|+++|..|++ .|.+|+|+|+.+.
T Consensus 21 M~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 21 MSGKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCSCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 53 46899999999999999999999 9999999999764
No 372
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=90.83 E-value=0.36 Score=48.76 Aligned_cols=42 Identities=21% Similarity=0.321 Sum_probs=38.8
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcccc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGESTS 45 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~~s 45 (445)
.+|||+|||||++||+||..|++.|++|+++|+ +.+||.|..
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 66 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVI 66 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceec
Confidence 369999999999999999999999999999999 789997754
No 373
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=90.75 E-value=0.2 Score=48.31 Aligned_cols=33 Identities=27% Similarity=0.277 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
-.|.|||.|.-|.+.|..|.++|++|+++|++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999986
No 374
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=90.71 E-value=0.2 Score=46.32 Aligned_cols=33 Identities=9% Similarity=-0.045 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
..|+|||+|..|+-+|..|++.| +|+++++.+.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 47999999999999999999999 9999998776
No 375
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=90.68 E-value=0.18 Score=53.83 Aligned_cols=32 Identities=22% Similarity=0.346 Sum_probs=30.6
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 59999999999999999999999999999985
No 376
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=90.67 E-value=0.26 Score=45.68 Aligned_cols=37 Identities=24% Similarity=0.308 Sum_probs=32.1
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
|.. ..|+|.|||.-|..++..|.++|++|+.+.|+..
T Consensus 1 M~~-~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 1 MSL-SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp -CC-CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCC-CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 443 4799999999999999999999999999998754
No 377
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=90.65 E-value=0.19 Score=46.21 Aligned_cols=37 Identities=11% Similarity=0.144 Sum_probs=32.7
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCC----CeEEEEecCCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDG----LKVLHMDRNAY 38 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G----~~VlvlE~n~~ 38 (445)
|. ...|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 2 m~-~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 2 ME-NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp CS-SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CC-CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 44 357999999999999999999999 79999998865
No 378
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=90.63 E-value=0.46 Score=49.36 Aligned_cols=41 Identities=15% Similarity=0.205 Sum_probs=37.4
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGES 43 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~ 43 (445)
.++||||||+|++||+||..|+++|.+|+|+||++..||..
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s 46 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHT 46 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcc
Confidence 35899999999999999999999999999999998876644
No 379
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.59 E-value=0.22 Score=47.50 Aligned_cols=33 Identities=24% Similarity=0.443 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC--eEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL--KVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~ 37 (445)
..|.|||+|.-|...|..|+++|+ +|+++|++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 469999999999999999999999 999999986
No 380
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=90.56 E-value=0.26 Score=49.82 Aligned_cols=33 Identities=24% Similarity=0.236 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
-.++|||+|..|+-+|..|++.|.+|+++++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI 220 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 369999999999999999999999999999853
No 381
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.51 E-value=0.22 Score=46.64 Aligned_cols=32 Identities=19% Similarity=0.142 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.|.|||+|.-|...|..|+++|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999999875
No 382
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=90.50 E-value=0.22 Score=46.16 Aligned_cols=32 Identities=28% Similarity=0.412 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.|.|||+|.-|...|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 48999999999999999999999999999874
No 383
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.48 E-value=0.25 Score=47.15 Aligned_cols=34 Identities=12% Similarity=0.210 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHHHhhhCCC--eEEEEecCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGL--KVLHMDRNA 37 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~ 37 (445)
..+|+|||+|-.|.++|..|+..|. +|.++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 999999874
No 384
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=90.45 E-value=0.11 Score=47.20 Aligned_cols=33 Identities=15% Similarity=0.122 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|.-|.+.|..|+++|++|+.+++..
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~~ 39 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAPE 39 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSSGG
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecCHH
Confidence 479999999999999999999999999999853
No 385
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=90.45 E-value=0.19 Score=46.13 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHhhhCC-CeEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDG-LKVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~n~ 37 (445)
.|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 4899999999999999999999 9999999874
No 386
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=90.41 E-value=0.24 Score=50.02 Aligned_cols=36 Identities=19% Similarity=0.186 Sum_probs=32.4
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
|. +.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 3 m~-~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 3 MA-QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp CT-TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CC-CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 54 3689999999999999999999999999999863
No 387
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=90.40 E-value=0.34 Score=49.21 Aligned_cols=40 Identities=25% Similarity=0.354 Sum_probs=35.3
Q ss_pred CCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 2 DEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
.+++||+|||||++|+++|+.|+++|++|+|+||++..+|
T Consensus 1 M~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~g 40 (501)
T 2qcu_A 1 METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACA 40 (501)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 0369999999999999999999999999999999985544
No 388
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=90.40 E-value=0.18 Score=51.10 Aligned_cols=33 Identities=18% Similarity=0.279 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHhhhC--CCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVD--GLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~n~ 37 (445)
..|.|||+|.-|+..|..|+++ |++|+++|++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 3799999999999999999999 79999999863
No 389
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=90.39 E-value=0.14 Score=49.49 Aligned_cols=34 Identities=12% Similarity=0.120 Sum_probs=31.7
Q ss_pred ccEEEECCChhHHHHHHHhhhCC-------CeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDG-------LKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G-------~~VlvlE~n~~ 38 (445)
..|.|||+|.-|...|..|+++| ++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 47999999999999999999999 99999999876
No 390
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=90.27 E-value=0.39 Score=48.15 Aligned_cols=56 Identities=18% Similarity=0.195 Sum_probs=44.2
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEE-e-CCeEEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVT-S-EGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~-~-~g~~~~ad~VI~~~~~~p 289 (445)
.++.+.+.+.++..|.+++++++|++|..++++. ..|. . +|+ +.||.||.+.+..|
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGR-RVATTMKHGE-IVADQVMLALGRMP 268 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSC-EEEEESSSCE-EEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCE-EEEEEcCCCe-EEeCEEEEeeCccc
Confidence 4677888888899999999999999998743443 3455 4 666 99999999887654
No 391
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.25 E-value=0.25 Score=45.86 Aligned_cols=33 Identities=15% Similarity=0.084 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|+|+|+|-.|..+|..|++.|.+|++++|+.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 469999999999999999999999999998873
No 392
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=90.21 E-value=0.43 Score=48.76 Aligned_cols=59 Identities=17% Similarity=0.160 Sum_probs=46.2
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcE--EEEEe-CCe-EEEcCEEEECCCCCCc
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKV--IGVTS-EGE-TAKCKKVVCDPSYLPD 290 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~--~~v~~-~g~-~~~ad~VI~~~~~~p~ 290 (445)
.++.+.+.+.++..|.+++++++|++|..++++++ +.|.. +|+ ++.||.||.+.+..|.
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~ 317 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPR 317 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEEC
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccC
Confidence 36778888888999999999999999987435543 33444 666 8999999999887764
No 393
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=90.13 E-value=0.26 Score=50.18 Aligned_cols=33 Identities=18% Similarity=0.130 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|.-|...|..|+++|++|++++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999875
No 394
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=90.02 E-value=0.28 Score=49.67 Aligned_cols=34 Identities=18% Similarity=0.241 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..+|.|||.|.-|...|..|+++|++|++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999985
No 395
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.96 E-value=0.24 Score=48.87 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
-.|+|||+|..|+.+|..|...|.+|+++|++..
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4699999999999999999999999999998753
No 396
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=89.96 E-value=0.62 Score=41.88 Aligned_cols=56 Identities=18% Similarity=0.167 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHHc-CcEEEeCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVY-GGTYMLNKPECKVEFDGDGKVIGVTS-EGETAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~-Gg~i~l~~~V~~I~~~~~g~~~~v~~-~g~~~~ad~VI~~~~~~p 289 (445)
.++.+.+.+.++.. |.+++ +++|++|..+ ++++.+|.+ +|+++.||.||.+.+.++
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 35667777777776 77887 6899999874 666666764 677899999999988764
No 397
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=89.90 E-value=0.36 Score=41.95 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=31.8
Q ss_pred CCCcccEEEECC-ChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 1 MDEDYDVIVLGT-GLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 1 m~~~~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
|.. ..|+|.|+ |..|..++..|.++|++|.++.|+.
T Consensus 1 M~~-~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 1 MAV-KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CCC-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCC-CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 543 46999998 9999999999999999999999875
No 398
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=89.89 E-value=0.26 Score=46.19 Aligned_cols=33 Identities=27% Similarity=0.317 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|..|...|..|++.|++|.+++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 369999999999999999999999999999874
No 399
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=89.85 E-value=0.56 Score=46.82 Aligned_cols=56 Identities=25% Similarity=0.167 Sum_probs=44.5
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEE--e--CCe--EEEcCEEEECCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVT--S--EGE--TAKCKKVVCDPSYL 288 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~--~--~g~--~~~ad~VI~~~~~~ 288 (445)
..+.+.|.+.++..|++++++++|++|..+ ++++++|+ . +|+ +++||.||.+.+..
T Consensus 100 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~ 161 (453)
T 3atr_A 100 PLYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGYS 161 (453)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCCc
Confidence 357788888888889999999999999884 66676554 2 665 79999999987644
No 400
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=89.82 E-value=0.18 Score=49.71 Aligned_cols=30 Identities=33% Similarity=0.440 Sum_probs=27.9
Q ss_pred ccEEEECCChhHHHHHHHhhh-CCCeEEEEe
Q 036458 5 YDVIVLGTGLKECILSGVLSV-DGLKVLHMD 34 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE 34 (445)
..|.|||+|.-|++.|..|++ +|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 369999999999999999998 599999999
No 401
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=89.82 E-value=0.22 Score=47.47 Aligned_cols=32 Identities=16% Similarity=0.278 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHhhhCCC--eEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGL--KVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~ 37 (445)
.|.|||+|-.|.+.|..|+++|+ +|+++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999999 999999874
No 402
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=89.82 E-value=0.18 Score=49.26 Aligned_cols=33 Identities=21% Similarity=0.344 Sum_probs=31.0
Q ss_pred cEEEECCChhHHHHHHHhhhCC-------CeEEEEecCCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDG-------LKVLHMDRNAY 38 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G-------~~VlvlE~n~~ 38 (445)
.|.|||+|.-|.+.|..|+++| ++|++++++..
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 6999999999999999999999 99999998765
No 403
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=89.77 E-value=0.28 Score=49.66 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999874
No 404
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=89.76 E-value=0.25 Score=45.56 Aligned_cols=33 Identities=21% Similarity=0.354 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCe-EEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLK-VLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~-VlvlE~n~ 37 (445)
..|.|||+|.-|...|..|+++|++ |.+++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 4799999999999999999999999 99999874
No 405
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=89.64 E-value=0.3 Score=46.35 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC-eEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~ 37 (445)
..|.|||+|-.|..+|..|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 469999999999999999999997 999999875
No 406
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.59 E-value=0.3 Score=45.41 Aligned_cols=32 Identities=25% Similarity=0.475 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHhhhCCC--eEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGL--KVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~ 37 (445)
.|.|||+|.-|...|..|+++|+ +|+++|++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 58999999999999999999999 999999875
No 407
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.56 E-value=0.25 Score=45.33 Aligned_cols=33 Identities=24% Similarity=0.423 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC-eEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~ 37 (445)
..|+|||+|=.|+.+|..|++.|. +++++|+..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 479999999999999999999996 899999874
No 408
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=89.56 E-value=0.21 Score=53.21 Aligned_cols=33 Identities=24% Similarity=0.259 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 369999999999999999999999999999985
No 409
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.53 E-value=0.33 Score=44.85 Aligned_cols=33 Identities=24% Similarity=0.474 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|+|.|||.-|..++..|.++|++|+.+.|+.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 369999999999999999999999999999875
No 410
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.53 E-value=0.3 Score=46.77 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=30.8
Q ss_pred cccEEEECCChhHHHHHHHhhhCCC--eEEEEecCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGL--KVLHMDRNA 37 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~ 37 (445)
...|.|||+|..|.++|..|+..|. +|.++|.+.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4579999999999999999999997 999999863
No 411
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=89.52 E-value=0.27 Score=49.43 Aligned_cols=35 Identities=17% Similarity=0.212 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHhh--------------------hCCC-eEEEEecCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLS--------------------VDGL-KVLHMDRNAYY 39 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La--------------------~~G~-~VlvlE~n~~~ 39 (445)
-.|+|||+|..|+-+|..|+ +.|. +|+++++++..
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 47999999999999999999 6786 79999988653
No 412
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=89.50 E-value=0.24 Score=46.93 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHhhhCC--CeEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDG--LKVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G--~~VlvlE~n~ 37 (445)
.|.|||+|-.|...|..|+++| ++|+++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 7999999974
No 413
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=89.47 E-value=0.44 Score=48.27 Aligned_cols=40 Identities=13% Similarity=0.235 Sum_probs=36.3
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhC--CCeEEEEecCCCCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVD--GLKVLHMDRNAYYG 40 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~n~~~G 40 (445)
|..++||||||+|++|++||..|.++ |.+|+++|++++.|
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 45679999999999999999999887 89999999998875
No 414
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.42 E-value=0.33 Score=45.06 Aligned_cols=33 Identities=27% Similarity=0.445 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|+|||+|-+|.++|..|++.|.+|+|+.|+.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999998874
No 415
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=89.39 E-value=0.31 Score=47.82 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
-.|+|+|+|..|+.+|..|...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999885
No 416
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=89.34 E-value=0.29 Score=49.53 Aligned_cols=32 Identities=31% Similarity=0.395 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
+|.|||+|.-|...|..|+++|++|++++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999864
No 417
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.28 E-value=0.33 Score=47.13 Aligned_cols=33 Identities=24% Similarity=0.239 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
-.|+|+|+|-.|+.++..|...|.+|++++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999874
No 418
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=89.27 E-value=0.29 Score=45.51 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.|.|||+|.-|...|..|++ |++|++++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 59999999999999999999 99999999875
No 419
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=89.26 E-value=0.33 Score=44.45 Aligned_cols=33 Identities=9% Similarity=0.116 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|.-|...|..|++.|++|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 479999999999999999999999999999874
No 420
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.24 E-value=0.31 Score=47.63 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHhhhCCC-eEEEEecCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNA 37 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~ 37 (445)
+-.|+|+|+|-+|+.+|..|...|. +|+++|++.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4579999999999999999999998 999999995
No 421
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=89.16 E-value=0.21 Score=49.15 Aligned_cols=39 Identities=21% Similarity=0.315 Sum_probs=35.7
Q ss_pred cccEEEECCChhHHHHHHHhhhC--CCeEEEEecCCCCCCc
Q 036458 4 DYDVIVLGTGLKECILSGVLSVD--GLKVLHMDRNAYYGGE 42 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~n~~~GG~ 42 (445)
++||+|||+|++||++|+.|+++ |++|+|+|+++..+|.
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~ 76 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEE 76 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTT
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcc
Confidence 58999999999999999999999 9999999998766554
No 422
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=89.16 E-value=0.29 Score=52.31 Aligned_cols=36 Identities=19% Similarity=0.169 Sum_probs=32.9
Q ss_pred ccEEEEC--CChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 5 YDVIVLG--TGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 5 ~DViIIG--aGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
-.|+||| +|..|+-+|..|++.|.+|+++++.+ +..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~ 566 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LAN 566 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccc
Confidence 4799999 99999999999999999999999998 654
No 423
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.11 E-value=0.28 Score=45.59 Aligned_cols=33 Identities=18% Similarity=0.131 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|+|+|+|-.|..+|..|++.|.+|+++.|+.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 469999999999999999999999999999874
No 424
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=89.04 E-value=0.37 Score=46.61 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=30.5
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
.|+|||+|..|..+|.++.+.|++|+++|.++.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 499999999999999999999999999998754
No 425
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=89.03 E-value=0.39 Score=45.90 Aligned_cols=33 Identities=18% Similarity=0.361 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC-eEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~ 37 (445)
.+|.|||+|-.|.++|..|+..|+ +|.++|.+.
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 579999999999999999999999 999999986
No 426
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.96 E-value=0.36 Score=47.02 Aligned_cols=33 Identities=24% Similarity=0.249 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|+|+|+|-.|+.+|..|+..|.+|+++|++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999875
No 427
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=88.95 E-value=0.42 Score=42.08 Aligned_cols=32 Identities=25% Similarity=0.284 Sum_probs=29.5
Q ss_pred cEEEEC-CChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 6 DVIVLG-TGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.|+|.| +|..|..++..|+++|++|+++.|+.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 489999 59999999999999999999999974
No 428
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=88.88 E-value=0.22 Score=54.96 Aligned_cols=38 Identities=18% Similarity=0.081 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCc
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGE 42 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~ 42 (445)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~~ 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSISAA 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccchh
Confidence 46999999999999999999999999999999987643
No 429
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=88.83 E-value=0.36 Score=46.42 Aligned_cols=33 Identities=21% Similarity=0.194 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|.-|.+.|..|++.|++|++.+++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 359999999999999999999999999999875
No 430
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.63 E-value=0.44 Score=44.46 Aligned_cols=36 Identities=17% Similarity=0.275 Sum_probs=31.8
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCC---eEEEEecCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGL---KVLHMDRNA 37 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~---~VlvlE~n~ 37 (445)
|. ...|.|||+|.-|.+.|..|+++|+ +|+++|++.
T Consensus 1 M~-~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 1 MN-TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp -C-CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CC-CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 43 3579999999999999999999999 999999985
No 431
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=88.55 E-value=0.36 Score=47.02 Aligned_cols=33 Identities=27% Similarity=0.376 Sum_probs=30.8
Q ss_pred cccEEEECCChhHHHHHHHhhhCCC-eEEEEecC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGL-KVLHMDRN 36 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n 36 (445)
+-.|+|+|+|-+|..+|..|...|. +|+++|++
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4579999999999999999999997 89999998
No 432
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=88.52 E-value=0.29 Score=52.22 Aligned_cols=34 Identities=21% Similarity=0.214 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
-.|.|||+|..|...|..++++|++|+++|.++.
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 3699999999999999999999999999998753
No 433
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=88.50 E-value=0.36 Score=46.07 Aligned_cols=37 Identities=16% Similarity=0.298 Sum_probs=33.2
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCC--eEEEEecCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGL--KVLHMDRNA 37 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~ 37 (445)
|.+..+|+|||+|-.|.++|..|+..|. .+.++|.+.
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 6667899999999999999999999887 899999863
No 434
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=88.45 E-value=0.89 Score=46.48 Aligned_cols=39 Identities=10% Similarity=0.166 Sum_probs=34.8
Q ss_pred CCCcccEEEECCChhHHHHHHHhhh---CCCeEEEEecCCCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSV---DGLKVLHMDRNAYY 39 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~---~G~~VlvlE~n~~~ 39 (445)
|...+||||||||++|+++|+.|++ .|.+|+|+|+.+..
T Consensus 2 ~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~ 43 (538)
T 2aqj_A 2 NKPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIP 43 (538)
T ss_dssp CCBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCC
Confidence 1456999999999999999999999 99999999997654
No 435
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=88.21 E-value=0.47 Score=43.23 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC----eEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL----KVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~----~VlvlE~n~ 37 (445)
..|.|||+|.-|...|..|+++|+ +|.+++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 469999999999999999999998 999999974
No 436
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=88.18 E-value=0.43 Score=45.03 Aligned_cols=33 Identities=15% Similarity=0.138 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC-eEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~ 37 (445)
..|+|||+|-.|..+|..|++.|. +|+++.|+.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 469999999999999999999997 999998873
No 437
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=88.10 E-value=0.48 Score=44.23 Aligned_cols=38 Identities=13% Similarity=0.167 Sum_probs=32.4
Q ss_pred CCCcccEEEECC-ChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 1 MDEDYDVIVLGT-GLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 1 m~~~~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
|.+...|+|.|| |.-|..++..|.++|++|.++.|+..
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 39 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVREST 39 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcc
Confidence 654557999996 99999999999999999999998753
No 438
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=88.09 E-value=0.4 Score=50.81 Aligned_cols=39 Identities=15% Similarity=0.138 Sum_probs=35.1
Q ss_pred ccEEEEC--CChhHHHHHHHhhhCCCeEEEEecCCCCCCcc
Q 036458 5 YDVIVLG--TGLKECILSGVLSVDGLKVLHMDRNAYYGGES 43 (445)
Q Consensus 5 ~DViIIG--aGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~ 43 (445)
-+|+||| +|..|+-+|..|++.|.+|+++++.+.+....
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~ 564 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT 564 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc
Confidence 3599999 99999999999999999999999998876543
No 439
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=88.07 E-value=1.1 Score=43.43 Aligned_cols=58 Identities=12% Similarity=0.171 Sum_probs=43.5
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEE-eCCe--EEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVT-SEGE--TAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~-~~g~--~~~ad~VI~~~~~~p 289 (445)
.++.+.|.+.+...|++++++++|++|..++++.+.... .+|+ +++||.||.+.+...
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCc
Confidence 467778888887789999999999999874233333222 5777 799999999877654
No 440
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=87.95 E-value=0.55 Score=44.58 Aligned_cols=38 Identities=21% Similarity=0.222 Sum_probs=33.4
Q ss_pred CCCcccEEEEC-CChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 1 MDEDYDVIVLG-TGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 1 m~~~~DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
|.....|+|.| +|.-|..+|..|+++|++|.+++++..
T Consensus 2 M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 40 (341)
T 3enk_A 2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVN 40 (341)
T ss_dssp CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 66666799998 599999999999999999999998764
No 441
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.89 E-value=0.52 Score=42.26 Aligned_cols=33 Identities=30% Similarity=0.363 Sum_probs=30.4
Q ss_pred ccEEEECC-ChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGT-GLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|+|.|+ |.-|..+|..|.++|++|+++.|+.
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 46999997 9999999999999999999999874
No 442
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=87.89 E-value=0.38 Score=44.79 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|+|||+|-.|.+.|..|++.|.+|++++++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 469999999999999999999999999999873
No 443
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=87.88 E-value=0.47 Score=45.14 Aligned_cols=32 Identities=28% Similarity=0.381 Sum_probs=28.4
Q ss_pred ccEEEECCC-hhHHHHHHHhhhCCCeEEEEecC
Q 036458 5 YDVIVLGTG-LKECILSGVLSVDGLKVLHMDRN 36 (445)
Q Consensus 5 ~DViIIGaG-l~Gl~aA~~La~~G~~VlvlE~n 36 (445)
..|+|||+| +.|..+|..|...|.+|++++++
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 469999999 67999999999999999988665
No 444
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=87.77 E-value=0.41 Score=43.97 Aligned_cols=30 Identities=23% Similarity=0.230 Sum_probs=28.2
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEec
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDR 35 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~ 35 (445)
.|.|||+|.-|...|..|+++|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 489999999999999999999999999876
No 445
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.73 E-value=0.48 Score=46.29 Aligned_cols=33 Identities=27% Similarity=0.328 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|+|||+|-.|+.+|..|...|.+|+++|++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999874
No 446
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=87.73 E-value=0.54 Score=44.89 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC-eEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~ 37 (445)
..|.|||+|..|.++|..|+..|. +|.++|.+.
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 579999999999999999999998 999999986
No 447
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=87.68 E-value=0.94 Score=46.00 Aligned_cols=37 Identities=30% Similarity=0.573 Sum_probs=34.4
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYG 40 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~G 40 (445)
++||||||||++||++|..|+++|++|+|+|+++..+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~ 43 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPR 43 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCC
Confidence 5899999999999999999999999999999998543
No 448
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=87.60 E-value=0.39 Score=49.35 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=31.7
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYY 39 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~ 39 (445)
..|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 46999999999999999999999999999987643
No 449
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=87.55 E-value=0.38 Score=45.94 Aligned_cols=37 Identities=16% Similarity=0.123 Sum_probs=32.9
Q ss_pred CCCcccEEEECC-ChhHHHHHHHhhhCCC-------eEEEEecCC
Q 036458 1 MDEDYDVIVLGT-GLKECILSGVLSVDGL-------KVLHMDRNA 37 (445)
Q Consensus 1 m~~~~DViIIGa-Gl~Gl~aA~~La~~G~-------~VlvlE~n~ 37 (445)
|.....|+|+|| |..|..++..|.+.|+ +|.++|++.
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 676678999997 9999999999999996 899999864
No 450
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=87.50 E-value=0.56 Score=41.44 Aligned_cols=32 Identities=25% Similarity=0.366 Sum_probs=29.5
Q ss_pred cEEEECC-ChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 6 DVIVLGT-GLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.|+|.|+ |..|..++..|.++|++|.++.|+.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 3899997 9999999999999999999999874
No 451
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=87.34 E-value=0.55 Score=41.52 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=29.9
Q ss_pred cEEEEC-CChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 6 DVIVLG-TGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.|+|.| +|..|..++..|.++|++|+.+.|+.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 489999 89999999999999999999999985
No 452
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=87.32 E-value=0.56 Score=43.19 Aligned_cols=32 Identities=28% Similarity=0.349 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.++|||+|-.|...|..|.+.|.+|++++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999874
No 453
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=87.32 E-value=0.42 Score=45.01 Aligned_cols=32 Identities=9% Similarity=-0.009 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHhhhCCC--eEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGL--KVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~ 37 (445)
+|.|||+|..|.++|..|+..|+ +|.++|.+.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 58999999999999999999998 999999875
No 454
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=87.28 E-value=0.4 Score=46.95 Aligned_cols=40 Identities=23% Similarity=0.313 Sum_probs=35.4
Q ss_pred cccEEEECC-ChhHHHHHHHhhhCCC---eEEEEecCC-CCCCcc
Q 036458 4 DYDVIVLGT-GLKECILSGVLSVDGL---KVLHMDRNA-YYGGES 43 (445)
Q Consensus 4 ~~DViIIGa-Gl~Gl~aA~~La~~G~---~VlvlE~n~-~~GG~~ 43 (445)
.-.|+|||+ |..|+.|+..+..-|. +|+++|.+. .-||..
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~~ 258 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGPF 258 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSCC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCch
Confidence 357999999 9999999999999997 999999987 567763
No 455
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=87.14 E-value=1.4 Score=44.79 Aligned_cols=37 Identities=19% Similarity=0.343 Sum_probs=34.2
Q ss_pred CcccEEEECCChhHHHHHHHhhh------------CCCeEEEEecCCCC
Q 036458 3 EDYDVIVLGTGLKECILSGVLSV------------DGLKVLHMDRNAYY 39 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~------------~G~~VlvlE~n~~~ 39 (445)
..+||||||||++|+++|..|++ .|.+|+|+|+++.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~ 54 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVA 54 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCC
Confidence 46899999999999999999999 99999999998653
No 456
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=87.09 E-value=0.38 Score=44.89 Aligned_cols=32 Identities=13% Similarity=0.124 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|..|...|..|++.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 369999999999999999999999999998 54
No 457
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=87.08 E-value=0.66 Score=43.22 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=30.7
Q ss_pred cEEEECC-ChhHHHHHHHhhhCCCeEEEEecCCCC
Q 036458 6 DVIVLGT-GLKECILSGVLSVDGLKVLHMDRNAYY 39 (445)
Q Consensus 6 DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~n~~~ 39 (445)
.|+|.|| |.-|..++..|.++|++|+++-|++..
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP 36 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 4899997 999999999999999999999887644
No 458
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=87.02 E-value=0.63 Score=43.79 Aligned_cols=33 Identities=24% Similarity=0.274 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 469999999999999999999999999999874
No 459
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=86.99 E-value=0.56 Score=43.94 Aligned_cols=35 Identities=20% Similarity=0.269 Sum_probs=31.8
Q ss_pred cccEEEECC-ChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 4 DYDVIVLGT-GLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 4 ~~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
...|+|.|+ |.-|..++..|.++|++|+++.|+..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 357999998 99999999999999999999998765
No 460
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=86.91 E-value=0.6 Score=43.66 Aligned_cols=38 Identities=18% Similarity=0.178 Sum_probs=32.3
Q ss_pred CCCcccEEEECC-ChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 1 MDEDYDVIVLGT-GLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 1 m~~~~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
|.+...|+|.|| |.-|..++..|.++|++|.++.|+..
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEV 39 (313)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCc
Confidence 654567999995 99999999999999999999999853
No 461
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=86.84 E-value=0.47 Score=52.75 Aligned_cols=33 Identities=27% Similarity=0.290 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHHhhhCCC-eEEEEecCCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGL-KVLHMDRNAY 38 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~~ 38 (445)
+|+|||+|..|+-+|..|++.|. +|+++++.++
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~ 367 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF 367 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh
Confidence 79999999999999999999995 9999999873
No 462
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=86.80 E-value=0.51 Score=44.14 Aligned_cols=32 Identities=16% Similarity=0.324 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|+|+|+|-.|..+|..|++.| +|++.+|+.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 46999999999999999999999 999998873
No 463
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=86.70 E-value=0.69 Score=42.51 Aligned_cols=32 Identities=22% Similarity=0.293 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHhhhCCC-eEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGL-KVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~ 37 (445)
.++|||+|-+|.+++..|.+.|. +|++++|+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 79999999999999999999997 999999874
No 464
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=86.68 E-value=0.48 Score=45.33 Aligned_cols=33 Identities=15% Similarity=0.090 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC--eEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL--KVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~ 37 (445)
..|.|||+|..|..+|..|+..|. +|.++|.+.
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 579999999999999999999997 999999864
No 465
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=86.62 E-value=1.2 Score=46.87 Aligned_cols=41 Identities=20% Similarity=0.210 Sum_probs=37.4
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGES 43 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~ 43 (445)
.++||||||+|++||+||+.|+++|.+|+||||+...||.+
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s 44 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHS 44 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcc
Confidence 46899999999999999999999999999999998776554
No 466
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=86.56 E-value=0.52 Score=44.59 Aligned_cols=34 Identities=18% Similarity=0.282 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC--eEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL--KVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~~ 38 (445)
..|.|||+|..|...|..|+.+|. .|.++|.+..
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 579999999999999999999999 9999999873
No 467
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=86.44 E-value=0.71 Score=43.29 Aligned_cols=33 Identities=27% Similarity=0.251 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999874
No 468
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=86.38 E-value=0.6 Score=44.38 Aligned_cols=33 Identities=24% Similarity=0.419 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC--eEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL--KVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~ 37 (445)
..|.|||+|..|.++|..|+..|. +|.++|.+.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 579999999999999999998885 899999874
No 469
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=86.33 E-value=1 Score=47.11 Aligned_cols=41 Identities=17% Similarity=0.190 Sum_probs=37.3
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCCcc
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGGES 43 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG~~ 43 (445)
.++||||||+|++||+||..|+++|.+|+|+||....||.+
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s 57 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHT 57 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCc
Confidence 46899999999999999999999999999999998776654
No 470
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=86.23 E-value=0.61 Score=48.07 Aligned_cols=34 Identities=18% Similarity=0.360 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
-.++|||.|--|..+|..|.+.|++|+++|+++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 4699999999999999999999999999999975
No 471
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=86.22 E-value=1.3 Score=41.18 Aligned_cols=57 Identities=11% Similarity=-0.018 Sum_probs=43.2
Q ss_pred cchHHHHHHHHHHH-cCcEEEeCCcceeEEEcCCCcEEEEEe----------CC-----eEEEcCEEEECCCCC
Q 036458 231 LGELPQAFARLSAV-YGGTYMLNKPECKVEFDGDGKVIGVTS----------EG-----ETAKCKKVVCDPSYL 288 (445)
Q Consensus 231 ~~~L~q~l~r~~~~-~Gg~i~l~~~V~~I~~~~~g~~~~v~~----------~g-----~~~~ad~VI~~~~~~ 288 (445)
..++.+.+.+.+.. .|.+++++++|++|..+ ++++.+|.. +| .++.||.||.+.+..
T Consensus 118 ~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 118 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHD 190 (284)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSS
T ss_pred HHHHHHHHHHHHHhcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCc
Confidence 35677777776655 69999999999999884 666767653 22 679999999987754
No 472
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=86.11 E-value=0.56 Score=44.62 Aligned_cols=32 Identities=19% Similarity=0.345 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHhhhCCC--eEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGL--KVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~ 37 (445)
.|.|||+|..|.++|..|++.|. +|.++|.+.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 58999999999999999999997 999999986
No 473
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=86.01 E-value=0.64 Score=46.69 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
...|+|||+|-.|...|..|.++|.+|+|++.+.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 3569999999999999999999999999999853
No 474
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=85.97 E-value=0.55 Score=43.78 Aligned_cols=33 Identities=15% Similarity=0.083 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC-eEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~ 37 (445)
..++|||+|-+|.++|..|++.|. +|+++.|+.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 469999999999999999999998 999998875
No 475
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=85.83 E-value=0.58 Score=43.59 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHhhhC--CCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVD--GLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~n~ 37 (445)
..|.|||+|.-|...|..|+++ |++|+++|++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 4699999999999999999988 68999999874
No 476
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=85.73 E-value=0.66 Score=43.78 Aligned_cols=32 Identities=16% Similarity=0.161 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 6 DVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
.|-+||-|.-|...|..|.++|++|++++++.
T Consensus 5 kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~ 36 (300)
T 3obb_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (300)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEeeehHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 59999999999999999999999999999875
No 477
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=85.47 E-value=1.3 Score=41.89 Aligned_cols=55 Identities=13% Similarity=0.099 Sum_probs=42.6
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEECCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGETAKCKKVVCDPSY 287 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~~~~ad~VI~~~~~ 287 (445)
.++.+.+.+.++..|.+++++++|++|..+ ++.+.+|.+++.++.+|+||.+.+.
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~-~~~~~~v~~~~g~~~~d~vV~AtG~ 130 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHF-GERLRVVARDGRQWLARAVISATGT 130 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEE-TTEEEEEETTSCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEC-CCcEEEEEeCCCEEEeCEEEECCCC
Confidence 466677777778889999999999999884 5544436665458999999998764
No 478
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=85.35 E-value=0.69 Score=44.00 Aligned_cols=34 Identities=15% Similarity=0.284 Sum_probs=30.4
Q ss_pred cccEEEECCChhHHHHHHHhhhCCC--eEEEEecCC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGL--KVLHMDRNA 37 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~ 37 (445)
..+|+|||+|-.|.++|..|+..|. .|.++|.+.
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999985 899999873
No 479
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=85.24 E-value=1.5 Score=45.55 Aligned_cols=39 Identities=21% Similarity=0.207 Sum_probs=36.0
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCCCCCC
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAYYGG 41 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~~GG 41 (445)
+++||||||||++||++|+.|+++|++|+|+|+++.+++
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~ 60 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRY 60 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCC
Confidence 469999999999999999999999999999999976654
No 480
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=85.22 E-value=0.64 Score=47.18 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHH-HHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECI-LSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~-aA~~La~~G~~VlvlE~n~ 37 (445)
..|.|||-|-+|++ +|..|.+.|++|++.|.+.
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 57999999999997 7999999999999999874
No 481
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=85.20 E-value=1.4 Score=44.91 Aligned_cols=59 Identities=10% Similarity=0.017 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHHHcCcEEEeCCcceeEEEcCCC---cEEEEEeCC---eEEEcCEEEECCCCCC
Q 036458 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDGDG---KVIGVTSEG---ETAKCKKVVCDPSYLP 289 (445)
Q Consensus 231 ~~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g---~~~~v~~~g---~~~~ad~VI~~~~~~p 289 (445)
-..+-+.|.+.++..|++++++++|++|..++++ .+.....++ .+++||.||.+.+...
T Consensus 119 ~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 119 QDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 3467788888888889999999999999985432 344333444 7899999999887664
No 482
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=85.11 E-value=1.9 Score=45.06 Aligned_cols=39 Identities=26% Similarity=0.304 Sum_probs=35.3
Q ss_pred CcccEEEECCChhHHHHHHHhhhCCCeEEEEecCC-CCCC
Q 036458 3 EDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA-YYGG 41 (445)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~-~~GG 41 (445)
.+|||||||||++||.||..|++.|.+|+++|++. .+|+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~ 65 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQ 65 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCC
Confidence 46999999999999999999999999999999984 5553
No 483
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=84.97 E-value=0.77 Score=46.24 Aligned_cols=33 Identities=18% Similarity=0.153 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..|+|+|+|-.|..+|..|+..|.+|++.|+++
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999999999999999999999999999874
No 484
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=84.92 E-value=0.45 Score=45.55 Aligned_cols=33 Identities=9% Similarity=0.002 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
-.++|+|.|-.|...|..|.+.|+ |+++|+++.
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~ 148 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDENV 148 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGG
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChh
Confidence 369999999999999999999999 999999863
No 485
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=84.90 E-value=0.84 Score=43.75 Aligned_cols=34 Identities=12% Similarity=0.115 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
..|.|||.|..|...|..|+..|++|++++++..
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 3599999999999999999999999999998764
No 486
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=85.13 E-value=0.18 Score=44.70 Aligned_cols=34 Identities=26% Similarity=0.136 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
..+.|||+|--|...|..|+++|++|++++++..
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ 53 (201)
Confidence 4689999999999999999999999999998754
No 487
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=84.82 E-value=0.58 Score=47.58 Aligned_cols=37 Identities=14% Similarity=0.150 Sum_probs=31.7
Q ss_pred cEEEECCChhHHHHHHHhhhC--------------CCeEEEEecCCCCCCc
Q 036458 6 DVIVLGTGLKECILSGVLSVD--------------GLKVLHMDRNAYYGGE 42 (445)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~--------------G~~VlvlE~n~~~GG~ 42 (445)
.++|||+|.+|+-+|..|+.. ..+|+++|+.+++-..
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~ 269 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNM 269 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTT
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccC
Confidence 599999999999999998753 3689999999987654
No 488
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=84.80 E-value=0.74 Score=44.01 Aligned_cols=33 Identities=18% Similarity=0.272 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC--eEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL--KVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n~ 37 (445)
..|.|||+|..|.++|..|+..|. ++.++|.+.
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 479999999999999999999998 899999863
No 489
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=84.79 E-value=0.96 Score=39.97 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=29.0
Q ss_pred cEEEEC-CChhHHHHHHHhh-hCCCeEEEEecCC
Q 036458 6 DVIVLG-TGLKECILSGVLS-VDGLKVLHMDRNA 37 (445)
Q Consensus 6 DViIIG-aGl~Gl~aA~~La-~~G~~VlvlE~n~ 37 (445)
.|+|.| +|-.|..+|..|+ +.|++|+++.|+.
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 399999 5999999999999 8999999999874
No 490
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=84.74 E-value=0.72 Score=46.24 Aligned_cols=35 Identities=23% Similarity=0.340 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHhhhC--------------------C-CeEEEEecCCCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVD--------------------G-LKVLHMDRNAYY 39 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~--------------------G-~~VlvlE~n~~~ 39 (445)
-.|+|||+|..|+-+|..|++. | .+|+++++++..
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 4699999999999999999974 6 599999988654
No 491
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=84.72 E-value=0.9 Score=43.48 Aligned_cols=33 Identities=15% Similarity=0.183 Sum_probs=30.2
Q ss_pred cccEEEECCChhHHHHHHHhhhCCC--eEEEEecC
Q 036458 4 DYDVIVLGTGLKECILSGVLSVDGL--KVLHMDRN 36 (445)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~n 36 (445)
...|.|||+|..|.++|..|+..|. .+.++|.+
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 3579999999999999999999998 89999987
No 492
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=84.71 E-value=0.97 Score=42.93 Aligned_cols=32 Identities=16% Similarity=0.311 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC-eEEEEecC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL-KVLHMDRN 36 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n 36 (445)
..|+|+|+|=+|.++|..|++.|. +|+++.|+
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 469999999999999999999997 89999887
No 493
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=84.70 E-value=0.84 Score=45.70 Aligned_cols=36 Identities=31% Similarity=0.373 Sum_probs=31.1
Q ss_pred CCCcccEEEECCChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 1 MDEDYDVIVLGTGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 1 m~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
|.. ..|+|+|+|-.|..+|..|++.|++|++.+++.
T Consensus 1 M~~-k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~ 36 (450)
T 1ff9_A 1 MAT-KSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTL 36 (450)
T ss_dssp -CC-CEEEEECCSTTHHHHHHHHHTTTCEEEEEESSH
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHhCcCEEEEEECCH
Confidence 543 469999999999999999999999999999863
No 494
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=84.62 E-value=0.84 Score=43.36 Aligned_cols=32 Identities=28% Similarity=0.175 Sum_probs=29.9
Q ss_pred cEEEECC-ChhHHHHHHHhhhCC--CeEEEEecCC
Q 036458 6 DVIVLGT-GLKECILSGVLSVDG--LKVLHMDRNA 37 (445)
Q Consensus 6 DViIIGa-Gl~Gl~aA~~La~~G--~~VlvlE~n~ 37 (445)
+|+|||| |..|..+|..|+..| ..|.++|.+.
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 5999998 999999999999999 7999999986
No 495
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=84.60 E-value=0.94 Score=42.06 Aligned_cols=33 Identities=18% Similarity=0.138 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC-eEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~ 37 (445)
..++|+|+|-+|.++|..|++.|. +|+++.|+.
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 469999999999999999999994 999998863
No 496
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=84.53 E-value=2.2 Score=43.13 Aligned_cols=57 Identities=7% Similarity=-0.009 Sum_probs=43.0
Q ss_pred chHHHHHHHHHHHcCcEEEeCCcceeEEEcCCCcEEEEEeCCe---EEEcCEEEECCCCCC
Q 036458 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKVIGVTSEGE---TAKCKKVVCDPSYLP 289 (445)
Q Consensus 232 ~~L~q~l~r~~~~~Gg~i~l~~~V~~I~~~~~g~~~~v~~~g~---~~~ad~VI~~~~~~p 289 (445)
..+-+.|.+.++..|++++++++|++|..+ ++.+.....++. +++||+||.+.+...
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~-~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 107 STTESVLEEWALGRGAELLRGHTVRALTDE-GDHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEEEC-SSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 456777888888889999999999999885 444443334443 799999999877653
No 497
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=84.34 E-value=1 Score=41.99 Aligned_cols=33 Identities=12% Similarity=0.087 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHhhhCCC-eEEEEecCC
Q 036458 5 YDVIVLGTGLKECILSGVLSVDGL-KVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~n~ 37 (445)
..++|+|+|-.|.++|..|++.|. +|+++.|+.
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 469999999999999999999995 999998874
No 498
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=84.31 E-value=1 Score=40.46 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=29.4
Q ss_pred cEEEECC-ChhHHHHHHHhhhCCCeEEEEecCCC
Q 036458 6 DVIVLGT-GLKECILSGVLSVDGLKVLHMDRNAY 38 (445)
Q Consensus 6 DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~n~~ 38 (445)
.|+|.|+ |--|..+|..|+++|++|++++|+..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~ 36 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQA 36 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 3888887 89999999999999999999998753
No 499
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=84.26 E-value=0.96 Score=42.17 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=30.2
Q ss_pred ccEEEEC-CChhHHHHHHHhhhCCCeEEEEecCC
Q 036458 5 YDVIVLG-TGLKECILSGVLSVDGLKVLHMDRNA 37 (445)
Q Consensus 5 ~DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~n~ 37 (445)
..++|+| +|-.|..+|..|++.|.+|.+++|+.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 4689999 99999999999999999999999874
No 500
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=84.22 E-value=0.88 Score=42.33 Aligned_cols=38 Identities=32% Similarity=0.391 Sum_probs=31.4
Q ss_pred CCCcccEEEECC-ChhHHHHHHHhhhCC-CeEEEEecCCC
Q 036458 1 MDEDYDVIVLGT-GLKECILSGVLSVDG-LKVLHMDRNAY 38 (445)
Q Consensus 1 m~~~~DViIIGa-Gl~Gl~aA~~La~~G-~~VlvlE~n~~ 38 (445)
|.....|+|.|+ |..|..++..|.++| ++|..+.|+..
T Consensus 2 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~ 41 (299)
T 2wm3_A 2 MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR 41 (299)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCC
Confidence 544456999998 999999999999999 99999998753
Done!